Pregenerated sensors for SIGLECH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051504Ensembl transcript IDs: ENSMUST00000060416.15, ENSMUST00000094360.13, ENSMUST00000121492.8, ENSMUST00000154933.2, ENSMUST00000165045.9, ENSMUST00000171077.8, ENSMUST00000172988.8, ENSMUST00000173835.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACGACCAAGCTCCAGTGTCTGTGGGATGCTGATGTTGGGGCTGTaGGTGAGGTCTGTCACATGCACAGAGATCCTTTCCTCACAGAAA | + |
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Preference number: 1 (lower is better) Translates to: GRPSSSVCGMLMLGL*VRSVTCTEILSSQK Trigger: TTTCTGTGAGGAAAGGATCTCTGTGCATGTGACAGACCTCACTCACAGCCCCAACATCAGCATCCCACAGACACTGGAGCTTGGTCGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172988.8 |
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| 3UTR CCA 90 bp | GAGAGACTAATCCATGACAGCGTGTGCCTGATCCATGTGTGTTGCTaGTCTCTCCACTCTCTTCGTATGGGATCTCTTGCTGAGGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: ERLIHDSVCLIHVCC*SLHSLRMGSLAEEE Trigger: TTCTTCCTCAGCAAGAGATCCCATACGAAGAGAGTGGAGAGACCAGCAACACACATGGATCAGGCACACGCTGTCATGGATTAGTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
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| 3UTR TCA 90 bp | TTTCCCTGGACCAACTCTTCCAGAGACATGGGCTGTGGAGTTCTGTaGATTATAGGTGACATTGAGCTGGATAGTCTTTTGAACAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: FPWTNSSRDMGCGVL*IIGDIELDSLLNSH Trigger: GTGACTGTTCAAAAGACTATCCAGCTCAATGTCACCTATAATTCACAGAACTCCACAGCCCATGTCTCTGGAAGAGTTGGTCCAGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
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| 3UTR GCA 90 bp | AGTGGAAACTCTCTTGTTTCTGGTAACCAAGGGGCCCAGCTTCAGTaGAGGAATAGAATGATAAACACTGCATTTCTATCTCAAAAGATA | + |
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Preference number: 1 (lower is better) Translates to: SGNSLVSGNQGAQLQ*RNRMINTAFLSQKI Trigger: TATCTTTTGAGATAGAAATGCAGTGTTTATCATTCTATTCCTGCACTGAAGCTGGGCCCCTTGGTTACCAGAAACAAGAGAGTTTCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR CCA 90 bp | AAACTCCCATATCTTTGCTTTTTAAATGCAACCAAACACTTAAAGTaGGCATCAGTGAGCAGAGATCAAGATGATTATGGGTTAGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: KLPYLCFLNATKHLK*ASVSRDQDDYGLVV Trigger: AACCACTAACCCATAATCATCTTGATCTCTGCTCACTGATGCCCACTTTAAGTGTTTGGTTGCATTTAAAAAGCAAAGATATGGGAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR CCA 90 bp | AAGCTTTTAATACCTACAAGGCCTGATCAATCTGTCTACTTAGTTTaGAAAGCATCAGAAGAGGCACTTTTAGTCAAACCATTAGTACAC | + |
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Preference number: 1 (lower is better) Translates to: KLLIPTRPDQSVYLV*KASEEALLVKPLVH Trigger: GTGTACTAATGGTTTGACTAAAAGTGCCTCTTCTGATGCTTTCCAAACTAAGTAGACAGATTGATCAGGCCTTGTAGGTATTAAAAGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR CCA 90 bp | AGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCTTCAACTTTaGAGGATGTCTCTGCAAGGGAATTTAACTGTTGTTTTAATTCAG | + |
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Preference number: 1 (lower is better) Translates to: SFLYLRRTKSKPLQL*RMSLQGNLTVVLIQ Trigger: CTGAATTAAAACAACAGTTAAATTCCCTTGCAGAGACATCCTCCAAAGTTGAAGAGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR CAA 90 bp | GGCTCTGAGACCCCCAGTGTCTCAGGGTCTGGTCTCTGTGGAATCTaGATGGAACCTCCAGAAATGTTGGGAGGAATCCACCAGGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: GSETPSVSGSGLCGI*MEPPEMLGGIHQGR Trigger: TCTTCCCTGGTGGATTCCTCCCAACATTTCTGGAGGTTCCATCAAGATTCCACAGAGACCAGACCCTGAGACACTGGGGGTCTCAGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCTTGGTTTCCCTGGACCAACTCTTCCAGAGACATGGGCTGTGGAGTTCTGTTACCTGTACCACATCTaGCAGGGGTCTTGGTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GLGFPGPTLPETWAVEFCYLYHI*QGSWFP Trigger: GGGAAACCAAGACCCCTGGCAGATGTGGTACAGGTA...ACAGAACTCCACAGCCCATGTCTCTGGAAGAGTTGGTCCAGGGAAACCAAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154933.2 ENSMUST00000172988.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCTTGGTTTCCCTGGACCAACTCTTCCAGAGACATGGGCTGTGGAGTTCTGTGGGTCTTGGTTTCCCTaGACCAACTCTTCCAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: GLGFPGPTLPETWAVEFCGSWFP*TNSSRD Trigger: GTCTCTGGAAGAGTTGGTCCAGGGAAACCAAGACCC...ACAGAACTCCACAGCCCATGTCTCTGGAAGAGTTGGTCCAGGGAAACCAAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154933.2 ENSMUST00000172988.8 |
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| 3UTR CAA 90 bp | TCTGGAGACAGTCCAGTTGGCACCATCATCCATGACTTTCTTGACTaGAGAGTGGTGGATCCCTGGTGTAATGCCAGCCATCTTCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: SGDSPVGTIIHDFLD*RVVDPWCNASHLHS Trigger: GCTGTGAAGATGGCTGGCATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGATGATGGTGCCAACTGGACTGTCTCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 ENSMUST00000173835.2 |
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| 3UTR CAA 90 bp | GATCTCTTGCTGAGGAAGAAGAAGCAGATCCCAAGAAGCAGGAATTaGATAGCCGCTTCTCCCATGGCTACCTGTACCACATCTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: DLLLRKKKQIPRSRN*IAASPMATCTTSAR Trigger: CCTGGCAGATGTGGTACAGGTAGCCATGGGAGAAGCGGCTATCAAATTCCTGCTTCTTGGGATCTGCTTCTTCTTCCTCAGCAAGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154933.2 ENSMUST00000172988.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTGTAGCATAGAGTCTGATTTTCCCAGGCTTTCCAAAGGCCAGAACCTTTTAAGTGAGGGTCAGCACTaGGGAGAGTGTGGTCGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SCSIESDFPRLSKGQNLLSEGQH*GECGRG Trigger: CCCACGACCACACTCTCCTCAGTGCTGACCCTCACT...TAAAAGGTTCTGGCCTTTGGAAAGCCTGGGAAAATCAGACTCTATGCTACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTGGACCAACTCTTCCAGAGACATGGGCTGTGGAGTTCTGTGAATTATCTCCTTTTGTGCATCTCTaGTGTCCAAGGAGCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: FPGPTLPETWAVEFCELSPFVHL*CPRSSP Trigger: GGGACTGCTCCTTGGACATCAGAGATGCACAAAAGG...AGATAATTCACAGAACTCCACAGCCCATGTCTCTGGAAGAGTTGGTCCAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172988.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGGCTGTGGGGGAGGGGCCACAACCCTATATTCATACCCATAGAATAAAAAGAGTGGTGGATCCCTaGTGTAATGCCAGCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: LRAVGEGPQPYIHTHRIKRVVDP*CNASHL Trigger: AAGATGGCTGGCATTACACCAGGGATCCACCACTCT...TTTTATTCTATGGGTATGAATATAGGGTTGTGGCCCCTCCCCCACAGCCCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTGTTTCTGGTAACCAAGGGGCCCAGCTTCAGTGCAGGAATAGAATGATATTGGTTCCATGGTCTTaGAGCCTGGGAGTGAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: SLVSGNQGAQLQCRNRMILVPWS*SLGVRV Trigger: GACCCTCACTCCCAGGCTCCAAGACCATGGAACCAA...TATCATTCTATTCCTGCACTGAAGCTGGGCCCCTTGGTTACCAGAAACAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTCTGGTCTCTGTGGAATCTTGATGGAACCTCCAGAAATGTTGGGAGGAATGCAAGGGAGAGTCAGTaGGTATGGGAAGATGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: RVWSLWNLDGTSRNVGRNARESQ*VWEDEV Trigger: AACCTCATCTTCCCATACTCACTGACTCTCCCTTGC...ATTCCTCCCAACATTTCTGGAGGTTCCATCAAGATTCCACAGAGACCAGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCTGGTCTCTGTGGAATCTTGATGGAACCTCCAGAAATGTTGGGAGGAATGGTCAGTATAGGTCATaGGGTGAGGGTGAAGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RVWSLWNLDGTSRNVGRNGQYRS*GEGEES Trigger: ACTCTCTTCACCCTCACCCCATGACCTATACTGACC...ATTCCTCCCAACATTTCTGGAGGTTCCATCAAGATTCCACAGAGACCAGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTGCTGAGGAAGAAGAAGCAGATCCCAAGAAGCAGGAATTTGATAGCCGCTATGACTTTCTTGACTTaGGAGTGGTGGATCCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LLLRKKKQIPRSRNLIAAMTFLT*EWWIPG Trigger: ACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCAT...AGCGGCTATCAAATTCCTGCTTCTTGGGATCTGCTTCTTCTTCCTCAGCAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCCAGCTTCAGTGCAGGAATAGAATGATAAACACTGCATTTCTATCTCAAAGAGTGGTGGATCCCTaGTGTAATGCCAGCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: GAQLQCRNRMINTAFLSQRVVDP*CNASHL Trigger: AAGATGGCTGGCATTACACCAGGGATCCACCACTCT...TTGAGATAGAAATGCAGTGTTTATCATTCTATTCCTGCACTGAAGCTGGGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTGTTTCTGGTAACCAAGGGGCCCAGCTTCAGTGCAGGAATAGAATGATAAGTTTTGTCAGTCTATaGGAGGACAGTGTGGTTCGC | + |
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Preference number: 2 (lower is better) Translates to: SLVSGNQGAQLQCRNRMISFVSL*EDSVVR Trigger: GCGAACCACACTGTCCTCCCATAGACTGACAAAACT...TATCATTCTATTCCTGCACTGAAGCTGGGCCCCTTGGTTACCAGAAACAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGAGGAAGAAGAAGCAGATCCCAAGAAGCAGGAATTTGATAGCCGCTTCTACTCTTCCAGAGACATaGGCTGTGGAGTTCTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: LLRKKKQIPRSRNLIAASTLPET*AVEFCE Trigger: TTCACAGAACTCCACAGCCCATGTCTCTGGAAGAGT...AGAAGCGGCTATCAAATTCCTGCTTCTTGGGATCTGCTTCTTCTTCCTCAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154933.2 ENSMUST00000172988.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTGTTTCTGGTAACCAAGGGGCCCAGCTTCAGTGCAGGAATAGAATGATAATCCATGTGTGTTGCTaGTCTCTCCACTCTCTTCGT | + |
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Preference number: 2 (lower is better) Translates to: SLVSGNQGAQLQCRNRMIIHVCC*SLHSLR Trigger: ACGAAGAGAGTGGAGAGACCAGCAACACACATGGAT...TATCATTCTATTCCTGCACTGAAGCTGGGCCCCTTGGTTACCAGAAACAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
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| 3UTR CAA 90 bp | GGAAGCCTTAGTCTCATAACACCAATTTTTGCAGTGGAAACTCTCTaGTTTCTGGTAACCAAGGGGCCCAGCTTCAGTGCAGGAATAGAA | + |
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Preference number: 2 (lower is better) Translates to: GSLSLITPIFAVETL*FLVTKGPSFSAGIE Trigger: TTCTATTCCTGCACTGAAGCTGGGCCCCTTGGTTACCAGAAACAAGAGAGTTTCCACTGCAAAAATTGGTGTTATGAGACTAAGGCTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR TCA 90 bp | CGTATGGGATCTCTTGCTGAGGAAGAAGAAGCAGATCCCAAGAAGCAGGAATTTGAATTATCTGACAGGTaGGGTTGGTTCCATGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: RMGSLAEEEEADPKKQEFELSDR*GWFHGL Trigger: AAGACCATGGAACCAACCTCACCTGTCAGATAATTC...AAATTCCTGCTTCTTGGGATCTGCTTCTTCTTCCTCAGCAAGAGATCCCATACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172988.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCGTCAGAAGCAGGACTACAGAAGCCAAAAGACCAGGTTAGTATCTTTAAAGGTTACAGAGGCAGGATaGAAGGGAGAGTCAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: VRQKQDYRSQKTRLVSLKVTEAG*KGESVS Trigger: ACTCACTGACTCTCCCTTGCATCCTGCCTCTGTAAC...CTTTAAAGATACTAACCTGGTCTTTTGGCTTCTGTAGTCCTGCTTCTGACGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| 3UTR-3UTR CCA 90 bp | CTCACAGAAATTCCATGTTTTGCCTCCTTTTTCCAGTCTGAAGAAGTAAGAACCAAGCTCCAGTGTCTGTaGGATGCTGATGTTGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LTEIPCFASFFQSEEVRTKLQCL*DADVGA Trigger: AGCCCCAACATCAGCATCCCACAGACACTGGAGCTT...GGTTCTTACTTCTTCAGACTGGAAAAAGGAGGCAAAACATGGAATTTCTGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172988.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTCGTCAGAAGCAGGACTACAGAAGCCAAAAGACCAGGTTAGTATCTTTAAAGCAAGGGAGAGTCAGTaGGTATGGGAAGATGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SSSEAGLQKPKDQVSIFKARESQ*VWEDEV Trigger: AACCTCATCTTCCCATACTCACTGACTCTCCCTTGC...TTTAAAGATACTAACCTGGTCTTTTGGCTTCTGTAGTCCTGCTTCTGACGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGACTAAAATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCAGAGTGGTGGATCCCTaGTGTAATGCCAGCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: ARLKFHFNRSGDSPVGTIRVVDP*CNASHL Trigger: AAGATGGCTGGCATTACACCAGGGATCCACCACTCT...GATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATTTTAGTCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 ENSMUST00000173835.2 |
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| 3UTR-3UTR CCA 90 bp | GATTCTGTTCCTTCCTGTAGCATAGAGTCTGATTTTCCCAGGCTTTCCAAAGGCACCAAACACTTAAAGTaGGCATCAGTGAGCAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: DSVPSCSIESDFPRLSKGTKHLK*ASVSRD Trigger: ATCTCTGCTCACTGATGCCCACTTTAAGTGTTTGGT...GCCTTTGGAAAGCCTGGGAAAATCAGACTCTATGCTACAGGAAGGAACAGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGATGGAACCTCCAGAAATGTTGGGAGGAATCCACCAGGGAAGACTGTTCACTGTTTTCATTTTGGCTaGTGTAACTGTTTATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LDGTSRNVGRNPPGKTVHCFHFG*CNCLCA Trigger: AGCACATAAACAGTTACACCAGCCAAAATGAAAACA...GTGAACAGTCTTCCCTGGTGGATTCCTCCCAACATTTCTGGAGGTTCCATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| 3UTR-3UTR TCA 90 bp | CTAAAATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATATGACTTTCTTGACTTaGGAGTGGTGGATCCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LKFHFNRSGDSPVGTIIHMTFLT*EWWIPG Trigger: ACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCAT...ATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 ENSMUST00000173835.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCAAAGCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTGTTAGCCCACAAGGCTaGAGGACAGGCATCAGAATA | + |
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Preference number: 2 (lower is better) Translates to: SFKAIHSFLYLRRTKSKPVSPQG*RTGIRI Trigger: TATTCTGATGCCTGTCCTTCAGCCTTGTGGGCTAAC...AGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGCTTTGAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCTTCAACGATAACCAGCAATCCTaGCTGATTTTTGCCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: KPYIVSFISGELSQSLFNDNQQS*LIFAWE Trigger: TTCCCAGGCAAAAATCAGTCAGGATTGCTGGTTATC...GTTGAAGAGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTGCTTTTTAAATGCAACCAAACACTTAAAGTGGGCATCAGTGAGCAGAGATGGCTGTGGAGTTCTGTaGATTATAGGTGACATTGAG | + |
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Preference number: 2 (lower is better) Translates to: LCFLNATKHLKWASVSRDGCGVL*IIGDIE Trigger: CTCAATGTCACCTATAATTCACAGAACTCCACAGCC...ATCTCTGCTCACTGATGCCCACTTTAAGTGTTTGGTTGCATTTAAAAAGCAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTGTTTCTGGTAACCAAGGGGCCCAGCTTCAGTGCAGGAATAGAATGATAATCCTGACTGATTTTTaGCTGGGAATAATTAACTCT | + |
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Preference number: 2 (lower is better) Translates to: SLVSGNQGAQLQCRNRMIILTDF*LGIINS Trigger: AGAGTTAATTATTCCCAGGCAAAAATCAGTCAGGAT...TATCATTCTATTCCTGCACTGAAGCTGGGCCCCTTGGTTACCAGAAACAAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTGCTTTTTAAATGCAACCAAACACTTAAAGTGGGCATCAGTGAGCAGAGATTATGGGAGGACAGTGTaGTTCGCTCTTATCCTATGT | + |
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Preference number: 2 (lower is better) Translates to: LCFLNATKHLKWASVSRDYGRTV*FALILC Trigger: ACATAGGATAAGAGCGAACCACACTGTCCTCCCATA...ATCTCTGCTCACTGATGCCCACTTTAAGTGTTTGGTTGCATTTAAAAAGCAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCTTCAACTATGGGAGGACAGTGTaGTTCGCTCTTATCCTATGT | + |
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Preference number: 2 (lower is better) Translates to: KPYIVSFISGELSQSLFNYGRTV*FALILC Trigger: ACATAGGATAAGAGCGAACCACACTGTCCTCCCATA...GTTGAAGAGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR CCA 90 bp | GCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCTTCAACTTTCTCTAATGTTAATTTaGGCTGCCCCAGTCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: AIHSFLYLRRTKSKPLQLSLMLI*AAPVTV Trigger: CACTGTGACTGGGGCAGCCCAAATTAACATTAGAGA...AAGTTGAAGAGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCGTCAGAAGCAGGACTACAGAAGCCAAAAGACCAGGTTAGTATCTTTAAAGCAGAACTATGGACTTTaGTGGATTAGGTCTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: VRQKQDYRSQKTRLVSLKQNYGL*WIRSLF Trigger: AAACAAAGACCTAATCCATCAAAGTCCATAGTTCTG...CTTTAAAGATACTAACCTGGTCTTTTGGCTTCTGTAGTCCTGCTTCTGACGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAAATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATACCAAACACTTAAAGTaGGCATCAGTGAGCAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: LKFHFNRSGDSPVGTIIHTKHLK*ASVSRD Trigger: ATCTCTGCTCACTGATGCCCACTTTAAGTGTTTGGT...ATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTTTCTTTCAAAGCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCATATGGGAGGACAGTGTaGTTCGCTCTTATCCTATGT | + |
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Preference number: 2 (lower is better) Translates to: QVSFKAIHSFLYLRRTKSYGRTV*FALILC Trigger: ACATAGGATAAGAGCGAACCACACTGTCCTCCCATA...TGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGCTTTGAAAGAAACCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCTTCGAGCAGAGATCAAGATaGTTATGGGTTAGTGGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: SKPYIVSFISGELSQSLFEQRSR*LWVSGL Trigger: TAAACCACTAACCCATAATCATCTTGATCTCTGCTC...GAAGAGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGCTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACTAAAATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCGAGCAGAGATCAAGATaGTTATGGGTTAGTGGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: RLKFHFNRSGDSPVGTIIEQRSR*LWVSGL Trigger: TAAACCACTAACCCATAATCATCTTGATCTCTGCTC...GATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATTTTAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTCAAAGCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTAATACCTACAAGGCCTaGTCAATCTGTCTACTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: SFKAIHSFLYLRRTKSKPNTYKA*SICLLS Trigger: ACTAAGTAGACAGATTGATCAGGCCTTGTAGGTATT...AGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGCTTTGAAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAGCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCTTCATCCTGACTGATTTTTaGCTGGGAATAATTAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: SKPYIVSFISGELSQSLFILTDF*LGIINS Trigger: AGAGTTAATTATTCCCAGGCAAAAATCAGTCAGGAT...GAAGAGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGCTTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| 3UTR CAA 90 bp | CTGAAGGACAGGCATCAGAATAAGGAAGTGTGTAGCTTGAAGGTTTaGGATATTAGACACATTTTAGTCTCTTGTAAATTCTCTAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: LKDRHQNKEVCSLKV*DIRHILVSCKFSNV Trigger: AACATTAGAGAATTTACAAGAGACTAAAATGTGTCTAATATCCAAAACCTTCAAGCTACACACTTCCTTATTCTGATGCCTGTCCTTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGCACAGAGCACATCACATTGGTAGGACGACCAAGCTCCAGTGTCTGTGGGACAGAGCACATCACATaGGTAGGACGACCAAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QGTEHITLVGRPSSSVCGTEHIT*VGRPSS Trigger: GGAGCTTGGTCGTCCTACCAATGTGATGTGCTCTGT...CCCACAGACACTGGAGCTTGGTCGTCCTACCAATGTGATGTGCTCTGTGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154933.2 ENSMUST00000172988.8 |
||
| 3UTR TCA 72 bp | GCCAGGCCATACTGGGTCCACCACAGGGAAGAGCCCTaGAGCACATCAAATGCTGGGATCCCATATCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: ARPYWVHHREEP*STSNAGIPYHS Trigger: TGAGTGATATGGGATCCCAGCATTTGATGTGCTTCAGGGCTCTTCCCTGTGGTGGACCCAGTATGGCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| 3UTR TCA 72 bp | AGCTCCAGTGTCTGTGGGATGCTGATGTTGGGGCTGTaGGTGAGGTCTGTCACATGCACAGAGATCCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSSVCGMLMLGL*VRSVTCTEILS Trigger: GGAAAGGATCTCTGTGCATGTGACAGACCTCACTCACAGCCCCAACATCAGCATCCCACAGACACTGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172988.8 |
||
| 3UTR CCA 72 bp | CATCACATTGGTAGGACGACCAAGCTCCAGTGTCTGTaGGATGCTGATGTTGGGGCTGTGAGTGAGGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HHIGRTTKLQCL*DADVGAVSEVC Trigger: ACAGACCTCACTCACAGCCCCAACATCAGCATCCCACAGACACTGGAGCTTGGTCGTCCTACCAATGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172988.8 |
||
| 3UTR GCA 72 bp | TCTTCACAGCCTGAGAGACTAATCCATGACAGCGTGTaGCTGATCCATGTGTGTTGCTGGTCTCTCCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSQPERLIHDSV*LIHVCCWSLHS Trigger: AGAGTGGAGAGACCAGCAACACACATGGATCAGGCACACGCTGTCATGGATTAGTCTCTCAGGCTGTGAAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGGGCTGTGGGGGAGGGGCCACAACCCTATATTCATACCCATAGAATAAAACATGACTTTCTTGACTaGAGAGTGGTGGATCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LRAVGEGPQPYIHTHRIKHDFLD*RVVDPW Trigger: CCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATG...TTTTATTCTATGGGTATGAATATAGGGTTGTGGCCCCTCCCCCACAGCCCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| 3UTR CCA 72 bp | ATCCATGACTTTCTTGACTTGAGAGTGGTGGATCCCTaGTGTAATGCCAGCCATCTTCACAGCCTGAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: IHDFLDLRVVDP*CNASHLHSLRD Trigger: GTCTCTCAGGCTGTGAAGATGGCTGGCATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
||
| 3UTR CCA 72 bp | GTTTCCCTGGACCAACTCTTCCAGAGACATGGGCTGTaGAGTTCTGTGAATTATCTGACAGGTGAGGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VSLDQLFQRHGL*SSVNYLTGEVG Trigger: ACCAACCTCACCTGTCAGATAATTCACAGAACTCCACAGCCCATGTCTCTGGAAGAGTTGGTCCAGGGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172988.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTGCTGAGGAAGAAGAAGCAGATCCCAAGAAGCAGGAATTTGATAGCCGCTGCAGTGGAAACTCTCTaGTTTCTGGTAACCAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLLRKKKQIPRSRNLIAAAVETL*FLVTKG Trigger: CCCCTTGGTTACCAGAAACAAGAGAGTTTCCACTGC...AGCGGCTATCAAATTCCTGCTTCTTGGGATCTGCTTCTTCTTCCTCAGCAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
||
| 3UTR TCA 72 bp | CTGGTCTCTCCACTCTCTTCGTATGGGATCTCTTGCTaGGGAAGAAGAAGCAGATCCCAAGAAGCAGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: LVSPLSSYGISC*GRRSRSQEAGI Trigger: AATTCCTGCTTCTTGGGATCTGCTTCTTCTTCCTCAGCAAGAGATCCCATACGAAGAGAGTGGAGAGACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
||
| 3UTR TCA 72 bp | AGAAGTAAGAACCGTTGTCACCCTTTTGTGCATCTCTaGTGTCCAAGGAGCAGTCCCCAGAGAAGTGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: RSKNRCHPFVHL*CPRSSPQRSGI Trigger: GATTCCACTTCTCTGGGGACTGCTCCTTGGACATCAGAGATGCACAAAAGGGTGACAACGGTTCTTACTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172988.8 |
||
| 3UTR GCA 72 bp | CAGTCTGAAGAAGTAAGAACCGTTGTCACCCTTTTGTaGATCTCTGATGTCCAAGGAGCAGTCCCCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QSEEVRTVVTLL*ISDVQGAVPRE Trigger: TTCTCTGGGGACTGCTCCTTGGACATCAGAGATGCACAAAAGGGTGACAACGGTTCTTACTTCTTCAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172988.8 |
||
| 3UTR CCA 72 bp | AATTATATTAGCTGGCTGGCAACTGCACTGGGTGTGTaGCATCCCAATGGAGCAATCAAACCTTTCTCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: NYISWLATALGV*HPNGAIKPFSA Trigger: TGCCGAGAAAGGTTTGATTGCTCCATTGGGATGCCACACACCCAGTGCAGTTGCCAGCCAGCTAATATAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCAAGGGGCCCAGCTTCAGTGCAGGAATAGAATGATAAACACTGCATTTCTACATGACTTTCTTGACTaGAGAGTGGTGGATCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NQGAQLQCRNRMINTAFLHDFLD*RVVDPW Trigger: CCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATG...TAGAAATGCAGTGTTTATCATTCTATTCCTGCACTGAAGCTGGGCCCCTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCCCAGCTTCAGTGCAGGAATAGAATGATAAACACTGCATTTCTATCTCAACATGACTTTCTTGACTaGAGAGTGGTGGATCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GAQLQCRNRMINTAFLSQHDFLD*RVVDPW Trigger: CCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATG...TTGAGATAGAAATGCAGTGTTTATCATTCTATTCCTGCACTGAAGCTGGGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| 3UTR TCA 72 bp | AGAATCACAGTCAGTTCTAGAAAGAAATGGAACCGCTaGTCCAGGAGATCATGGGACACAATAGCGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RITVSSRKKWNR*SRRSWDTIAMW Trigger: CCACATCGCTATTGTGTCCCATGATCTCCTGGATCAGCGGTTCCATTTCTTTCTAGAACTGACTGTGATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| 3UTR TCA 72 bp | GAGTTTTATGGCCTGAATAGTACTCCCATTATGGAATaGGTGGTGCTAAGGTCTGGAGGCCTCCTAAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: EFYGLNSTPIME*VVLRSGGLLRS Trigger: AGATCTTAGGAGGCCTCCAGACCTTAGCACCACTCATTCCATAATGGGAGTACTATTCAGGCCATAAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| 3UTR TCA 72 bp | ACCAACTCTTCCAGAGACATGGGCTGTGGAGTTCTGTaGATTATAGGTGACATTGAGCTGGATAGTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TNSSRDMGCGVL*IIGDIELDSLL Trigger: CAAAAGACTATCCAGCTCAATGTCACCTATAATTCACAGAACTCCACAGCCCATGTCTCTGGAAGAGTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCTTCAACTTGCAGTGGAAACTCTCTaGTTTCTGGTAACCAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AIHSFLYLRRTKSKPLQLAVETL*FLVTKG Trigger: CCCCTTGGTTACCAGAAACAAGAGAGTTTCCACTGC...AAGTTGAAGAGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| 3UTR GCA 72 bp | TCTCTTGTTTCTGGTAACCAAGGGGCCCAGCTTCAGTaGAGGAATAGAATGATAAACACTGCATTTCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: SLVSGNQGAQLQ*RNRMINTAFLS Trigger: AGATAGAAATGCAGTGTTTATCATTCTATTCCTGCACTGAAGCTGGGCCCCTTGGTTACCAGAAACAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| 3UTR CCA 72 bp | AATATAAAAATTATATTAGCTGGCTGGCAACTGCACTaGGTGTGTGGCATCCCAATGGAGCAATCAAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: NIKIILAGWQLH*VCGIPMEQSNL Trigger: AAGGTTTGATTGCTCCATTGGGATGCCACACACCCAGTGCAGTTGCCAGCCAGCTAATATAATTTTTATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| 3UTR CCA 72 bp | CACACTGGATTAATCCAATATAAAAATTATATTAGCTaGCTGGCAACTGCACTGGGTGTGTGGCATCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: HTGLIQYKNYIS*LATALGVWHPN Trigger: ATTGGGATGCCACACACCCAGTGCAGTTGCCAGCCAGCTAATATAATTTTTATATTGGATTAATCCAGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| 3UTR CCA 72 bp | ATACCTACAAGGCCTGATCAATCTGTCTACTTAGTTTaGAAAGCATCAGAAGAGGCACTTTTAGTCAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: IPTRPDQSVYLV*KASEEALLVKP Trigger: TGGTTTGACTAAAAGTGCCTCTTCTGATGCTTTCCAAACTAAGTAGACAGATTGATCAGGCCTTGTAGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| 3UTR CCA 72 bp | TATCTCAGGAGAACTAAGTCAAAGCCTCTTCAACTTTaGAGGATGTCTCTGCAAGGGAATTTAACTGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: YLRRTKSKPLQL*RMSLQGNLTVV Trigger: AACAACAGTTAAATTCCCTTGCAGAGACATCCTCCAAAGTTGAAGAGGCTTTGACTTAGTTCTCCTGAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| 3UTR TCA 72 bp | AATTCAGAAGCAGAAGCTTTTAATACCTACAAGGCCTaGTCAATCTGTCTACTTAGTTTGGAAAGCATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NSEAEAFNTYKA*SICLLSLESIR Trigger: TCTGATGCTTTCCAAACTAAGTAGACAGATTGATCAGGCCTTGTAGGTATTAAAAGCTTCTGCTTCTGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAGCCCTGTTACAGAGGCAGGATGCAAGGGAGAGTCAGTGAGTATGGGAAGAGTGAGGGTCAGCACTaGGGAGAGTGTGGTCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEPCYRGRMQGRVSEYGKSEGQH*GECGRG Trigger: CCCACGACCACACTCTCCTCAGTGCTGACCCTCACT...CTTCCCATACTCACTGACTCTCCCTTGCATCCTGCCTCTGTAACAGGGCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171077.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAGCCCTGTTACAGAGGCAGGATGCAAGGGAGAGTCAGTGAGTATGGGAAGCTGATGTTGGGGCTGTaGGTGAGGTCTGTCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: LEPCYRGRMQGRVSEYGKLMLGL*VRSVTC Trigger: GCATGTGACAGACCTCACTCACAGCCCCAACATCAG...CTTCCCATACTCACTGACTCTCCCTTGCATCCTGCCTCTGTAACAGGGCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171077.8 |
||
| CDS-3UTR CCA 90 bp | CATACTGGGTCCACCACAGGGAAGAGCCCTGAAGCACATCAAATGCTGGGATCCTTGGTTCCATGGTCTTaGAGCCTGGGAGTGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HTGSTTGKSPEAHQMLGSLVPWS*SLGVRV Trigger: GACCCTCACTCCCAGGCTCCAAGACCATGGAACCAA...GGATCCCAGCATTTGATGTGCTTCAGGGCTCTTCCCTGTGGTGGACCCAGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171077.8 |
||
| CDS-3UTR TCA 90 bp | GTGGATTCACAGGAGGGTAAGCAGATAGCCAGTGGCCATGCTAAGCCAGGCCATATGACAGCGTGTGCCTaGTCCATGTGTGTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VDSQEGKQIASGHAKPGHMTACA*SMCVAG Trigger: ACCAGCAACACACATGGATCAGGCACACGCTGTCAT...ATGGCCTGGCTTAGCATGGCCACTGGCTATCTGCTTACCCTCCTGTGAATCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCACCACAGGGAAGAGCCCTGAAGCACATCAAATGCTGGGATCCCATATCACCTTTTGTGCATCTCTaGTGTCCAAGGAGCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPPQGRALKHIKCWDPISPFVHL*CPRSSP Trigger: GGGACTGCTCCTTGGACATCAGAGATGCACAAAAGG...TGATATGGGATCCCAGCATTTGATGTGCTTCAGGGCTCTTCCCTGTGGTGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGTTACAGAGGCAGGATGCAAGGGAGAGTCAGTGAGTATGGGAAGATGAGGTACCTGTACCACATCTaGCAGGGGTCTTGGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PCYRGRMQGRVSEYGKMRYLYHI*QGSWFP Trigger: GGGAAACCAAGACCCCTGGCAGATGTGGTACAGGTA...CCTCATCTTCCCATACTCACTGACTCTCCCTTGCATCCTGCCTCTGTAACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR CCA 90 bp | ATCCATCTTTCTCAGTTACTAACTAGTTCCAGGCCTGAGGGCTGTGGGGGAGGGAAGCTCCAGTGTCTGTaGGATGCTGATGTTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHLSQLLTSSRPEGCGGGKLQCL*DADVGA Trigger: AGCCCCAACATCAGCATCCCACAGACACTGGAGCTT...CCCTCCCCCACAGCCCTCAGGCCTGGAACTAGTTAGTAACTGAGAAAGATGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
||
| CDS-3UTR CCA 90 bp | CCCTGTTACAGAGGCAGGATGCAAGGGAGAGTCAGTGAGTATGGGAAGATGAGGAAGCTCCAGTGTCTGTaGGATGCTGATGTTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCYRGRMQGRVSEYGKMRKLQCL*DADVGA Trigger: AGCCCCAACATCAGCATCCCACAGACACTGGAGCTT...CCTCATCTTCCCATACTCACTGACTCTCCCTTGCATCCTGCCTCTGTAACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171077.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTAAGCCAGGCCATACTGGGTCCACCACAGGGAAGAGCCCTGAAGCACATCATCCATGTGTGTTGCTaGTCTCTCCACTCTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: MLSQAILGPPQGRALKHIIHVCC*SLHSLR Trigger: ACGAAGAGAGTGGAGAGACCAGCAACACACATGGAT...GATGTGCTTCAGGGCTCTTCCCTGTGGTGGACCCAGTATGGCCTGGCTTAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTTGTTTCTGGTAACCAAGGGGCCCAGCTTCAGTGCAGGAATAGAATGATAAGTGAGGGTCAGCACTaGGGAGAGTGTGGTCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLVSGNQGAQLQCRNRMISEGQH*GECGRG Trigger: CCCACGACCACACTCTCCTCAGTGCTGACCCTCACT...TATCATTCTATTCCTGCACTGAAGCTGGGCCCCTTGGTTACCAGAAACAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
||
| CDS-3UTR TCA 90 bp | CTGGAGCCCTGTTACAGAGGCAGGATGCAAGGGAGAGTCAGTGAGTATGGGAAGTATGGGATCTCTTGCTaGGGAAGAAGAAGCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LEPCYRGRMQGRVSEYGKYGISC*GRRSRS Trigger: GGATCTGCTTCTTCTTCCTCAGCAAGAGATCCCATA...CTTCCCATACTCACTGACTCTCCCTTGCATCCTGCCTCTGTAACAGGGCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCCTGTTACAGAGGCAGGATGCAAGGGAGAGTCAGTGAGTATGGGAAGATGACTCTTCCAGAGACATaGGCTGTGGAGTTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPCYRGRMQGRVSEYGKMTLPET*AVEFCE Trigger: TTCACAGAACTCCACAGCCCATGTCTCTGGAAGAGT...CATCTTCCCATACTCACTGACTCTCCCTTGCATCCTGCCTCTGTAACAGGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCACCACAGGGAAGAGCCCTGAAGCACATCAAATGCTGGGATCCCATATCATCCACTCTCTTCGTATaGGATCTCTTGCTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPPQGRALKHIKCWDPISSTLFV*DLLLRK Trigger: CTTCCTCAGCAAGAGATCCCATACGAAGAGAGTGGA...TGATATGGGATCCCAGCATTTGATGTGCTTCAGGGCTCTTCCCTGTGGTGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAGCCCTGTTACAGAGGCAGGATGCAAGGGAGAGTCAGTGAGTATGGGAAGCAGAGACATGGGCTGTaGAGTTCTGTGAATTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEPCYRGRMQGRVSEYGKQRHGL*SSVNYL Trigger: CAGATAATTCACAGAACTCCACAGCCCATGTCTCTG...CTTCCCATACTCACTGACTCTCCCTTGCATCCTGCCTCTGTAACAGGGCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121492.8 |
||
| 3UTR CAA 72 bp | GTTGCTGGTCTCTCCACTCTCTTCGTATGGGATCTCTaGCTGAGGAAGAAGAAGCAGATCCCAAGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VAGLSTLFVWDL*LRKKKQIPRSR Trigger: CCTGCTTCTTGGGATCTGCTTCTTCTTCCTCAGCAAGAGATCCCATACGAAGAGAGTGGAGAGACCAGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
||
| CDS-3UTR TCA 90 bp | GGCACCATCATCCATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGTGTAATATGACAGCGTGTGCCTaGTCCATGTGTGTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTIIHDFLDLRVVDPWCNMTACA*SMCVAG Trigger: ACCAGCAACACACATGGATCAGGCACACGCTGTCAT...ATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGATGATGGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
||
| CDS-3UTR GCA 90 bp | ATCATCCATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGTGTAATGCCAGCTACCTGTACCACATCTaGCAGGGGTCTTGGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IIHDFLDLRVVDPWCNASYLYHI*QGSWFP Trigger: GGGAAACCAAGACCCCTGGCAGATGTGGTACAGGTA...GCTGGCATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000173835.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCACCACAGGGAAGAGCCCTGAAGCACATCAAATGCTGGGATCCCATATCACAGAGACATGGGCTGTaGAGTTCTGTGAATTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPPQGRALKHIKCWDPISQRHGL*SSVNYR Trigger: CCTATAATTCACAGAACTCCACAGCCCATGTCTCTG...TGATATGGGATCCCAGCATTTGATGTGCTTCAGGGCTCTTCCCTGTGGTGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171077.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAAGGGAGAGTCAGTGAGTATGGGAAGATGAGGTTCGGGGATGATCAAGATGGGTCTTGGTTTCCCTaGACCAACTCTTCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MQGRVSEYGKMRFGDDQDGSWFP*TNSSRD Trigger: GTCTCTGGAAGAGTTGGTCCAGGGAAACCAAGACCC...ATCTTGATCATCCCCGAACCTCATCTTCCCATACTCACTGACTCTCCCTTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| CDS-3UTR CCA 90 bp | GATTGGGTGAATAAAGGGGTCAGTATAGGTCATGGGGTGAGGGTGAAGAGAGTTGGGTCTTGGTTTCCCTaGACCAACTCTTCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DWVNKGVSIGHGVRVKRVGSWFP*TNSSRD Trigger: GTCTCTGGAAGAGTTGGTCCAGGGAAACCAAGACCC...AACTCTCTTCACCCTCACCCCATGACCTATACTGACCCCTTTATTCACCCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTTGGCACCATCATCCATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGTCCACTCTCTTCGTATaGGATCTCTTGCTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVGTIIHDFLDLRVVDPWSTLFV*DLLLRK Trigger: CTTCCTCAGCAAGAGATCCCATACGAAGAGAGTGGA...CCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGATGATGGTGCCAACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
||
| 3UTR CAA 72 bp | CTGAGGAAGAAGAAGCAGATCCCAAGAAGCAGGAATTaGATAGCCGCTTCTCCCATGGCTACCTGTACCACA | + |
|
Preference number: 4 (lower is better) Translates to: LRKKKQIPRSRN*IAASPMATCTT Trigger: TGTGGTACAGGTAGCCATGGGAGAAGCGGCTATCAAATTCCTGCTTCTTGGGATCTGCTTCTTCTTCCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154933.2 ENSMUST00000172988.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGTAGCATAGAGTCTGATTTTCCCAGGCTTTCCAAAGGCCAGAACCTTTTATGTTGGGGCTGTGAGTaGGGTCTGTCACATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SCSIESDFPRLSKGQNLLCWGCE*GLSHAQ Trigger: CTGTGCATGTGACAGACCTCACTCACAGCCCCAACA...TAAAAGGTTCTGGCCTTTGGAAAGCCTGGGAAAATCAGACTCTATGCTACAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
||
| CDS-3UTR TCA 90 bp | AGAGCAAGACTAAAATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCAGTGAGGGTCAGCACTaGGGAGAGTGTGGTCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RARLKFHFNRSGDSPVGTSEGQH*GECGRG Trigger: CCCACGACCACACTCTCCTCAGTGCTGACCCTCACT...GGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATTTTAGTCTTGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
||
| CDS-3UTR GCA 90 bp | CTTGATGGAACCTCCAGAAATGTTGGGAGGAATCCACCAGGGAAGACTGTTCACAAGTGGAATCGGCTCTaGATCTCCTTCTGCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LDGTSRNVGRNPPGKTVHKWNRL*ISFCTS Trigger: ACTAGTGCAGAAGGAGATGCAGAGCCGATTCCACTT...GTGAACAGTCTTCCCTGGTGGATTCCTCCCAACATTTCTGGAGGTTCCATCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGGCTGTGGGGGAGGGGCCACAACCCTATATTCATACCCATAGAATAAAAGTGAGGTCTGTCACATaGACAGAGATCCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRAVGEGPQPYIHTHRIKVRSVT*TEILSS Trigger: TGAGGAAAGGATCTCTGTGCATGTGACAGACCTCAC...TTTTATTCTATGGGTATGAATATAGGGTTGTGGCCCCTCCCCCACAGCCCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
||
| CDS-3UTR TCA 90 bp | GTTCGTCAGAAGCAGGACTACAGAAGCCAAAAGACCAGGTTAGTATCTTTAAAGTGTTGGGGCTGTGAGTaGGGTCTGTCACATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VRQKQDYRSQKTRLVSLKCWGCE*GLSHAQ Trigger: CTGTGCATGTGACAGACCTCACTCACAGCCCCAACA...CTTTAAAGATACTAACCTGGTCTTTTGGCTTCTGTAGTCCTGCTTCTGACGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171077.8 |
||
| CDS-3UTR TCA 90 bp | ATCCATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGTGTAATGCCAGCCATTATGGGATCTCTTGCTaGGGAAGAAGAAGCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: IHDFLDLRVVDPWCNASHYGISC*GRRSRS Trigger: GGATCTGCTTCTTCTTCCTCAGCAAGAGATCCCATA...ATGGCTGGCATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
||
| CDS-3UTR TCA 90 bp | CATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGTGTAATGCCAGCCATCTTTATGGGATCTCTTGCTaGGGAAGAAGAAGCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: HDFLDLRVVDPWCNASHLYGISC*GRRSRS Trigger: GGATCTGCTTCTTCTTCCTCAGCAAGAGATCCCATA...AAGATGGCTGGCATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
||
| CDS-3UTR TCA 90 bp | GATTGGGTGAATAAAGGGGTCAGTATAGGTCATGGGGTGAGGGTGAAGAGAGTTTATGGGATCTCTTGCTaGGGAAGAAGAAGCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: DWVNKGVSIGHGVRVKRVYGISC*GRRSRS Trigger: GGATCTGCTTCTTCTTCCTCAGCAAGAGATCCCATA...AACTCTCTTCACCCTCACCCCATGACCTATACTGACCCCTTTATTCACCCAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR TCA 90 bp | GGCACCATCATCCATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGTGTAATTATGGGATCTCTTGCTaGGGAAGAAGAAGCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GTIIHDFLDLRVVDPWCNYGISC*GRRSRS Trigger: GGATCTGCTTCTTCTTCCTCAGCAAGAGATCCCATA...ATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGATGATGGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
||
| CDS-3UTR TCA 90 bp | ATGCAAGGGAGAGTCAGTGAGTATGGGAAGATGAGGTTCGGGGATGATCAAGATGGCTGTGGAGTTCTGTaGATTATCTGTCACATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MQGRVSEYGKMRFGDDQDGCGVL*IICHMH Trigger: GTGCATGTGACAGATAATTCACAGAACTCCACAGCC...ATCTTGATCATCCCCGAACCTCATCTTCCCATACTCACTGACTCTCCCTTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121492.8 |
||
| CDS-3UTR TCA 90 bp | ATCATCCATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGTGTAATGCCAGCGGCTGTGGAGTTCTGTaGATTATCTGTCACATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IIHDFLDLRVVDPWCNASGCGVL*IICHMH Trigger: GTGCATGTGACAGATAATTCACAGAACTCCACAGCC...GCTGGCATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173835.2 |
||
| CDS-3UTR GCA 90 bp | GTCTGGTCTCTGTGGAATCTTGATGGAACCTCCAGAAATGTTGGGAGGAATCCAAAGTGGAATCGGCTCTaGATCTCCTTCTGCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VWSLWNLDGTSRNVGRNPKWNRL*ISFCTS Trigger: ACTAGTGCAGAAGGAGATGCAGAGCCGATTCCACTT...TGGATTCCTCCCAACATTTCTGGAGGTTCCATCAAGATTCCACAGAGACCAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| CDS-3UTR GCA 90 bp | GTCTGGTCTCTGTGGAATCTTGATGGAACCTCCAGAAATGTTGGGAGGAATCCAGTGAGGTCTGTCACATaGACAGAGATCCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VWSLWNLDGTSRNVGRNPVRSVT*TEILSS Trigger: TGAGGAAAGGATCTCTGTGCATGTGACAGACCTCAC...TGGATTCCTCCCAACATTTCTGGAGGTTCCATCAAGATTCCACAGAGACCAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171077.8 |
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| CDS-3UTR CCA 90 bp | ATGCAAGGGAGAGTCAGTGAGTATGGGAAGATGAGGTTCGGGGATGATCAAGATACTCTTCCAGAGACATaGGCTGTGGAGTTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MQGRVSEYGKMRFGDDQDTLPET*AVEFCE Trigger: TTCACAGAACTCCACAGCCCATGTCTCTGGAAGAGT...ATCTTGATCATCCCCGAACCTCATCTTCCCATACTCACTGACTCTCCCTTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| CDS-3UTR CCA 90 bp | CATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGTGTAATGCCAGCCATCTTACTCTTCCAGAGACATaGGCTGTGGAGTTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HDFLDLRVVDPWCNASHLTLPET*AVEFCE Trigger: TTCACAGAACTCCACAGCCCATGTCTCTGGAAGAGT...AAGATGGCTGGCATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000173835.2 |
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| CDS-3UTR CCA 90 bp | AACCAAGGGGCCCAGCTTCAGTGCAGGAATAGAATGATAAACACTGCATTTCTAGGGTCTTGGTTTCCCTaGACCAACTCTTCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NQGAQLQCRNRMINTAFLGSWFP*TNSSRD Trigger: GTCTCTGGAAGAGTTGGTCCAGGGAAACCAAGACCC...TAGAAATGCAGTGTTTATCATTCTATTCCTGCACTGAAGCTGGGCCCCTTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060416.15 |
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| CDS-3UTR CCA 90 bp | ATCCATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGTGTAATGCCAGCCATATCCATGTGTGTTGCTaGTCTCTCCACTCTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: IHDFLDLRVVDPWCNASHIHVCC*SLHSLR Trigger: ACGAAGAGAGTGGAGAGACCAGCAACACACATGGAT...ATGGCTGGCATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
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| CDS-3UTR CCA 90 bp | GATTGGGTGAATAAAGGGGTCAGTATAGGTCATGGGGTGAGGGTGAAGAGAGTTATCCATGTGTGTTGCTaGTCTCTCCACTCTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DWVNKGVSIGHGVRVKRVIHVCC*SLHSLR Trigger: ACGAAGAGAGTGGAGAGACCAGCAACACACATGGAT...AACTCTCTTCACCCTCACCCCATGACCTATACTGACCCCTTTATTCACCCAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| CDS-3UTR TCA 90 bp | GCATCAGTGAGCAGAGATCAAGATGATTATGGGTTAGTGGTTTATAGTCACACTTGTTGGGGCTGTGAGTaGGGTCTGTCACATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ASVSRDQDDYGLVVYSHTCWGCE*GLSHAQ Trigger: CTGTGCATGTGACAGACCTCACTCACAGCCCCAACA...AGTGTGACTATAAACCACTAACCCATAATCATCTTGATCTCTGCTCACTGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
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| CDS-3UTR TCA 90 bp | GCAAGACTAAAATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCCTGATGTTGGGGCTGTaGGTGAGGTCTGTCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: ARLKFHFNRSGDSPVGTILMLGL*VRSVTC Trigger: GCATGTGACAGACCTCACTCACAGCCCCAACATCAG...GATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATTTTAGTCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
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| CDS-3UTR TCA 90 bp | AGGGTCTGGTCTCTGTGGAATCTTGATGGAACCTCCAGAAATGTTGGGAGGAATGGCTGTGGAGTTCTGTaGATTATAGGTGACATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVWSLWNLDGTSRNVGRNGCGVL*IIGDIE Trigger: CTCAATGTCACCTATAATTCACAGAACTCCACAGCC...ATTCCTCCCAACATTTCTGGAGGTTCCATCAAGATTCCACAGAGACCAGACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171077.8 |
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| CDS-3UTR TCA 90 bp | GTTCGTCAGAAGCAGGACTACAGAAGCCAAAAGACCAGGTTAGTATCTTTAAAGATGACAGCGTGTGCCTaGTCCATGTGTGTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRQKQDYRSQKTRLVSLKMTACA*SMCVAG Trigger: ACCAGCAACACACATGGATCAGGCACACGCTGTCAT...CTTTAAAGATACTAACCTGGTCTTTTGGCTTCTGTAGTCCTGCTTCTGACGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| CDS-3UTR CCA 90 bp | GCATCAGTGAGCAGAGATCAAGATGATTATGGGTTAGTGGTTTATAGTCACACTTTGGTTCCATGGTCTTaGAGCCTGGGAGTGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASVSRDQDDYGLVVYSHTLVPWS*SLGVRV Trigger: GACCCTCACTCCCAGGCTCCAAGACCATGGAACCAA...AGTGTGACTATAAACCACTAACCCATAATCATCTTGATCTCTGCTCACTGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
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| CDS-3UTR CCA 90 bp | AACCAAGGGGCCCAGCTTCAGTGCAGGAATAGAATGATAAACACTGCATTTCTAATCTGCCAGGGGTCTTaGTTTCCAGGTGACATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NQGAQLQCRNRMINTAFLICQGS*FPGDIE Trigger: CTCAATGTCACCTGGAAACCAAGACCCCTGGCAGAT...TAGAAATGCAGTGTTTATCATTCTATTCCTGCACTGAAGCTGGGCCCCTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094360.13 |
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| CDS-3UTR CCA 90 bp | GGCACCATCATCCATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGTGTAATCAGAGACATGGGCTGTaGAGTTCTGTGAATTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTIIHDFLDLRVVDPWCNQRHGL*SSVNYL Trigger: CAGATAATTCACAGAACTCCACAGCCCATGTCTCTG...ATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGATGATGGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173835.2 |
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| CDS-3UTR TCA 90 bp | AGAGCAAGACTAAAATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCCCTTTTGTGCATCTCTaGTGTCCAAGGAGCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RARLKFHFNRSGDSPVGTPFVHL*CPRSSP Trigger: GGGACTGCTCCTTGGACATCAGAGATGCACAAAAGG...GGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATTTTAGTCTTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
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| CDS-3UTR TCA 90 bp | AGTTCGTCAGAAGCAGGACTACAGAAGCCAAAAGACCAGGTTAGTATCTTTAAACCTTTTGTGCATCTCTaGTGTCCAAGGAGCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSEAGLQKPKDQVSIFKPFVHL*CPRSSP Trigger: GGGACTGCTCCTTGGACATCAGAGATGCACAAAAGG...TTTAAAGATACTAACCTGGTCTTTTGGCTTCTGTAGTCCTGCTTCTGACGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR TCA 90 bp | AATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATGACTCCTTTTGTGCATCTCTaGTGTCCAAGGAGCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NFILIGLETVQLAPSSMTPFVHL*CPRSSP Trigger: GGGACTGCTCCTTGGACATCAGAGATGCACAAAAGG...AGTCATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCTTCCTGATGTTGGGGCTGTaGGTGAGGTCTGTCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: SKPYIVSFISGELSQSLFLMLGL*VRSVTC Trigger: GCATGTGACAGACCTCACTCACAGCCCCAACATCAG...GAAGAGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
||
| CDS-3UTR TCA 90 bp | TTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATGACTTTATGACAGCGTGTGCCTaGTCCATGTGTGTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FHFNRSGDSPVGTIIHDFMTACA*SMCVAG Trigger: ACCAGCAACACACATGGATCAGGCACACGCTGTCAT...AAAGTCATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
||
| CDS-3UTR GCA 90 bp | TTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATGACTTTTACCTGTACCACATCTaGCAGGGGTCTTGGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FHFNRSGDSPVGTIIHDFYLYHI*QGSWFP Trigger: GGGAAACCAAGACCCCTGGCAGATGTGGTACAGGTA...AAAGTCATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000173835.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCGTCAGAAGCAGGACTACAGAAGCCAAAAGACCAGGTTAGTATCTTTAAATACCTGTACCACATCTaGCAGGGGTCTTGGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSEAGLQKPKDQVSIFKYLYHI*QGSWFP Trigger: GGGAAACCAAGACCCCTGGCAGATGTGGTACAGGTA...TTTAAAGATACTAACCTGGTCTTTTGGCTTCTGTAGTCCTGCTTCTGACGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR CCA 90 bp | AGACTAAAATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCTTGGTTCCATGGTCTTaGAGCCTGGGAGTGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLKFHFNRSGDSPVGTIILVPWS*SLGVRV Trigger: GACCCTCACTCCCAGGCTCCAAGACCATGGAACCAA...GATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATTTTAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
||
| CDS-3UTR CCA 90 bp | AATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATGACTGGGTCTTGGTTTCCCTaGACCAACTCTTCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NFILIGLETVQLAPSSMTGSWFP*TNSSRD Trigger: GTCTCTGGAAGAGTTGGTCCAGGGAAACCAAGACCC...AGTCATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000173835.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGTAGCATAGAGTCTGATTTTCCCAGGCTTTCCAAAGGCCAGAACCTTTTATCCACTCTCTTCGTATaGGATCTCTTGCTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCSIESDFPRLSKGQNLLSTLFV*DLLLRK Trigger: CTTCCTCAGCAAGAGATCCCATACGAAGAGAGTGGA...TAAAAGGTTCTGGCCTTTGGAAAGCCTGGGAAAATCAGACTCTATGCTACAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
||
| 3UTR CAA 72 bp | AGTCTCATAACACCAATTTTTGCAGTGGAAACTCTCTaGTTTCTGGTAACCAAGGGGCCCAGCTTCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLITPIFAVETL*FLVTKGPSFSA Trigger: TGCACTGAAGCTGGGCCCCTTGGTTACCAGAAACAAGAGAGTTTCCACTGCAAAAATTGGTGTTATGAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCTTCCCTTTTGTGCATCTCTaGTGTCCAAGGAGCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKPYIVSFISGELSQSLFPFVHL*CPRSSP Trigger: GGGACTGCTCCTTGGACATCAGAGATGCACAAAAGG...GAAGAGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGCTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
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| CDS-3UTR TCA 90 bp | GCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCTTCAACTTATGACAGCGTGTGCCTaGTCCATGTGTGTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AIHSFLYLRRTKSKPLQLMTACA*SMCVAG Trigger: ACCAGCAACACACATGGATCAGGCACACGCTGTCAT...AAGTTGAAGAGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
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| CDS-3UTR GCA 90 bp | ATCCATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGTGTAATGCCAGCCATGAATTATCTGTCACATaGACAGAGATCCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IHDFLDLRVVDPWCNASHELSVT*TEILSS Trigger: TGAGGAAAGGATCTCTGTGCATGTGACAGATAATTC...ATGGCTGGCATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173835.2 |
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| CDS-3UTR CCA 90 bp | TTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATGACTTTCATCCATGTGTGTTGCTaGTCTCTCCACTCTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FILIGLETVQLAPSSMTFIHVCC*SLHSLR Trigger: ACGAAGAGAGTGGAGAGACCAGCAACACACATGGAT...GAAAGTCATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
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| CDS-3UTR GCA 90 bp | TTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATGACTTTAAGTGGAATCGGCTCTaGATCTCCTTCTGCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FHFNRSGDSPVGTIIHDFKWNRL*ISFCTS Trigger: ACTAGTGCAGAAGGAGATGCAGAGCCGATTCCACTT...AAAGTCATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
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| CDS-3UTR GCA 90 bp | CTAAAATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATTACCTGTACCACATCTaGCAGGGGTCTTGGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKFHFNRSGDSPVGTIIHYLYHI*QGSWFP Trigger: TGGAAACCAAGACCCCTGGCAGATGTGGTACAGGTA...ATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094360.13 |
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| CDS-3UTR CCA 90 bp | AATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATGACTACTCTTCCAGAGACATaGGCTGTGGAGTTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NFILIGLETVQLAPSSMTTLPET*AVEFCE Trigger: TTCACAGAACTCCACAGCCCATGTCTCTGGAAGAGT...AGTCATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000173835.2 |
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| CDS-3UTR CCA 90 bp | AATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATGACTATCCATGTGTGTTGCTaGTCTCTCCACTCTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NFILIGLETVQLAPSSMTIHVCC*SLHSLR Trigger: ACGAAGAGAGTGGAGAGACCAGCAACACACATGGAT...AGTCATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
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| CDS-3UTR GCA 90 bp | GCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCTTCAACTTAAGTGGAATCGGCTCTaGATCTCCTTCTGCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AIHSFLYLRRTKSKPLQLKWNRL*ISFCTS Trigger: ACTAGTGCAGAAGGAGATGCAGAGCCGATTCCACTT...AAGTTGAAGAGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
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| CDS-3UTR GCA 90 bp | AGACTAAAATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCAAGTGGAATCGGCTCTaGATCTCCTTCTGCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLKFHFNRSGDSPVGTIIKWNRL*ISFCTS Trigger: ACTAGTGCAGAAGGAGATGCAGAGCCGATTCCACTT...GATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATTTTAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
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| CDS-3UTR GCA 90 bp | CTTTGCTTTTTAAATGCAACCAAACACTTAAAGTGGGCATCAGTGAGCAGAGATGTGAGGTCTGTCACATaGACAGAGATCCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCFLNATKHLKWASVSRDVRSVT*TEILSS Trigger: TGAGGAAAGGATCTCTGTGCATGTGACAGACCTCAC...ATCTCTGCTCACTGATGCCCACTTTAAGTGTTTGGTTGCATTTAAAAAGCAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
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| CDS-3UTR TCA 90 bp | CCCATATCTTTGCTTTTTAAATGCAACCAAACACTTAAAGTGGGCATCAGTGAGGGCTGTGGAGTTCTGTaGATTATAGGTGACATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PISLLFKCNQTLKVGISEGCGVL*IIGDIE Trigger: CTCAATGTCACCTATAATTCACAGAACTCCACAGCC...CTCACTGATGCCCACTTTAAGTGTTTGGTTGCATTTAAAAAGCAAAGATATGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060416.15 |
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| CDS-3UTR GCA 90 bp | GTTCGTCAGAAGCAGGACTACAGAAGCCAAAAGACCAGGTTAGTATCTTTAAAGGAATTATCTGTCACATaGACAGAGATCCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VRQKQDYRSQKTRLVSLKELSVT*TEILSS Trigger: TGAGGAAAGGATCTCTGTGCATGTGACAGATAATTC...CTTTAAAGATACTAACCTGGTCTTTTGGCTTCTGTAGTCCTGCTTCTGACGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121492.8 |
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| CDS-3UTR CCA 90 bp | GCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCTTCAACTTCAGAGACATGGGCTGTaGAGTTCTGTGAATTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIHSFLYLRRTKSKPLQLQRHGL*SSVNYR Trigger: CCTATAATTCACAGAACTCCACAGCCCATGTCTCTG...AAGTTGAAGAGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060416.15 |
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| CDS-3UTR CCA 90 bp | CAGAAGCTTTTAATACCTACAAGGCCTGATCAATCTGTCTACTTAGTTTGGAAATCCACTCTCTTCGTATaGGATCTCTTGCTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QKLLIPTRPDQSVYLVWKSTLFV*DLLLRK Trigger: CTTCCTCAGCAAGAGATCCCATACGAAGAGAGTGGA...TTTCCAAACTAAGTAGACAGATTGATCAGGCCTTGTAGGTATTAAAAGCTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
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| CDS-3UTR GCA 90 bp | TCCTGTAGCATAGAGTCTGATTTTCCCAGGCTTTCCAAAGGCCAGAACCTTTTAAGAAATTCCATGTTTTaGCTCCTTTTTCCAGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SCSIESDFPRLSKGQNLLRNSMF*LLFPVY Trigger: ATAGACTGGAAAAAGGAGGCAAAACATGGAATTTCT...TAAAAGGTTCTGGCCTTTGGAAAGCCTGGGAAAATCAGACTCTATGCTACAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
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| 3UTR CAA 72 bp | CTGAAGGACAGGCATCAGAATAAGGAAGTGTGTAGCTaGAAGGTTTTGGATATTAGACACATTTTAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKDRHQNKEVCS*KVLDIRHILVS Trigger: AGAGACTAAAATGTGTCTAATATCCAAAACCTTCAAGCTACACACTTCCTTATTCTGATGCCTGTCCTTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| 3UTR CAA 72 bp | AGGCATCAGAATAAGGAAGTGTGTAGCTTGAAGGTTTaGGATATTAGACACATTTTAGTCTCTTGTAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RHQNKEVCSLKV*DIRHILVSCKF Trigger: GAATTTACAAGAGACTAAAATGTGTCTAATATCCAAAACCTTCAAGCTACACACTTCCTTATTCTGATGCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000154933.2 |
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| CDS-3UTR CAA 90 bp | ATGCTAAGCCAGGCCATACTGGGTCCACCACAGGGAAGAGCCCTGAAGCACATCCCTGATCCATGTGTGTaGCTGGTCTCTCCACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MLSQAILGPPQGRALKHIPDPCV*LVSPLS Trigger: AGAGAGTGGAGAGACCAGCAACACACATGGATCAGG...GATGTGCTTCAGGGCTCTTCCCTGTGGTGGACCCAGTATGGCCTGGCTTAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| CDS-3UTR CAA 90 bp | CATACTGGGTCCACCACAGGGAAGAGCCCTGAAGCACATCAAATGCTGGGATCCCCAAGAAGCAGGAATTaGATAGCCGCTTCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: HTGSTTGKSPEAHQMLGSPRSRN*IAASPM Trigger: CATGGGAGAAGCGGCTATCAAATTCCTGCTTCTTGG...GGATCCCAGCATTTGATGTGCTTCAGGGCTCTTCCCTGTGGTGGACCCAGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| CDS CCA 90 bp | AGCCGCTTCTCCCATGGCTACCTGTACCACATCTGCCAGGGGTCTTaGTTTCCAGGTGACATTGAGCTGGATAGTCTTTTGAACAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SRFSHGYLYHICQGS*FPGDIELDSLLNSH Trigger: GTGACTGTTCAAAAGACTATCCAGCTCAATGTCACCTGGAAACCAAGACCCCTGGCAGATGTGGTACAGGTAGCCATGGGAGAAGCGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094360.13 |
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| CDS CCA 90 bp | GGGGTCTTGGTTTCCCTGGACCAACTCTTCCAGAGACATGGGCTGTaGAGTTCTGTGAATTATCTGTCACATGCACAGAGATCCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GVLVSLDQLFQRHGL*SSVNYLSHAQRSFP Trigger: AGGAAAGGATCTCTGTGCATGTGACAGATAATTCACAGAACTCCACAGCCCATGTCTCTGGAAGAGTTGGTCCAGGGAAACCAAGACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000173835.2 |
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| CDS CCA 90 bp | GAGAGACTAATCCATGACAGCGTGTGCCTGATCCATGTGTGTTGCTaGTCTCTCCACTCTCTTCGTATGGGATCTCTGAGGAAGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ERLIHDSVCLIHVCC*SLHSLRMGSLRKKK Trigger: CTTCTTCTTCCTCAGAGATCCCATACGAAGAGAGTGGAGAGACCAGCAACACACATGGATCAGGCACACGCTGTCATGGATTAGTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165045.9 |
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| CDS-3UTR CAA 90 bp | GATTGGGTGAATAAAGGGGTCAGTATAGGTCATGGGGTGAGGGTGAAGAGAGTTACAGAGCACATCACATaGGTAGGACGACCAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DWVNKGVSIGHGVRVKRVTEHIT*VGRPSS Trigger: GGAGCTTGGTCGTCCTACCAATGTGATGTGCTCTGT...AACTCTCTTCACCCTCACCCCATGACCTATACTGACCCCTTTATTCACCCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171077.8 |
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| CDS-3UTR CAA 90 bp | ACCATCATCCATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGTGTAATGCCCCTGATCCATGTGTGTaGCTGGTCTCTCCACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TIIHDFLDLRVVDPWCNAPDPCV*LVSPLS Trigger: AGAGAGTGGAGAGACCAGCAACACACATGGATCAGG...GGCATTACACCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGATGATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
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| CDS-3UTR CAA 90 bp | ATGCAAGGGAGAGTCAGTGAGTATGGGAAGATGAGGTTCGGGGATGATCAAGATCCAAGAAGCAGGAATTaGATAGCCGCTTCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: MQGRVSEYGKMRFGDDQDPRSRN*IAASPM Trigger: CATGGGAGAAGCGGCTATCAAATTCCTGCTTCTTGG...ATCTTGATCATCCCCGAACCTCATCTTCCCATACTCACTGACTCTCCCTTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| CDS-3UTR CAA 90 bp | GATTCTGTTCCTTCCTGTAGCATAGAGTCTGATTTTCCCAGGCTTTCCAAAGGCCCTGATCCATGTGTGTaGCTGGTCTCTCCACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DSVPSCSIESDFPRLSKGPDPCV*LVSPLS Trigger: AGAGAGTGGAGAGACCAGCAACACACATGGATCAGG...GCCTTTGGAAAGCCTGGGAAAATCAGACTCTATGCTACAGGAAGGAACAGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
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| CDS-3UTR CAA 90 bp | CCAGTTGGCACCATCATCCATGACTTTCTTGACTTGAGAGTGGTGGATCCCTGGCAGAAATTCCATGTTTaGCCTCCTTTTTCCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVGTIIHDFLDLRVVDPWQKFHV*PPFSSL Trigger: CAGACTGGAAAAAGGAGGCAAAACATGGAATTTCTG...CCAGGGATCCACCACTCTCAAGTCAAGAAAGTCATGGATGATGGTGCCAACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
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| CDS-3UTR CAA 90 bp | ATGCAAGGGAGAGTCAGTGAGTATGGGAAGATGAGGTTCGGGGATGATCAAGATCAGAAATTCCATGTTTaGCCTCCTTTTTCCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MQGRVSEYGKMRFGDDQDQKFHV*PPFSSL Trigger: CAGACTGGAAAAAGGAGGCAAAACATGGAATTTCTG...ATCTTGATCATCCCCGAACCTCATCTTCCCATACTCACTGACTCTCCCTTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| CDS-3UTR CAA 90 bp | GCATCAGTGAGCAGAGATCAAGATGATTATGGGTTAGTGGTTTATAGTCACACTACAGAGCACATCACATaGGTAGGACGACCAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASVSRDQDDYGLVVYSHTTEHIT*VGRPSS Trigger: GGAGCTTGGTCGTCCTACCAATGTGATGTGCTCTGT...AGTGTGACTATAAACCACTAACCCATAATCATCTTGATCTCTGCTCACTGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
||
| CDS-3UTR CAA 90 bp | TTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATGACTTTCCTGATCCATGTGTGTaGCTGGTCTCTCCACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FHFNRSGDSPVGTIIHDFPDPCV*LVSPLS Trigger: AGAGAGTGGAGAGACCAGCAACACACATGGATCAGG...AAAGTCATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
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| CDS-3UTR CAA 90 bp | CTTTGCTTTTTAAATGCAACCAAACACTTAAAGTGGGCATCAGTGAGCAGAGATACAGAGCACATCACATaGGTAGGACGACCAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCFLNATKHLKWASVSRDTEHIT*VGRPSS Trigger: GGAGCTTGGTCGTCCTACCAATGTGATGTGCTCTGT...ATCTCTGCTCACTGATGCCCACTTTAAGTGTTTGGTTGCATTTAAAAAGCAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGACTAAAATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCCCAAGAAGCAGGAATTaGATAGCCGCTTCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RARLKFHFNRSGDSPVGTPRSRN*IAASPM Trigger: CATGGGAGAAGCGGCTATCAAATTCCTGCTTCTTGG...GGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATTTTAGTCTTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
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| CDS-3UTR CAA 90 bp | AATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCATGACTCCAAGAAGCAGGAATTaGATAGCCGCTTCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: NFILIGLETVQLAPSSMTPRSRN*IAASPM Trigger: CATGGGAGAAGCGGCTATCAAATTCCTGCTTCTTGG...AGTCATGGATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGCCAAAAGACCAGGTTAGTATCTTTAAAGATTTTCCCAGAACTATGGACCCTGATCCATGTGTGTaGCTGGTCTCTCCACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QKPKDQVSIFKDFPRTMDPDPCV*LVSPLS Trigger: AGAGAGTGGAGAGACCAGCAACACACATGGATCAGG...GTCCATAGTTCTGGGAAAATCTTTAAAGATACTAACCTGGTCTTTTGGCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAGAAGAAGCAGATCCCAAGAAGCAGGAATTTGATAGCCGCTTCTCCCATCAGAAATTCCATGTTTaGCCTCCTTTTTCCAGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: EEEEADPKKQEFDSRFSHQKFHV*PPFSSL Trigger: TAGACTGGAAAAAGGAGGCAAAACATGGAATTTCTG...ATGGGAGAAGCGGCTATCAAATTCCTGCTTCTTGGGATCTGCTTCTTCTTCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154933.2 |
||
| CDS-3UTR CAA 90 bp | AGACTAAAATTTCATTTTAATAGGTCTGGAGACAGTCCAGTTGGCACCATCATCCCAAGAAGCAGGAATTaGATAGCCGCTTCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RLKFHFNRSGDSPVGTIIPRSRN*IAASPM Trigger: CATGGGAGAAGCGGCTATCAAATTCCTGCTTCTTGG...GATGATGGTGCCAACTGGACTGTCTCCAGACCTATTAAAATGAAATTTTAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 ENSMUST00000173835.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTGAGCAGAGATCAAGATGATTATGGGTTAGTGGTTTATAGTCACACTGGTCAGAAATTCCATGTTTaGCCTCCTTTTTCCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRDQDDYGLVVYSHTGQKFHV*PPFSSL Trigger: CAGACTGGAAAAAGGAGGCAAAACATGGAATTTCTG...ACCAGTGTGACTATAAACCACTAACCCATAATCATCTTGATCTCTGCTCACTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
||
| CDS-3UTR CAA 90 bp | AGTTCGTCAGAAGCAGGACTACAGAAGCCAAAAGACCAGGTTAGTATCTTTAAACAGAAATTCCATGTTTaGCCTCCTTTTTCCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSEAGLQKPKDQVSIFKQKFHV*PPFSSL Trigger: CAGACTGGAAAAAGGAGGCAAAACATGGAATTTCTG...TTTAAAGATACTAACCTGGTCTTTTGGCTTCTGTAGTCCTGCTTCTGACGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000171077.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTCAAAGCCATACATAGTTTCCTTTATCTCAGGAGAACTAAGTCAAAGCCTCAGAAATTCCATGTTTaGCCTCCTTTTTCCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFKAIHSFLYLRRTKSKPQKFHV*PPFSSL Trigger: CAGACTGGAAAAAGGAGGCAAAACATGGAATTTCTG...AGGCTTTGACTTAGTTCTCCTGAGATAAAGGAAACTATGTATGGCTTTGAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060416.15 ENSMUST00000094360.13 |
||
| CDS CCA 72 bp | TCCCATGGCTACCTGTACCACATCTGCCAGGGGTCTTaGTTTCCAGGTGACATTGAGCTGGATAGTCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SHGYLYHICQGS*FPGDIELDSLL Trigger: CAAAAGACTATCCAGCTCAATGTCACCTGGAAACCAAGACCCCTGGCAGATGTGGTACAGGTAGCCATGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094360.13 |
||
| CDS TCA 72 bp | TTCCCCTTCATGGAACCAGTACCCAAAGGCAGCATCTaGCCACCTATGACCTCTCTAGGGAGAATAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FPFMEPVPKGSI*PPMTSLGRIKQ Trigger: CTGCTTTATTCTCCCTAGAGAGGTCATAGGTGGTCAGATGCTGCCTTTGGGTACTGGTTCCATGAAGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172988.8 |
||
| CDS TCA 72 bp | GTTGCTGGTCTCTCCACTCTCTTCGTATGGGATCTCTaGGGAAGAAGAAGCAGATCCCAAGAAGCAGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: VAGLSTLFVWDL*GRRSRSQEAGI Trigger: AATTCCTGCTTCTTGGGATCTGCTTCTTCTTCCTCAGAGATCCCATACGAAGAGAGTGGAGAGACCAGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165045.9 |
||
| CDS TCA 72 bp | ACCAACTCTTCCAGAGACATGGGCTGTGGAGTTCTGTaGATTATCTGTCACATGCACAGAGATCCTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TNSSRDMGCGVL*IICHMHRDPFL Trigger: GAGGAAAGGATCTCTGTGCATGTGACAGATAATTCACAGAACTCCACAGCCCATGTCTCTGGAAGAGTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121492.8 ENSMUST00000173835.2 |
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