Pregenerated sensors for SIGLECG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030468Ensembl transcript IDs: ENSMUST00000005592.7
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGTCAGTTTGTaGGAGGTCCCTTCCACGATGCGGGTCCTCGGGATCAATCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: RHEPQCTCGESKVSL*EVPSTMRVLGINLR Trigger: TCTTAGATTGATCCCGAGGACCCGCATCGTGGAAGGGACCTCCCACAAACTGACCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| 3UTR-3UTR GCA 90 bp | GGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCCCCTTTTAAGGAGAGCATCTaGTTTCTTTTGGAGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: GINLRVHQAWWHTYLTPPFKESI*FLLEAP Trigger: GGGAGCCTCCAAAAGAAAGCAGATGCTCTCCTTAAA...AGGGGGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| 3UTR GCA 72 bp | CTTACATGTATGTGCATGCATAGGCATGAGCCACAGTaGACATGTGGGGAGTCAAAGGTCAGTTTGTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LTCMCMHRHEPQ*TCGESKVSLWE Trigger: CTCCCACAAACTGACCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACATGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| 3UTR CCA 72 bp | GTCCTCGGGATCAATCTAAGAGTTCATCAAGCTTGGTaGCACACATATTTAACACCCCCTACCCCCAGGATT | + |
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Preference number: 3 (lower is better) Translates to: VLGINLRVHQAW*HTYLTPPTPRI Trigger: AATCCTGGGGGTAGGGGGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCGAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| 3UTR-3UTR CAA 90 bp | GGTCCTCGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACAGCATCTGCTTTCTTTaGGAGGCTCCCTTAACTACT | + |
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Preference number: 3 (lower is better) Translates to: GPRDQSKSSSSLVAHIFNSICFL*EAPLTT Trigger: AGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCT...GTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCGAGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | GTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGTCACTGGGCCCCAGCTCCTaGAGGAGGCTCAGGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VCACIGMSHSAHVGSQRSLGPSS*RRLREL Trigger: CAGCTCCCTGAGCCTCCTTCAGGAGCTGGGGCCCAG...TGACCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | CATGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGGCGCTGGGCACCCAGTaGGTTCTGTGCAGCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: HVCACIGMSHSAHVGSQRALGTQ*VLCSTG Trigger: ACCTGTGCTGCACAGAACCCACTGGGTGCCCAGCGC...CCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | GTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGTCAGGGCAGGCCAGGCTCTaGAGGAGCAGTTGCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCACIGMSHSAHVGSQRSGQARL*RSSCSA Trigger: TGCACTGCAACTGCTCCTCCAGAGCCTGGCCTGCCC...TGACCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR GCA 90 bp | GTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGTCAAGAGGCTCAGAGAGATaGGCTGGGCACCCAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: VCACIGMSHSAHVGSQRSRGSER*AGHPVG Trigger: ACCCACTGGGTGCCCAGCGCATCTCTCTGAGCCTCT...TGACCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | ACATGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGCAGCAGGACAGAGGTaGTCTGGGCTCCATGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TCMCMHRHEPQCTCGESKAAGQR*SGLHGC Trigger: ACACCCATGGAGCCCAGACCACCTCTGTCCTGCTGC...CTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR GCA 90 bp | CCTCGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCAGTCCAGGATCGTGCTaGCCCGGGAGAGCTTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PRDQSKSSSSLVAHIFNTSPGSC*PGRAWA Trigger: GGCCCAAGCTCTCCCGGGGCAGCACGATCCTGGACT...GGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | TGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGTCCCTTCATGTTCTCTCTaGACCAGAGGCAGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: CMCMHRHEPQCTCGESKVPSCSL*TRGSSR Trigger: CCTGGAGCTGCCTCTGGTCCAGAGAGAACATGAAGG...GACCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | CATGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGTCTTGGGGACCACATTaGTGTAGTCCAGGATCGTGC | + |
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Preference number: 4 (lower is better) Translates to: HVCACIGMSHSAHVGSQRSWGPH*CSPGSC Trigger: GCACGATCCTGGACTACATCAATGTGGTCCCCAAGA...CCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR GCA 90 bp | CATGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGACCCAGTGGGTTCTGTaGAGCACAGGTGAATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: HVCACIGMSHSAHVGSQRTQWVL*STGEFS Trigger: GGAGAATTCACCTGTGCTGCACAGAACCCACTGGGT...CCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR GCA 90 bp | CGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCCCCGAGGAGCAGTTGCAGTaGAGACCCTTGGCCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RDQSKSSSSLVAHIFNTPEEQLQ*RPLASQ Trigger: CTGGGAGGCCAAGGGTCTGCACTGCAACTGCTCCTC...GGGGGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | CATGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGCCAGGACCTCAGGAATaGAGATATCTGGCTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: HVCACIGMSHSAHVGSQRPGPQE*RYLASE Trigger: CTCAGAAGCCAGATATCTTCATTCCTGAGGTCCTGG...CCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR GCA 90 bp | TGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGTCTGGATGTGTGCGGTCTaGTTTCTTGGAAGGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: CMCMHRHEPQCTCGESKVWMCAV*FLGRRQ Trigger: CTGTCTCCTTCCAAGAAAGCAGACCGCACACATCCA...GACCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR GCA 90 bp | CATGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGGCCAAAGCCCAAAACTaGTCCCTTGGAGAATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HVCACIGMSHSAHVGSQRAKAQN*SLGECC Trigger: ACAGCATTCTCCAAGGGAGCAGTTTTGGGCTTTGGC...CCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR GCA 90 bp | CCTCGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCGGATCCTGGGTCTCCTaGAGTCTCAGGCGGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PRDQSKSSSSLVAHIFNTGSWVS*SLRREK Trigger: CTTCTCCCGCCTGAGACTGCAGGAGACCCAGGATCC...GGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | AGCATCTGCTTTCTTTTGGAGGCTCCCTTAACTACTTTACCATTTAGGTCTCAGGCAGACAACGGTCACTaGCTCCCCAGGCTCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: SICFLLEAPLTTLPFRSQADNGH*LPRLQD Trigger: GTCCTGGAGCCTGGGGAGCCAGTGACCGTTGTCTGC...CTGAGACCTAAATGGTAAAGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | CACATGTGGGGAGTCAAAGGTCAGTTTGTGGGAGGTCCCTTCCACGATGCGGGTAGGGTACGTGAAATGTaGGTCCTTTTGCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HMWGVKGQFVGGPFHDAGRVREM*VLLLLL Trigger: AAGAAGAAGCAAAAGGACCCACATTTCACGTACCCT...ACCCGCATCGTGGAAGGGACCTCCCACAAACTGACCTTTGACTCCCCACATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | CATGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGTCTGTGCAGCACAGGTaGATTCTCCTTCATGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: HVCACIGMSHSAHVGSQRSVQHR*ILLHVL Trigger: GAGAACATGAAGGAGAATTCACCTGTGCTGCACAGA...CCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | ATTTTTAAGGAGAGCATCTGCTTTCTTTTGGAGGCTCCCTTAACTACTTTACCATCCAGGACTCACAGCTaGGCCAGAGGCTGGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: IFKESICFLLEAPLTTLPSRTHS*ARGWAP Trigger: TGGGGCCCAGCCTCTGGCTCAGCTGTGAGTCCTGGA...TGGTAAAGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCTCTCCTTAAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | CACATGTGGGGAGTCAAAGGTCAGTTTGTGGGAGGTCCCTTCCACGATGCGGGTCTTTTGCTTCTTCTTTaGTTTAGGGAAGTGAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: HMWGVKGQFVGGPFHDAGLLLLL*FREVSV Trigger: GACACTCACTTCCCTAAACCAAAGAAGAAGCAAAAG...ACCCGCATCGTGGAAGGGACCTCCCACAAACTGACCTTTGACTCCCCACATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | CATGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGGTTGAGTCTCCCCACTaGACATCTTTGATTAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: HVCACIGMSHSAHVGSQRVESPH*TSLISK Trigger: CTTGCTAATCAAAGATGTTCAGTGGGGAGACTCAAC...CCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | CGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCCCCGGGAGATGGCATTCCTaGGGATTTCCAACACTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RDQSKSSSSLVAHIFNTPGRWHS*GFPTLS Trigger: GGACAGTGTTGGAAATCCTCAGGAATGCCATCTCCC...GGGGGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | AGCATCTGCTTTCTTTTGGAGGCTCCCTTAACTACTTTACCATTTAGGTCTCAGCAGGACCCCAGGCTCTaGAGACTGGATTGGGATCAG | + |
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Preference number: 4 (lower is better) Translates to: SICFLLEAPLTTLPFRSQQDPRL*RLDWDQ Trigger: CTGATCCCAATCCAGTCTTCAGAGCCTGGGGTCCTG...CTGAGACCTAAATGGTAAAGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | CGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCCCCGACCAAGAAAGGACTTaGTCCTCTAGGACCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RDQSKSSSSLVAHIFNTPDQERT*SSRTQL Trigger: GAGCTGGGTCCTAGAGGACCAAGTCCTTTCTTGGTC...GGGGGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | AGCATCTGCTTTCTTTTGGAGGCTCCCTTAACTACTTTACCATTTAGGTCTCAGCACTCTCAGGTCCTGTaGGGGGTACAGCACAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: SICFLLEAPLTTLPFRSQHSQVL*GVQHRE Trigger: CTCTCTGTGCTGTACCCCCCACAGGACCTGAGAGTG...CTGAGACCTAAATGGTAAAGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | GGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCCCCTGAGCTGGGCATTGGTTaGAGGTCCAGGAAAACAAGC | + |
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Preference number: 4 (lower is better) Translates to: GINLRVHQAWWHTYLTPPELGIG*RSRKTS Trigger: GCTTGTTTTCCTGGACCTTCAACCAATGCCCAGCTC...AGGGGGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | GGTCCTCGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACGACCCAGGGTCCAAGTaGGCTGAAAGTGACTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: GPRDQSKSSSSLVAHIFNDPGSK*AESDCE Trigger: TTCACAGTCACTTTCAGCTCACTTGGACCCTGGGTC...GTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCGAGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | GGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCCCCTTTTGGTTTAGGGAAGTaGGTGTCCAGGGGTGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GINLRVHQAWWHTYLTPPFGLGK*VSRGEL Trigger: GAGCTCACCCCTGGACACTCACTTCCCTAAACCAAA...AGGGGGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | AGCATCTGCTTTCTTTTGGAGGCTCCCTTAACTACTTTACCATTTAGGTCTCAGTGCGGTCTGCTTTCTTaGAAGGAGACAGCATCCCCC | + |
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Preference number: 4 (lower is better) Translates to: SICFLLEAPLTTLPFRSQCGLLS*KETASP Trigger: GGGGGATGCTGTCTCCTTCCAAGAAAGCAGACCGCA...CTGAGACCTAAATGGTAAAGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | CCTCGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCCCAGGCTCTGAAGACTaGATTGGGATCAGGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PRDQSKSSSSLVAHIFNTPGSED*IGIRVC Trigger: ACAGACCCTGATCCCAATCCAGTCTTCAGAGCCTGG...GGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | GGTCCTCGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACAAGCCCAACTCACATTaGCTGGGGGATTGCTATAGG | + |
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Preference number: 4 (lower is better) Translates to: GPRDQSKSSSSLVAHIFNKPNSH*LGDCYR Trigger: CCTATAGCAATCCCCCAGCCAATGTGAGTTGGGCTT...GTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCGAGGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | GGTCCTCGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACTGGGTTCCTTTCTTCTaGAGGGTCTTCACGATGACC | + |
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Preference number: 4 (lower is better) Translates to: GPRDQSKSSSSLVAHIFNWVPFF*RVFTMT Trigger: GGTCATCGTGAAGACCCTCCAGAAGAAAGGAACCCA...GTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCGAGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | GGTCCTCGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACCCCACTGAACATCTTTaGTTAGCAAGGAACAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: GPRDQSKSSSSLVAHIFNPTEHL*LARNSS Trigger: AGAACTGTTCCTTGCTAATCAAAGATGTTCAGTGGG...GTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCGAGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | GGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCCCCTGAAGAAATAGTTTGTTaGGTCTCCCCACTGAACATC | + |
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Preference number: 4 (lower is better) Translates to: GINLRVHQAWWHTYLTPPEEIVC*VSPLNI Trigger: GATGTTCAGTGGGGAGACTCAACAAACTATTTCTTC...AGGGGGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR GCA 90 bp | CGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCCCCAAATGTGGGTCCTTTTaGTTCTTCTTTGGTTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: RDQSKSSSSLVAHIFNTPKCGSF*FFFGLG Trigger: CCCTAAACCAAAGAAGAAGCAAAAGGACCCACATTT...GGGGGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | AGCATCTGCTTTCTTTTGGAGGCTCCCTTAACTACTTTACCATTTAGGTCTCAGCCAGTAGCCATAAAGTaGGGAACGGTTAAGCCATTT | + |
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Preference number: 4 (lower is better) Translates to: SICFLLEAPLTTLPFRSQPVAIK*GTVKPF Trigger: AAATGGCTTAACCGTTCCCCACTTTATGGCTACTGG...CTGAGACCTAAATGGTAAAGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | AGCATCTGCTTTCTTTTGGAGGCTCCCTTAACTACTTTACCATTTAGGTCTCAGCCTTGGAGAATGCTGTaGCACTGTCTTTATCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: SICFLLEAPLTTLPFRSQPWRML*HCLYQV Trigger: TACCTGATAAAGACAGTGCCACAGCATTCTCCAAGG...CTGAGACCTAAATGGTAAAGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | ATTTTTAAGGAGAGCATCTGCTTTCTTTTGGAGGCTCCCTTAACTACTTTACCACCTAGAAGGGGCATCTaGTTCAGCTTTCCAATTCCG | + |
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Preference number: 4 (lower is better) Translates to: IFKESICFLLEAPLTTLPPRRGI*FSFPIP Trigger: CGGAATTGGAAAGCTGAACCAGATGCCCCTTCTAGG...TGGTAAAGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCTCTCCTTAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR TCA 90 bp | CCTCGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCATGCAAGTCTGGGACTaGTACATTGTCATGGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: PRDQSKSSSSLVAHIFNTMQVWD*YIVMEN Trigger: ATTTTCCATGACAATGTATCAGTCCCAGACTTGCAT...GGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| 3UTR CAA 72 bp | CCCAGGATTATTTTTAAGGAGAGCATCTGCTTTCTTTaGGAGGCTCCCTTAACTACTTTACCATTTAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PRIIFKESICFL*EAPLTTLPFRS Trigger: AGACCTAAATGGTAAAGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCTCTCCTTAAAAATAATCCTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CCA 90 bp | AGCATCTGCTTTCTTTTGGAGGCTCCCTTAACTACTTTACCATTTAGGTCTCAGTATCTTTGTTATTTGTaGCCACTGGAAATGAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: SICFLLEAPLTTLPFRSQYLCYL*PLEMKV Trigger: CACTTTCATTTCCAGTGGCCACAAATAACAAAGATA...CTGAGACCTAAATGGTAAAGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS TCA 90 bp | CAGCTTTCCAATTCCGAGCCAGGGACCTGGTCTTGGGGACCACATTaGTGTAGTCCAGGATCGTGCTGCCCCGGGAGAGCTTGGGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: QLSNSEPGTWSWGPH*CSPGSCCPGRAWAW Trigger: CCAGGCCCAAGCTCTCCCGGGGCAGCACGATCCTGGACTACATCAATGTGGTCCCCAAGACCAGGTCCCTGGCTCGGAATTGGAAAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS CCA 90 bp | CGGGAGAGCTTGGGCCTGGAGGGTTCCTCCTGGGTTCCTTTCTTCTaGAGGGTCTTCACGATGACCACGATGAGGCACAGGGCAAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: RESLGLEGSSWVPFF*RVFTMTTMRHRARR Trigger: CCTCCTTGCCCTGTGCCTCATCGTGGTCATCGTGAAGACCCTCCAGAAGAAAGGAACCCAGGAGGAACCCTCCAGGCCCAAGCTCTCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS CCA 90 bp | AGGATCGTGCTGCCCCGGGAGAGCTTGGGCCTGGAGGGTTCCTCCTaGGTTCCTTTCTTCTGGAGGGTCTTCACGATGACCACGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: RIVLPRESLGLEGSS*VPFFWRVFTMTTMR Trigger: CCTCATCGTGGTCATCGTGAAGACCCTCCAGAAGAAAGGAACCCAGGAGGAACCCTCCAGGCCCAAGCTCTCCCGGGGCAGCACGATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | CACATGTGGGGAGTCAAAGGTCAGTTTGTGGGAGGTCCCTTCCACGATGCGGGTGAGGTCCAGGGTATGTaGCTGGGAGCCCAGCCTATT | + |
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Preference number: 5 (lower is better) Translates to: HMWGVKGQFVGGPFHDAGEVQGM*LGAQPI Trigger: AATAGGCTGGGCTCCCAGCAACATACCCTGGACCTC...ACCCGCATCGTGGAAGGGACCTCCCACAAACTGACCTTTGACTCCCCACATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | CACATGTGGGGAGTCAAAGGTCAGTTTGTGGGAGGTCCCTTCCACGATGCGGGTGGAGCTGGGCATTGGTaGAAGGTCCAGGAAAACAAG | + |
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Preference number: 5 (lower is better) Translates to: HMWGVKGQFVGGPFHDAGGAGHW*KVQENK Trigger: CTTGTTTTCCTGGACCTTCAACCAATGCCCAGCTCC...ACCCGCATCGTGGAAGGGACCTCCCACAAACTGACCTTTGACTCCCCACATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS TCA 90 bp | GGCTCCCCAGGCTCCAGGACCTCAGGAATGAAGATATCTGGCTTCTaGGTCAGGGCTTCCACTTGTAGCCTGAACTCCTCCTTGAAACTG | + |
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Preference number: 5 (lower is better) Translates to: GSPGSRTSGMKISGF*VRASTCSLNSSLKL Trigger: CAGTTTCAAGGAGGAGTTCAGGCTACAAGTGGAAGCCCTGACTCAGAAGCCAGATATCTTCATTCCTGAGGTCCTGGAGCCTGGGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | TGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGTCGCTCTCCATCTGACCTaGAGGCCCATCCAACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: CMCMHRHEPQCTCGESKVALHLT*RPIQQE Trigger: TTCCTGTTGGATGGGCCTCAAGGTCAGATGGAGAGC...GACCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | GTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGTCAATCAGAATAGGTGTCTaGGGGATCCTGGGTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VCACIGMSHSAHVGSQRSIRIGV*GILGLL Trigger: CAGGAGACCCAGGATCCCCAAGACACCTATTCTGAT...TGACCTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | CACATGTGGGGAGTCAAAGGTCAGTTTGTGGGAGGTCCCTTCCACGATGCGGGTGGAAGAAATAGTTTGTaGAGTCTCCCCACTGAACAT | + |
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Preference number: 5 (lower is better) Translates to: HMWGVKGQFVGGPFHDAGGRNSL*SLPTEH Trigger: ATGTTCAGTGGGGAGACTCAACAAACTATTTCTTCC...ACCCGCATCGTGGAAGGGACCTCCCACAAACTGACCTTTGACTCCCCACATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | ACATGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGGCTCTGAAGACTGGATaGGGATCAGGGTCTGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: TCMCMHRHEPQCTCGESKALKTG*GSGSVS Trigger: TGACACAGACCCTGATCCCAATCCAGTCTTCAGAGC...CTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | AGCATCTGCTTTCTTTTGGAGGCTCCCTTAACTACTTTACCATTTAGGTCTCAGGCTCTGGAGGAGCAGTaGCAGTGCAGACCCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: SICFLLEAPLTTLPFRSQALEEQ*QCRPLA Trigger: GGCCAAGGGTCTGCACTGCAACTGCTCCTCCAGAGC...CTGAGACCTAAATGGTAAAGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | GGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCCCCTGTGCGGTCTGCTTTCTaGGAAGGAGACAGCATCCCC | + |
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Preference number: 5 (lower is better) Translates to: GINLRVHQAWWHTYLTPPVRSAF*EGDSIP Trigger: GGGGATGCTGTCTCCTTCCAAGAAAGCAGACCGCAC...AGGGGGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | GGTCCTCGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACCCCAAAACTGCTCCCTaGGAGAATGCTGTGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: GPRDQSKSSSSLVAHIFNPKTAP*ENAVAL Trigger: CAGTGCCACAGCATTCTCCAAGGGAGCAGTTTTGGG...GTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCGAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | CGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACACCCCCAGAAGGAGCTGGGCATaGGTTGAAGGTCCAGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: RDQSKSSSSLVAHIFNTPRRSWA*VEGPGK Trigger: TTTTCCTGGACCTTCAACCAATGCCCAGCTCCTTCT...GGGGGTGTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | ACATGTATGTGCATGCATAGGCATGAGCCACAGTGCACATGTGGGGAGTCAAAGCTCAGTATCATGGTGTaGAAGTCCTGGGATAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: TCMCMHRHEPQCTCGESKLSIMV*KSWDKA Trigger: AGCTTTATCCCAGGACTTCAACACCATGATACTGAG...CTTTGACTCCCCACATGTGCACTGTGGCTCATGCCTATGCATGCACATACATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | AGCATCTGCTTTCTTTTGGAGGCTCCCTTAACTACTTTACCATTTAGGTCTCAGGAAATGTGGGTCCTTTaGCTTCTTCTTTGGTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: SICFLLEAPLTTLPFRSQEMWVL*LLLWFR Trigger: CCTAAACCAAAGAAGAAGCAAAAGGACCCACATTTC...CTGAGACCTAAATGGTAAAGTAGTTAAGGGAGCCTCCAAAAGAAAGCAGATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS-3UTR CAA 90 bp | GGTCCTCGGGATCAATCTAAGAGTTCATCAAGCTTGGTGGCACACATATTTAACTCTAACACTTTATCTTaGTTATTTGTGGCCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: GPRDQSKSSSSLVAHIFNSNTLS*LFVATG Trigger: TCCAGTGGCCACAAATAACAAAGATAAAGTGTTAGA...GTTAAATATGTGTGCCACCAAGCTTGATGAACTCTTAGATTGATCCCGAGGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS CCA 72 bp | AGTCCAGGATCGTGCTGCCCCGGGAGAGCTTGGGCCTaGAGGGTTCCTCCTGGGTTCCTTTCTTCTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: SPGSCCPGRAWA*RVPPGFLSSGG Trigger: CCCTCCAGAAGAAAGGAACCCAGGAGGAACCCTCCAGGCCCAAGCTCTCCCGGGGCAGCACGATCCTGGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS CCA 72 bp | CTGCCCCGGGAGAGCTTGGGCCTGGAGGGTTCCTCCTaGGTTCCTTTCTTCTGGAGGGTCTTCACGATGACC | + |
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Preference number: 6 (lower is better) Translates to: LPRESLGLEGSS*VPFFWRVFTMT Trigger: GGTCATCGTGAAGACCCTCCAGAAGAAAGGAACCCAGGAGGAACCCTCCAGGCCCAAGCTCTCCCGGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS TCA 72 bp | AATTCCGAGCCAGGGACCTGGTCTTGGGGACCACATTaGTGTAGTCCAGGATCGTGCTGCCCCGGGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: NSEPGTWSWGPH*CSPGSCCPGRA Trigger: AGCTCTCCCGGGGCAGCACGATCCTGGACTACATCAATGTGGTCCCCAAGACCAGGTCCCTGGCTCGGAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS CCA 72 bp | TTGGGCCTGGAGGGTTCCTCCTGGGTTCCTTTCTTCTaGAGGGTCTTCACGATGACCACGATGAGGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: LGLEGSSWVPFF*RVFTMTTMRHR Trigger: CCTGTGCCTCATCGTGGTCATCGTGAAGACCCTCCAGAAGAAAGGAACCCAGGAGGAACCCTCCAGGCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS CCA 72 bp | TGGCACTGTCTTTATCAGGTAGCAGCAGGACAGAGGTaGTCTGGGCTCCATGGGTGTTCCAGGACTCACAGC | + |
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Preference number: 6 (lower is better) Translates to: WHCLYQVAAGQR*SGLHGCSRTHS Trigger: GCTGTGAGTCCTGGAACACCCATGGAGCCCAGACCACCTCTGTCCTGCTGCTACCTGATAAAGACAGTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS CAA 72 bp | GTGGACTCTGACCTCTGTGTAATCAGAATAGGTGTCTaGGGGATCCTGGGTCTCCTGCAGTCTCAGGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: VDSDLCVIRIGV*GILGLLQSQAG Trigger: TCCCGCCTGAGACTGCAGGAGACCCAGGATCCCCAAGACACCTATTCTGATTACACAGAGGTCAGAGTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS CCA 72 bp | GTTGAAGGTCCAGGAAAACAAGCAGACAACGGTCACTaGCTCCCCAGGCTCCAGGACCTCAGGAATGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: VEGPGKQADNGH*LPRLQDLRNED Trigger: ATCTTCATTCCTGAGGTCCTGGAGCCTGGGGAGCCAGTGACCGTTGTCTGCTTGTTTTCCTGGACCTTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS TCA 72 bp | TTCCGGGTTATTCTCAGAGACTGGGACCTGAGAGGATaGTGTGGGATCTGGGCAACCAGGGTACGTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: FRVILRDWDLRG*CGIWATRVREM Trigger: CATTTCACGTACCCTGGTTGCCCAGATCCCACATCATCCTCTCAGGTCCCAGTCTCTGAGAATAACCCGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS CCA 72 bp | TGCCAAAGCCCAAAACTGCTCCCTTGGAGAATGCTGTaGCACTGTCTTTATCAGGTAGCAGCAGGACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: CQSPKLLPWRML*HCLYQVAAGQR Trigger: CCTCTGTCCTGCTGCTACCTGATAAAGACAGTGCCACAGCATTCTCCAAGGGAGCAGTTTTGGGCTTTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS CAA 72 bp | AGGAGGGCTGTGATGCCAAAGCCCAAAACTGCTCCCTaGGAGAATGCTGTGGCACTGTCTTTATCAGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RRAVMPKPKTAP*ENAVALSLSGS Trigger: GCTACCTGATAAAGACAGTGCCACAGCATTCTCCAAGGGAGCAGTTTTGGGCTTTGGCATCACAGCCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS CAA 72 bp | ATCTGGGCAACCAGGGTACGTGAAATGTGGGTCCTTTaGCTTCTTCTTTGGTTTAGGGAAGTGAGTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: IWATRVREMWVL*LLLWFREVSVQ Trigger: CTGGACACTCACTTCCCTAAACCAAAGAAGAAGCAAAAGGACCCACATTTCACGTACCCTGGTTGCCCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS TCA 72 bp | ATCATGGTGTTGAAGTCCTGGGATAAAGCTCAGAACTaGGTAATTGGATGTGTGCGGTCTGCTTTCTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: IMVLKSWDKAQN*VIGCVRSAFLE Trigger: TTCCAAGAAAGCAGACCGCACACATCCAATTACTCAGTTCTGAGCTTTATCCCAGGACTTCAACACCATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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| CDS CAA 72 bp | TGTGAAGGATTCTCATGCAAGTCTGGGACTGATACATaGTCATGGAAAATGCTGATAGCAAGAGATCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: CEGFSCKSGTDT*SWKMLIARDLG Trigger: CCCCAGATCTCTTGCTATCAGCATTTTCCATGACAATGTATCAGTCCCAGACTTGCATGAGAATCCTTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005592.7 |
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