Pregenerated sensors for SIGLEC15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091055Ensembl transcript IDs: ENSMUST00000170760.3
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCAGGCTCAGCGCCGTCTGGCACAGCTCGCTGCCCGGCGCCGCGGTaGAGCGGAACACCTGCGGGCCCGCGTACGGCTCGCCCGAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: AGSAPSGTARCPAPR*SGTPAGPRTARPSA Trigger: GGCGCTCGGGCGAGCCGTACGCGGGCCCGCAGGTGTTCCGCTGCACCGCGGCGCCGGGCAGCGAGCTGTGCCAGACGGCGCTGAGCCTGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 90 bp | GTCTGGCACAGCTCGCTGCCCGGCGCCGCGGTGCAGCGGAACACCTaGGGGCCCGCGTACGGCTCGCCCGAGCGCCAGATGGCCGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: VWHSSLPGAAVQRNT*GPAYGSPERQMAVS Trigger: GCTGACGGCCATCTGGCGCTCGGGCGAGCCGTACGCGGGCCCGCAGGTGTTCCGCTGCACCGCGGCGCCGGGCAGCGAGCTGTGCCAGAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 90 bp | GACAGGTCGTTGCGGCGCGGGTTGCCCAGCAGGCGGAAGCGGCCGTaGAGGCTCAGCGCCGTCTGGCACAGCTCGCTGCCCGGCGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: DRSLRRGLPSRRKRP*RLSAVWHSSLPGAA Trigger: CGCGGCGCCGGGCAGCGAGCTGTGCCAGACGGCGCTGAGCCTGCACGGCCGCTTCCGCCTGCTGGGCAACCCGCGCCGCAACGACCTGTC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 90 bp | CGCTGTCCGCCAGGGCGAGGCGCTCGACGCGCAGGGACAGGTCGTTaGGGCGCGGGTTGCCCAGCAGGCGGAAGCGGCCGTGCAGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: RCPPGRGARRAGTGR*GAGCPAGGSGRAGS Trigger: TGAGCCTGCACGGCCGCTTCCGCCTGCTGGGCAACCCGCGCCGCAACGACCTGTCCCTGCGCGTCGAGCGCCTCGCCCTGGCGGACAGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CCA 90 bp | GGGTTGCCCAGCAGGCGGAAGCGGCCGTGCAGGCTCAGCGCCGTCTaGCACAGCTCGCTGCCCGGCGCCGCGGTGCAGCGGAACACCTGC | + |
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Preference number: 5 (lower is better) Translates to: GLPSRRKRPCRLSAV*HSSLPGAAVQRNTC Trigger: GCAGGTGTTCCGCTGCACCGCGGCGCCGGGCAGCGAGCTGTGCCAGACGGCGCTGAGCCTGCACGGCCGCTTCCGCCTGCTGGGCAACCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 90 bp | ACAGGTAGACGCTGGCCTCGGCGCGGCCCAGGCTATTGGCCGCCGTaGACGTGTAGCGGCCGTCGCGGGTCAGCGCGGGCAACTCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: TGRRWPRRGPGYWPP*TCSGRRGSARATRR Trigger: CCGCCGAGTTGCCCGCGCTGACCCGCGACGGCCGCTACACGTGCACGGCGGCCAATAGCCTGGGCCGCGCCGAGGCCAGCGTCTACCTGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 90 bp | AGCACCGCCGCGTCGCCAGCCTCCGCGTTCACCTCCGCGGGCACCTaGATGGACCAGCGCTGCGCCGGGGCACTGTGCGCCTCTGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: STAASPASAFTSAGT*MDQRCAGALCASVL Trigger: CAACACAGAGGCGCACAGTGCCCCGGCGCAGCGCTGGTCCATGCAGGTGCCCGCGGAGGTGAACGCGGAGGCTGGCGACGCGGCGGTGCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CCA 90 bp | GGAAGCGGAACAGGTAGACGCTGGCCTCGGCGCGGCCCAGGCTATTaGCCGCCGTGCACGTGTAGCGGCCGTCGCGGGTCAGCGCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: GSGTGRRWPRRGPGY*PPCTCSGRRGSARA Trigger: TGCCCGCGCTGACCCGCGACGGCCGCTACACGTGCACGGCGGCCAATAGCCTGGGCCGCGCCGAGGCCAGCGTCTACCTGTTCCGCTTCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS TCA 90 bp | AGAGCGCGCGGAAGGCGTGCGCGGGGCCCGGCAGCACCGAGATGTTaGCGATCCGCGGCGCAGCTGCAGTCACGCGCAGACGGACCCCAT | + |
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Preference number: 5 (lower is better) Translates to: RARGRRARGPAAPRC*RSAAQLQSRADGPH Trigger: ATGGGGTCCGTCTGCGCGTGACTGCAGCTGCGCCGCGGATCGTCAACATCTCGGTGCTGCCGGGCCCCGCGCACGCCTTCCGCGCGCTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CCA 90 bp | GGGTCGAGGTTCCGGGGGCGCCGTGGAAGCGGAACAGGTAGACGCTaGCCTCGGCGCGGCCCAGGCTATTGGCCGCCGTGCACGTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: GSRFRGRRGSGTGRR*PRRGPGYWPPCTCS Trigger: GCTACACGTGCACGGCGGCCAATAGCCTGGGCCGCGCCGAGGCCAGCGTCTACCTGTTCCGCTTCCACGGCGCCCCCGGAACCTCGACCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS TCA 90 bp | GTCGGGTGGCACGCGCTCCCAGAATGCCAAGCAGCAGCAAGGCCTTaGGGCCCAGCGCGCCCAGCAGGAGCGCTAGGGTCGAGGTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: VGWHALPECQAAARP*GPARPAGALGSRFR Trigger: CCGGAACCTCGACCCTAGCGCTCCTGCTGGGCGCGCTGGGCCTCAAGGCCTTGCTGCTGCTTGGCATTCTGGGAGCGCGTGCCACCCGAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 90 bp | CCAGCCTCCGCGTTCACCTCCGCGGGCACCTGCATGGACCAGCGCTaGGCCGGGGCACTGTGCGCCTCTGTGTTGAGCAGATCCCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: PASAFTSAGTCMDQR*AGALCASVLSRSPE Trigger: TTCGGGGGATCTGCTCAACACAGAGGCGCACAGTGCCCCGGCGCAGCGCTGGTCCATGCAGGTGCCCGCGGAGGTGAACGCGGAGGCTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 90 bp | CGCGGGGCCCGGCAGCACCGAGATGTTGACGATCCGCGGCGCAGCTaGAGTCACGCGCAGACGGACCCCATGGCGACTCTCATAGCGATC | + |
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Preference number: 5 (lower is better) Translates to: RGARQHRDVDDPRRS*SHAQTDPMATLIAI Trigger: GATCGCTATGAGAGTCGCCATGGGGTCCGTCTGCGCGTGACTGCAGCTGCGCCGCGGATCGTCAACATCTCGGTGCTGCCGGGCCCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 90 bp | ACCTCCGCGGGCACCTGCATGGACCAGCGCTGCGCCGGGGCACTGTaGGCCTCTGTGTTGAGCAGATCCCCCGAAGCGTCTCTTCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: TSAGTCMDQRCAGAL*ASVLSRSPEASLLV Trigger: AACTAGAAGAGACGCTTCGGGGGATCTGCTCAACACAGAGGCGCACAGTGCCCCGGCGCAGCGCTGGTCCATGCAGGTGCCCGCGGAGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CCA 90 bp | ATGGCTGAGGAGTTCCTCACAGCAAACACGTGGCAGCTGGTGGCCTaGAGGACTCATCTGGCTCAAATTTTCATAATTGGACTCCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: MAEEFLTANTWQLVA*RTHLAQIFIIGLLS Trigger: GCTCAGGAGTCCAATTATGAAAATTTGAGCCAGATGAGTCCTCCAGGCCACCAGCTGCCACGTGTTTGCTGTGAGGAACTCCTCAGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CCA 72 bp | GTGACCCTGGCCCTGCAGGGCAGCGGAGCTGTTGCCTaGGGCGGGACCCGACCAGGCGAGGGCGGGCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: VTLALQGSGAVA*GGTRPGEGGRG Trigger: CCCCCGCCCGCCCTCGCCTGGTCGGGTCCCGCCCCAGGCAACAGCTCCGCTGCCCTGCAGGGCCAGGGTCAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 72 bp | AGCTCGCTGCCCGGCGCCGCGGTGCAGCGGAACACCTaGGGGCCCGCGTACGGCTCGCCCGAGCGCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: SSLPGAAVQRNT*GPAYGSPERQM Trigger: CATCTGGCGCTCGGGCGAGCCGTACGCGGGCCCGCAGGTGTTCCGCTGCACCGCGGCGCCGGGCAGCGAGCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 72 bp | GGCCGTGCAGGCTCAGCGCCGTCTGGCACAGCTCGCTaGCCGGCGCCGCGGTGCAGCGGAACACCTGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: GRAGSAPSGTAR*PAPRCSGTPAG Trigger: GCCCGCAGGTGTTCCGCTGCACCGCGGCGCCGGGCAGCGAGCTGTGCCAGACGGCGCTGAGCCTGCACGGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 72 bp | CGCTGGCCTCGGCGCGGCCCAGGCTATTGGCCGCCGTaGACGTGTAGCGGCCGTCGCGGGTCAGCGCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RWPRRGPGYWPP*TCSGRRGSARA Trigger: TGCCCGCGCTGACCCGCGACGGCCGCTACACGTGCACGGCGGCCAATAGCCTGGGCCGCGCCGAGGCCAGCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CCA 72 bp | CCTGCGGGCCCGCGTACGGCTCGCCCGAGCGCCAGATaGCCGTCAGCGGCCCGTCGTAGTGGCGGTGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: PAGPRTARPSAR*PSAARRSGGAG Trigger: ACCCGCACCGCCACTACGACGGGCCGCTGACGGCCATCTGGCGCTCGGGCGAGCCGTACGCGGGCCCGCAGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CAA 72 bp | GCCAGGGCGAGGCGCTCGACGCGCAGGGACAGGTCGTaGCGGCGCGGGTTGCCCAGCAGGCGGAAGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: ARARRSTRRDRS*RRGLPSRRKRP Trigger: CGGCCGCTTCCGCCTGCTGGGCAACCCGCGCCGCAACGACCTGTCCCTGCGCGTCGAGCGCCTCGCCCTGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CAA 90 bp | CCGCTGTCCGCCAGGGCGAGGCGCTCGACGCGCAGGGACAGGTCGTaGCGGCGCGGGTTGCCCAGCAGGCGGAAGCGGCCGTGCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: PLSARARRSTRRDRS*RRGLPSRRKRPCRL Trigger: GAGCCTGCACGGCCGCTTCCGCCTGCTGGGCAACCCGCGCCGCAACGACCTGTCCCTGCGCGTCGAGCGCCTCGCCCTGGCGGACAGCGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 72 bp | GCGTCGCCAGCCTCCGCGTTCACCTCCGCGGGCACCTaGATGGACCAGCGCTGCGCCGGGGCACTGTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: ASPASAFTSAGT*MDQRCAGALCA Trigger: GGCGCACAGTGCCCCGGCGCAGCGCTGGTCCATGCAGGTGCCCGCGGAGGTGAACGCGGAGGCTGGCGACGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 72 bp | CCAGGGCGAGGCGCTCGACGCGCAGGGACAGGTCGTTaGGGCGCGGGTTGCCCAGCAGGCGGAAGCGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: PGRGARRAGTGR*GAGCPAGGSGR Trigger: ACGGCCGCTTCCGCCTGCTGGGCAACCCGCGCCGCAACGACCTGTCCCTGCGCGTCGAGCGCCTCGCCCTGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 72 bp | GCTCGACGCGCAGGGACAGGTCGTTGCGGCGCGGGTTaGCCAGCAGGCGGAAGCGGCCGTGCAGGCTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: ARRAGTGRCGAG*PAGGSGRAGSA Trigger: CGCTGAGCCTGCACGGCCGCTTCCGCCTGCTGGGCAACCCGCGCCGCAACGACCTGTCCCTGCGCGTCGAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 72 bp | GGCTCCCCCTCGGCGGTGCAGAGCGCGCGGAAGGCGTaGGCGGGGCCCGGCAGCACCGAGATGTTGACGATC | + |
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Preference number: 6 (lower is better) Translates to: GSPSAVQSARKA*AGPGSTEMLTI Trigger: GATCGTCAACATCTCGGTGCTGCCGGGCCCCGCGCACGCCTTCCGCGCGCTCTGCACCGCCGAGGGGGAGCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CAA 72 bp | CGCTCGACGCGCAGGGACAGGTCGTTGCGGCGCGGGTaGCCCAGCAGGCGGAAGCGGCCGTGCAGGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSTRRDRSLRRG*PSRRKRPCRLS Trigger: GCTGAGCCTGCACGGCCGCTTCCGCCTGCTGGGCAACCCGCGCCGCAACGACCTGTCCCTGCGCGTCGAGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CCA 72 bp | TTCCGGGGGCGCCGTGGAAGCGGAACAGGTAGACGCTaGCCTCGGCGCGGCCCAGGCTATTGGCCGCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: FRGRRGSGTGRR*PRRGPGYWPPC Trigger: GCACGGCGGCCAATAGCCTGGGCCGCGCCGAGGCCAGCGTCTACCTGTTCCGCTTCCACGGCGCCCCCGGAA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CAA 90 bp | CAGAGCGCGCGGAAGGCGTGCGCGGGGCCCGGCAGCACCGAGATGTaGACGATCCGCGGCGCAGCTGCAGTCACGCGCAGACGGACCCCA | + |
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Preference number: 6 (lower is better) Translates to: QSARKACAGPGSTEM*TIRGAAAVTRRRTP Trigger: TGGGGTCCGTCTGCGCGTGACTGCAGCTGCGCCGCGGATCGTCAACATCTCGGTGCTGCCGGGCCCCGCGCACGCCTTCCGCGCGCTCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS TCA 72 bp | GGAAGGCGTGCGCGGGGCCCGGCAGCACCGAGATGTTaGCGATCCGCGGCGCAGCTGCAGTCACGCGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: GRRARGPAAPRC*RSAAQLQSRAD Trigger: GTCTGCGCGTGACTGCAGCTGCGCCGCGGATCGTCAACATCTCGGTGCTGCCGGGCCCCGCGCACGCCTTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CCA 72 bp | ACAGGTAGACGCTGGCCTCGGCGCGGCCCAGGCTATTaGCCGCCGTGCACGTGTAGCGGCCGTCGCGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TGRRWPRRGPGY*PPCTCSGRRGS Trigger: TGACCCGCGACGGCCGCTACACGTGCACGGCGGCCAATAGCCTGGGCCGCGCCGAGGCCAGCGTCTACCTGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CAA 72 bp | CGGAAGGCGTGCGCGGGGCCCGGCAGCACCGAGATGTaGACGATCCGCGGCGCAGCTGCAGTCACGCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RKACAGPGSTEM*TIRGAAAVTRR Trigger: TCTGCGCGTGACTGCAGCTGCGCCGCGGATCGTCAACATCTCGGTGCTGCCGGGCCCCGCGCACGCCTTCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CAA 90 bp | CGTCGGGTGGCACGCGCTCCCAGAATGCCAAGCAGCAGCAAGGCCTaGAGGCCCAGCGCGCCCAGCAGGAGCGCTAGGGTCGAGGTTCCG | + |
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Preference number: 6 (lower is better) Translates to: RRVARAPRMPSSSKA*RPSAPSRSARVEVP Trigger: CGGAACCTCGACCCTAGCGCTCCTGCTGGGCGCGCTGGGCCTCAAGGCCTTGCTGCTGCTTGGCATTCTGGGAGCGCGTGCCACCCGACG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS TCA 72 bp | CACGCGCTCCCAGAATGCCAAGCAGCAGCAAGGCCTTaGGGCCCAGCGCGCCCAGCAGGAGCGCTAGGGTCG | + |
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Preference number: 6 (lower is better) Translates to: HALPECQAAARP*GPARPAGALGS Trigger: CGACCCTAGCGCTCCTGCTGGGCGCGCTGGGCCTCAAGGCCTTGCTGCTGCTTGGCATTCTGGGAGCGCGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 72 bp | GCGTTCACCTCCGCGGGCACCTGCATGGACCAGCGCTaGGCCGGGGCACTGTGCGCCTCTGTGTTGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: AFTSAGTCMDQR*AGALCASVLSR Trigger: TCTGCTCAACACAGAGGCGCACAGTGCCCCGGCGCAGCGCTGGTCCATGCAGGTGCCCGCGGAGGTGAACGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CAA 72 bp | GCACGCGCTCCCAGAATGCCAAGCAGCAGCAAGGCCTaGAGGCCCAGCGCGCCCAGCAGGAGCGCTAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: ARAPRMPSSSKA*RPSAPSRSARV Trigger: GACCCTAGCGCTCCTGCTGGGCGCGCTGGGCCTCAAGGCCTTGCTGCTGCTTGGCATTCTGGGAGCGCGTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 72 bp | GGCACCTGCATGGACCAGCGCTGCGCCGGGGCACTGTaGGCCTCTGTGTTGAGCAGATCCCCCGAAGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: GTCMDQRCAGAL*ASVLSRSPEAS Trigger: AGACGCTTCGGGGGATCTGCTCAACACAGAGGCGCACAGTGCCCCGGCGCAGCGCTGGTCCATGCAGGTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS GCA 72 bp | CGGCAGCACCGAGATGTTGACGATCCGCGGCGCAGCTaGAGTCACGCGCAGACGGACCCCATGGCGACTCTC | + |
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Preference number: 6 (lower is better) Translates to: RQHRDVDDPRRS*SHAQTDPMATL Trigger: GAGAGTCGCCATGGGGTCCGTCTGCGCGTGACTGCAGCTGCGCCGCGGATCGTCAACATCTCGGTGCTGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CCA 72 bp | ATGGTGATGGCTGAGGAGTTCCTCACAGCAAACACGTaGCAGCTGGTGGCCTGGAGGACTCATCTGGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: MVMAEEFLTANT*QLVAWRTHLAQ Trigger: TTGAGCCAGATGAGTCCTCCAGGCCACCAGCTGCCACGTGTTTGCTGTGAGGAACTCCTCAGCCATCACCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CCA 72 bp | GAAGCGTCTCTTCTAGTTTTCACAAGGGATCCCATCTaGAGCACACAGGCCAAGCAGGCCAGGAGTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: EASLLVFTRDPI*STQAKQARSWR Trigger: CCTCCAACTCCTGGCCTGCTTGGCCTGTGTGCTCCAGATGGGATCCCTTGTGAAAACTAGAAGAGACGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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| CDS CCA 72 bp | TGGCTGAGGAGTTCCTCACAGCAAACACGTGGCAGCTaGTGGCCTGGAGGACTCATCTGGCTCAAATTTTCA | + |
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Preference number: 6 (lower is better) Translates to: WLRSSSQQTRGS*WPGGLIWLKFS Trigger: TGAAAATTTGAGCCAGATGAGTCCTCCAGGCCACCAGCTGCCACGTGTTTGCTGTGAGGAACTCCTCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170760.3 |
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