RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIGLEC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027322

Ensembl transcript IDs: ENSMUST00000028794.10, ENSMUST00000110226.2, ENSMUST00000110227.8

Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAACCCCACTCCCACCCCATAAAGCAGAGGCCTCCTGGAGTCACCTaGTTTGCCTCATCCCATTCCCAGGTGCCCTCCAGATATTATACC +
Preference number: 1 (lower is better)
Translates to: EPHSHPIKQRPPGVT*FASSHSQVPSRYYT
Trigger: GGTATAATATCTGGAGGGCACCTGGGAATGGGATGAGGCAAAGCAGGTGACTCCAGGAGGCCTCTGCTTTATGGGGTGGGAGTGGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
3UTR CCA 90 bp AAGAGAAAGGCAAAGGGATACAGAGGAAAACCACACAGAGAGACGTaGGCAACATGGCTGAGTCCGTCTCAGAGCCCTGGAGGCGGCAGG +
Preference number: 1 (lower is better)
Translates to: KRKAKGYRGKPHRET*ATWLSPSQSPGGGR
Trigger: CCTGCCGCCTCCAGGGCTCTGAGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCCCTTTGCCTTTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR GCA 90 bp AGAGGCCTCCTGGAGTCACCTGCTTTGCCTCATCCCATTCCCAGGTaGCCTCCAGATATTATACCACCTGTGAGTGGATACTGTTGTGGG +
Preference number: 1 (lower is better)
Translates to: RGLLESPALPHPIPR*PPDIIPPVSGYCCG
Trigger: CCCACAACAGTATCCACTCACAGGTGGTATAATATCTGGAGGGCACCTGGGAATGGGATGAGGCAAAGCAGGTGACTCCAGGAGGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
3UTR CCA 90 bp GTTGGGTGGGGTGCAATTGCACACACAGTCCATGGACCATGGGGATaGGTATGTCTTCCCTTCACTCTTCCTTCTCCCTGTAGGGTCCAT +
Preference number: 1 (lower is better)
Translates to: VGWGAIAHTVHGPWG*VCLPFTLPSPCRVH
Trigger: ATGGACCCTACAGGGAGAAGGAAGAGTGAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTGCAATTGCACCCCACCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR TCA 90 bp ATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCTGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACT +
Preference number: 1 (lower is better)
Translates to: ILLWMVVSHHVVAGI*TPDLRKSSRVLLPT
Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
3UTR-3UTR CCA 90 bp CTTCCCTTCACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGCCACACAGAGAGACGTaGGCAACATGGCTGAGTCCG +
Preference number: 2 (lower is better)
Translates to: LPFTLPSPCRVHGHCSYLPHRET*ATWLSP
Trigger: CGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGG...CAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGTGAAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR-3UTR TCA 90 bp TGGGTATGTCTTCCCTTCACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCGTCCAAGGTGAGCTTTaGAGAGAAAGGCAAAGGGAT +
Preference number: 2 (lower is better)
Translates to: WVCLPFTLPSPCRVHGHCVQGEL*RERQRD
Trigger: ATCCCTTTGCCTTTCTCTTCAAAGCTCACCTTGGAC...GCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGTGAAGGGAAGACATACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR-3UTR CCA 90 bp TCCCACCCCATAAAGCAGAGGCCTCCTGGAGTCACCTGCTTTGCCTCATCCCATTATACCACCTGTGAGTaGATACTGTTGTGGGTATGG +
Preference number: 2 (lower is better)
Translates to: SHPIKQRPPGVTCFASSHYTTCE*ILLWVW
Trigger: CCATACCCACAACAGTATCCACTCACAGGTGGTATA...ATGGGATGAGGCAAAGCAGGTGACTCCAGGAGGCCTCTGCTTTATGGGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
3UTR CAA 90 bp TTCAGCATGGTATGTTTATGTGACCAGTTTCTAGCGGATGAGAAGTaGGGTGGGGTGCAATTGCACACACAGTCCATGGACCATGGGGAT +
Preference number: 2 (lower is better)
Translates to: FSMVCLCDQFLADEK*GGVQLHTQSMDHGD
Trigger: ATCCCCATGGTCCATGGACTGTGTGTGCAATTGCACCCCACCCAACTTCTCATCCGCTAGAAACTGGTCACATAAACATACCATGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR CAA 90 bp CCATGGGCACTGCAGTTACCTGAGCTTCATAATCAAAGGCAACACTaGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTGATACCACAA +
Preference number: 2 (lower is better)
Translates to: PWALQLPELHNQRQH*GNGENQARRILIPQ
Trigger: TTGTGGTATCAGAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAAGCTCAGGTAACTGCAGTGCCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR-3UTR CCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTCCACAGAATTGTAAATaGGATAGCTTGTTTCCAAGC +
Preference number: 2 (lower is better)
Translates to: RRGSQILLWMVVSHHVVAPQNCK*DSLFPS
Trigger: GCTTGGAAACAAGCTATCCCATTTACAATTCTGTGG...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
3UTR-3UTR CAA 90 bp AGTCCGTCTCAGAGCCCTGGAGGCGGCAGGTTGACCTCCAACCCCAAACCTCCCGAGGTAGGCAGGATCTaGTTCACAGCACCTGAGTTG +
Preference number: 3 (lower is better)
Translates to: SPSQSPGGGRLTSNPKPPEVGRI*FTAPEL
Trigger: CAACTCAGGTGCTGTGAACAAGATCCTGCCTACCTC...GGGAGGTTTGGGGTTGGAGGTCAACCTGCCGCCTCCAGGGCTCTGAGACGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR GCA 72 bp TCCCACCCCATAAAGCAGAGGCCTCCTGGAGTCACCTaGTTTGCCTCATCCCATTCCCAGGTGCCCTCCAGA +
Preference number: 3 (lower is better)
Translates to: SHPIKQRPPGVT*FASSHSQVPSR
Trigger: TCTGGAGGGCACCTGGGAATGGGATGAGGCAAAGCAGGTGACTCCAGGAGGCCTCTGCTTTATGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
3UTR CCA 72 bp TACAGAGGAAAACCACACAGAGAGACGTGGGCAACATaGCTGAGTCCGTCTCAGAGCCCTGGAGGCGGCAGG +
Preference number: 3 (lower is better)
Translates to: YRGKPHRETWAT*LSPSQSPGGGR
Trigger: CCTGCCGCCTCCAGGGCTCTGAGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR TCA 72 bp TGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCTGACCTTCGGAAGAGCAGTCGGGTGCTC +
Preference number: 3 (lower is better)
Translates to: WMVVSHHVVAGI*TPDLRKSSRVL
Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
3UTR CCA 72 bp GGGTGGGGTGCAATTGCACACACAGTCCATGGACCATaGGGATGGGTATGTCTTCCCTTCACTCTTCCTTCT +
Preference number: 3 (lower is better)
Translates to: GWGAIAHTVHGP*GWVCLPFTLPS
Trigger: AGAAGGAAGAGTGAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTGCAATTGCACCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR-3UTR CAA 90 bp GATATCCTGGCTGGTACAGACCGTCTTAGAAAGTCTGTGAGAAACTGGATGTTGCCTGGAGGCGGCAGGTaGACCTCCAACCCCAAACCT +
Preference number: 3 (lower is better)
Translates to: DILAGTDRLRKSVRNWMLPGGGR*TSNPKP
Trigger: AGGTTTGGGGTTGGAGGTCAACCTGCCGCCTCCAGG...CAACATCCAGTTTCTCACAGACTTTCTAAGACGGTCTGTACCAGCCAGGATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR CCA 72 bp GGTGCAATTGCACACACAGTCCATGGACCATGGGGATaGGTATGTCTTCCCTTCACTCTTCCTTCTCCCTGT +
Preference number: 3 (lower is better)
Translates to: GAIAHTVHGPWG*VCLPFTLPSPC
Trigger: ACAGGGAGAAGGAAGAGTGAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTGCAATTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR CCA 72 bp AGAAGTTGGGTGGGGTGCAATTGCACACACAGTCCATaGACCATGGGGATGGGTATGTCTTCCCTTCACTCT +
Preference number: 3 (lower is better)
Translates to: RSWVGCNCTHSP*TMGMGMSSLHS
Trigger: AGAGTGAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTGCAATTGCACCCCACCCAACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR GCA 72 bp AGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTaGTTATACAGAGGTAGGCAGGATCTTGTTCACAGC +
Preference number: 3 (lower is better)
Translates to: SRAGQESQMSLY*LYRGRQDLVHS
Trigger: GCTGTGAACAAGATCCTGCCTACCTCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR CCA 72 bp CTCAGACACTCCAGAAGAGGGAGTCAGATCTTGTTATaGATGGTTGTGAGCCACCATGTGGTTGCTGGGATT +
Preference number: 3 (lower is better)
Translates to: LRHSRRGSQILL*MVVSHHVVAGI
Trigger: AATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGAGTGTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
3UTR GCA 72 bp TTCACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTaGAGTTACCTGAGCTTCATAATCAAAGGCAACACT +
Preference number: 3 (lower is better)
Translates to: FTLPSPCRVHGH*SYLSFIIKGNT
Trigger: AGTGTTGCCTTTGATTATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR-3UTR CAA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGTGTAAATGGGATAGCTaGTTTCCAAGCAGTAACTGC +
Preference number: 3 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWCKWDS*FPSSNC
Trigger: GCAGTTACTGCTTGGAAACAAGCTATCCCATTTACA...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
3UTR TCA 72 bp ACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTaGTACCACAACAACATAACCAGGCCAGGAGGGAAA +
Preference number: 3 (lower is better)
Translates to: TWGMEKIKQEGF*YHNNITRPGGK
Trigger: TTTCCCTCCTGGCCTGGTTATGTTGTTGTGGTATCAGAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp AGTCCGTCTCAGAGCCCTGGAGGCGGCAGGTTGACCTCCAACCCCAAACCTCCCGCTGGTCACCATGGCTaGGAGTTAGCTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SPSQSPGGGRLTSNPKPPAGHHG*ELAGQV
Trigger: CACCTGCCCAGCTAACTCTCAGCCATGGTGACCAGC...GGGAGGTTTGGGGTTGGAGGTCAACCTGCCGCCTCCAGGGCTCTGAGACGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp AGTCCGTCTCAGAGCCCTGGAGGCGGCAGGTTGACCTCCAACCCCAAACCTCCCGTGACTGCAGGCAGGTaGAAGGTTGAGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: SPSQSPGGGRLTSNPKPPVTAGR*KVEAWA
Trigger: TGCCCATGCCTCAACCTTGCACCTGCCTGCAGTCAC...GGGAGGTTTGGGGTTGGAGGTCAACCTGCCGCCTCCAGGGCTCTGAGACGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp AGTCCGTCTCAGAGCCCTGGAGGCGGCAGGTTGACCTCCAACCCCAAACCTCCCGTCATCCTCCAGCTCTaGAAAGTGGATCTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SPSQSPGGGRLTSNPKPPVILQL*KVDLQA
Trigger: CGCCTGCAGATCCACTTTCCAGAGCTGGAGGATGAC...GGGAGGTTTGGGGTTGGAGGTCAACCTGCCGCCTCCAGGGCTCTGAGACGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp CTTCCCTTCACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGGGCATAGAGGGCGGATaGGAGGGCAGCAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LPFTLPSPCRVHGHCSYLGIEGG*EGSRVL
Trigger: GAGGACCCTGCTGCCCTCTCATCCGCCCTCTATGCC...CAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGTGAAGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp AGTCCGTCTCAGAGCCCTGGAGGCGGCAGGTTGACCTCCAACCCCAAACCTCCCGGTCACTTTGTACACTaGACACCAGGTGGCCTAGTC +
Preference number: 4 (lower is better)
Translates to: SPSQSPGGGRLTSNPKPPGHFVH*TPGGLV
Trigger: GACTAGGCCACCTGGTGTGCAGTGTACAAAGTGACC...GGGAGGTTTGGGGTTGGAGGTCAACCTGCCGCCTCCAGGGCTCTGAGACGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp AGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTCAGAGCCTGGAGGTGACAGAGTaGGTGGGGTCCTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: RGKPHRETWATWLSPSQSLEVTE*VGSWPR
Trigger: GCGAGGCCAGGACCCCACCCACTCTGTCACCTCCAG...GCTCTGAGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCCTGGAGGTGACAGAGTaGGTGGGGTCCTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCLEVTE*VGSWPR
Trigger: GCGAGGCCAGGACCCCACCCACTCTGTCACCTCCAG...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp TCCCACCCCATAAAGCAGAGGCCTCCTGGAGTCACCTGCTTTGCCTCATCCCATGCGCCCAATGAGAACTaGCAGAGCAGGGTCCGACCG +
Preference number: 4 (lower is better)
Translates to: SHPIKQRPPGVTCFASSHAPNEN*QSRVRP
Trigger: CGGTCGGACCCTGCTCTGCCAGTTCTCATTGGGCGC...ATGGGATGAGGCAAAGCAGGTGACTCCAGGAGGCCTCTGCTTTATGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
3UTR CAA 72 bp TGGCTGAGTCCGTCTCAGAGCCCTGGAGGCGGCAGGTaGACCTCCAACCCCAAACCTCCCTTCGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: WLSPSQSPGGGR*TSNPKPPFVHF
Trigger: AAAATGGACGAAGGGAGGTTTGGGGTTGGAGGTCAACCTGCCGCCTCCAGGGCTCTGAGACGGACTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp TCCCACCCCATAAAGCAGAGGCCTCCTGGAGTCACCTGCTTTGCCTCATCCCATCCCACTGCACGGCACTaGCAGCAGGATAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SHPIKQRPPGVTCFASSHPTARH*QQDSCC
Trigger: ACAGCAGCTATCCTGCTGTCAGTGCCGTGCAGTGGG...ATGGGATGAGGCAAAGCAGGTGACTCCAGGAGGCCTCTGCTTTATGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR TCA 90 bp TGGGTATGTCTTCCCTTCACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCACGGCCATGTGGCCCTaGCCCACATCTAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: WVCLPFTLPSPCRVHGHCTAMWP*PTSRRA
Trigger: AGCCCTCCTAGATGTGGGTCAGGGCCACATGGCCGT...GCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGTGAAGGGAAGACATACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp GGTGCAATTGCACACACAGTCCATGGACCATGGGGATGGGTATGTCTTCCCTTCAGGACACATGGAGGCTaGCAGGGGCAGCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GAIAHTVHGPWGWVCLPFRTHGG*QGQPGW
Trigger: CCAGCCTGGCTGCCCCTGTCAGCCTCCATGTGTCCT...GAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTGCAATTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp CTTCCCTTCACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGGCGCCCAATGAGAACTaGCAGAGCAGGGTCCGACCG +
Preference number: 4 (lower is better)
Translates to: LPFTLPSPCRVHGHCSYLAPNEN*QSRVRP
Trigger: CGGTCGGACCCTGCTCTGCCAGTTCTCATTGGGCGC...CAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGTGAAGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GGATACAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTCTCAGGACCACAGCCTaGCCCTCCCGGAGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GYRGKPHRETWATWLSPSLRTTA*PSRSSG
Trigger: ACCTGAGCTCCGGGAGGGCCAGGCTGTGGTCCTGAG...AGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCAGGAAGAGTTGCCCGTaGGCCCAGAGCCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCRKSCP*AQSHQG
Trigger: TCCCTGGTGGCTCTGGGCCCACGGGCAACTCTTCCT...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGACAGGAGCCGAGAGCTaGGCCCCATCCTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRTGAES*APSSVR
Trigger: CCTCACCGAGGATGGGGCTCAGCTCTCGGCTCCTGT...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCAGGGGGCGGCCATCCTaGTACCAGCTGTATGAGGTC +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCRGRPS*YQLYEV
Trigger: GACCTCATACAGCTGGTATCAGGATGGCCGCCCCCT...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp CCAGGCCAGGAGGGAAAACTAAGACCCTGTCATGCTGTGGTCACTGTATTGAGTGGCTCAGGCCACTCCTaGAGCTCAGGGTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: PGQEGKLRPCHAVVTVLSGSGHS*SSGSPP
Trigger: AGGCGGTGACCCTGAGCTGCAGGAGTGGCCTGAGCC...ACTCAATACAGTGACCACAGCATGACAGGGTCTTAGTTTTCCCTCCTGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp TGGAGTCACCTGCTTTGCCTCATCCCATTCCCAGGTGCCCTCCAGATATTATACCTGGAGGTGACAGAGTaGGTGGGGTCCTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: WSHLLCLIPFPGALQILYLEVTE*VGSWPR
Trigger: GCGAGGCCAGGACCCCACCCACTCTGTCACCTCCAG...GTATAATATCTGGAGGGCACCTGGGAATGGGATGAGGCAAAGCAGGTGACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CCA 90 bp GGATACAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTGCGAGTGTCAGGAGCTaGGCTCAGGCCACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GYRGKPHRETWATWLSPSASVRS*AQATPA
Trigger: TGCAGGAGTGGCCTGAGCCCAGCTCCTGACACTCGC...AGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp AGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTCAGAGCTGGAGAAGCCGTAGCTaGGCTGGGGGATCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RGKPHRETWATWLSPSQSWRSRS*AGGSLS
Trigger: AGACAGCGATCCCCCAGCCCAGCTACGGCTTCTCCA...GCTCTGAGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GGATACAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTCCATGGGAGGGACGCTaGGGTTCCAAGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GYRGKPHRETWATWLSPSPWEGR*GSKLVA
Trigger: GGCCACCAACTTGGAACCCCAGCGTCCCTCCCATGG...AGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp TGGGTATGTCTTCCCTTCACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCCTAGCTGCAGGGAGTTaGCTGTGGCCTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: WVCLPFTLPSPCRVHGHCLAAGS*LWPWPG
Trigger: TCCAGGCCAAGGCCACAGCCAACTCCCTGCAGCTAG...GCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGTGAAGGGAAGACATACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGCGTGAGGCCTCCGTGTaGCAGCACCACAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRREASV*QHHSSQ
Trigger: CTGGCTACTGTGGTGCTGTCACACGGAGGCCTCACG...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp GGATACAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTAGGGGGCGGCCATCCTaGTACCAGCTGTATGAGGTC +
Preference number: 4 (lower is better)
Translates to: GYRGKPHRETWATWLSPSRGRPS*YQLYEV
Trigger: GACCTCATACAGCTGGTATCAGGATGGCCGCCCCCT...AGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp CTTCCCTTCACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGCCATGTGTAGCTGAGTaGGTCCTGGTGGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPFTLPSPCRVHGHCSYLPCVAE*VLVGAP
Trigger: TGGAGCACCCACCAGGACTCACTCAGCTACACATGG...CAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGTGAAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGCACCAGGAACTGGAGTaGGGAAGCCGGTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRHQELE*GSRSLL
Trigger: CAGGAGGGACCGGCTTCCTCACTCCAGTTCCTGGTG...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCGACTGGAGCGCTCACTaGCCTGGGCATTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCDWSAH*PGHSAL
Trigger: AAGTGCAGAATGCCCAGGGCAGTGAGCGCTCCAGTC...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCGGGAGCACAGTCACATaGAGCCGGGGATTACTGCCT +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCGSTVT*SRGLLP
Trigger: AGGCAGTAATCCCCGGCTGCATGTGACTGTGCTCCC...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp GGATACAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTACCTGCTGCCCCTCTTaGACAGTGGCATTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GYRGKPHRETWATWLSPSTCCPS*TVALGH
Trigger: GTGGCCCAATGCCACTGTGCAAGAGGGGCAGCAGGT...AGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCCAGGTCAGGTTCACCTaGTGCCCCTCTTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCQVRFT*CPSCTV
Trigger: CACTGTGCAAGAGGGGCAGCAGGTGAACCTGACCTG...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp CTCCCACCCCATAAAGCAGAGGCCTCCTGGAGTCACCTGCTTTGCCTCATCCCATGGAGACACCCCATGTaGTCTGGCCTAGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LPPHKAEASWSHLLCLIPWRHPM*SGLVRR
Trigger: TCTTCTCACTAGGCCAGACCACATGGGGTGTCTCCA...TGGGATGAGGCAAAGCAGGTGACTCCAGGAGGCCTCTGCTTTATGGGGTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CCA 90 bp TCCCACCCCATAAAGCAGAGGCCTCCTGGAGTCACCTGCTTTGCCTCATCCCATAGCCCTGCACATTCTTaGGACTGGAGACACCCCATG +
Preference number: 4 (lower is better)
Translates to: SHPIKQRPPGVTCFASSHSPAHS*DWRHPM
Trigger: CATGGGGTGTCTCCAGTCCCAAGAATGTGCAGGGCT...ATGGGATGAGGCAAAGCAGGTGACTCCAGGAGGCCTCTGCTTTATGGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CCA 90 bp TCCCACCCCATAAAGCAGAGGCCTCCTGGAGTCACCTGCTTTGCCTCATCCCATGATGCCATTGGACACTaGGACATCGGCAGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: SHPIKQRPPGVTCFASSHDAIGH*DIGRVA
Trigger: AGCTACCCTGCCGATGTCCCAGTGTCCAATGGCATC...ATGGGATGAGGCAAAGCAGGTGACTCCAGGAGGCCTCTGCTTTATGGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CCA 90 bp TCCAGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGAGTGGGTGGGGTCCTaGCCTCGCCACTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SRRGSQILLWMVVSHHVVEWVGS*PRHCRL
Trigger: CAGCCTGCAGTGGCGAGGCCAGGACCCCACCCACTC...AACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp GGTGCAATTGCACACACAGTCCATGGACCATGGGGATGGGTATGTCTTCCCTTCGCTGGGGTTCCAAGTTaGTGGCCAGGAGATGGTCCC +
Preference number: 4 (lower is better)
Translates to: GAIAHTVHGPWGWVCLPFAGVPS*WPGDGP
Trigger: GGGACCATCTCCTGGCCACCAACTTGGAACCCCAGC...GAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTGCAATTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGCCATGGGAGGGACGCTaGGGTTCCAAGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRPWEGR*GSKLVA
Trigger: GGCCACCAACTTGGAACCCCAGCGTCCCTCCCATGG...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCGCCCCTCTTGCACAGTaGCATTGGGCCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCAPLAQ*HWATQS
Trigger: TGACTGTGTGGCCCAATGCCACTGTGCAAGAGGGGC...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp CACACAGTCCATGGACCATGGGGATGGGTATGTCTTCCCTTCACTCTTCCTTCTAGGAAGAGTTGCCCGTaGGCCCAGAGCCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: HTVHGPWGWVCLPFTLPSRKSCP*AQSHQG
Trigger: TCCCTGGTGGCTCTGGGCCCACGGGCAACTCTTCCT...AGAAGGAAGAGTGAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCGACACGGAGCATAACTaGAGCAGAGGTAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCDTEHN*SRGSGP
Trigger: GGGGCCACTACCTCTGCTCCAGTTATGCTCCGTGTC...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp CTTCCCTTCACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGACCCAGAGCAGCCTCTaGAACAGCTGCAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LPFTLPSPCRVHGHCSYLTQSSL*NSCSWC
Trigger: GCACCAACTGCAGCTGTTCCAGAGGCTGCTCTGGGT...CAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGTGAAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp AGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTCAGAGCAAGGATGTTCCTCCCTaGGGAGCTGAGGAGGATCTC +
Preference number: 4 (lower is better)
Translates to: RGKPHRETWATWLSPSQSKDVPP*GAEEDL
Trigger: GAGATCCTCCTCAGCTCCTCAGGGAGGAACATCCTT...GCTCTGAGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp GCTTGGAAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTAAGGCAGGTGCAAGGTTaGGGCATGGGCATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: AWKASRAGQESQMSLYCLRQVQG*GMGIFQ
Trigger: CTGGAAGATGCCCATGCCTCAACCTTGCACCTGCCT...TAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTTCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp GGTGCAATTGCACACACAGTCCATGGACCATGGGGATGGGTATGTCTTCCCTTCACAGCTCCCACACCTTaGTGGCAGAGAAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GAIAHTVHGPWGWVCLPFTAPTP*WQRSGH
Trigger: GTGGCCACTTCTCTGCCATCAAGGTGTGGGAGCTGT...GAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTGCAATTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGACGGCCATGTGGCCCTaGCCCACATCTAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWTAMWP*PTSRRA
Trigger: AGCCCTCCTAGATGTGGGTCAGGGCCACATGGCCGT...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCAGGACACATGGAGGCTaGCAGGGGCAGCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSRTHGG*QGQPGW
Trigger: CCAGCCTGGCTGCCCCTGTCAGCCTCCATGTGTCCT...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGCATAGAGGGCGGATaGGAGGGCAGCAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVAGIEGG*EGSRVL
Trigger: GAGGACCCTGCTGCCCTCTCATCCGCCCTCTATGCC...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp CTTCCCTTCACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGGATTCCAGAACCACGTaGAGGAAGAGTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LPFTLPSPCRVHGHCSYLDSRTT*RKSCPW
Trigger: CCACGGGCAACTCTTCCTTCACGTGGTTCTGGAATC...CAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGTGAAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCGATTCCAGAACCACGTaGAGGAAGAGTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCDSRTT*RKSCPW
Trigger: CCACGGGCAACTCTTCCTTCACGTGGTTCTGGAATC...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp GGATACAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTCGGAGCAATGCAAGATaGCCACAAGTCCGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GYRGKPHRETWATWLSPSRSNAR*PQVRPV
Trigger: CACAGGCCGGACTTGTGGGCATCTTGCATTGCTCCG...AGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCCTGACCACGGAGCAATaGAAGATGCCCACAAGTCCG +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCLTTEQ*KMPTSP
Trigger: CGGACTTGTGGGCATCTTGCATTGCTCCGTGGTCAG...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGCTCAGGGTCACCGCCTaGCCTTCCACAACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRLRVTA*PSTTSA
Trigger: AGCAGAGGTTGTGGAAGGGCAGGCGGTGACCCTGAG...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGCTCAGGCCACTCCTaGAGCTCAGGGTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSGSGHS*SSGSPP
Trigger: AGGCGGTGACCCTGAGCTGCAGGAGTGGCCTGAGCC...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCCCTTGGCCTGGATCCTaGCATGGGAGGGACGCTGGG +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSPWPGS*HGRDAG
Trigger: CCCAGCGTCCCTCCCATGGCAGGATCCAGGCCAAGG...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGACCTGCTGCCCCTCTTaGACAGTGGCATTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRTCCPS*TVALGH
Trigger: GTGGCCCAATGCCACTGTGCAAGAGGGGCAGCAGGT...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp GGTGCAATTGCACACACAGTCCATGGACCATGGGGATGGGTATGTCTTCCCTTCGTGAGTCCTGGTGGGTaGTCCACACCAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GAIAHTVHGPWGWVCLPFVSPGG*STPSRS
Trigger: TGACCTGCTTGGTGTGGAGCACCCACCAGGACTCAC...GAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTGCAATTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp CAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGAGGTAGGCAGGATCGGGACGTGTTGGCCTTaGCCAATGGGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QVRKARCLCTAYTEVGRIGTCWP*PMGCGQ
Trigger: CTGCCCACAGCCCATTGGGCAAGGCCAACACGTCCC...GATCCTGCCTACCTCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp CTTCCCTTCACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCCCTGCACATTCTTaGGACTGGAGACACCCCATG +
Preference number: 4 (lower is better)
Translates to: LPFTLPSPCRVHGHCSYLSPAHS*DWRHPM
Trigger: CATGGGGTGTCTCCAGTCCCAAGAATGTGCAGGGCT...CAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGTGAAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp CCGCCATCGTCAATCTTTATGTATTATACTGAACCCCACTCCCACCCCATAAAGGAGTGGGTGGGGTCCTaGCCTCGCCACTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPSSIFMYYTEPHSHPIKEWVGS*PRHCRL
Trigger: CAGCCTGCAGTGGCGAGGCCAGGACCCCACCCACTC...CTTTATGGGGTGGGAGTGGGGTTCAGTATAATACATAAAGATTGACGATGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CCA 90 bp CAGGAGGGAAAACTAAGACCCTGTCATGCTGTGGTCACTGTATTGAGTCTCTGTAGCAGGGTCCGACCGTaGTCCTGCCAGGATAGGGCC +
Preference number: 4 (lower is better)
Translates to: QEGKLRPCHAVVTVLSLCSRVRP*SCQDRA
Trigger: GGCCCTATCCTGGCAGGACCACGGTCGGACCCTGCT...ACAGAGACTCAATACAGTGACCACAGCATGACAGGGTCTTAGTTTTCCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCAGCAGGGTCCGACCGTaGTCCTGCCAGGATAGGGCC +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSSRVRP*SCQDRA
Trigger: GGCCCTATCCTGGCAGGACCACGGTCGGACCCTGCT...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGCGCCCAATGAGAACTaGCAGAGCAGGGTCCGACCG +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWAPNEN*QSRVRP
Trigger: CGGTCGGACCCTGCTCTGCCAGTTCTCATTGGGCGC...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGCGAGTGTCAGGAGCTaGGCTCAGGCCACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWASVRS*AQATPA
Trigger: TGCAGGAGTGGCCTGAGCCCAGCTCCTGACACTCGC...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp ACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCTTCATAAGTTGGCTGTGGCCTTaGCCTGGATCCTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: TLPSPCRVHGHCSYLSFISWLWP*PGSCHG
Trigger: CCCATGGCAGGATCCAGGCCAAGGCCACAGCCAACT...TATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCCTCAGGACCACAGCCTaGCCCTCCCGGAGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSLRTTA*PSRSSG
Trigger: ACCTGAGCTCCGGGAGGGCCAGGCTGTGGTCCTGAG...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGCCTCAGAGACTCCTGTaGGCACCTGGCAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRPQRLL*APGSSG
Trigger: TCCTGAGCTGCCAGGTGCCCACAGGAGTCTCTGAGG...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp GGATACAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTGCCCCTCTTGCACAGTaGCATTGGGCCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: GYRGKPHRETWATWLSPSAPLAQ*HWATQS
Trigger: TGACTGTGTGGCCCAATGCCACTGTGCAAGAGGGGC...AGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp CACACAGTCCATGGACCATGGGGATGGGTATGTCTTCCCTTCACTCTTCCTTCTCAGAGCTGTGCCCTCTaGCACATCCAAGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HTVHGPWGWVCLPFTLPSQSCAL*HIQAWL
Trigger: GAGCCAGGCTTGGATGTGCCAGAGGGCACAGCTCTG...AGAAGGAAGAGTGAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GGATACAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTGACACGGAGCATAACTaGAGCAGAGGTAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GYRGKPHRETWATWLSPSDTEHN*SRGSGP
Trigger: GGGGCCACTACCTCTGCTCCAGTTATGCTCCGTGTC...AGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCAGTACCAGATGGCTGTaGTGCCATTGGACACTGGGA +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCSTRWL*CHWTLG
Trigger: TCCCAGTGTCCAATGGCATCACAGCCATCTGGTACT...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp CCATTTTTCTTAGGATCAAGAGGCTTGGAAGGCAAGTCGGGCAGGTCAGGAAAGCCCACTGCACGGCACTaGCAGCAGGATAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PFFLGSRGLEGKSGRSGKPTARH*QQDSCC
Trigger: ACAGCAGCTATCCTGCTGTCAGTGCCGTGCAGTGGG...CTTTCCTGACCTGCCCGACTTGCCTTCCAAGCCTCTTGATCCTAAGAAAAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGCCCACTGCACGGCACTaGCAGCAGGATAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWPTARH*QQDSCC
Trigger: ACAGCAGCTATCCTGCTGTCAGTGCCGTGCAGTGGG...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGCCTCACAGTCTCCAGTaGTCCCTGGGTCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWPHSLQ*SLGPQH
Trigger: GTGCTGTGGACCCAGGGATCACTGGAGACTGTGAGG...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp GCTTGGAAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTAGACAGAGGCTTCAGTTaGGGAGGCTACAAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: AWKASRAGQESQMSLYCLDRGFS*GGYKLV
Trigger: GACCAGCTTGTAGCCTCCTCAACTGAAGCCTCTGTC...TAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTTCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGCACTGCAGGCTGACTTaGTTCTCCTGCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRHCRLT*FSCRHR
Trigger: CCTGTGCCTGCAGGAGAAGCAAGTCAGCCTGCAGTG...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp CCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCTTCATAATCAAAGGCAACGGGAGCACAGTCACATaGAGCCGGGGATTACTGCCT +
Preference number: 4 (lower is better)
Translates to: PCRVHGHCSYLSFIIKGNGSTVT*SRGLLP
Trigger: AGGCAGTAATCCCCGGCTGCATGTGACTGTGCTCCC...GTTGCCTTTGATTATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp ACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCTTCATAGTCAGGTTCACCTGCTaGCCCTCTTGCACAGTGGCA +
Preference number: 4 (lower is better)
Translates to: TLPSPCRVHGHCSYLSFIVRFTC*PSCTVA
Trigger: TGCCACTGTGCAAGAGGGGCAGCAGGTGAACCTGAC...TATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGGTGAGTCCTGGTGGGTaGTCCACACCAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRVSPGG*STPSRS
Trigger: TGACCTGCTTGGTGTGGAGCACCCACCAGGACTCAC...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGACGTGTTGGCCTTaGCCAATGGGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVAGTCWP*PMGCGQ
Trigger: CTGCCCACAGCCCATTGGGCAAGGCCAACACGTCCC...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCTACGGACCAGTGAGATaGAGAGACAGACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCYGPVR*RDRHRA
Trigger: TGCCCTGTGTCTGTCTCTGCATCTCACTGGTCCGTA...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp GCCTCATCCCATTCCCAGGTGCCCTCCAGATATTATACCACCTGTGAGTGGATATTGGGGTCCCCTGAGTaGATTACCACCTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: ASSHSQVPSRYYTTCEWILGSPE*ITTCRL
Trigger: CAAGCGGCAGGTGGTAATCCACTCAGGGGACCCCAA...TATCCACTCACAGGTGGTATAATATCTGGAGGGCACCTGGGAATGGGATGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGTTGGGGTCCCCTGAGTaGATTACCACCTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRLGSPE*ITTCRL
Trigger: CAAGCGGCAGGTGGTAATCCACTCAGGGGACCCCAA...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp CAACCGCCATCGTCAATCTTTATGTATTATACTGAACCCCACTCCCACCCCATAAGCAGGGTCCGACCGTaGTCCTGCCAGGATAGGGCC +
Preference number: 4 (lower is better)
Translates to: QPPSSIFMYYTEPHSHPISRVRP*SCQDRA
Trigger: GGCCCTATCCTGGCAGGACCACGGTCGGACCCTGCT...TATGGGGTGGGAGTGGGGTTCAGTATAATACATAAAGATTGACGATGGCGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CCA 90 bp ACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCTTCATACAGCAGCATCAGTTCTaGCCACAGGCTGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TLPSPCRVHGHCSYLSFIQQHQF*PQAAAS
Trigger: TGAGGCTGCAGCCTGTGGCCAGAACTGATGCTGCTG...TATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp AAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGACCTCAGAGACTCCTGTaGGCACCTGGCAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: KASRAGQESQMSLYCLYRPQRLL*APGSSG
Trigger: TCCTGAGCTGCCAGGTGCCCACAGGAGTCTCTGAGG...TCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp CCATTTTTCTTAGGATCAAGAGGCTTGGAAGGCAAGTCGGGCAGGTCAGGAAAGGTTGGCCTTGCCCAATaGGCTGTGGGCAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PFFLGSRGLEGKSGRSGKVGLAQ*AVGRAA
Trigger: AGCTGCTCTGCCCACAGCCCATTGGGCAAGGCCAAC...CTTTCCTGACCTGCCCGACTTGCCTTCCAAGCCTCTTGATCCTAAGAAAAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGTTGGCCTTGCCCAATaGGCTGTGGGCAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWVGLAQ*AVGRAA
Trigger: AGCTGCTCTGCCCACAGCCCATTGGGCAAGGCCAAC...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp CCAGGCCAGGAGGGAAAACTAAGACCCTGTCATGCTGTGGTCACTGTATTGAGTGTAGTCACCAGGAACTaGAGTGAGGAAGCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: PGQEGKLRPCHAVVTVLSVVTRN*SEEAGP
Trigger: GGGACCGGCTTCCTCACTCCAGTTCCTGGTGACTAC...ACTCAATACAGTGACCACAGCATGACAGGGTCTTAGTTTTCCCTCCTGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GCTTGGAAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATGGAACAGCTGCAGTTaGTGCAGAGCTCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: AWKASRAGQESQMSLYCLWNSCS*CRALVP
Trigger: TGGGACCAGAGCTCTGCACCAACTGCAGCTGTTCCA...TAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTTCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp ACTGATATCCTGGCTGGTACAGACCGTCTTAGAAAGTCTGTGAGAAACTGGATGCAGCTTGGGGTCCCCTaGGTGGATTACCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: TDILAGTDRLRKSVRNWMQLGVP*VDYHLP
Trigger: CGGCAGGTGGTAATCCACTCAGGGGACCCCAAGCTG...CATCCAGTTTCTCACAGACTTTCTAAGACGGTCTGTACCAGCCAGGATATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp TTGCCTCATCCCATTCCCAGGTGCCCTCCAGATATTATACCACCTGTGAGTGGAAAGGATGTTCCTCCCTaGGGAGCTGAGGAGGATCTC +
Preference number: 4 (lower is better)
Translates to: LPHPIPRCPPDIIPPVSGKDVPP*GAEEDL
Trigger: GAGATCCTCCTCAGCTCCTCAGGGAGGAACATCCTT...TCCACTCACAGGTGGTATAATATCTGGAGGGCACCTGGGAATGGGATGAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR TCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGAGGCAGGTGCAAGGTTaGGGCATGGGCATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWRQVQG*GMGIFQ
Trigger: CTGGAAGATGCCCATGCCTCAACCTTGCACCTGCCT...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCCAGTATCAGCCCTGGTaGCTGCAGGCAGGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSQYQPW*LQAGAR
Trigger: CCTTGCACCTGCCTGCAGTCACCAGGGCTGATACTG...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp CAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGAGGTAGGCAGGATCTGTCCACAGTGCAGATaGACACGGCCATGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: QVRKARCLCTAYTEVGRICPQCR*TRPCGP
Trigger: AGGGCCACATGGCCGTGTTCATCTGCACTGTGGACA...GATCCTGCCTACCTCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGCCATGTGTAGCTGAGTaGGTCCTGGTGGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWPCVAE*VLVGAP
Trigger: TGGAGCACCCACCAGGACTCACTCAGCTACACATGG...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp CACACAGTCCATGGACCATGGGGATGGGTATGTCTTCCCTTCACTCTTCCTTCTTGTACCATGTGTAGCTaGGTGAGTCCTGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: HTVHGPWGWVCLPFTLPSCTMCS*VSPGGC
Trigger: GCACCCACCAGGACTCACTCAGCTACACATGGTACA...AGAAGGAAGAGTGAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGTGTACCATGTGTAGCTaGGTGAGTCCTGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRCTMCS*VSPGGC
Trigger: GCACCCACCAGGACTCACTCAGCTACACATGGTACA...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGCTGGTCACCATGGCTaGGAGTTAGCTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVAAGHHG*ELAGQV
Trigger: CACCTGCCCAGCTAACTCTCAGCCATGGTGACCAGC...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp GATATCCTGGCTGGTACAGACCGTCTTAGAAAGTCTGTGAGAAACTGGATGTTGCACCAGGAACTGGAGTaGGGAAGCCGGTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DILAGTDRLRKSVRNWMLHQELE*GSRSLL
Trigger: CAGGAGGGACCGGCTTCCTCACTCCAGTTCCTGGTG...CAACATCCAGTTTCTCACAGACTTTCTAAGACGGTCTGTACCAGCCAGGATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp CCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCTTCATAATCAAAGGCAACAAAGTAGGCAGAGGCTaGGGCAGAGCCCAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: PCRVHGHCSYLSFIIKGNKVGRG*GRAQSV
Trigger: AACACTCTGGGCTCTGCCTCAGCCTCTGCCTACTTT...GTTGCCTTTGATTATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp GGATACAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTTTACCACCTGCCGCTTaGCCGAGTAGTCATAGTACC +
Preference number: 4 (lower is better)
Translates to: GYRGKPHRETWATWLSPSLPPAA*PSSHST
Trigger: GGTACTATGACTACTCGGGCAAGCGGCAGGTGGTAA...AGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp AAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGACACTGCAGGCTGACTTaGTTCTCCTGCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: KASRAGQESQMSLYCLYRHCRLT*FSCRHR
Trigger: CCTGTGCCTGCAGGAGAAGCAAGTCAGCCTGCAGTG...TCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGCAGGAAGCAGGAGGCTaGTGCTGGATCCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRQEAGG*CWILPE
Trigger: TTCTGGAAGGATCCAGCAGCAGCCTCCTGCTTCCTG...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCTTCTGGATCTCCACGTaGAGTGAGTTGGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCFWIST*SELEVL
Trigger: CAGAACCTCCAACTCACTGCACGTGGAGATCCAGAA...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp CAGGAGGGAAAACTAAGACCCTGTCATGCTGTGGTCACTGTATTGAGTCTCTGTTCTCGGACCTCTAGCTaGAGGGAGTTGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QEGKLRPCHAVVTVLSLCSRTSS*RELAVA
Trigger: GGCCACAGCCAACTCCCTGCAGCTAGAGGTCCGAGA...ACAGAGACTCAATACAGTGACCACAGCATGACAGGGTCTTAGTTTTCCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp TCCAGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTTCTCGGACCTCTAGCTaGAGGGAGTTGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRRGSQILLWMVVSHHVVSRTSS*RELAVA
Trigger: GGCCACAGCCAACTCCCTGCAGCTAGAGGTCCGAGA...AACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGTCAGGTTCACCTGCTaGCCCTCTTGCACAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWVRFTC*PSCTVA
Trigger: TGCCACTGTGCAAGAGGGGCAGCAGGTGAACCTGAC...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp CAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGAGGTAGGCAGGATCCAGGTCAGGTTCACCTaGTGCCCCTCTTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: QVRKARCLCTAYTEVGRIQVRFT*CPSCTV
Trigger: CACTGTGCAAGAGGGGCAGCAGGTGAACCTGACCTG...GATCCTGCCTACCTCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp CAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTCAGAGTTAAGTTCAGAGCTGTaGCCTCTGGCACATCCAAGC +
Preference number: 4 (lower is better)
Translates to: QRKTTQRDVGNMAESVSELSSEL*PLAHPS
Trigger: GCTTGGATGTGCCAGAGGGCACAGCTCTGAACTTAA...CTCTGAGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGGATGCCATTGGACACTaGGACATCGGCAGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRDAIGH*DIGRVA
Trigger: AGCTACCCTGCCGATGTCCCAGTGTCCAATGGCATC...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp CACACACAGTCCATGGACCATGGGGATGGGTATGTCTTCCCTTCACTCTTCCTTGCTTGTCCACCAGCTTaGGGTCCCCTGAGTGGATTA +
Preference number: 4 (lower is better)
Translates to: HTQSMDHGDGYVFPSLFLACPPA*GPLSGL
Trigger: TAATCCACTCAGGGGACCCCAAGCTGGTGGACAAGC...AAGGAAGAGTGAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCAGGTTGCACACCTTGTaGTCCATGTTCCCCATCAGT +
Preference number: 4 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCRLHTL*SMFPIS
Trigger: ACTGATGGGGAACATGGACCACAAGGTGTGCAACCT...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp ACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCTTCATAGCAGGTGAGTGTGACTaGATCCCCGGGAAGGATGTT +
Preference number: 4 (lower is better)
Translates to: TLPSPCRVHGHCSYLSFIAGECD*IPGKDV
Trigger: AACATCCTTCCCGGGGATCCAGTCACACTCACCTGC...TATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp TCACCTGCTTTGCCTCATCCCATTCCCAGGTGCCCTCCAGATATTATACCACCTGCAGGTGAGTGTGACTaGATCCCCGGGAAGGATGTT +
Preference number: 4 (lower is better)
Translates to: SPALPHPIPRCPPDIIPPAGECD*IPGKDV
Trigger: AACATCCTTCCCGGGGATCCAGTCACACTCACCTGC...AGGTGGTATAATATCTGGAGGGCACCTGGGAATGGGATGAGGCAAAGCAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CCA 90 bp CAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGAGGTAGGCAGGATCGAGCGCTCACTGCCCTaGGCATTCTGCACTTCACAG +
Preference number: 4 (lower is better)
Translates to: QVRKARCLCTAYTEVGRIERSLP*AFCTSQ
Trigger: CTGTGAAGTGCAGAATGCCCAGGGCAGTGAGCGCTC...GATCCTGCCTACCTCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGGAGAAGCCGTAGCTaGGCTGGGGGATCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSWRSRS*AGGSLS
Trigger: AGACAGCGATCCCCCAGCCCAGCTACGGCTTCTCCA...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGCAGCAGCATCAGTTCTaGCCACAGGCTGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWQQHQF*PQAAAS
Trigger: TGAGGCTGCAGCCTGTGGCCAGAACTGATGCTGCTG...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGTTGGTGGCCAGGAGATaGTCCCCACGGAACAGAGAC +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWLVARR*SPRNRD
Trigger: GTCTCTGTTCCGTGGGGACCATCTCCTGGCCACCAA...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp TCCAGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGGTTCCAAGTTaGTGGCCAGGAGATGGTCCC +
Preference number: 4 (lower is better)
Translates to: SRRGSQILLWMVVSHHVVAGVPS*WPGDGP
Trigger: GGGACCATCTCCTGGCCACCAACTTGGAACCCCAGC...AACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTAGTTGGCTGTGGCCTTaGCCTGGATCCTGCCATGGG +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVASWLWP*PGSCHG
Trigger: CCCATGGCAGGATCCAGGCCAAGGCCACAGCCAACT...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTCTAGCTGCAGGGAGTTaGCTGTGGCCTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVALAAGS*LWPWPG
Trigger: TCCAGGCCAAGGCCACAGCCAACTCCCTGCAGCTAG...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGGGCCCAGTGTGTTGCTaGCTTCGCATGTATAGGTCC +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRGPVCC*LRMYRS
Trigger: GGACCTATACATGCGAAGCCAGCAACACACTGGGCC...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGTAGTCACCAGGAACTaGAGTGAGGAAGCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWVVTRN*SEEAGP
Trigger: GGGACCGGCTTCCTCACTCCAGTTCCTGGTGACTAC...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp CCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCTTCATAATCAAAGGCAACAGAGAATTTGCAGGCTaGCAGGTCTGGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PCRVHGHCSYLSFIIKGNREFAG*QVWSSV
Trigger: CACGGAGCTCCAGACCTGCCAGCCTGCAAATTCTCT...GTTGCCTTTGATTATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCCAGAGCTGTGCCCTCTaGCACATCCAAGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSQSCAL*HIQAWL
Trigger: GAGCCAGGCTTGGATGTGCCAGAGGGCACAGCTCTG...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
3UTR CAA 72 bp CAGTTTCTAGCGGATGAGAAGTTGGGTGGGGTGCAATaGCACACACAGTCCATGGACCATGGGGATGGGTAT +
Preference number: 4 (lower is better)
Translates to: QFLADEKLGGVQ*HTQSMDHGDGY
Trigger: ATACCCATCCCCATGGTCCATGGACTGTGTGTGCAATTGCACCCCACCCAACTTCTCATCCGCTAGAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGAAGGATGTTCCTCCCTaGGGAGCTGAGGAGGATCTC +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWKDVPP*GAEEDL
Trigger: GAGATCCTCCTCAGCTCCTCAGGGAGGAACATCCTT...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp GATATCCTGGCTGGTACAGACCGTCTTAGAAAGTCTGTGAGAAACTGGATGTTGCAGTATCAGCCCTGGTaGCTGCAGGCAGGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: DILAGTDRLRKSVRNWMLQYQPW*LQAGAR
Trigger: CCTTGCACCTGCCTGCAGTCACCAGGGCTGATACTG...CAACATCCAGTTTCTCACAGACTTTCTAAGACGGTCTGTACCAGCCAGGATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTACAGCTCCCACACCTTaGTGGCAGAGAAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVATAPTP*WQRSGH
Trigger: GTGGCCACTTCTCTGCCATCAAGGTGTGGGAGCTGT...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGAGTTGGAGGTTCTGCTaGCTTTTGTGCGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRSWRFC*LLCAGN
Trigger: GTTCCCAGCGCACAAAAGTCAGCAGAACCTCCAACT...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp AGGCCAGGAGGGAAAACTAAGACCCTGTCATGCTGTGGTCACTGTATTGAGTCTGATCTCCACGTGCAGTaGGTTGGAGGTTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RPGGKTKTLSCCGHCIESDLHVQ*VGGSAD
Trigger: GTCAGCAGAACCTCCAACTCACTGCACGTGGAGATC...AGACTCAATACAGTGACCACAGCATGACAGGGTCTTAGTTTTCCCTCCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGTCCACAGTGCAGATaGACACGGCCATGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSCPQCR*TRPCGP
Trigger: AGGGCCACATGGCCGTGTTCATCTGCACTGTGGACA...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp GACAACCGCCATCGTCAATCTTTATGTATTATACTGAACCCCACTCCCACCCCACACTGCAGGCTGACTTaGTTCTCCTGCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: DNRHRQSLCIILNPTPTPHCRLT*FSCRHR
Trigger: CCTGTGCCTGCAGGAGAAGCAAGTCAGCCTGCAGTG...TGGGGTGGGAGTGGGGTTCAGTATAATACATAAAGATTGACGATGGCGGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR GCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGTGACTGCAGGCAGGTaGAAGGTTGAGGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVAVTAGR*KVEAWA
Trigger: TGCCCATGCCTCAACCTTGCACCTGCCTGCAGTCAC...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTCGGAGCAATGCAAGATaGCCACAAGTCCGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVARSNAR*PQVRPV
Trigger: CACAGGCCGGACTTGTGGGCATCTTGCATTGCTCCG...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp CCATTTTTCTTAGGATCAAGAGGCTTGGAAGGCAAGTCGGGCAGGTCAGGAAAGCAGGAAGCAGGAGGCTaGTGCTGGATCCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PFFLGSRGLEGKSGRSGKQEAGG*CWILPE
Trigger: TTCTGGAAGGATCCAGCAGCAGCCTCCTGCTTCCTG...CTTTCCTGACCTGCCCGACTTGCCTTCCAAGCCTCTTGATCCTAAGAAAAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp CAGGAGGGAAAACTAAGACCCTGTCATGCTGTGGTCACTGTATTGAGTCTCTGTGTTCTGGCCACAGGCTaGAGCCTCACAGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QEGKLRPCHAVVTVLSLCVLATG*SLTVSS
Trigger: ACTGGAGACTGTGAGGCTGCAGCCTGTGGCCAGAAC...ACAGAGACTCAATACAGTGACCACAGCATGACAGGGTCTTAGTTTTCCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGTTCTGGCCACAGGCTaGAGCCTCACAGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVAVLATG*SLTVSS
Trigger: ACTGGAGACTGTGAGGCTGCAGCCTGTGGCCAGAAC...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGAGATGCCATTGGACACTaGGACATCGGCAGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: KASRAGQESQMSLYCLYRDAIGH*DIGRVA
Trigger: AGCTACCCTGCCGATGTCCCAGTGTCCAATGGCATC...TCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp CATCCCATTCCCAGGTGCCCTCCAGATATTATACCACCTGTGAGTGGATACTGTGCTTGTCCACCAGCTTaGGGTCCCCTGAGTGGATTA +
Preference number: 4 (lower is better)
Translates to: HPIPRCPPDIIPPVSGYCACPPA*GPLSGL
Trigger: TAATCCACTCAGGGGACCCCAAGCTGGTGGACAAGC...ACAGTATCCACTCACAGGTGGTATAATATCTGGAGGGCACCTGGGAATGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGCTTGTCCACCAGCTTaGGGTCCCCTGAGTGGATTA +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWACPPA*GPLSGL
Trigger: TAATCCACTCAGGGGACCCCAAGCTGGTGGACAAGC...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGAGCGCTCACTGCCCTaGGCATTCTGCACTTCACAG +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVAERSLP*AFCTSQ
Trigger: CTGTGAAGTGCAGAATGCCCAGGGCAGTGAGCGCTC...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp GGATACAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTGTCTGGAGTAAGGGGTaGATATCTGACCACCACACT +
Preference number: 4 (lower is better)
Translates to: GYRGKPHRETWATWLSPSVWSKG*ISDHHT
Trigger: AGTGTGGTGGTCAGATATCCACCCCTTACTCCAGAC...AGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp CAGGAGGGAAAACTAAGACCCTGTCATGCTGTGGTCACTGTATTGAGTCTCTGTTTGGTGGCCAGGAGATaGTCCCCACGGAACAGAGAC +
Preference number: 4 (lower is better)
Translates to: QEGKLRPCHAVVTVLSLCLVARR*SPRNRD
Trigger: GTCTCTGTTCCGTGGGGACCATCTCCTGGCCACCAA...ACAGAGACTCAATACAGTGACCACAGCATGACAGGGTCTTAGTTTTCCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCCTAGGCGCAGGGTGTTaGGGACAGAGGCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSLGAGC*GQRLQL
Trigger: CAACTGAAGCCTCTGTCCCCAACACCCTGCGCCTAG...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGTTCCAGGGACGTGTTaGCCTTGCCCAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVAVPGTC*PCPMGC
Trigger: ACAGCCCATTGGGCAAGGCCAACACGTCCCTGGAAC...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGACCATCTCAGCAGGTaGCTCACTGTCCACGGTGCA +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVADHLSR*LTVHGA
Trigger: TGCACCGTGGACAGTGAGCCACCTGCTGAGATGGTC...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGACTCGGATGTGGGGCTTaGTGGGAGCATCGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: KASRAGQESQMSLYCLYRLGCGA*WEHREV
Trigger: AACTTCACGATGCTCCCACCAAGCCCCACATCCGAG...TCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp AAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGAAGTACCAGATGGCTGTaGTGCCATTGGACACTGGGA +
Preference number: 4 (lower is better)
Translates to: KASRAGQESQMSLYCLYRSTRWL*CHWTLG
Trigger: TCCCAGTGTCCAATGGCATCACAGCCATCTGGTACT...TCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGATCTCCACGTGCAGTaGGTTGGAGGTTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVADLHVQ*VGGSAD
Trigger: GTCAGCAGAACCTCCAACTCACTGCACGTGGAGATC...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp TCCAGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGACAGAGGCTTCAGTTaGGGAGGCTACAAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SRRGSQILLWMVVSHHVVDRGFS*GGYKLV
Trigger: GACCAGCTTGTAGCCTCCTCAACTGAAGCCTCTGTC...AACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGTTACCACCTGCCGCTTaGCCGAGTAGTCATAGTACC +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWLPPAA*PSSHST
Trigger: GGTACTATGACTACTCGGGCAAGCGGCAGGTGGTAA...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp CACACACAGTCCATGGACCATGGGGATGGGTATGTCTTCCCTTCACTCTTCCTTAGCGGAAGTTGTAGGTaGCAGAGTCTTCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: HTQSMDHGDGYVFPSLFLSGSCR*QSLQAS
Trigger: TGAAGCCTGAAGACTCTGGCACCTACAACTTCCGCT...AAGGAAGAGTGAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp TGGAGTCACCTGCTTTGCCTCATCCCATTCCCAGGTGCCCTCCAGATATTATACAGCGGAAGTTGTAGGTaGCAGAGTCTTCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: WSHLLCLIPFPGALQILYSGSCR*QSLQAS
Trigger: TGAAGCCTGAAGACTCTGGCACCTACAACTTCCGCT...GTATAATATCTGGAGGGCACCTGGGAATGGGATGAGGCAAAGCAGGTGACTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR GCA 90 bp GGAGGGAAAACTAAGACCCTGTCATGCTGTGGTCACTGTATTGAGTCTCTGTTAGACTGGAGCGCTCACTaGCCTGGGCATTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: GGKTKTLSCCGHCIESLLDWSAH*PGHSAL
Trigger: AAGTGCAGAATGCCCAGGGCAGTGAGCGCTCCAGTC...TAACAGAGACTCAATACAGTGACCACAGCATGACAGGGTCTTAGTTTTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp ACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCTTCATATTCTGGATCTCCACGTaGAGTGAGTTGGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TLPSPCRVHGHCSYLSFIFWIST*SELEVL
Trigger: CAGAACCTCCAACTCACTGCACGTGGAGATCCAGAA...TATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp CTTCCCTTCACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGTGCAAACATAGGTGTTaGCATCACCCAGAGTCACAT +
Preference number: 4 (lower is better)
Translates to: LPFTLPSPCRVHGHCSYLCKHRC*HHPESH
Trigger: ATGTGACTCTGGGTGATGGCAACACCTATGTTTGCA...CAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGTGAAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGTTAAGTTCAGAGCTGTaGCCTCTGGCACATCCAAGC +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRLSSEL*PLAHPS
Trigger: GCTTGGATGTGCCAGAGGGCACAGCTCTGAACTTAA...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGATGGAGACACCCCATGTaGTCTGGCCTAGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KASRAGQESQMSLYCLYRWRHPM*SGLVRR
Trigger: TCTTCTCACTAGGCCAGACCACATGGGGTGTCTCCA...TCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp TTGCCTCATCCCATTCCCAGGTGCCCTCCAGATATTATACCACCTGTGAGTGGAAGGTTGCACACCTTGTaGTCCATGTTCCCCATCAGT +
Preference number: 4 (lower is better)
Translates to: LPHPIPRCPPDIIPPVSGRLHTL*SMFPIS
Trigger: ACTGATGGGGAACATGGACCACAAGGTGTGCAACCT...TCCACTCACAGGTGGTATAATATCTGGAGGGCACCTGGGAATGGGATGAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CCA 90 bp TTCATAATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCGAGTGGGTGGGGTCCTaGCCTCGCCACTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FIIKGNTWGMEKIKQEGFEWVGS*PRHCRL
Trigger: CAGCCTGCAGTGGCGAGGCCAGGACCCCACCCACTC...GAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGCAGGTGAGTGTGACTaGATCCCCGGGAAGGATGTT +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVAAGECD*IPGKDV
Trigger: AACATCCTTCCCGGGGATCCAGTCACACTCACCTGC...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp CCAGGCCAGGAGGGAAAACTAAGACCCTGTCATGCTGTGGTCACTGTATTGAGTCAGGCTCCTCTGACCTaGAAGAAGAGTGAACTGTTG +
Preference number: 4 (lower is better)
Translates to: PGQEGKLRPCHAVVTVLSQAPLT*KKSELL
Trigger: CAACAGTTCACTCTTCTTCCAGGTCAGAGGAGCCTG...ACTCAATACAGTGACCACAGCATGACAGGGTCTTAGTTTTCCCTCCTGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGCAGGCTCCTCTGACCTaGAAGAAGAGTGAACTGTTG +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRQAPLT*KKSELL
Trigger: CAACAGTTCACTCTTCTTCCAGGTCAGAGGAGCCTG...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGTCATCCTCCAGCTCTaGAAAGTGGATCTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSVILQL*KVDLQA
Trigger: CGCCTGCAGATCCACTTTCCAGAGCTGGAGGATGAC...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp TCCAGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTAGAGAATTTGCAGGCTaGCAGGTCTGGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SRRGSQILLWMVVSHHVVREFAG*QVWSSV
Trigger: CACGGAGCTCCAGACCTGCCAGCCTGCAAATTCTCT...AACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp CCTCATCCCATTCCCAGGTGCCCTCCAGATATTATACCACCTGTGAGTGGATACGACTCACTAAAAACATaGAGGCTGAGCGGGGATGAC +
Preference number: 4 (lower is better)
Translates to: PHPIPRCPPDIIPPVSGYDSLKT*RLSGDD
Trigger: GTCATCCCCGCTCAGCCTCCATGTTTTTAGTGAGTC...GTATCCACTCACAGGTGGTATAATATCTGGAGGGCACCTGGGAATGGGATGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR TCA 90 bp GACAACCGCCATCGTCAATCTTTATGTATTATACTGAACCCCACTCCCACCCCAAGTACCAGATGGCTGTaGTGCCATTGGACACTGGGA +
Preference number: 4 (lower is better)
Translates to: DNRHRQSLCIILNPTPTPSTRWL*CHWTLG
Trigger: TCCCAGTGTCCAATGGCATCACAGCCATCTGGTACT...TGGGGTGGGAGTGGGGTTCAGTATAATACATAAAGATTGACGATGGCGGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR TCA 90 bp AGAGTTCTAGACAACCGCCATCGTCAATCTTTATGTATTATACTGAACCCCACTCAGCTTGGGGTCCCCTaGGTGGATTACCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: RVLDNRHRQSLCIILNPTQLGVP*VDYHLP
Trigger: CGGCAGGTGGTAATCCACTCAGGGGACCCCAAGCTG...AGTGGGGTTCAGTATAATACATAAAGATTGACGATGGCGGTTGTCTAGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR TCA 90 bp CACACACAGTCCATGGACCATGGGGATGGGTATGTCTTCCCTTCACTCTTCCTTAGCGGTTGCTATCACTaGTCTCAAAGCGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: HTQSMDHGDGYVFPSLFLSGCYH*SQSGSC
Trigger: ACAACTTCCGCTTTGAGATCAGTGATAGCAACCGCT...AAGGAAGAGTGAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGAGCGGTTGCTATCACTaGTCTCAAAGCGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRSGCYH*SQSGSC
Trigger: ACAACTTCCGCTTTGAGATCAGTGATAGCAACCGCT...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp CACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTGATACCACAACAACATCGTGAGGCCTCCGTGTaGCAGCACCACAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: HLGNGENQARRILIPQQHREASV*QHHSSQ
Trigger: CTGGCTACTGTGGTGCTGTCACACGGAGGCCTCACG...ATGTTGTTGTGGTATCAGAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp AATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTGATAACAGGAGCCGAGAGCTaGGCCCCATCCTCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: NQRQHLGNGENQARRILITGAES*APSSVR
Trigger: CCTCACCGAGGATGGGGCTCAGCTCTCGGCTCCTGT...TATCAGAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCCATGAGCCTGGTCCTTaGGTCTCGAAAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSHEPGP*VSKGRQ
Trigger: CTGTCTTCCTTTCGAGACTCAAGGACCAGGCTCATG...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCCCTGATACGGACCAGTaGGATGCAGAGACAGACACA +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSPDTDQ*DAETDT
Trigger: TGTGTCTGTCTCTGCATCTCACTGGTCCGTATCAGG...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp GACAACCGCCATCGTCAATCTTTATGTATTATACTGAACCCCACTCCCACCCCATTACCACCTGCCGCTTaGCCGAGTAGTCATAGTACC +
Preference number: 4 (lower is better)
Translates to: DNRHRQSLCIILNPTPTPLPPAA*PSSHST
Trigger: GGTACTATGACTACTCGGGCAAGCGGCAGGTGGTAA...TGGGGTGGGAGTGGGGTTCAGTATAATACATAAAGATTGACGATGGCGGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR GCA 90 bp TTCATAATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCCCTTGGCCTGGATCCTaGCATGGGAGGGACGCTGGG +
Preference number: 4 (lower is better)
Translates to: FIIKGNTWGMEKIKQEGFPWPGS*HGRDAG
Trigger: CCCAGCGTCCCTCCCATGGCAGGATCCAGGCCAAGG...GAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGTCACTTTGTACACTaGACACCAGGTGGCCTAGTC +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSGHFVH*TPGGLV
Trigger: GACTAGGCCACCTGGTGTGCAGTGTACAAAGTGACC...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp GGTGCAATTGCACACACAGTCCATGGACCATGGGGATGGGTATGTCTTCCCTTCGTGTATTCTGGGCTGTaGAAACATAGGTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: GAIAHTVHGPWGWVCLPFVYSGL*KHRCCH
Trigger: ATGGCAACACCTATGTTTGCACAGCCCAGAATACAC...GAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTGCAATTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTTGGAGACACCCCATGTaGTCTGGCCTAGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVAWRHPM*SGLVRR
Trigger: TCTTCTCACTAGGCCAGACCACATGGGGTGTCTCCA...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGAAGGTTGCACACCTTGTaGTCCATGTTCCCCATCAGT +
Preference number: 4 (lower is better)
Translates to: KASRAGQESQMSLYCLYRRLHTL*SMFPIS
Trigger: ACTGATGGGGAACATGGACCACAAGGTGTGCAACCT...TCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCACCTTTGGGGGCATGTaGCACTTGCAGGTAAACCTC +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSTFGGM*HLQVNL
Trigger: GAGGTTTACCTGCAAGTGCCACATGCCCCCAAAGGT...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGTCTGGAGTAAGGGGTaGATATCTGACCACCACACT +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWVWSKG*ISDHHT
Trigger: AGTGTGGTGGTCAGATATCCACCCCTTACTCCAGAC...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp ACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCTTCATAGAATGTGGGCTTTCTTaGGGGATAGAACACAGTGAG +
Preference number: 4 (lower is better)
Translates to: TLPSPCRVHGHCSYLSFIECGLS*GIEHSE
Trigger: CTCACTGTGTTCTATCCCCCAAGAAAGCCCACATTC...TATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp ACTGATATCCTGGCTGGTACAGACCGTCTTAGAAAGTCTGTGAGAAACTGGATGGGCCCAGTGTGTTGCTaGCTTCGCATGTATAGGTCC +
Preference number: 4 (lower is better)
Translates to: TDILAGTDRLRKSVRNWMGPVCC*LRMYRS
Trigger: GGACCTATACATGCGAAGCCAGCAACACACTGGGCC...CATCCAGTTTCTCACAGACTTTCTAAGACGGTCTGTACCAGCCAGGATATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp CAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGAGGTAGGCAGGATCAGCACCTTGCCATTGTaGGATAGGACCATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QVRKARCLCTAYTEVGRISTLPL*DRTISA
Trigger: TGCTGAGATGGTCCTATCCCACAATGGCAAGGTGCT...GATCCTGCCTACCTCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp GCACAGAAGAATAGAGTGGGAAAACCTGGGCTAATGATGGCTGAGTGCACCAGGGTGTATTCTGGGCTGTaGAAACATAGGTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: AQKNRVGKPGLMMAECTRVYSGL*KHRCCH
Trigger: ATGGCAACACCTATGTTTGCACAGCCCAGAATACAC...CCTGGTGCACTCAGCCATCATTAGCCCAGGTTTTCCCACTCTATTCTTCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR GCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGCCCTTGCTTTGTaGAGAGGAAAAGGCCTGATA +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWEALAL*RGKGLI
Trigger: TATCAGGCCTTTTCCTCTGCACAAAGCAAGGGCTTC...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp CCGCCATCGTCAATCTTTATGTATTATACTGAACCCCACTCCCACCCCATAAAGACCTTTGGGGGCATGTaGCACTTGCAGGTAAACCTC +
Preference number: 4 (lower is better)
Translates to: PPSSIFMYYTEPHSHPIKTFGGM*HLQVNL
Trigger: GAGGTTTACCTGCAAGTGCCACATGCCCCCAAAGGT...CTTTATGGGGTGGGAGTGGGGTTCAGTATAATACATAAAGATTGACGATGGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATGTGGGCTTTCTTaGGGGATAGAACACAGTGAG +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWECGLS*GIEHSE
Trigger: CTCACTGTGTTCTATCCCCCAAGAAAGCCCACATTC...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp TCCAGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTAGCACCTTGCCATTGTaGGATAGGACCATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SRRGSQILLWMVVSHHVVSTLPL*DRTISA
Trigger: TGCTGAGATGGTCCTATCCCACAATGGCAAGGTGCT...AACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGACACAGGGCAGAGATaGGTTCATACTCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: RRGSQILLWMVVSHHVVADTGQR*VHTHRG
Trigger: TCCTCTGTGAGTATGAACCCATCTCTGCCCTGTGTC...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGCCTCCATTTCAAAGCTaGGTACCCAAGCATGGATAC +
Preference number: 4 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWPPFQS*VPKHGY
Trigger: GTATCCATGCTTGGGTACCCAGCTTTGAAATGGAGG...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
3UTR CAA 72 bp GTTATCCTCAGACACTCCAGAAGAGGGAGTCAGATCTaGTTATGGATGGTTGTGAGCCACCATGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: VILRHSRRGSQI*LWMVVSHHVVA
Trigger: AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGAGTGTCTGAGGATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR TCA 90 bp TTCATAATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCCCTCACAGTCTCCAGTaGTCCCTGGGTCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: FIIKGNTWGMEKIKQEGFPHSLQ*SLGPQH
Trigger: GTGCTGTGGACCCAGGGATCACTGGAGACTGTGAGG...GAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp TTCATAATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCCCCTGGTGGCCACCCTaGGGCTCCACAAACACTATG +
Preference number: 4 (lower is better)
Translates to: FIIKGNTWGMEKIKQEGFPWWPP*GSTNTM
Trigger: CATAGTGTTTGTGGAGCCTCAGGGTGGCCACCAGGG...GAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp TTCATAATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCCTCAGGGTCACCGCCTaGCCTTCCACAACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FIIKGNTWGMEKIKQEGFLRVTA*PSTTSA
Trigger: AGCAGAGGTTGTGGAAGGGCAGGCGGTGACCCTGAG...GAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTTGATGGCAGAGAAGTaGCCACAACATGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSLMAEK*PQHGLC
Trigger: ACAAAGGCCATGTTGTGGCCACTTCTCTGCCATCAA...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp CACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTGATACCACAACAACATGTTCCAGGGACGTGTTaGCCTTGCCCAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: HLGNGENQARRILIPQQHVPGTC*PCPMGC
Trigger: ACAGCCCATTGGGCAAGGCCAACACGTCCCTGGAAC...ATGTTGTTGTGGTATCAGAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp CTAGACAACCGCCATCGTCAATCTTTATGTATTATACTGAACCCCACTCCCACCAGCGGTTGCTATCACTaGTCTCAAAGCGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LDNRHRQSLCIILNPTPTSGCYH*SQSGSC
Trigger: ACAACTTCCGCTTTGAGATCAGTGATAGCAACCGCT...GGTGGGAGTGGGGTTCAGTATAATACATAAAGATTGACGATGGCGGTTGTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR GCA 90 bp CACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTGATACCACAACAACATCTGACCACGGAGCAATaGAAGATGCCCACAAGTCCG +
Preference number: 4 (lower is better)
Translates to: HLGNGENQARRILIPQQHLTTEQ*KMPTSP
Trigger: CGGACTTGTGGGCATCTTGCATTGCTCCGTGGTCAG...ATGTTGTTGTGGTATCAGAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR GCA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGCAAACATAGGTGTTaGCATCACCCAGAGTCACAT +
Preference number: 4 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSCKHRC*HHPESH
Trigger: ATGTGACTCTGGGTGATGGCAACACCTATGTTTGCA...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp TTCATAATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTTGGGGTCCCCTGAGTaGATTACCACCTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: FIIKGNTWGMEKIKQEGFLGSPE*ITTCRL
Trigger: CAAGCGGCAGGTGGTAATCCACTCAGGGGACCCCAA...GAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GATATCCTGGCTGGTACAGACCGTCTTAGAAAGTCTGTGAGAAACTGGATGTTGTTGATGGCAGAGAAGTaGCCACAACATGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: DILAGTDRLRKSVRNWMLLMAEK*PQHGLC
Trigger: ACAAAGGCCATGTTGTGGCCACTTCTCTGCCATCAA...CAACATCCAGTTTCTCACAGACTTTCTAAGACGGTCTGTACCAGCCAGGATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp TCCAGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTCTGACCCAAGAATATTaGTGGCTTCACAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SRRGSQILLWMVVSHHVVLTQEY*WLHSGS
Trigger: ACTACCACTGTGAAGCCACCAATATTCTTGGGTCAG...AACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CCA 90 bp TTCATAATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCCTAGGCGCAGGGTGTTaGGGACAGAGGCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: FIIKGNTWGMEKIKQEGFLGAGC*GQRLQL
Trigger: CAACTGAAGCCTCTGTCCCCAACACCCTGCGCCTAG...GAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp AATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTGATAGACCATCTCAGCAGGTaGCTCACTGTCCACGGTGCA +
Preference number: 4 (lower is better)
Translates to: NQRQHLGNGENQARRILIDHLSR*LTVHGA
Trigger: TGCACCGTGGACAGTGAGCCACCTGCTGAGATGGTC...TATCAGAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp GATATCCTGGCTGGTACAGACCGTCTTAGAAAGTCTGTGAGAAACTGGATGTTGCATCGTGAAGTTGGTTaGAGGCTACTAGTTGACTGC +
Preference number: 4 (lower is better)
Translates to: DILAGTDRLRKSVRNWMLHREVG*RLLVDC
Trigger: GCAGTCAACTAGTAGCCTCCAACCAACTTCACGATG...CAACATCCAGTTTCTCACAGACTTTCTAAGACGGTCTGTACCAGCCAGGATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp ACTGATATCCTGGCTGGTACAGACCGTCTTAGAAAGTCTGTGAGAAACTGGATGCTGACCCAAGAATATTaGTGGCTTCACAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: TDILAGTDRLRKSVRNWMLTQEY*WLHSGS
Trigger: ACTACCACTGTGAAGCCACCAATATTCTTGGGTCAG...CATCCAGTTTCTCACAGACTTTCTAAGACGGTCTGTACCAGCCAGGATATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp AATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTGATAAGTTGGAGGTTCTGCTaGCTTTTGTGCGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: NQRQHLGNGENQARRILISWRFC*LLCAGN
Trigger: GTTCCCAGCGCACAAAAGTCAGCAGAACCTCCAACT...TATCAGAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp AATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTGATACATGAGCCTGGTCCTTaGGTCTCGAAAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: NQRQHLGNGENQARRILIHEPGP*VSKGRQ
Trigger: CTGTCTTCCTTTCGAGACTCAAGGACCAGGCTCATG...TATCAGAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CCA 90 bp TTCATAATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCACCTTTGGGGGCATGTaGCACTTGCAGGTAAACCTC +
Preference number: 4 (lower is better)
Translates to: FIIKGNTWGMEKIKQEGFTFGGM*HLQVNL
Trigger: GAGGTTTACCTGCAAGTGCCACATGCCCCCAAAGGT...GAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR TCA 90 bp CACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTGATACCACAACAACATAGTGGCCATCTCTGCTaGATTCTCATCCTCATTCAG +
Preference number: 4 (lower is better)
Translates to: HLGNGENQARRILIPQQHSGHLC*ILILIQ
Trigger: CTGAATGAGGATGAGAATTCAGCAGAGATGGCCACT...ATGTTGTTGTGGTATCAGAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
3UTR CAA 72 bp CTGCAGTTACCTGAGCTTCATAATCAAAGGCAACACTaGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: LQLPELHNQRQH*GNGENQARRIL
Trigger: CAGAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAAGCTCAGGTAACTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS TCA 90 bp GGAGGGGCCGCTGGTGTTGGGGCCAGCCTGCGTCCTACAGTAGTATaGGCCCGCATCAGTGCTGGAAGCCGCAGGAAGCAGGAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GGAAGVGASLRPTVV*ARISAGSRRKQEAA
Trigger: AGCAGCCTCCTGCTTCCTGCGGCTTCCAGCACTGATGCGGGCTCATACTACTGTAGGACGCAGGCTGGCCCCAACACCAGCGGCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp TCAGGAGCTGGGCTCAGGCCACTCCTGCAGCTCAGGGTCACCGCCTaGCCTTCCACAACCTCTGCTGAAGGGTTGATGAGGAGTCGGGCC +
Preference number: 5 (lower is better)
Translates to: SGAGLRPLLQLRVTA*PSTTSAEGLMRSRA
Trigger: GGCCCGACTCCTCATCAACCCTTCAGCAGAGGTTGTGGAAGGGCAGGCGGTGACCCTGAGCTGCAGGAGTGGCCTGAGCCCAGCTCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp AGTCCGTCTCAGAGCCCTGGAGGCGGCAGGTTGACCTCCAACCCCAAACCTCCCTCTAGCTGCAGGGAGTaGGCTGTGGCCTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SPSQSPGGGRLTSNPKPPSSCRE*AVALAW
Trigger: CCAGGCCAAGGCCACAGCCAACTCCCTGCAGCTAGA...GGGAGGTTTGGGGTTGGAGGTCAACCTGCCGCCTCCAGGGCTCTGAGACGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS TCA 90 bp CAGCCCTGCAGTGGTACAGCCCAGCCTGAGCCCGGACCACAGGGGTaGAGGAGAGTGTGGGCACAGGAGCTGAATGTAGTCGGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: QPCSGTAQPEPGPQG*RRVWAQELNVVGGD
Trigger: ATCGCCACCGACTACATTCAGCTCCTGTGCCCACACTCTCCTTCACCCCTGTGGTCCGGGCTCAGGCTGGGCTGTACCACTGCAGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp GGTACCAGGAGAAGCGAGTGTCAGGAGCTGGGCTCAGGCCACTCCTaGAGCTCAGGGTCACCGCCTGCCCTTCCACAACCTCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GTRRSECQELGSGHS*SSGSPPALPQPLLK
Trigger: CTTCAGCAGAGGTTGTGGAAGGGCAGGCGGTGACCCTGAGCTGCAGGAGTGGCCTGAGCCCAGCTCCTGACACTCGCTTCTCCTGGTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp CAGGTGGACGACTATCCACCGTACACAGTACCAGGGCCAGCTGCCTaGCCTGGGTCTCTAGGAGGTAGGTCAGCCGCAGGTTTCGGGGAG +
Preference number: 5 (lower is better)
Translates to: QVDDYPPYTVPGPAA*PGSLGGRSAAGFGE
Trigger: CTCCCCGAAACCTGCGGCTGACCTACCTCCTAGAGACCCAGGGCAGGCAGCTGGCCCTGGTACTGTGTACGGTGGATAGTCGTCCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp CCTTGGCCTGGATCCTGCCATGGGAGGGACGCTGGGGTTCCAAGTTaGTGGCCAGGAGATGGTCCCCACGGAACAGAGACAGGTGAGCCA +
Preference number: 5 (lower is better)
Translates to: PWPGSCHGRDAGVPS*WPGDGPHGTETGEP
Trigger: TGGCTCACCTGTCTCTGTTCCGTGGGGACCATCTCCTGGCCACCAACTTGGAACCCCAGCGTCCCTCCCATGGCAGGATCCAGGCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp GAGTTGGCTGTGGCCTTGGCCTGGATCCTGCCATGGGAGGGACGCTaGGGTTCCAAGTTGGTGGCCAGGAGATGGTCCCCACGGAACAGA +
Preference number: 5 (lower is better)
Translates to: ELAVALAWILPWEGR*GSKLVARRWSPRNR
Trigger: TCTGTTCCGTGGGGACCATCTCCTGGCCACCAACTTGGAACCCCAGCGTCCCTCCCATGGCAGGATCCAGGCCAAGGCCACAGCCAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp CCCTCTTGCACAGTGGCATTGGGCCACACAGTCACTCGCACAGCCTaGGCATCGAAGTCAGCTGCAGCCGAGGCCTGGCCCAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: PSCTVALGHTVTRTA*ASKSAAAEAWPSVL
Trigger: CAACACACTGGGCCAGGCCTCGGCTGCAGCTGACTTCGATGCCCAGGCTGTGCGAGTGACTGTGTGGCCCAATGCCACTGTGCAAGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 90 bp GCACACTTAGGACCACAGGAGCCGAGAGCTGAGCCCCATCCTCGGTaGGGAGGCGGCAGGCATAGACAGCAGCATCAGTTCTGGCCACAG +
Preference number: 5 (lower is better)
Translates to: AHLGPQEPRAEPHPR*GGGRHRQQHQFWPQ
Trigger: CTGTGGCCAGAACTGATGCTGCTGTCTATGCCTGCCGCCTCCTCACCGAGGATGGGGCTCAGCTCTCGGCTCCTGTGGTCCTAAGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp CCACAAGACCTAGTTCTCGGACCTCTAGCTGCAGGGAGTTGGCTGTaGCCTTGGCCTGGATCCTGCCATGGGAGGGACGCTGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: PQDLVLGPLAAGSWL*PWPGSCHGRDAGVP
Trigger: TGGAACCCCAGCGTCCCTCCCATGGCAGGATCCAGGCCAAGGCCACAGCCAACTCCCTGCAGCTAGAGGTCCGAGAACTAGGTCTTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp CAGAGTCCACAAGACCTAGTTCTCGGACCTCTAGCTGCAGGGAGTTaGCTGTGGCCTTGGCCTGGATCCTGCCATGGGAGGGACGCTGGG +
Preference number: 5 (lower is better)
Translates to: QSPQDLVLGPLAAGS*LWPWPGSCHGRDAG
Trigger: CCCAGCGTCCCTCCCATGGCAGGATCCAGGCCAAGGCCACAGCCAACTCCCTGCAGCTAGAGGTCCGAGAACTAGGTCTTGTGGACTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp TCGCTCAGGGTCCGTGCTCAGCAGGGCACTGAGTGTAACATGACGTaGGGTATAGGACACATGGAGGCTGACAGGGGCAGCCAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SLRVRAQQGTECNMT*GIGHMEADRGSQAG
Trigger: GCCAGCCTGGCTGCCCCTGTCAGCCTCCATGTGTCCTATACCCCACGTCATGTTACACTCAGTGCCCTGCTGAGCACGGACCCTGAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp TGTTGGGGCCAGCCTGCGTCCTACAGTAGTATGAGCCCGCATCAGTaGTGGAAGCCGCAGGAAGCAGGAGGCTGCTGCTGGATCCTTCCA +
Preference number: 5 (lower is better)
Translates to: CWGQPASYSSMSPHQ*WKPQEAGGCCWILP
Trigger: TGGAAGGATCCAGCAGCAGCCTCCTGCTTCCTGCGGCTTCCAGCACTGATGCGGGCTCATACTACTGTAGGACGCAGGCTGGCCCCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp TCCGGTGAAACAGTTGCAGCTGCGCTGGAGGGTCACTTTGTACACTaGACACCAGGTGGCCTAGTCGCTCAGGGTCCGTGCTCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SGETVAAALEGHFVH*TPGGLVAQGPCSAG
Trigger: CCCTGCTGAGCACGGACCCTGAGCGACTAGGCCACCTGGTGTGCAGTGTACAAAGTGACCCTCCAGCGCAGCTGCAACTGTTTCACCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp CCTGGGCATCGAAGTCAGCTGCAGCCGAGGCCTGGCCCAGTGTGTTaGTGGCTTCGCATGTATAGGTCCCGTCATCCTCCAGCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: PGHRSQLQPRPGPVC*WLRMYRSRHPPALE
Trigger: TTCCAGAGCTGGAGGATGACGGGACCTATACATGCGAAGCCAGCAACACACTGGGCCAGGCCTCGGCTGCAGCTGACTTCGATGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp TGGGGCCAGCCTGCGTCCTACAGTAGTATGAGCCCGCATCAGTGCTaGAAGCCGCAGGAAGCAGGAGGCTGCTGCTGGATCCTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: WGQPASYSSMSPHQC*KPQEAGGCCWILPE
Trigger: TTCTGGAAGGATCCAGCAGCAGCCTCCTGCTTCCTGCGGCTTCCAGCACTGATGCGGGCTCATACTACTGTAGGACGCAGGCTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp CCAAGCAGGTCAGGTTCACCTGCTGCCCCTCTTGCACAGTGGCATTaGGCCACACAGTCACTCGCACAGCCTGGGCATCGAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: PSRSGSPAAPLAQWH*ATQSLAQPGHRSQL
Trigger: CAGCTGACTTCGATGCCCAGGCTGTGCGAGTGACTGTGTGGCCCAATGCCACTGTGCAAGAGGGGCAGCAGGTGAACCTGACCTGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 90 bp TCTGCAGGTGAGTGTGACTGGATCCCCGGGAAGGATGTTCCTCCCTaGGGAGCTGAGGAGGATCTCCACACCTTTGGGGGCATGTGGCAC +
Preference number: 5 (lower is better)
Translates to: SAGECDWIPGKDVPP*GAEEDLHTFGGMWH
Trigger: GTGCCACATGCCCCCAAAGGTGTGGAGATCCTCCTCAGCTCCTCAGGGAGGAACATCCTTCCCGGGGATCCAGTCACACTCACCTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS TCA 90 bp CTCCTGAAGCCAATGGCCATTGTGAAACCAGGCATAGAGGGCGGATaGGAGGGCAGCAGGGTCCTCGCAGGTCACTGTGACAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LLKPMAIVKPGIEGG*EGSRVLAGHCDRLS
Trigger: GGAGAGCCTGTCACAGTGACCTGCGAGGACCCTGCTGCCCTCTCATCCGCCCTCTATGCCTGGTTTCACAATGGCCATTGGCTTCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp TGTGACAGCACCACAGTAGCCAGGGGCTCACTGACCACGGAGCAATaGAAGATGCCCACAAGTCCGGCCTGTGTCTCCAGGAAGGTGGTC +
Preference number: 5 (lower is better)
Translates to: CDSTTVARGSLTTEQ*KMPTSPACVSRKVV
Trigger: GACCACCTTCCTGGAGACACAGGCCGGACTTGTGGGCATCTTGCATTGCTCCGTGGTCAGTGAGCCCCTGGCTACTGTGGTGCTGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp ATTGGGCCACACAGTCACTCGCACAGCCTGGGCATCGAAGTCAGCTaGAGCCGAGGCCTGGCCCAGTGTGTTGCTGGCTTCGCATGTATA +
Preference number: 5 (lower is better)
Translates to: IGPHSHSHSLGIEVS*SRGLAQCVAGFACI
Trigger: TATACATGCGAAGCCAGCAACACACTGGGCCAGGCCTCGGCTGCAGCTGACTTCGATGCCCAGGCTGTGCGAGTGACTGTGTGGCCCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp AGCCCGCATCAGTGCTGGAAGCCGCAGGAAGCAGGAGGCTGCTGCTaGATCCTTCCAGAAGTAGAGCTCCGTTCAGGTACCAGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SPHQCWKPQEAGGCC*ILPEVELRSGTRRS
Trigger: GCTTCTCCTGGTACCTGAACGGAGCTCTACTTCTGGAAGGATCCAGCAGCAGCCTCCTGCTTCCTGCGGCTTCCAGCACTGATGCGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp CTCCCACACCTTGATGGCAGAGAAGTGGCCACAACATGGCCTTTGTaGAGAAGCCGTAGCTGGGCTGGGGGATCGCTGTCTACGTGGCAC +
Preference number: 5 (lower is better)
Translates to: LPHLDGREVATTWPL*RSRSWAGGSLSTWH
Trigger: GTGCCACGTAGACAGCGATCCCCCAGCCCAGCTACGGCTTCTCCACAAAGGCCATGTTGTGGCCACTTCTCTGCCATCAAGGTGTGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp TCAGTTCTGGCCACAGGCTGCAGCCTCACAGTCTCCAGTGATCCCTaGGTCCACAGCACTCCATTCCGGAACCAGGAGAAGTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SVLATGCSLTVSSDP*VHSTPFRNQEKLAG
Trigger: CCCTGCCAACTTCTCCTGGTTCCGGAATGGAGTGCTGTGGACCCAGGGATCACTGGAGACTGTGAGGCTGCAGCCTGTGGCCAGAACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp AGTTGCAGCTGCGCTGGAGGGTCACTTTGTACACTGCACACCAGGTaGCCTAGTCGCTCAGGGTCCGTGCTCAGCAGGGCACTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: SCSCAGGSLCTLHTR*PSRSGSVLSRALSV
Trigger: TACACTCAGTGCCCTGCTGAGCACGGACCCTGAGCGACTAGGCCACCTGGTGTGCAGTGTACAAAGTGACCCTCCAGCGCAGCTGCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 90 bp GGAACAGAGACAGGTGAGCCAGGGGATAGCTGTCCACAGTGCAGATaGACACGGCCATGTGGCCCTGACCCACATCTAGGAGGGCTGACA +
Preference number: 5 (lower is better)
Translates to: GTETGEPGDSCPQCR*TRPCGPDPHLGGLT
Trigger: TGTCAGCCCTCCTAGATGTGGGTCAGGGCCACATGGCCGTGTTCATCTGCACTGTGGACAGCTATCCCCTGGCTCACCTGTCTCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 90 bp GCATTTCGGGCTACCTGGATGTGGCCTATCCCTGATGCTGAGCTGTaGCGCTCGTGGCTGGCAGCTAGCACCTTGCCATTGTGGGATAGG +
Preference number: 5 (lower is better)
Translates to: AFRATWMWPIPDAEL*RSWLAASTLPLWDR
Trigger: CCTATCCCACAATGGCAAGGTGCTAGCTGCCAGCCACGAGCGTCACAGCTCAGCATCAGGGATAGGCCACATCCAGGTAGCCCGAAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp ATGAGCCCGCATCAGTGCTGGAAGCCGCAGGAAGCAGGAGGCTGCTaGTGGATCCTTCCAGAAGTAGAGCTCCGTTCAGGTACCAGGAGA +
Preference number: 5 (lower is better)
Translates to: MSPHQCWKPQEAGGC*WILPEVELRSGTRR
Trigger: TCTCCTGGTACCTGAACGGAGCTCTACTTCTGGAAGGATCCAGCAGCAGCCTCCTGCTTCCTGCGGCTTCCAGCACTGATGCGGGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp TCCCTGATGCTGAGCTGTGACGCTCGTGGCTGGCAGCTAGCACCTTaGCATTGTGGGATAGGACCATCTCAGCAGGTGGCTCACTGTCCA +
Preference number: 5 (lower is better)
Translates to: SLMLSCDARGWQLAP*HCGIGPSQQVAHCP
Trigger: TGGACAGTGAGCCACCTGCTGAGATGGTCCTATCCCACAATGGCAAGGTGCTAGCTGCCAGCCACGAGCGTCACAGCTCAGCATCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp TCCGGCCTGTGTCTCCAGGAAGGTGGTCAGGTCTGGAGTAAGGGGTaGATATCTGACCACCACACTCAATGGACTGGAGCGCTCACTGCC +
Preference number: 5 (lower is better)
Translates to: SGLCLQEGGQVWSKG*ISDHHTQWTGALTA
Trigger: GGCAGTGAGCGCTCCAGTCCATTGAGTGTGGTGGTCAGATATCCACCCCTTACTCCAGACCTGACCACCTTCCTGGAGACACAGGCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp CTTTTGTGCGCTGGGAACAGCTCCCACACCTTGATGGCAGAGAAGTaGCCACAACATGGCCTTTGTGGAGAAGCCGTAGCTGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LLCAGNSSHTLMAEK*PQHGLCGEAVAGLG
Trigger: CCCCAGCCCAGCTACGGCTTCTCCACAAAGGCCATGTTGTGGCCACTTCTCTGCCATCAAGGTGTGGGAGCTGTTCCCAGCGCACAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp CCTGGATGTGGCCTATCCCTGATGCTGAGCTGTGACGCTCGTGGCTaGCAGCTAGCACCTTGCCATTGTGGGATAGGACCATCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: PGCGLSLMLSCDARG*QLAPCHCGIGPSQQ
Trigger: CTGCTGAGATGGTCCTATCCCACAATGGCAAGGTGCTAGCTGCCAGCCACGAGCGTCACAGCTCAGCATCAGGGATAGGCCACATCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp ACCCCACTCCCACCCCATAAAGCAGAGGCCTCCTGGAGTCACCTGCTTTGCCTCGTGACCGTGGTGCCTTaGACATCTAACCAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: TPLPPHKAEASWSHLLCLVTVVP*TSNQRL
Trigger: CAACCGCTGGTTAGATGTCAAAGGCACCACGGTCAC...GAGGCAAAGCAGGTGACTCCAGGAGGCCTCTGCTTTATGGGGTGGGAGTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CAA 90 bp AGTCCGTCTCAGAGCCCTGGAGGCGGCAGGTTGACCTCCAACCCCAAACCTCCCCATATCATTTGTTGCTaGGCAGGTGTAGGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: SPSQSPGGGRLTSNPKPPHIICC*AGVGPR
Trigger: TCTGGGGCCTACACCTGCCAAGCAACAAATGATATG...GGGAGGTTTGGGGTTGGAGGTCAACCTGCCGCCTCCAGGGCTCTGAGACGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCCACCTGCTGCCCCTCTaGCACAGTGGCATTGGGCCA +
Preference number: 5 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCHLLPL*HSGIGP
Trigger: TGGCCCAATGCCACTGTGCAAGAGGGGCAGCAGGTG...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS TCA 90 bp GAAGTCATTTTCTCCAGAGTTGGAGGCCAACGTGAGGCCTCCGTGTaGCAGCACCACAGTAGCCAGGGGCTCACTGACCACGGAGCAATG +
Preference number: 5 (lower is better)
Translates to: EVIFSRVGGQREASV*QHHSSQGLTDHGAM
Trigger: CATTGCTCCGTGGTCAGTGAGCCCCTGGCTACTGTGGTGCTGTCACACGGAGGCCTCACGTTGGCCTCCAACTCTGGAGAAAATGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 90 bp GGGTCCACAGCACTCCATTCCGGAACCAGGAGAAGTTGGCAGGGCTaGCAGCAACCTCCTGGTTCACGTTGCAAGTTAGGTTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: GSTALHSGTRRSWQG*QQPPGSRCKLGWPL
Trigger: CAGAGGCCAACCTAACTTGCAACGTGAACCAGGAGGTTGCTGTCAGCCCTGCCAACTTCTCCTGGTTCCGGAATGGAGTGCTGTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 90 bp AATTCGTCCGCGCCTTGTAGGGTAGAGGCCACGAGGCGATTCCGGTaGAACAGTTGCAGCTGCGCTGGAGGGTCACTTTGTACACTGCAC +
Preference number: 5 (lower is better)
Translates to: NSSAPCRVEATRRFR*NSCSCAGGSLCTLH
Trigger: GTGCAGTGTACAAAGTGACCCTCCAGCGCAGCTGCAACTGTTTCACCGGAATCGCCTCGTGGCCTCTACCCTACAAGGCGCGGACGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 90 bp CATAGAGGGCGGATGAGAGGGCAGCAGGGTCCTCGCAGGTCACTGTaGCAGGCTCTCCCTCGGGTACACTACCAGAGGGATTCATTTTCA +
Preference number: 5 (lower is better)
Translates to: HRGRMRGQQGPRRSL*QALPRVHYQRDSFS
Trigger: TGAAAATGAATCCCTCTGGTAGTGTACCCGAGGGAGAGCCTGTCACAGTGACCTGCGAGGACCCTGCTGCCCTCTCATCCGCCCTCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp TCTTGTACCAGCTATAGCGGAGCTCCTGGGGAGCCTCCTTCGGCGTaGTACAGAGCAGAGTCACTGTCTCATTTTCCAAGACGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: SCTSYSGAPGEPPSA*YRAESLSHFPRRAL
Trigger: CAGGGCCCGTCTTGGAAAATGAGACAGTGACTCTGCTCTGTAGCACGCCGAAGGAGGCTCCCCAGGAGCTCCGCTATAGCTGGTACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp AGGGAGTTGACAGCTAAGCATGTGTACTCTCCGCTGTCTGCTGGCTaGAAGTCTCGGATTTCTAGGCGCAGGGAGTTGGGGGCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: RELTAKHVYSPLSAG*KSRISRRRELGAEE
Trigger: CTCCTCTGCCCCCAACTCCCTGCGCCTAGAAATCCGAGACTTGCAGCCAGCAGACAGCGGAGAGTACACATGCTTAGCTGTCAACTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 90 bp TCACTCGGACACCTTCCAGCAGAAGTTCCAGGGACGTGTTGGCCTTaGCCAATGGGCTGTGGGCAGAGCAGCTATAGAGCCCCTCATTAC +
Preference number: 5 (lower is better)
Translates to: SLGHLPAEVPGTCWP*PMGCGQSSYRAPHY
Trigger: GTAATGAGGGGCTCTATAGCTGCTCTGCCCACAGCCCATTGGGCAAGGCCAACACGTCCCTGGAACTTCTGCTGGAAGGTGTCCGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp CGTCATCCTCCAGCTCTGGAAAGTGGATCTGCAGGCGCAGCTCATTaGGGAGCACAGTCACATGCAGCCGGGGATTACTGCCTGCCAATT +
Preference number: 5 (lower is better)
Translates to: RHPPALESGSAGAAH*GAQSHAAGDYCLPI
Trigger: AATTGGCAGGCAGTAATCCCCGGCTGCATGTGACTGTGCTCCCCAATGAGCTGCGCCTGCAGATCCACTTTCCAGAGCTGGAGGATGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp TCAGTTGAGGAGGCTACAAGCTGGTCACCATGGCTGAGAGTTAGCTaGGCAGGTGGACGACTATCCACCGTACACAGTACCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SVEEATSWSPWLRVS*AGGRLSTVHSTRAS
Trigger: GCTGGCCCTGGTACTGTGTACGGTGGATAGTCGTCCACCTGCCCAGCTAACTCTCAGCCATGGTGACCAGCTTGTAGCCTCCTCAACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp GACACCTTCCAGCAGAAGTTCCAGGGACGTGTTGGCCTTGCCCAATaGGCTGTGGGCAGAGCAGCTATAGAGCCCCTCATTACTAGGCCT +
Preference number: 5 (lower is better)
Translates to: DTFQQKFQGRVGLAQ*AVGRAAIEPLITRP
Trigger: AGGCCTAGTAATGAGGGGCTCTATAGCTGCTCTGCCCACAGCCCATTGGGCAAGGCCAACACGTCCCTGGAACTTCTGCTGGAAGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp GGATACAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTCACCTGCTGCCCCTCTaGCACAGTGGCATTGGGCCA +
Preference number: 5 (lower is better)
Translates to: GYRGKPHRETWATWLSPSHLLPL*HSGIGP
Trigger: TGGCCCAATGCCACTGTGCAAGAGGGGCAGCAGGTG...AGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS CCA 90 bp GATGCCCACAAGTCCGGCCTGTGTCTCCAGGAAGGTGGTCAGGTCTaGAGTAAGGGGTGGATATCTGACCACCACACTCAATGGACTGGA +
Preference number: 5 (lower is better)
Translates to: DAHKSGLCLQEGGQV*SKGWISDHHTQWTG
Trigger: TCCAGTCCATTGAGTGTGGTGGTCAGATATCCACCCCTTACTCCAGACCTGACCACCTTCCTGGAGACACAGGCCGGACTTGTGGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp CCATTCCGGAACCAGGAGAAGTTGGCAGGGCTGACAGCAACCTCCTaGTTCACGTTGCAAGTTAGGTTGGCCTCTGTGCCTTCACGCAGT +
Preference number: 5 (lower is better)
Translates to: PFRNQEKLAGLTATS*FTLQVRLASVPSRS
Trigger: ACTGCGTGAAGGCACAGAGGCCAACCTAACTTGCAACGTGAACCAGGAGGTTGCTGTCAGCCCTGCCAACTTCTCCTGGTTCCGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp TGTGTTGCTGGCTTCGCATGTATAGGTCCCGTCATCCTCCAGCTCTaGAAAGTGGATCTGCAGGCGCAGCTCATTGGGGAGCACAGTCAC +
Preference number: 5 (lower is better)
Translates to: CVAGFACIGPVILQL*KVDLQAQLIGEHSH
Trigger: GTGACTGTGCTCCCCAATGAGCTGCGCCTGCAGATCCACTTTCCAGAGCTGGAGGATGACGGGACCTATACATGCGAAGCCAGCAACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp TCATTTTCACTCGGACACCTTCCAGCAGAAGTTCCAGGGACGTGTTaGCCTTGCCCAATGGGCTGTGGGCAGAGCAGCTATAGAGCCCCT +
Preference number: 5 (lower is better)
Translates to: SFSLGHLPAEVPGTC*PCPMGCGQSSYRAP
Trigger: AGGGGCTCTATAGCTGCTCTGCCCACAGCCCATTGGGCAAGGCCAACACGTCCCTGGAACTTCTGCTGGAAGGTGTCCGAGTGAAAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp CCCATAAAGCAGAGGCCTCCTGGAGTCACCTGCTTTGCCTCATCCCATTCCCAGAAGCCCTGCACATTCTaGGGACTGGAGACACCCCAT +
Preference number: 5 (lower is better)
Translates to: PIKQRPPGVTCFASSHSQKPCTF*GLETPH
Trigger: ATGGGGTGTCTCCAGTCCCAAGAATGTGCAGGGCTT...CTGGGAATGGGATGAGGCAAAGCAGGTGACTCCAGGAGGCCTCTGCTTTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CAA 90 bp CTCCCACCCCATAAAGCAGAGGCCTCCTGGAGTCACCTGCTTTGCCTCATCCCAAACAGGTTGCACACCTaGTGGTCCATGTTCCCCATC +
Preference number: 5 (lower is better)
Translates to: LPPHKAEASWSHLLCLIPNRLHT*WSMFPI
Trigger: GATGGGGAACATGGACCACAAGGTGTGCAACCTGTT...TGGGATGAGGCAAAGCAGGTGACTCCAGGAGGCCTCTGCTTTATGGGGTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CAA 90 bp CCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCTTCATAATCAAAGGCAACAGGGACGTGTTGGCCTaGCCCAATGGGCTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: PCRVHGHCSYLSFIIKGNRDVLA*PNGLWA
Trigger: TGCCCACAGCCCATTGGGCAAGGCCAACACGTCCCT...GTTGCCTTTGATTATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS TCA 90 bp GGGCATTCTGCACTTCACAGAAGTAGAAGCCAGTATCAGCCCTGGTaGCTGCAGGCAGGTGCAAGGTTGAGGCATGGGCATCTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: GHSALHRSRSQYQPW*LQAGARLRHGHLPG
Trigger: TCCTGGAAGATGCCCATGCCTCAACCTTGCACCTGCCTGCAGTCACCAGGGCTGATACTGGCTTCTACTTCTGTGAAGTGCAGAATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 90 bp GGACAGAGGCTTCAGTTGAGGAGGCTACAAGCTGGTCACCATGGCTaGGAGTTAGCTGGGCAGGTGGACGACTATCCACCGTACACAGTA +
Preference number: 5 (lower is better)
Translates to: GQRLQLRRLQAGHHG*ELAGQVDDYPPYTV
Trigger: TACTGTGTACGGTGGATAGTCGTCCACCTGCCCAGCTAACTCTCAGCCATGGTGACCAGCTTGTAGCCTCCTCAACTGAAGCCTCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp GCCCGAGTAGTCATAGTACCAGATGGCTGTGATGCCATTGGACACTaGGACATCGGCAGGGTAGCTGAAGATGCAGGGAATGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: ARVVIVPDGCDAIGH*DIGRVAEDAGNEQA
Trigger: TGCCTGCTCATTCCCTGCATCTTCAGCTACCCTGCCGATGTCCCAGTGTCCAATGGCATCACAGCCATCTGGTACTATGACTACTCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp AAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGACGCTGGGGTTCCAAGTaGGTGGCCAGGAGATGGTCC +
Preference number: 5 (lower is better)
Translates to: KASRAGQESQMSLYCLYRRWGSK*VARRWS
Trigger: GGACCATCTCCTGGCCACCAACTTGGAACCCCAGCG...TCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGAGGGACGTGTTGGCCTaGCCCAATGGGCTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWRDVLA*PNGLWA
Trigger: TGCCCACAGCCCATTGGGCAAGGCCAACACGTCCCT...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS TCA 90 bp TGTGATGACCAGTACAGTGGCCTTAGCATTGAAAGAGGCTGCGGCTaGGGAGTTGCCCAATGTGTTGCTAGCCTCACACAGGTACACGCC +
Preference number: 5 (lower is better)
Translates to: CDDQYSGLSIERGCG*GVAQCVASLTQVHA
Trigger: GGCGTGTACCTGTGTGAGGCTAGCAACACATTGGGCAACTCCTCAGCCGCAGCCTCTTTCAATGCTAAGGCCACTGTACTGGTCATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp ATCTCCACGTGCAGTGAGTTGGAGGTTCTGCTGACTTTTGTGCGCTaGGAACAGCTCCCACACCTTGATGGCAGAGAAGTGGCCACAACA +
Preference number: 5 (lower is better)
Translates to: ISTCSELEVLLTFVR*EQLPHLDGREVATT
Trigger: TGTTGTGGCCACTTCTCTGCCATCAAGGTGTGGGAGCTGTTCCCAGCGCACAAAAGTCAGCAGAACCTCCAACTCACTGCACGTGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 90 bp CCTGGCTCAGCTGTCACACGTATATCAGTCTCCGTCAGAAGCCTCTaGGTGGTACTGATGGAGCCCAGTGTATTCTGGGCTGTGCAAACA +
Preference number: 5 (lower is better)
Translates to: PGSAVTRISVSVRSL*VVLMEPSVFWAVQT
Trigger: TGTTTGCACAGCCCAGAATACACTGGGCTCCATCAGTACCACCCAGAGGCTTCTGACGGAGACTGATATACGTGTGACAGCTGAGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp GGATACAGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTAAGCCCTGCACATTCTaGGGACTGGAGACACCCCAT +
Preference number: 5 (lower is better)
Translates to: GYRGKPHRETWATWLSPSKPCTF*GLETPH
Trigger: ATGGGGTGTCTCCAGTCCCAAGAATGTGCAGGGCTT...AGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCTGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp AGAGGAAAACCACACAGAGAGACGTGGGCAACATGGCTGAGTCCGTCTCAGAGCAACAGGTTGCACACCTaGTGGTCCATGTTCCCCATC +
Preference number: 5 (lower is better)
Translates to: RGKPHRETWATWLSPSQSNRLHT*WSMFPI
Trigger: GATGGGGAACATGGACCACAAGGTGTGCAACCTGTT...GCTCTGAGACGGACTCAGCCATGTTGCCCACGTCTCTCTGTGTGGTTTTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTCTAGGCGCAGGGAGTaGGGGGCAGAGGAGATCCTG +
Preference number: 5 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSSRRRE*GAEEIL
Trigger: CAGGATCTCCTCTGCCCCCAACTCCCTGCGCCTAGA...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp TCCAGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTCGCTGGGGTTCCAAGTaGGTGGCCAGGAGATGGTCC +
Preference number: 5 (lower is better)
Translates to: SRRGSQILLWMVVSHHVVRWGSK*VARRWS
Trigger: GGACCATCTCCTGGCCACCAACTTGGAACCCCAGCG...AACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTTCTAGCTGCAGGGAGTaGGCTGTGGCCTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RRGSQILLWMVVSHHVVASSCRE*AVALAW
Trigger: CCAGGCCAAGGCCACAGCCAACTCCCTGCAGCTAGA...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp CAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGAGGTAGGCAGGATCAGTTCCAGGGACGTGTaGGCCTTGCCCAATGGGCTG +
Preference number: 5 (lower is better)
Translates to: QVRKARCLCTAYTEVGRISSRDV*ALPNGL
Trigger: CAGCCCATTGGGCAAGGCCAACACGTCCCTGGAACT...GATCCTGCCTACCTCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCGCTAGCACCTTGCCATaGTGGGATAGGACCATCTCA +
Preference number: 5 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCASTLP*WDRTIS
Trigger: TGAGATGGTCCTATCCCACAATGGCAAGGTGCTAGC...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp ACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCTTCATATCCACTCTCAAGGCATaGGGAGGAGCAGTGACTCGG +
Preference number: 5 (lower is better)
Translates to: TLPSPCRVHGHCSYLSFISTLKA*GGAVTR
Trigger: CCGAGTCACTGCTCCTCCCAATGCCTTGAGAGTGGA...TATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp CACACACAGTCCATGGACCATGGGGATGGGTATGTCTTCCCTTCACTCTTCCTTGCAGAGCCCAGAGTGTaGGAGGCAGTGCACACATAC +
Preference number: 5 (lower is better)
Translates to: HTQSMDHGDGYVFPSLFLAEPRV*EAVHTY
Trigger: GTATGTGTGCACTGCCTCCAACACTCTGGGCTCTGC...AAGGAAGAGTGAAGGGAAGACATACCCATCCCCATGGTCCATGGACTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp AAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGACTGGAACAGCTGCAGTaGGTGCAGAGCTCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: KASRAGQESQMSLYCLYRLEQLQ*VQSSGP
Trigger: GGGACCAGAGCTCTGCACCAACTGCAGCTGTTCCAG...TCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS TCA 90 bp CAGCCTCATCCAGGACTCACTAAAAACATGGAGGCTGAGCGGGGATaGCACCAGAGAGCCCATATCATTTGTTGCTTGGCAGGTGTAGGC +
Preference number: 5 (lower is better)
Translates to: QPHPGLTKNMEAERG*HQRAHIICCLAGVG
Trigger: GCCTACACCTGCCAAGCAACAAATGATATGGGCTCTCTGGTGTCATCCCCGCTCAGCCTCCATGTTTTTAGTGAGTCCTGGATGAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CAA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTCCACTGCAGGCTGACTaGCTTCTCCTGCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: RRGSQILLWMVVSHHVVAPLQAD*LLLQAQ
Trigger: CTGTGCCTGCAGGAGAAGCAAGTCAGCCTGCAGTGG...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCCATATCATTTGTTGCTaGGCAGGTGTAGGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCHIICC*AGVGPR
Trigger: TCTGGGGCCTACACCTGCCAAGCAACAAATGATATG...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp GATATCCTGGCTGGTACAGACCGTCTTAGAAAGTCTGTGAGAAACTGGATGTTGTCTAGGCGCAGGGAGTaGGGGGCAGAGGAGATCCTG +
Preference number: 5 (lower is better)
Translates to: DILAGTDRLRKSVRNWMLSRRRE*GAEEIL
Trigger: CAGGATCTCCTCTGCCCCCAACTCCCTGCGCCTAGA...CAACATCCAGTTTCTCACAGACTTTCTAAGACGGTCTGTACCAGCCAGGATATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp AAGGCAAGTCGGGCAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGATCTTGCACAGTGGCATaGGGCCACACAGTCACTCGC +
Preference number: 5 (lower is better)
Translates to: KASRAGQESQMSLYCLYRSCTVA*GHTVTR
Trigger: GCGAGTGACTGTGTGGCCCAATGCCACTGTGCAAGA...TCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTGCCCGACTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp AAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGTCTTGCACAGTGGCATaGGGCCACACAGTCACTCGC +
Preference number: 5 (lower is better)
Translates to: KRESDLVMDGCEPPCGCWSCTVA*GHTVTR
Trigger: GCGAGTGACTGTGTGGCCCAATGCCACTGTGCAAGA...CCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp CAGGTCAGGAAAGCCAGATGTCTCTGTACTGCTTATACAGAGGTAGGCAGGATCTCTGGCACCAAGGAGTaGTTGCCCGCCCTTGTACCA +
Preference number: 5 (lower is better)
Translates to: QVRKARCLCTAYTEVGRISGTKE*LPALVP
Trigger: TGGTACAAGGGCGGGCAACAACTCCTTGGTGCCAGA...GATCCTGCCTACCTCTGTATAAGCAGTACAGAGACATCTGGCTTTCCTGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp TCCAGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTAGTTCCAGGGACGTGTaGGCCTTGCCCAATGGGCTG +
Preference number: 5 (lower is better)
Translates to: SRRGSQILLWMVVSHHVVSSRDV*ALPNGL
Trigger: CAGCCCATTGGGCAAGGCCAACACGTCCCTGGAACT...AACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS CCA 90 bp CTAGCCTCACACAGGTACACGCCCTCATCCTCTAATACAGGCTTCTaGATCTCCACGTGCAGTGAGTTGGAGGTTCTGCTGACTTTTGTG +
Preference number: 5 (lower is better)
Translates to: LASHRYTPSSSNTGF*ISTCSELEVLLTFV
Trigger: CACAAAAGTCAGCAGAACCTCCAACTCACTGCACGTGGAGATCCAGAAGCCTGTATTAGAGGATGAGGGCGTGTACCTGTGTGAGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp CTAGACAACCGCCATCGTCAATCTTTATGTATTATACTGAACCCCACTCCCACCCCACTGCAGGCTGACTaGCTTCTCCTGCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: LDNRHRQSLCIILNPTPTPLQAD*LLLQAQ
Trigger: CTGTGCCTGCAGGAGAAGCAAGTCAGCCTGCAGTGG...GGTGGGAGTGGGGTTCAGTATAATACATAAAGATTGACGATGGCGGTTGTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CAA 90 bp ACTCTTCCTTCTCCCTGTAGGGTCCATGGGCACTGCAGTTACCTGAGCTTCATAAGCCCATATCATTTGTaGCTTGGCAGGTGTAGGCCC +
Preference number: 5 (lower is better)
Translates to: TLPSPCRVHGHCSYLSFISPYHL*LGRCRP
Trigger: GGGCCTACACCTGCCAAGCAACAAATGATATGGGCT...TATGAAGCTCAGGTAACTGCAGTGCCCATGGACCCTACAGGGAGAAGGAAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTTCTGGCACCAAGGAGTaGTTGCCCGCCCTTGTACCA +
Preference number: 5 (lower is better)
Translates to: RRGSQILLWMVVSHHVVASGTKE*LPALVP
Trigger: TGGTACAAGGGCGGGCAACAACTCCTTGGTGCCAGA...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTAAGCCCTGCACATTCTaGGGACTGGAGACACCCCAT +
Preference number: 5 (lower is better)
Translates to: RRGSQILLWMVVSHHVVAKPCTF*GLETPH
Trigger: ATGGGGTGTCTCCAGTCCCAAGAATGTGCAGGGCTT...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCACATCTAACCAGCGGTaGCTATCACTGATCTCAAAG +
Preference number: 5 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCTSNQR*LSLISK
Trigger: CTTTGAGATCAGTGATAGCAACCGCTGGTTAGATGT...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp GATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGTGACCGTGGTGCCTTaGACATCTAACCAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: DLVMDGCEPPCGCWDLNSVTVVP*TSNQRL
Trigger: CAACCGCTGGTTAGATGTCAAAGGCACCACGGTCAC...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAACAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp TCACCTGCTTTGCCTCATCCCATTCCCAGGTGCCCTCCAGATATTATACCACCTCATATCATTTGTTGCTaGGCAGGTGTAGGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: SPALPHPIPRCPPDIIPPHIICC*AGVGPR
Trigger: TCTGGGGCCTACACCTGCCAAGCAACAAATGATATG...AGGTGGTATAATATCTGGAGGGCACCTGGGAATGGGATGAGGCAAAGCAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CAA 90 bp ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCCCTGCGGGGTTCATTTaGACTTCAGCCATAAAAACA +
Preference number: 5 (lower is better)
Translates to: TMWLLGFELLTFGRAVGCPAGFI*TSAIKT
Trigger: TGTTTTTATGGCTGAAGTCAAAATGAACCCCGCAGG...GCACCCGACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTAACAGCTCCCACACCTaGATGGCAGAGAAGTGGCCA +
Preference number: 5 (lower is better)
Translates to: RRGSQILLWMVVSHHVVANSSHT*MAEKWP
Trigger: TGGCCACTTCTCTGCCATCAAGGTGTGGGAGCTGTT...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp ACTGATATCCTGGCTGGTACAGACCGTCTTAGAAAGTCTGTGAGAAACTGGATGGTGACCGTGGTGCCTTaGACATCTAACCAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: TDILAGTDRLRKSVRNWMVTVVP*TSNQRL
Trigger: CAACCGCTGGTTAGATGTCAAAGGCACCACGGTCAC...CATCCAGTTTCTCACAGACTTTCTAAGACGGTCTGTACCAGCCAGGATATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTAGCCCATATCATTTGTaGCTTGGCAGGTGTAGGCCC +
Preference number: 5 (lower is better)
Translates to: RRGSQILLWMVVSHHVVASPYHL*LGRCRP
Trigger: GGGCCTACACCTGCCAAGCAACAAATGATATGGGCT...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp AGTCACCTGCTTTGCCTCATCCCATTCCCAGGTGCCCTCCAGATATTATACCACACATCTAACCAGCGGTaGCTATCACTGATCTCAAAG +
Preference number: 5 (lower is better)
Translates to: SHLLCLIPFPGALQILYHTSNQR*LSLISK
Trigger: CTTTGAGATCAGTGATAGCAACCGCTGGTTAGATGT...GTGGTATAATATCTGGAGGGCACCTGGGAATGGGATGAGGCAAAGCAGGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CAA 90 bp CTAGACAACCGCCATCGTCAATCTTTATGTATTATACTGAACCCCACTCCCACCAGCCCATATCATTTGTaGCTTGGCAGGTGTAGGCCC +
Preference number: 5 (lower is better)
Translates to: LDNRHRQSLCIILNPTPTSPYHL*LGRCRP
Trigger: GGGCCTACACCTGCCAAGCAACAAATGATATGGGCT...GGTGGGAGTGGGGTTCAGTATAATACATAAAGATTGACGATGGCGGTTGTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS-3UTR CAA 90 bp AGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTGCTTCCACGTGCAGTGAGTaGGAGGTTCTGCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: RRGSQILLWMVVSHHVVASTCSE*EVLLTF
Trigger: AAAAGTCAGCAGAACCTCCAACTCACTGCACGTGGA...AGCAACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp GGAGGGAAAACTAAGACCCTGTCATGCTGTGGTCACTGTATTGAGTCTCTGTTAGCTAGCACCTTGCCATaGTGGGATAGGACCATCTCA +
Preference number: 5 (lower is better)
Translates to: GGKTKTLSCCGHCIESLLASTLP*WDRTIS
Trigger: TGAGATGGTCCTATCCCACAATGGCAAGGTGCTAGC...TAACAGAGACTCAATACAGTGACCACAGCATGACAGGGTCTTAGTTTTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp TCCAGAAGAGGGAGTCAGATCTTGTTATGGATGGTTGTGAGCCACCATGTGGTTTATGAAGCCCTTGCTTaGTGCAGAGGAAAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: SRRGSQILLWMVVSHHVVYEALA*CRGKGL
Trigger: CAGGCCTTTTCCTCTGCACAAAGCAAGGGCTTCATA...AACCACATGGTGGCTCACAACCATCCATAACAAGATCTGACTCCCTCTTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS-3UTR CAA 90 bp CCATTTTTCTTAGGATCAAGAGGCTTGGAAGGCAAGTCGGGCAGGTCAGGAAAGACATCTAACCAGCGGTaGCTATCACTGATCTCAAAG +
Preference number: 5 (lower is better)
Translates to: PFFLGSRGLEGKSGRSGKTSNQR*LSLISK
Trigger: CTTTGAGATCAGTGATAGCAACCGCTGGTTAGATGT...CTTTCCTGACCTGCCCGACTTGCCTTCCAAGCCTCTTGATCCTAAGAAAAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp TTCATAATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCCCACTGCAGGCTGACTaGCTTCTCCTGCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: FIIKGNTWGMEKIKQEGFPLQAD*LLLQAQ
Trigger: CTGTGCCTGCAGGAGAAGCAAGTCAGCCTGCAGTGG...GAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp CCATTTTTCTTAGGATCAAGAGGCTTGGAAGGCAAGTCGGGCAGGTCAGGAAAGCCTGCGGGGTTCATTTaGACTTCAGCCATAAAAACA +
Preference number: 5 (lower is better)
Translates to: PFFLGSRGLEGKSGRSGKPAGFI*TSAIKT
Trigger: TGTTTTTATGGCTGAAGTCAAAATGAACCCCGCAGG...CTTTCCTGACCTGCCCGACTTGCCTTCCAAGCCTCTTGATCCTAAGAAAAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp TTCATAATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCAACAGCTCCCACACCTaGATGGCAGAGAAGTGGCCA +
Preference number: 5 (lower is better)
Translates to: FIIKGNTWGMEKIKQEGFNSSHT*MAEKWP
Trigger: TGGCCACTTCTCTGCCATCAAGGTGTGGGAGCTGTT...GAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS-3UTR CAA 90 bp TTCATAATCAAAGGCAACACTTGGGGAATGGAGAAAATCAAGCAAGAAGGATTCTCCACGTGCAGTGAGTaGGAGGTTCTGCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: FIIKGNTWGMEKIKQEGFSTCSE*EVLLTF
Trigger: AAAAGTCAGCAGAACCTCCAACTCACTGCACGTGGA...GAATCCTTCTTGCTTGATTTTCTCCATTCCCCAAGTGTTGCCTTTGATTATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS CCA 72 bp GCATGGAGGACATCCAGGGTCACGGGTCTGGAGAGATaGGGTGCGTGGCCGGGGAGCCCCACACCACAGCGG +
Preference number: 6 (lower is better)
Translates to: AWRTSRVTGLER*GAWPGSPTPQR
Trigger: CCGCTGTGGTGTGGGGCTCCCCGGCCACGCACCCCATCTCTCCAGACCCGTGACCCTGGATGTCCTCCATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp AGACGCCAGTGGGCTCGAGGCTCTGGAAGCTGGAGGTaGCAGAGTGGGTGGGGTCCTGGCCTCGCCACTGCA +
Preference number: 6 (lower is better)
Translates to: RRQWARGSGSWR*QSGWGPGLATA
Trigger: TGCAGTGGCGAGGCCAGGACCCCACCCACTCTGTCACCTCCAGCTTCCAGAGCCTCGAGCCCACTGGCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS TCA 72 bp CAGAGTGGGTGGGGTCCTGGCCTCGCCACTGCAGGCTaGCTTGCTTCTCCTGCAGGCACAGGTAGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: QSGWGPGLATAG*LASPAGTGRVW
Trigger: CCACACCCTACCTGTGCCTGCAGGAGAAGCAAGTCAGCCTGCAGTGGCGAGGCCAGGACCCCACCCACTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS CCA 72 bp AGGGAGTTGGCTGTGGCCTTGGCCTGGATCCTGCCATaGGAGGGACGCTGGGGTTCCAAGTTGGTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: RELAVALAWILP*EGRWGSKLVAR
Trigger: CCTGGCCACCAACTTGGAACCCCAGCGTCCCTCCCATGGCAGGATCCAGGCCAAGGCCACAGCCAACTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp ACAGTGGCATTGGGCCACACAGTCACTCGCACAGCCTaGGCATCGAAGTCAGCTGCAGCCGAGGCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: TVALGHTVTRTA*ASKSAAAEAWP
Trigger: GGGCCAGGCCTCGGCTGCAGCTGACTTCGATGCCCAGGCTGTGCGAGTGACTGTGTGGCCCAATGCCACTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp GGACCACAGGAGCCGAGAGCTGAGCCCCATCCTCGGTaGGGAGGCGGCAGGCATAGACAGCAGCATCAGTTC +
Preference number: 6 (lower is better)
Translates to: GPQEPRAEPHPR*GGGRHRQQHQF
Trigger: GAACTGATGCTGCTGTCTATGCCTGCCGCCTCCTCACCGAGGATGGGGCTCAGCTCTCGGCTCCTGTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 72 bp AGAAGCGAGTGTCAGGAGCTGGGCTCAGGCCACTCCTaGAGCTCAGGGTCACCGCCTGCCCTTCCACAACCT +
Preference number: 6 (lower is better)
Translates to: RSECQELGSGHS*SSGSPPALPQP
Trigger: AGGTTGTGGAAGGGCAGGCGGTGACCCTGAGCTGCAGGAGTGGCCTGAGCCCAGCTCCTGACACTCGCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 72 bp CACAGTCACTCGCACAGCCTGGGCATCGAAGTCAGCTaGAGCCGAGGCCTGGCCCAGTGTGTTGCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: HSHSHSLGIEVS*SRGLAQCVAGF
Trigger: GAAGCCAGCAACACACTGGGCCAGGCCTCGGCTGCAGCTGACTTCGATGCCCAGGCTGTGCGAGTGACTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp TCCGTTCAGGTACCAGGAGAAGCGAGTGTCAGGAGCTaGGCTCAGGCCACTCCTGCAGCTCAGGGTCACCGC +
Preference number: 6 (lower is better)
Translates to: SVQVPGEASVRS*AQATPAAQGHR
Trigger: GCGGTGACCCTGAGCTGCAGGAGTGGCCTGAGCCCAGCTCCTGACACTCGCTTCTCCTGGTACCTGAACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 72 bp AGTCGGTGGCGATTCCAGAACCACGTGAAGGAAGAGTaGCCCGTGGGCCCAGAGCCACCAGGGAGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: SRWRFQNHVKEE*PVGPEPPGRRQ
Trigger: CTGCCTCCTCCCTGGTGGCTCTGGGCCCACGGGCAACTCTTCCTTCACGTGGTTCTGGAATCGCCACCGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 90 bp CCAGAGTCCACAAGACCTAGTTCTCGGACCTCTAGCTGCAGGGAGTaGGCTGTGGCCTTGGCCTGGATCCTGCCATGGGAGGGACGCTGG +
Preference number: 6 (lower is better)
Translates to: PESTRPSSRTSSCRE*AVALAWILPWEGRW
Trigger: CCAGCGTCCCTCCCATGGCAGGATCCAGGCCAAGGCCACAGCCAACTCCCTGCAGCTAGAGGTCCGAGAACTAGGTCTTGTGGACTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp GCTGGTGTTGGGGCCAGCCTGCGTCCTACAGTAGTATaGGCCCGCATCAGTGCTGGAAGCCGCAGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: AGVGASLRPTVV*ARISAGSRRKQ
Trigger: CTGCTTCCTGCGGCTTCCAGCACTGATGCGGGCTCATACTACTGTAGGACGCAGGCTGGCCCCAACACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp CGGATGAGAGGGCAGCAGGGTCCTCGCAGGTCACTGTaGCAGGCTCTCCCTCGGGTACACTACCAGAGGGAT +
Preference number: 6 (lower is better)
Translates to: RMRGQQGPRRSL*QALPRVHYQRD
Trigger: ATCCCTCTGGTAGTGTACCCGAGGGAGAGCCTGTCACAGTGACCTGCGAGGACCCTGCTGCCCTCTCATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 72 bp CAGCCTGCGTCCTACAGTAGTATGAGCCCGCATCAGTaGTGGAAGCCGCAGGAAGCAGGAGGCTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: QPASYSSMSPHQ*WKPQEAGGCCW
Trigger: CCAGCAGCAGCCTCCTGCTTCCTGCGGCTTCCAGCACTGATGCGGGCTCATACTACTGTAGGACGCAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 72 bp GACTATCCACCGTACACAGTACCAGGGCCAGCTGCCTaGCCTGGGTCTCTAGGAGGTAGGTCAGCCGCAGGT +
Preference number: 6 (lower is better)
Translates to: DYPPYTVPGPAA*PGSLGGRSAAG
Trigger: ACCTGCGGCTGACCTACCTCCTAGAGACCCAGGGCAGGCAGCTGGCCCTGGTACTGTGTACGGTGGATAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 72 bp TGGCCAGGGGCTCACTGTCCACTCGACAGTCGAGGATaGCCTGGTGGCCACCCTGAGGCTCCACAAACACTA +
Preference number: 6 (lower is better)
Translates to: WPGAHCPLDSRG*PGGHPEAPQTL
Trigger: TAGTGTTTGTGGAGCCTCAGGGTGGCCACCAGGGCATCCTCGACTGTCGAGTGGACAGTGAGCCCCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS CCA 72 bp GCGCCCAATGAGAACTGGCAGAGCAGGGTCCGACCGTaGTCCTGCCAGGATAGGGCCATATGTAGGGTCGTC +
Preference number: 6 (lower is better)
Translates to: APNENWQSRVRP*SCQDRAICRVV
Trigger: GACGACCCTACATATGGCCCTATCCTGGCAGGACCACGGTCGGACCCTGCTCTGCCAGTTCTCATTGGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS CCA 72 bp TCCTGCCATGGGAGGGACGCTGGGGTTCCAAGTTGGTaGCCAGGAGATGGTCCCCACGGAACAGAGACAGGT +
Preference number: 6 (lower is better)
Translates to: SCHGRDAGVPSW*PGDGPHGTETG
Trigger: ACCTGTCTCTGTTCCGTGGGGACCATCTCCTGGCCACCAACTTGGAACCCCAGCGTCCCTCCCATGGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp TGCGCTGGAGGGTCACTTTGTACACTGCACACCAGGTaGCCTAGTCGCTCAGGGTCCGTGCTCAGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: CAGGSLCTLHTR*PSRSGSVLSRA
Trigger: TGCCCTGCTGAGCACGGACCCTGAGCGACTAGGCCACCTGGTGTGCAGTGTACAAAGTGACCCTCCAGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp AGCAGGTCAGGTTCACCTGCTGCCCCTCTTGCACAGTaGCATTGGGCCACACAGTCACTCGCACAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: SRSGSPAAPLAQ*HWATQSLAQPG
Trigger: CCCAGGCTGTGCGAGTGACTGTGTGGCCCAATGCCACTGTGCAAGAGGGGCAGCAGGTGAACCTGACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 72 bp GTCAGGTTCACCTGCTGCCCCTCTTGCACAGTGGCATaGGGCCACACAGTCACTCGCACAGCCTGGGCATCG +
Preference number: 6 (lower is better)
Translates to: VRFTCCPSCTVA*GHTVTRTAWAS
Trigger: CGATGCCCAGGCTGTGCGAGTGACTGTGTGGCCCAATGCCACTGTGCAAGAGGGGCAGCAGGTGAACCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 90 bp ACACGGCCATGTGGCCCTGACCCACATCTAGGAGGGCTGACAGCTTaGGAGGGTCTGGGGCATACAGCACACTTAGGACCACAGGAGCCG +
Preference number: 6 (lower is better)
Translates to: TRPCGPDPHLGGLTA*EGLGHTAHLGPQEP
Trigger: CGGCTCCTGTGGTCCTAAGTGTGCTGTATGCCCCAGACCCTCCAAAGCTGTCAGCCCTCCTAGATGTGGGTCAGGGCCACATGGCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp CTGGATCCCCGGGAAGGATGTTCCTCCCTGAGGAGCTaGGGAGGATCTCCACACCTTTGGGGGCATGTGGCA +
Preference number: 6 (lower is better)
Translates to: LDPREGCSSLRS*GGSPHLWGHVA
Trigger: TGCCACATGCCCCCAAAGGTGTGGAGATCCTCCTCAGCTCCTCAGGGAGGAACATCCTTCCCGGGGATCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS TCA 72 bp TTCTCCAGAGTTGGAGGCCAACGTGAGGCCTCCGTGTaGCAGCACCACAGTAGCCAGGGGCTCACTGACCAC +
Preference number: 6 (lower is better)
Translates to: FSRVGGQREASV*QHHSSQGLTDH
Trigger: GTGGTCAGTGAGCCCCTGGCTACTGTGGTGCTGTCACACGGAGGCCTCACGTTGGCCTCCAACTCTGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp AGTGGTACAGCCCAGCCTGAGCCCGGACCACAGGGGTaGAGGAGAGTGTGGGCACAGGAGCTGAATGTAGTC +
Preference number: 6 (lower is better)
Translates to: SGTAQPEPGPQG*RRVWAQELNVV
Trigger: GACTACATTCAGCTCCTGTGCCCACACTCTCCTTCACCCCTGTGGTCCGGGCTCAGGCTGGGCTGTACCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 72 bp ACAGTTGCAGCTGCGCTGGAGGGTCACTTTGTACACTaGACACCAGGTGGCCTAGTCGCTCAGGGTCCGTGC +
Preference number: 6 (lower is better)
Translates to: TVAAALEGHFVH*TPGGLVAQGPC
Trigger: GCACGGACCCTGAGCGACTAGGCCACCTGGTGTGCAGTGTACAAAGTGACCCTCCAGCGCAGCTGCAACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 72 bp ATCTGCAGGCGCAGCTCATTGGGGAGCACAGTCACATaGAGCCGGGGATTACTGCCTGCCAATTCGTCCGCG +
Preference number: 6 (lower is better)
Translates to: ICRRSSLGSTVT*SRGLLPANSSA
Trigger: CGCGGACGAATTGGCAGGCAGTAATCCCCGGCTGCATGTGACTGTGCTCCCCAATGAGCTGCGCCTGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 72 bp CGAAGTCAGCTGCAGCCGAGGCCTGGCCCAGTGTGTTaGTGGCTTCGCATGTATAGGTCCCGTCATCCTCCA +
Preference number: 6 (lower is better)
Translates to: RSQLQPRPGPVC*WLRMYRSRHPP
Trigger: TGGAGGATGACGGGACCTATACATGCGAAGCCAGCAACACACTGGGCCAGGCCTCGGCTGCAGCTGACTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp CCTGCGTCCTACAGTAGTATGAGCCCGCATCAGTGCTaGAAGCCGCAGGAAGCAGGAGGCTGCTGCTGGATC +
Preference number: 6 (lower is better)
Translates to: PASYSSMSPHQC*KPQEAGGCCWI
Trigger: GATCCAGCAGCAGCCTCCTGCTTCCTGCGGCTTCCAGCACTGATGCGGGCTCATACTACTGTAGGACGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp GTGGCCACAACATGGCCTTTGTGGAGAAGCCGTAGCTaGGCTGGGGGATCGCTGTCTACGTGGCACAAGAGG +
Preference number: 6 (lower is better)
Translates to: VATTWPLWRSRS*AGGSLSTWHKR
Trigger: CCTCTTGTGCCACGTAGACAGCGATCCCCCAGCCCAGCTACGGCTTCTCCACAAAGGCCATGTTGTGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp GCCACAGGCTGCAGCCTCACAGTCTCCAGTGATCCCTaGGTCCACAGCACTCCATTCCGGAACCAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: ATGCSLTVSSDP*VHSTPFRNQEK
Trigger: CTTCTCCTGGTTCCGGAATGGAGTGCTGTGGACCCAGGGATCACTGGAGACTGTGAGGCTGCAGCCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp TCAGGTTCACCTGCTGCCCCTCTTGCACAGTGGCATTaGGCCACACAGTCACTCGCACAGCCTGGGCATCGA +
Preference number: 6 (lower is better)
Translates to: SGSPAAPLAQWH*ATQSLAQPGHR
Trigger: TCGATGCCCAGGCTGTGCGAGTGACTGTGTGGCCCAATGCCACTGTGCAAGAGGGGCAGCAGGTGAACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp GCAGCCTCTGGAACAGCTGCAGTTGGTGCAGAGCTCTaGTCCCAAAGTAGGCAGAGGCTGAGGCAGAGCCCA +
Preference number: 6 (lower is better)
Translates to: AASGTAAVGAEL*SQSRQRLRQSP
Trigger: TGGGCTCTGCCTCAGCCTCTGCCTACTTTGGGACCAGAGCTCTGCACCAACTGCAGCTGTTCCAGAGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS CAA 90 bp ACCAAGCAGGTCAGGTTCACCTGCTGCCCCTCTTGCACAGTGGCATaGGGCCACACAGTCACTCGCACAGCCTGGGCATCGAAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: TKQVRFTCCPSCTVA*GHTVTRTAWASKSA
Trigger: AGCTGACTTCGATGCCCAGGCTGTGCGAGTGACTGTGTGGCCCAATGCCACTGTGCAAGAGGGGCAGCAGGTGAACCTGACCTGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp CTGTCCACAGTGCAGATGAACACGGCCATGTGGCCCTaGCCCACATCTAGGAGGGCTGACAGCTTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: LSTVQMNTAMWP*PTSRRADSFGG
Trigger: CCCTCCAAAGCTGTCAGCCCTCCTAGATGTGGGTCAGGGCCACATGGCCGTGTTCATCTGCACTGTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp GCGCCTTGTAGGGTAGAGGCCACGAGGCGATTCCGGTaGAACAGTTGCAGCTGCGCTGGAGGGTCACTTTGT +
Preference number: 6 (lower is better)
Translates to: APCRVEATRRFR*NSCSCAGGSLC
Trigger: ACAAAGTGACCCTCCAGCGCAGCTGCAACTGTTTCACCGGAATCGCCTCGTGGCCTCTACCCTACAAGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp CCAATGGCCATTGTGAAACCAGGCATAGAGGGCGGATaGGAGGGCAGCAGGGTCCTCGCAGGTCACTGTGAC +
Preference number: 6 (lower is better)
Translates to: PMAIVKPGIEGG*EGSRVLAGHCD
Trigger: GTCACAGTGACCTGCGAGGACCCTGCTGCCCTCTCATCCGCCCTCTATGCCTGGTTTCACAATGGCCATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp ACCAGCGTGAGCCCGTGTAGTCACCAGGAACTGGAGTaGGGAAGCCGGTCCCTCCTGAAGCCAATGGCCATT +
Preference number: 6 (lower is better)
Translates to: TSVSPCSHQELE*GSRSLLKPMAI
Trigger: AATGGCCATTGGCTTCAGGAGGGACCGGCTTCCTCACTCCAGTTCCTGGTGACTACACGGGCTCACGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp GCTACCTGGATGTGGCCTATCCCTGATGCTGAGCTGTaGCGCTCGTGGCTGGCAGCTAGCACCTTGCCATTG +
Preference number: 6 (lower is better)
Translates to: ATWMWPIPDAEL*RSWLAASTLPL
Trigger: CAATGGCAAGGTGCTAGCTGCCAGCCACGAGCGTCACAGCTCAGCATCAGGGATAGGCCACATCCAGGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp GGTTGGAGGCTACTAGTTGACTGCCCCGGTGAAGAGTaGGGATGGCCAGGGGCTCACTGTCCACTCGACAGT +
Preference number: 6 (lower is better)
Translates to: GWRLLVDCPGEE*GWPGAHCPLDS
Trigger: ACTGTCGAGTGGACAGTGAGCCCCTGGCCATCCTCACTCTTCACCGGGGCAGTCAACTAGTAGCCTCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS GCA 72 bp CACCTTCCAGCAGAAGTTCCAGGGACGTGTTGGCCTTaGCCAATGGGCTGTGGGCAGAGCAGCTATAGAGCC +
Preference number: 6 (lower is better)
Translates to: HLPAEVPGTCWP*PMGCGQSSYRA
Trigger: GGCTCTATAGCTGCTCTGCCCACAGCCCATTGGGCAAGGCCAACACGTCCCTGGAACTTCTGCTGGAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 72 bp CTGAGCTGTGACGCTCGTGGCTGGCAGCTAGCACCTTaGCATTGTGGGATAGGACCATCTCAGCAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: LSCDARGWQLAP*HCGIGPSQQVA
Trigger: AGCCACCTGCTGAGATGGTCCTATCCCACAATGGCAAGGTGCTAGCTGCCAGCCACGAGCGTCACAGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp ACCTCTTTCCGACTACTGTGTGCGCCCAATGAGAACTaGCAGAGCAGGGTCCGACCGTGGTCCTGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: TSFRLLCAPNEN*QSRVRPWSCQD
Trigger: ATCCTGGCAGGACCACGGTCGGACCCTGCTCTGCCAGTTCTCATTGGGCGCACACAGTAGTCGGAAAGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS CCA 72 bp GTCCGTGCTCAGCAGGGCACTGAGTGTAACATGACGTaGGGTATAGGACACATGGAGGCTGACAGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: VRAQQGTECNMT*GIGHMEADRGS
Trigger: GCTGCCCCTGTCAGCCTCCATGTGTCCTATACCCCACGTCATGTTACACTCAGTGCCCTGCTGAGCACGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp CACGAGGCGATTCCGGTGAAACAGTTGCAGCTGCGCTaGAGGGTCACTTTGTACACTGCACACCAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: HEAIPVKQLQLR*RVTLYTAHQVA
Trigger: GGCCACCTGGTGTGCAGTGTACAAAGTGACCCTCCAGCGCAGCTGCAACTGTTTCACCGGAATCGCCTCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp GGCCTATCCCTGATGCTGAGCTGTGACGCTCGTGGCTaGCAGCTAGCACCTTGCCATTGTGGGATAGGACCA +
Preference number: 6 (lower is better)
Translates to: GLSLMLSCDARG*QLAPCHCGIGP
Trigger: TGGTCCTATCCCACAATGGCAAGGTGCTAGCTGCCAGCCACGAGCGTCACAGCTCAGCATCAGGGATAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 72 bp GCTGGCTGCAAGTCTCGGATTTCTAGGCGCAGGGAGTaGGGGGCAGAGGAGATCCTGAATCGGGGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: AGCKSRISRRRE*GAEEILNRGLK
Trigger: CTTCAACCCCCGATTCAGGATCTCCTCTGCCCCCAACTCCCTGCGCCTAGAAATCCGAGACTTGCAGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 72 bp CTAGGGCCGAGCTCCTCTATGTCCACTCTCAAGGCATaGGGAGGAGCAGTGACTCGGATGTGGGGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LGPSSSMSTLKA*GGAVTRMWGLV
Trigger: CACCAAGCCCCACATCCGAGTCACTGCTCCTCCCAATGCCTTGAGAGTGGACATAGAGGAGCTCGGCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS CAA 90 bp CCGTCATCCTCCAGCTCTGGAAAGTGGATCTGCAGGCGCAGCTCATaGGGGAGCACAGTCACATGCAGCCGGGGATTACTGCCTGCCAAT +
Preference number: 6 (lower is better)
Translates to: PSSSSSGKWICRRSS*GSTVTCSRGLLPAN
Trigger: ATTGGCAGGCAGTAATCCCCGGCTGCATGTGACTGTGCTCCCCAATGAGCTGCGCCTGCAGATCCACTTTCCAGAGCTGGAGGATGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 90 bp GCTGAATGTAGTCGGTGGCGATTCCAGAACCACGTGAAGGAAGAGTaGCCCGTGGGCCCAGAGCCACCAGGGAGGAGGCAGCTTAAGTTC +
Preference number: 6 (lower is better)
Translates to: AECSRWRFQNHVKEE*PVGPEPPGRRQLKF
Trigger: GAACTTAAGCTGCCTCCTCCCTGGTGGCTCTGGGCCCACGGGCAACTCTTCCTTCACGTGGTTCTGGAATCGCCACCGACTACATTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp GCCGCTTGCCCGAGTAGTCATAGTACCAGATGGCTGTaGTGCCATTGGACACTGGGACATCGGCAGGGTAGC +
Preference number: 6 (lower is better)
Translates to: AACPSSHSTRWL*CHWTLGHRQGS
Trigger: GCTACCCTGCCGATGTCCCAGTGTCCAATGGCATCACAGCCATCTGGTACTATGACTACTCGGGCAAGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS TCA 72 bp CAGGTAAACCTCTTTCCGACTACTGTGTGCGCCCAATaGGAACTGGCAGAGCAGGGTCCGACCGTGGTCCTG +
Preference number: 6 (lower is better)
Translates to: QVNLFPTTVCAQ*ELAEQGPTVVL
Trigger: CAGGACCACGGTCGGACCCTGCTCTGCCAGTTCTCATTGGGCGCACACAGTAGTCGGAAAGAGGTTTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS TCA 72 bp TTGGCAGGTGTAGGCCCCAGAATCATTCCAGGCTGCTaGGAACAGCCGAAGCACATGTCCCGTGACTCCGAG +
Preference number: 6 (lower is better)
Translates to: LAGVGPRIIPGC*EQPKHMSRDSE
Trigger: CTCGGAGTCACGGGACATGTGCTTCGGCTGTTCTCAGCAGCCTGGAATGATTCTGGGGCCTACACCTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS TCA 72 bp ACAGGTGAGCCAGGGGATAGCTGTCCACAGTGCAGATaGACACGGCCATGTGGCCCTGACCCACATCTAGGA +
Preference number: 6 (lower is better)
Translates to: TGEPGDSCPQCR*TRPCGPDPHLG
Trigger: TCCTAGATGTGGGTCAGGGCCACATGGCCGTGTTCATCTGCACTGTGGACAGCTATCCCCTGGCTCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp CAAGGAGTTGTTGCCCGCCCTTGTACCATGTGTAGCTaGGTGAGTCCTGGTGGGTGCTCCACACCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: QGVVARPCTMCS*VSPGGCSTPSR
Trigger: CCTGCTTGGTGTGGAGCACCCACCAGGACTCACTCAGCTACACATGGTACAAGGGCGGGCAACAACTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp CACGGTGCACTGAATCACGACCATGAGCCTGGTCCTTaGGTCTCGAAAGGAAGACAGGACAGCATCCCGGGG +
Preference number: 6 (lower is better)
Translates to: HGALNHDHEPGP*VSKGRQDSIPG
Trigger: CCCCGGGATGCTGTCCTGTCTTCCTTTCGAGACTCAAGGACCAGGCTCATGGTCGTGATTCAGTGCACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 72 bp ATGCAGGGAATGAGCAGGCAGGATCCCGACAAGCCCTaGACATTCTTGGGACTGGAGACACCCCATGTGGTC +
Preference number: 6 (lower is better)
Translates to: MQGMSRQDPDKP*TFLGLETPHVV
Trigger: GACCACATGGGGTGTCTCCAGTCCCAAGAATGTGCAGGGCTTGTCGGGATCCTGCCTGCTCATTCCCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS GCA 72 bp CATCAGTGCTGGAAGCCGCAGGAAGCAGGAGGCTGCTaGTGGATCCTTCCAGAAGTAGAGCTCCGTTCAGGT +
Preference number: 6 (lower is better)
Translates to: HQCWKPQEAGGC*WILPEVELRSG
Trigger: ACCTGAACGGAGCTCTACTTCTGGAAGGATCCAGCAGCAGCCTCCTGCTTCCTGCGGCTTCCAGCACTGATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp AGCCCTGCACATTCTTGGGACTGGAGACACCCCATGTaGTCTGGCCTAGTGAGAAGACAGAGGCCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: SPAHSWDWRHPM*SGLVRRQRPAG
Trigger: TCCTGCTGGCCTCTGTCTTCTCACTAGGCCAGACCACATGGGGTGTCTCCAGTCCCAAGAATGTGCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS CCA 72 bp GGCAGGATCCCGACAAGCCCTGCACATTCTTGGGACTaGAGACACCCCATGTGGTCTGGCCTAGTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: GRIPTSPAHSWD*RHPMWSGLVRR
Trigger: TCTTCTCACTAGGCCAGACCACATGGGGTGTCTCCAGTCCCAAGAATGTGCAGGGCTTGTCGGGATCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS CCA 72 bp GGCTTCGCATGTATAGGTCCCGTCATCCTCCAGCTCTaGAAAGTGGATCTGCAGGCGCAGCTCATTGGGGAG +
Preference number: 6 (lower is better)
Translates to: GFACIGPVILQL*KVDLQAQLIGE
Trigger: CTCCCCAATGAGCTGCGCCTGCAGATCCACTTTCCAGAGCTGGAGGATGACGGGACCTATACATGCGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp CAGCAGAAGTTCCAGGGACGTGTTGGCCTTGCCCAATaGGCTGTGGGCAGAGCAGCTATAGAGCCCCTCATT +
Preference number: 6 (lower is better)
Translates to: QQKFQGRVGLAQ*AVGRAAIEPLI
Trigger: AATGAGGGGCTCTATAGCTGCTCTGCCCACAGCCCATTGGGCAAGGCCAACACGTCCCTGGAACTTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 72 bp ATGAGCAGGCAGGATCCCGACAAGCCCTGCACATTCTaGGGACTGGAGACACCCCATGTGGTCTGGCCTAGT +
Preference number: 6 (lower is better)
Translates to: MSRQDPDKPCTF*GLETPHVVWPS
Trigger: ACTAGGCCAGACCACATGGGGTGTCTCCAGTCCCAAGAATGTGCAGGGCTTGTCGGGATCCTGCCTGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS CAA 72 bp TGGGTCCACAGCACTCCATTCCGGAACCAGGAGAAGTaGGCAGGGCTGACAGCAACCTCCTGGTTCACGTTG +
Preference number: 6 (lower is better)
Translates to: WVHSTPFRNQEK*AGLTATSWFTL
Trigger: CAACGTGAACCAGGAGGTTGCTGTCAGCCCTGCCAACTTCTCCTGGTTCCGGAATGGAGTGCTGTGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 72 bp TGTGGCCCTGACCCACATCTAGGAGGGCTGACAGCTTaGGAGGGTCTGGGGCATACAGCACACTTAGGACCA +
Preference number: 6 (lower is better)
Translates to: CGPDPHLGGLTA*EGLGHTAHLGP
Trigger: TGGTCCTAAGTGTGCTGTATGCCCCAGACCCTCCAAAGCTGTCAGCCCTCCTAGATGTGGGTCAGGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 90 bp ATGCAGGGAATGAGCAGGCAGGATCCCGACAAGCCCTGCACATTCTaGGGACTGGAGACACCCCATGTGGTCTGGCCTAGTGAGAAGACA +
Preference number: 6 (lower is better)
Translates to: MQGMSRQDPDKPCTF*GLETPHVVWPSEKT
Trigger: TGTCTTCTCACTAGGCCAGACCACATGGGGTGTCTCCAGTCCCAAGAATGTGCAGGGCTTGTCGGGATCCTGCCTGCTCATTCCCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS CAA 90 bp AGTGATCCCTGGGTCCACAGCACTCCATTCCGGAACCAGGAGAAGTaGGCAGGGCTGACAGCAACCTCCTGGTTCACGTTGCAAGTTAGG +
Preference number: 6 (lower is better)
Translates to: SDPWVHSTPFRNQEK*AGLTATSWFTLQVR
Trigger: CCTAACTTGCAACGTGAACCAGGAGGTTGCTGTCAGCCCTGCCAACTTCTCCTGGTTCCGGAATGGAGTGCTGTGGACCCAGGGATCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp CTTCAGTTGAGGAGGCTACAAGCTGGTCACCATGGCTaGGAGTTAGCTGGGCAGGTGGACGACTATCCACCG +
Preference number: 6 (lower is better)
Translates to: LQLRRLQAGHHG*ELAGQVDDYPP
Trigger: CGGTGGATAGTCGTCCACCTGCCCAGCTAACTCTCAGCCATGGTGACCAGCTTGTAGCCTCCTCAACTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp CCCAGAGTGTTGGAGGCAGTGCACACATACTCCCCTTaGTTGCTAGGGCCGAGCTCCTCTATGTCCACTCTC +
Preference number: 6 (lower is better)
Translates to: PRVLEAVHTYSP*LLGPSSSMSTL
Trigger: GAGAGTGGACATAGAGGAGCTCGGCCCTAGCAATCAAGGGGAGTATGTGTGCACTGCCTCCAACACTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS GCA 72 bp ACAGCTAAGCATGTGTACTCTCCGCTGTCTGCTGGCTaGAAGTCTCGGATTTCTAGGCGCAGGGAGTTGGGG +
Preference number: 6 (lower is better)
Translates to: TAKHVYSPLSAG*KSRISRRRELG
Trigger: CCCCAACTCCCTGCGCCTAGAAATCCGAGACTTGCAGCCAGCAGACAGCGGAGAGTACACATGCTTAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp GAGGCTTCAGTTGAGGAGGCTACAAGCTGGTCACCATaGCTGAGAGTTAGCTGGGCAGGTGGACGACTATCC +
Preference number: 6 (lower is better)
Translates to: EASVEEATSWSP*LRVSWAGGRLS
Trigger: GGATAGTCGTCCACCTGCCCAGCTAACTCTCAGCCATGGTGACCAGCTTGTAGCCTCCTCAACTGAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 72 bp GAGGAGGATCTCCACACCTTTGGGGGCATGTGGCACTaGCAGGTAAACCTCTTTCCGACTACTGTGTGCGCC +
Preference number: 6 (lower is better)
Translates to: EEDLHTFGGMWH*QVNLFPTTVCA
Trigger: GGCGCACACAGTAGTCGGAAAGAGGTTTACCTGCAAGTGCCACATGCCCCCAAAGGTGTGGAGATCCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS CAA 72 bp GTCTGGGGCCTGAGCTTGGCAATGGTAGGCACCAGCTaGCCTCAGACTTATGGCTGCAATGCGGAGTGTAGA +
Preference number: 6 (lower is better)
Translates to: VWGLSLAMVGTS*PQTYGCNAECR
Trigger: TCTACACTCCGCATTGCAGCCATAAGTCTGAGGCAAGCTGGTGCCTACCATTGCCAAGCTCAGGCCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 72 bp GCCCAGAGTGTTGGAGGCAGTGCACACATACTCCCCTaGATTGCTAGGGCCGAGCTCCTCTATGTCCACTCT +
Preference number: 6 (lower is better)
Translates to: AQSVGGSAHILP*IARAELLYVHS
Trigger: AGAGTGGACATAGAGGAGCTCGGCCCTAGCAATCAAGGGGAGTATGTGTGCACTGCCTCCAACACTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10
CDS TCA 72 bp GCACTTCACAGAAGTAGAAGCCAGTATCAGCCCTGGTaGCTGCAGGCAGGTGCAAGGTTGAGGCATGGGCAT +
Preference number: 6 (lower is better)
Translates to: ALHRSRSQYQPW*LQAGARLRHGH
Trigger: ATGCCCATGCCTCAACCTTGCACCTGCCTGCAGTCACCAGGGCTGATACTGGCTTCTACTTCTGTGAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp TCTGGATCTCCACGTGCAGTGAGTTGGAGGTTCTGCTaGCTTTTGTGCGCTGGGAACAGCTCCCACACCTTG +
Preference number: 6 (lower is better)
Translates to: SGSPRAVSWRFC*LLCAGNSSHTL
Trigger: CAAGGTGTGGGAGCTGTTCCCAGCGCACAAAAGTCAGCAGAACCTCCAACTCACTGCACGTGGAGATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp GCACTCCATTCCGGAACCAGGAGAAGTTGGCAGGGCTaGCAGCAACCTCCTGGTTCACGTTGCAAGTTAGGT +
Preference number: 6 (lower is better)
Translates to: ALHSGTRRSWQG*QQPPGSRCKLG
Trigger: ACCTAACTTGCAACGTGAACCAGGAGGTTGCTGTCAGCCCTGCCAACTTCTCCTGGTTCCGGAATGGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS GCA 72 bp AGCTATAGCGGAGCTCCTGGGGAGCCTCCTTCGGCGTaGTACAGAGCAGAGTCACTGTCTCATTTTCCAAGA +
Preference number: 6 (lower is better)
Translates to: SYSGAPGEPPSA*YRAESLSHFPR
Trigger: TCTTGGAAAATGAGACAGTGACTCTGCTCTGTAGCACGCCGAAGGAGGCTCCCCAGGAGCTCCGCTATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp GGAGCTGAGGAGGATCTCCACACCTTTGGGGGCATGTaGCACTTGCAGGTAAACCTCTTTCCGACTACTGTG +
Preference number: 6 (lower is better)
Translates to: GAEEDLHTFGGM*HLQVNLFPTTV
Trigger: CACAGTAGTCGGAAAGAGGTTTACCTGCAAGTGCCACATGCCCCCAAAGGTGTGGAGATCCTCCTCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS CCA 72 bp TGTCTCCAGGAAGGTGGTCAGGTCTGGAGTAAGGGGTaGATATCTGACCACCACACTCAATGGACTGGAGCG +
Preference number: 6 (lower is better)
Translates to: CLQEGGQVWSKG*ISDHHTQWTGA
Trigger: CGCTCCAGTCCATTGAGTGTGGTGGTCAGATATCCACCCCTTACTCCAGACCTGACCACCTTCCTGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp AAGTCCGGCCTGTGTCTCCAGGAAGGTGGTCAGGTCTaGAGTAAGGGGTGGATATCTGACCACCACACTCAA +
Preference number: 6 (lower is better)
Translates to: KSGLCLQEGGQV*SKGWISDHHTQ
Trigger: TTGAGTGTGGTGGTCAGATATCCACCCCTTACTCCAGACCTGACCACCTTCCTGGAGACACAGGCCGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp AACCAGGAGAAGTTGGCAGGGCTGACAGCAACCTCCTaGTTCACGTTGCAAGTTAGGTTGGCCTCTGTGCCT +
Preference number: 6 (lower is better)
Translates to: NQEKLAGLTATS*FTLQVRLASVP
Trigger: AGGCACAGAGGCCAACCTAACTTGCAACGTGAACCAGGAGGTTGCTGTCAGCCCTGCCAACTTCTCCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 72 bp TTGAAAGAGGCTGCGGCTGAGGAGTTGCCCAATGTGTaGCTAGCCTCACACAGGTACACGCCCTCATCCTCT +
Preference number: 6 (lower is better)
Translates to: LKEAAAEELPNV*LASHRYTPSSS
Trigger: AGAGGATGAGGGCGTGTACCTGTGTGAGGCTAGCAACACATTGGGCAACTCCTCAGCCGCAGCCTCTTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 72 bp GTGGCCTTAGCATTGAAAGAGGCTGCGGCTGAGGAGTaGCCCAATGTGTTGCTAGCCTCACACAGGTACACG +
Preference number: 6 (lower is better)
Translates to: VALALKEAAAEE*PNVLLASHRYT
Trigger: CGTGTACCTGTGTGAGGCTAGCAACACATTGGGCAACTCCTCAGCCGCAGCCTCTTTCAATGCTAAGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 90 bp GCCTTAGCATTGAAAGAGGCTGCGGCTGAGGAGTTGCCCAATGTGTaGCTAGCCTCACACAGGTACACGCCCTCATCCTCTAATACAGGC +
Preference number: 6 (lower is better)
Translates to: ALALKEAAAEELPNV*LASHRYTPSSSNTG
Trigger: GCCTGTATTAGAGGATGAGGGCGTGTACCTGTGTGAGGCTAGCAACACATTGGGCAACTCCTCAGCCGCAGCCTCTTTCAATGCTAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 90 bp TTGGCAGGGCTGACAGCAACCTCCTGGTTCACGTTGCAAGTTAGGTaGGCCTCTGTGCCTTCACGCAGTGTATTTGACGGTGTGATGACC +
Preference number: 6 (lower is better)
Translates to: LAGLTATSWFTLQVR*ASVPSRSVFDGVMT
Trigger: GGTCATCACACCGTCAAATACACTGCGTGAAGGCACAGAGGCCAACCTAACTTGCAACGTGAACCAGGAGGTTGCTGTCAGCCCTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp CAGTACAGTGGCCTTAGCATTGAAAGAGGCTGCGGCTaGGGAGTTGCCCAATGTGTTGCTAGCCTCACACAG +
Preference number: 6 (lower is better)
Translates to: QYSGLSIERGCG*GVAQCVASLTQ
Trigger: CTGTGTGAGGCTAGCAACACATTGGGCAACTCCTCAGCCGCAGCCTCTTTCAATGCTAAGGCCACTGTACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp TGCAGTGAGTTGGAGGTTCTGCTGACTTTTGTGCGCTaGGAACAGCTCCCACACCTTGATGGCAGAGAAGTG +
Preference number: 6 (lower is better)
Translates to: CSELEVLLTFVR*EQLPHLDGREV
Trigger: CACTTCTCTGCCATCAAGGTGTGGGAGCTGTTCCCAGCGCACAAAAGTCAGCAGAACCTCCAACTCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 72 bp GGGCTGGGATCCGTTGTCACAGTGACCGTGGTGCCTTaGACATCTAACCAGCGGTTGCTATCACTGATCTCA +
Preference number: 6 (lower is better)
Translates to: GLGSVVTVTVVP*TSNQRLLSLIS
Trigger: TGAGATCAGTGATAGCAACCGCTGGTTAGATGTCAAAGGCACCACGGTCACTGTGACAACGGATCCCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS CAA 90 bp AACCAGGAGAAGTTGGCAGGGCTGACAGCAACCTCCTGGTTCACGTaGCAAGTTAGGTTGGCCTCTGTGCCTTCACGCAGTGTATTTGAC +
Preference number: 6 (lower is better)
Translates to: NQEKLAGLTATSWFT*QVRLASVPSRSVFD
Trigger: GTCAAATACACTGCGTGAAGGCACAGAGGCCAACCTAACTTGCAACGTGAACCAGGAGGTTGCTGTCAGCCCTGCCAACTTCTCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp CCTATGAAGCCCTTGCTTTGTGCAGAGGAAAAGGCCTaGTACGGACCAGTGAGATGCAGAGACAGACACAGG +
Preference number: 6 (lower is better)
Translates to: PMKPLLCAEEKA*YGPVRCRDRHR
Trigger: CCTGTGTCTGTCTCTGCATCTCACTGGTCCGTATCAGGCCTTTTCCTCTGCACAAAGCAAGGGCTTCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS CCA 72 bp GTCATAGTACCAGATGGCTGTGATGCCATTGGACACTaGGACATCGGCAGGGTAGCTGAAGATGCAGGGAAT +
Preference number: 6 (lower is better)
Translates to: VIVPDGCDAIGH*DIGRVAEDAGN
Trigger: ATTCCCTGCATCTTCAGCTACCCTGCCGATGTCCCAGTGTCCAATGGCATCACAGCCATCTGGTACTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028794.10
ENSMUST00000110226.2
ENSMUST00000110227.8
CDS CAA 72 bp TTTGACGGTGTGATGACCAGTACAGTGGCCTTAGCATaGAAAGAGGCTGCGGCTGAGGAGTTGCCCAATGTG +
Preference number: 6 (lower is better)
Translates to: FDGVMTSTVALA*KEAAAEELPNV
Trigger: CACATTGGGCAACTCCTCAGCCGCAGCCTCTTTCAATGCTAAGGCCACTGTACTGGTCATCACACCGTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CAA 72 bp CTGACAGCAACCTCCTGGTTCACGTTGCAAGTTAGGTaGGCCTCTGTGCCTTCACGCAGTGTATTTGACGGT +
Preference number: 6 (lower is better)
Translates to: LTATSWFTLQVR*ASVPSRSVFDG
Trigger: ACCGTCAAATACACTGCGTGAAGGCACAGAGGCCAACCTAACTTGCAACGTGAACCAGGAGGTTGCTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp GTATATCAGTCTCCGTCAGAAGCCTCTGGGTGGTACTaGTGGAGCCCAGTGTATTCTGGGCTGTGCAAACAT +
Preference number: 6 (lower is better)
Translates to: VYQSPSEASGWY*WSPVYSGLCKH
Trigger: ATGTTTGCACAGCCCAGAATACACTGGGCTCCATCAGTACCACCCAGAGGCTTCTGACGGAGACTGATATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS TCA 72 bp CCAGGACTCACTAAAAACATGGAGGCTGAGCGGGGATaGCACCAGAGAGCCCATATCATTTGTTGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: PGLTKNMEAERG*HQRAHIICCLA
Trigger: TGCCAAGCAACAAATGATATGGGCTCTCTGGTGTCATCCCCGCTCAGCCTCCATGTTTTTAGTGAGTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110226.2
CDS GCA 72 bp TGTCCTGAGACCCTTACCTATGAAGCCCTTGCTTTGTaGAGAGGAAAAGGCCTGATACGGACCAGTGAGATG +
Preference number: 6 (lower is better)
Translates to: CPETLTYEALAL*RGKGLIRTSEM
Trigger: CATCTCACTGGTCCGTATCAGGCCTTTTCCTCTGCACAAAGCAAGGGCTTCATAGGTAAGGGTCTCAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS TCA 72 bp GACTTCAGCCATAAAAACATGGAGGCTGAGCGGGGATaGCACCAGAGAGCCCATATCATTTGTTGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: DFSHKNMEAERG*HQRAHIICCLA
Trigger: TGCCAAGCAACAAATGATATGGGCTCTCTGGTGTCATCCCCGCTCAGCCTCCATGTTTTTATGGCTGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp AGAAGAGTGAACTGTTGGCTGACCCAAGAATATTGGTaGCTTCACAGTGGTAGTTTCCAGAGTCCACAAGAC +
Preference number: 6 (lower is better)
Translates to: RRVNCWLTQEYW*LHSGSFQSPQD
Trigger: GTCTTGTGGACTCTGGAAACTACCACTGTGAAGCCACCAATATTCTTGGGTCAGCCAACAGTTCACTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028794.10
ENSMUST00000110227.8
CDS CCA 72 bp AGAGTATCCTCCATTTCAAAGCTGGGTACCCAAGCATaGATACAAACCACATACAACCAGCCAGTGAGGATG +
Preference number: 6 (lower is better)
Translates to: RVSSISKLGTQA*IQTTYNQPVRM
Trigger: CATCCTCACTGGCTGGTTGTATGTGGTTTGTATCCATGCTTGGGTACCCAGCTTTGAAATGGAGGATACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110227.8
CDS TCA 72 bp CTCCTGGATAGTATTTTTCTTAGTGGCCATCTCTGCTaGATTCTCATCCTCATTCAGCTTGGTAGAACTCTT +
Preference number: 6 (lower is better)
Translates to: LLDSIFLSGHLC*ILILIQLGRTL
Trigger: AAGAGTTCTACCAAGCTGAATGAGGATGAGAATTCAGCAGAGATGGCCACTAAGAAAAATACTATCCAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028794.10