Pregenerated sensors for SIGIRR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025494Ensembl transcript IDs: ENSMUST00000097958.3, ENSMUST00000209199.2, ENSMUST00000209294.2, ENSMUST00000209887.2, ENSMUST00000210167.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGGAGCCAGGCTTCCAAAGCACCAGGGTCACGAGGTGGCGGTGCTaGCGCAGGAGCCGGAGAGCAGGGTGTATGGGCTCACGCCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: TEPGFQSTRVTRWRC*RRSRRAGCMGSRLW Trigger: CCAGAGGCGTGAGCCCATACACCCTGCTCTCCGGCTCCTGCGCCAGCACCGCCACCTCGTGACCCTGGTGCTTTGGAAGCCTGGCTCCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| 3UTR CCA 90 bp | GAAGGAGTCACGGAGCCAGGCTTCCAAAGCACCAGGGTCACGAGGTaGCGGTGCTGGCGCAGGAGCCGGAGAGCAGGGTGTATGGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: EGVTEPGFQSTRVTR*RCWRRSRRAGCMGS Trigger: TGAGCCCATACACCCTGCTCTCCGGCTCCTGCGCCAGCACCGCCACCTCGTGACCCTGGTGCTTTGGAAGCCTGGCTCCGTGACTCCTTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| 3UTR CCA 90 bp | CTGCGGGTGAGCTCCAGTAGGCGGCACAGTCCCTCCCGGAAGCTCTaGCTACACCAGGGCCGGCTTAGGAAGGCATCTGAAAGAACCACG | + |
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Preference number: 1 (lower is better) Translates to: LRVSSSRRHSPSRKL*LHQGRLRKASERTT Trigger: CGTGGTTCTTTCAGATGCCTTCCTAAGCCGGCCCTGGTGTAGCCAGAGCTTCCGGGAGGGACTGTGCCGCCTACTGGAGCTCACCCGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| 3UTR CCA 90 bp | TGCTGGCGCAGGAGCCGGAGAGCAGGGTGTATGGGCTCACGCCTCTaGCCCTCAAAGGTGATGAAGATAGGTCTGCGGGTGAGCTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: CWRRSRRAGCMGSRL*PSKVMKIGLRVSSS Trigger: ACTGGAGCTCACCCGCAGACCTATCTTCATCACCTTTGAGGGCCAGAGGCGTGAGCCCATACACCCTGCTCTCCGGCTCCTGCGCCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| 3UTR GCA 90 bp | GGCCCAGGGATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCTaGTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: GPGIEARVVILGRSA*CLYPGSCHRDLMVW Trigger: CCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCTTGCCTCTATCCCTGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| 3UTR CCA 90 bp | GCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTaGGCTGCTGGGATATGGGCTACACATCATCCTCAGACACGAGGC | + |
|
Preference number: 1 (lower is better) Translates to: ACCLYPGSCHRDLMV*AAGIWATHHPQTRG Trigger: GCCTCGTGTCTGAGGATGATGTGTAGCCCATATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR TCA 90 bp | CCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTaGTCTCATGGTCTGGGCTGCTGGGATATGGGCTACACATCATCC | + |
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Preference number: 1 (lower is better) Translates to: PRKECLLPLPWKLPP*SHGLGCWDMGYTSS Trigger: GGATGATGTGTAGCCCATATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR TCA 90 bp | GGCTACACCAGGGCCGGCTTAGGAAGGCATCTGAAAGAACCACGATaGGACGCCGACAGCGACTCAGGTTCACCAAAAGGTCGGCAGAGG | + |
|
Preference number: 1 (lower is better) Translates to: GYTRAGLGRHLKEPR*DADSDSGSPKGRQR Trigger: CCTCTGCCGACCTTTTGGTGAACCTGAGTCGCTGTCGGCGTCTCATCGTGGTTCTTTCAGATGCCTTCCTAAGCCGGCCCTGGTGTAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| 3UTR CCA 90 bp | TTCACTGCCGTGGCTCTCTCCTATGCAGATCCTGGTTTCCTGCAGTaGAGTTGGTGGCTCCCCAAAGACAGGTCCACGGACACCTGCAGG | + |
|
Preference number: 1 (lower is better) Translates to: FTAVALSYADPGFLQ*SWWLPKDRSTDTCR Trigger: CCTGCAGGTGTCCGTGGACCTGTCTTTGGGGAGCCACCAACTCCACTGCAGGAAACCAGGATCTGCATAGGAGAGAGCCACGGCAGTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR CCA 90 bp | GGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATaGTCTGGGCTGCTGGGATATGGGCTACACATCATCCTCAGACAC | + |
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Preference number: 1 (lower is better) Translates to: GVPAASTLEAATVIS*SGLLGYGLHIILRH Trigger: GTGTCTGAGGATGATGTGTAGCCCATATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR GCA 90 bp | TCCATTTCACTGCCGTGGCTCTCTCCTATGCAGATCCTGGTTTCCTaGAGTGGAGTTGGTGGCTCCCCAAAGACAGGTCCACGGACACCT | + |
|
Preference number: 1 (lower is better) Translates to: SISLPWLSPMQILVS*SGVGGSPKTGPRTP Trigger: AGGTGTCCGTGGACCTGTCTTTGGGGAGCCACCAACTCCACTGCAGGAAACCAGGATCTGCATAGGAGAGAGCCACGGCAGTGAAATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR CCA 90 bp | GTGGCTCTCTCCTATGCAGATCCTGGTTTCCTGCAGTGGAGTTGGTaGCTCCCCAAAGACAGGTCCACGGACACCTGCAGGATACCACAA | + |
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Preference number: 1 (lower is better) Translates to: VALSYADPGFLQWSW*LPKDRSTDTCRIPQ Trigger: TTGTGGTATCCTGCAGGTGTCCGTGGACCTGTCTTTGGGGAGCCACCAACTCCACTGCAGGAAACCAGGATCTGCATAGGAGAGAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR CCA 90 bp | CCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGATATaGGCTACACATCATCCTCAGACACGAGGCAGTAGAAGTCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: PGSCHRDLMVWAAGI*ATHHPQTRGSRSLS Trigger: GGACAGACTTCTACTGCCTCGTGTCTGAGGATGATGTGTAGCCCATATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR GCA 90 bp | GTGCACTGTAGTTTCGAGAGCCGAGGTCAGAGACATCCATTTCACTaGCGTGGCTCTCTCCTATGCAGATCCTGGTTTCCTGCAGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: VHCSFESRGQRHPFH*RGSLLCRSWFPAVE Trigger: CTCCACTGCAGGAAACCAGGATCTGCATAGGAGAGAGCCACGGCAGTGAAATGGATGTCTCTGACCTCGGCTCTCGAAACTACAGTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR GCA 90 bp | GGGCTACACATCATCCTCAGACACGAGGCAGTAGAAGTCTGTCCGTaGACTGTAGTTTCGAGAGCCGAGGTCAGAGACATCCATTTCACT | + |
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Preference number: 1 (lower is better) Translates to: GLHIILRHEAVEVCP*TVVSRAEVRDIHFT Trigger: AGTGAAATGGATGTCTCTGACCTCGGCTCTCGAAACTACAGTGCACGGACAGACTTCTACTGCCTCGTGTCTGAGGATGATGTGTAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCACGCCTCTGGCCCTCAAAGGTGATGAAGATAGGTCTGCGGGTGAGCTCCCCCTCCCGGAAGCTCTaGCTACACCAGGGCCGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: GSRLWPSKVMKIGLRVSSPSRKL*LHQGRL Trigger: AAGCCGGCCCTGGTGTAGCCAGAGCTTCCGGGAGGG...GGAGCTCACCCGCAGACCTATCTTCATCACCTTTGAGGGCCAGAGGCGTGAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGCAGTGGAGTTGGTaGCTCCCCAAAGACAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: VPAASTLEAATVISWSGLLQWSW*LPKDRS Trigger: GGACCTGTCTTTGGGGAGCCACCAACTCCACTGCAG...CAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGATCCTAGGAAGGAGTaGCTGCTGCCTCTACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: EGVPAASTLEAATVISWSDPRKE*LLPLPW Trigger: CCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATC...AGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGGTAGAAGTCTGTCCGTaGACTGTAGTTTCGAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: VPAASTLEAATVISWSGLVEVCP*TVVSRA Trigger: GGCTCTCGAAACTACAGTGCACGGACAGACTTCTAC...CAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTCATCCTGAAGTCGGGTTTGAGGGTCTCCCTCCACCGGCCTGTACTGCAATGGGCTCACGCCTCTaGCCCTCAAAGGTGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: LCHPEVGFEGLPPPACTAMGSRL*PSKVMK Trigger: CTTCATCACCTTTGAGGGCCAGAGGCGTGAGCCCAT...TGCAGTACAGGCCGGTGGAGGGAGACCCTCAAACCCGACTTCAGGATGACAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| 3UTR-3UTR GCA 90 bp | ACTAGGATCTGTGACCAGAGGGGGTTACTGTATGCTCACCCATCAGCCACAAAGGGAAGGAGTGCCTGCTaGCTCTACCCTGGAAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: TRICDQRGLLYAHPSATKGRSAC*LYPGSC Trigger: GCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCC...CTTTGTGGCTGATGGGTGAGCATACAGTAACCCCCTCTGGTCACAGATCCTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR-3UTR GCA 90 bp | ACTAGGATCTGTGACCAGAGGGGGTTACTGTATGCTCACCCATCAGCCACAAAGGATCCTAGGAAGGAGTaGCTGCTGCCTCTACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TRICDQRGLLYAHPSATKDPRKE*LLPLPW Trigger: CCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATC...CTTTGTGGCTGATGGGTGAGCATACAGTAACCCCCTCTGGTCACAGATCCTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR GCA 72 bp | CCAGGCTTCCAAAGCACCAGGGTCACGAGGTGGCGGTaGTGGCGCAGGAGCCGGAGAGCAGGGTGTATGGGC | + |
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Preference number: 3 (lower is better) Translates to: PGFQSTRVTRWR*WRRSRRAGCMG Trigger: GCCCATACACCCTGCTCTCCGGCTCCTGCGCCAGCACCGCCACCTCGTGACCCTGGTGCTTTGGAAGCCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| 3UTR CCA 72 bp | AGCTCCAGTAGGCGGCACAGTCCCTCCCGGAAGCTCTaGCTACACCAGGGCCGGCTTAGGAAGGCATCTGAA | + |
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Preference number: 3 (lower is better) Translates to: SSSRRHSPSRKL*LHQGRLRKASE Trigger: TTCAGATGCCTTCCTAAGCCGGCCCTGGTGTAGCCAGAGCTTCCGGGAGGGACTGTGCCGCCTACTGGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| 3UTR TCA 72 bp | GAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTaGTCTCATGGTCTGGGCTGCTGGGATATGGGCTAC | + |
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Preference number: 3 (lower is better) Translates to: ECLLPLPWKLPP*SHGLGCWDMGY Trigger: GTAGCCCATATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR CCA 72 bp | AGGAGCCGGAGAGCAGGGTGTATGGGCTCACGCCTCTaGCCCTCAAAGGTGATGAAGATAGGTCTGCGGGTG | + |
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Preference number: 3 (lower is better) Translates to: RSRRAGCMGSRL*PSKVMKIGLRV Trigger: CACCCGCAGACCTATCTTCATCACCTTTGAGGGCCAGAGGCGTGAGCCCATACACCCTGCTCTCCGGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| 3UTR GCA 72 bp | CTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTaGCACCGTGATCTCATGGTCTGGGCTGCTGGGATA | + |
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Preference number: 3 (lower is better) Translates to: LGRSACCLYPGS*HRDLMVWAAGI Trigger: TATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCTACACCAGGGCCGGCTTAGGAAGGCATCTGAAAGAACCACGATGAGACGCTCCTCTAGGAAGAGTTaGTATCCCCGACGCCGCTCC | + |
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Preference number: 3 (lower is better) Translates to: WLHQGRLRKASERTTMRRSSRKS*YPRRRS Trigger: GGAGCGGCGTCGGGGATACAAACTCTTCCTAGAGGA...GCGTCTCATCGTGGTTCTTTCAGATGCCTTCCTAAGCCGGCCCTGGTGTAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| 3UTR GCA 72 bp | CTGCCGTGGCTCTCTCCTATGCAGATCCTGGTTTCCTaGAGTGGAGTTGGTGGCTCCCCAAAGACAGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: LPWLSPMQILVS*SGVGGSPKTGP Trigger: TGGACCTGTCTTTGGGGAGCCACCAACTCCACTGCAGGAAACCAGGATCTGCATAGGAGAGAGCCACGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR CCA 72 bp | TCCTATGCAGATCCTGGTTTCCTGCAGTGGAGTTGGTaGCTCCCCAAAGACAGGTCCACGGACACCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SYADPGFLQWSW*LPKDRSTDTCR Trigger: CCTGCAGGTGTCCGTGGACCTGTCTTTGGGGAGCCACCAACTCCACTGCAGGAAACCAGGATCTGCATAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR CCA 72 bp | GTGGCTCTCTCCTATGCAGATCCTGGTTTCCTGCAGTaGAGTTGGTGGCTCCCCAAAGACAGGTCCACGGAC | + |
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Preference number: 3 (lower is better) Translates to: VALSYADPGFLQ*SWWLPKDRSTD Trigger: GTCCGTGGACCTGTCTTTGGGGAGCCACCAACTCCACTGCAGGAAACCAGGATCTGCATAGGAGAGAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR CCA 72 bp | GCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATaGTCTGGGCTGCTGGGATATGGGCTACACATCATC | + |
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Preference number: 3 (lower is better) Translates to: AASTLEAATVIS*SGLLGYGLHII Trigger: GATGATGTGTAGCCCATATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR TCA 72 bp | ACAGGTCCACGGACACCTGCAGGATACCACAAGGCCTaGGGCTCCAAGATCGACAGCCAGTCTTCTACTAGG | + |
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Preference number: 3 (lower is better) Translates to: TGPRTPAGYHKA*GSKIDSQSSTR Trigger: CCTAGTAGAAGACTGGCTGTCGATCTTGGAGCCTCAGGCCTTGTGGTATCCTGCAGGTGTCCGTGGACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR GCA 72 bp | ATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCTaGTGCCTCTACCCTGGAAGCTGCCACCGTGATCTC | + |
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Preference number: 3 (lower is better) Translates to: IEARVVILGRSA*CLYPGSCHRDL Trigger: GAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCTTGCCTCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| 3UTR TCA 72 bp | AGGGCCGGCTTAGGAAGGCATCTGAAAGAACCACGATaGGACGCCGACAGCGACTCAGGTTCACCAAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: RAGLGRHLKEPR*DADSDSGSPKG Trigger: ACCTTTTGGTGAACCTGAGTCGCTGTCGGCGTCTCATCGTGGTTCTTTCAGATGCCTTCCTAAGCCGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| 3UTR GCA 72 bp | CAGAGACATCCATTTCACTGCCGTGGCTCTCTCCTATaGAGATCCTGGTTTCCTGCAGTGGAGTTGGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: QRHPFHCRGSLL*RSWFPAVELVA Trigger: AGCCACCAACTCCACTGCAGGAAACCAGGATCTGCATAGGAGAGAGCCACGGCAGTGAAATGGATGTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR GCA 72 bp | AGTTTCGAGAGCCGAGGTCAGAGACATCCATTTCACTaGCGTGGCTCTCTCCTATGCAGATCCTGGTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: SFESRGQRHPFH*RGSLLCRSWFP Trigger: AGGAAACCAGGATCTGCATAGGAGAGAGCCACGGCAGTGAAATGGATGTCTCTGACCTCGGCTCTCGAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| 3UTR GCA 72 bp | ATCATCCTCAGACACGAGGCAGTAGAAGTCTGTCCGTaGACTGTAGTTTCGAGAGCCGAGGTCAGAGACATC | + |
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Preference number: 3 (lower is better) Translates to: IILRHEAVEVCP*TVVSRAEVRDI Trigger: GATGTCTCTGACCTCGGCTCTCGAAACTACAGTGCACGGACAGACTTCTACTGCCTCGTGTCTGAGGATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| CDS-3UTR CCA 90 bp | GGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGCCCTCCCGGAAGCTCTaGCTACACCAGGGCCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GCDPRKECLLPLPWKLPPPSRKL*LHQGRL Trigger: AAGCCGGCCCTGGTGTAGCCAGAGCTTCCGGGAGGG...CGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CCA 90 bp | GCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCCCTCCCGGAAGCTCTaGCTACACCAGGGCCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: ARVVILGRSACCLYPGSCPSRKL*LHQGRL Trigger: AAGCCGGCCCTGGTGTAGCCAGAGCTTCCGGGAGGG...GCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CCA 90 bp | GCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGATATCCCTCCCGGAAGCTCTaGCTACACCAGGGCCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: ASTLEAATVISWSGLLGYPSRKL*LHQGRL Trigger: AAGCCGGCCCTGGTGTAGCCAGAGCTTCCGGGAGGG...ATATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR TCA 90 bp | AGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTTTTCAGCCACTGCACTaGTGGCTGGGGACACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SACCLYPGSCHRDLMVWAFQPLH*WLGTLG Trigger: CCCCAGTGTCCCCAGCCATCAGTGCAGTGGCTGAAA...AGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CCA 90 bp | GGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGCACTGCACTGATGGCTaGGGACACTGGGGCCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: GCDPRKECLLPLPWKLPPHCTDG*GHWGLE Trigger: CTCTAGGCCCCAGTGTCCCCAGCCATCAGTGCAGTG...CGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CCA 90 bp | TGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGCTGCAGTGGAGTTGGTaGCTCCCCAAAGACAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: CCLYPGSCHRDLMVWAAGLQWSW*LPKDRS Trigger: GGACCTGTCTTTGGGGAGCCACCAACTCCACTGCAG...CCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
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| CDS-3UTR TCA 90 bp | AGGGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACTTTCAGCCACTGCACTaGTGGCTGGGGACACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RVVILGRSACCLYPGSCHFQPLH*WLGTLG Trigger: CCCCAGTGTCCCCAGCCATCAGTGCAGTGGCTGAAA...GTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR TCA 90 bp | GCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGATATTTTCAGCCACTGCACTaGTGGCTGGGGACACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ASTLEAATVISWSGLLGYFQPLH*WLGTLG Trigger: CCCCAGTGTCCCCAGCCATCAGTGCAGTGGCTGAAA...ATATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR TCA 90 bp | GGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGAGAGTCCTCCAAGCCTaGGTCCTTTCCAGGACGCTG | + |
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Preference number: 4 (lower is better) Translates to: GCDPRKECLLPLPWKLPPRVLQA*VLSRTL Trigger: CAGCGTCCTGGAAAGGACTCAGGCTTGGAGGACTCT...CGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| CDS-3UTR GCA 90 bp | GCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCGAGGGAAGCCAGTACTaGAGCCACATGGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARVVILGRSACCLYPGSCEGSQY*SHMASR Trigger: CCTGCTGGCCATGTGGCTGCAGTACTGGCTTCCCTC...GCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACGAGGGAAGCCAGTACTaGAGCCACATGGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVVILGRSACCLYPGSCHEGSQY*SHMASR Trigger: CCTGCTGGCCATGTGGCTGCAGTACTGGCTTCCCTC...GTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGTCCACGGACACCTGCAGGATACCACAAGGCCTGAGGCTCCAAGATCGAGAGGGAAGCCAGTACTaGAGCCACATGGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DRSTDTCRIPQGLRLQDREGSQY*SHMASR Trigger: CCTGCTGGCCATGTGGCTGCAGTACTGGCTTCCCTC...TCGATCTTGGAGCCTCAGGCCTTGTGGTATCCTGCAGGTGTCCGTGGACCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGGCAAGACCCAAGGCCTaGTCTTCAGATGGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPAASTLEAATVISWSGLARPKA*SSDGER Trigger: CCTTTCCCCATCTGAAGACCAGGCCTTGGGTCTTGC...CAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGATACACTGCACTGATGGCTaGGGACACTGGGGCCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLYPGSCHRDLMVWAAGIHCTDG*GHWGLE Trigger: CTCTAGGCCCCAGTGTCCCCAGCCATCAGTGCAGTG...TATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGGGCCCAGGGATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGAGTCCTCATGGAGGCTaGAGTGGCTTCCATTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEGPRDRGKGCDPRKECLSPHGG*SGFHCP Trigger: TGGGCAATGGAAGCCACTTCAGCCTCCATGAGGACT...CAGGCACTCCTTCCTAGGATCACAACCCTTGCCTCTATCCCTGGGCCCCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGGGGCCCAGGGATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGCCCATCTTTCAGCCACTaGACTGATGGCTGGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LRGPGIEARVVILGRSACPSFSH*TDGWGH Trigger: GTGTCCCCAGCCATCAGTGCAGTGGCTGAAAGATGG...GCAGGCACTCCTTCCTAGGATCACAACCCTTGCCTCTATCCCTGGGCCCCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | CTTTGTCATCCTGAAGTCGGGTTTGAGGGTCTCCCTCCACCGGCCTGTACTGCAGAGGGAAGCCAGTACTaGAGCCACATGGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCHPEVGFEGLPPPACTAEGSQY*SHMASR Trigger: CCTGCTGGCCATGTGGCTGCAGTACTGGCTTCCCTC...TGCAGTACAGGCCGGTGGAGGGAGACCCTCAAACCCGACTTCAGGATGACAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
||
| CDS-3UTR CCA 90 bp | GTCCACGGACACCTGCAGGATACCACAAGGCCTGAGGCTCCAAGATCGACAGCCGCAAGACCCAAGGCCTaGTCTTCAGATGGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHGHLQDTTRPEAPRSTAARPKA*SSDGER Trigger: CCTTTCCCCATCTGAAGACCAGGCCTTGGGTCTTGC...GGCTGTCGATCTTGGAGCCTCAGGCCTTGTGGTATCCTGCAGGTGTCCGTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | GGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGATGGGCTCACGCCTCTaGCCCTCAAAGGTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GCDPRKECLLPLPWKLPPMGSRL*PSKVMK Trigger: CTTCATCACCTTTGAGGGCCAGAGGCGTGAGCCCAT...CGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGATAAGTCCTCATGGAGGCTaGAGTGGCTTCCATTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLYPGSCHRDLMVWAAGISPHGG*SGFHCP Trigger: TGGGCAATGGAAGCCACTTCAGCCTCCATGAGGACT...TATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGTCAAAGCAACTTCTCTaGCAAGGGCAAGACCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPAASTLEAATVISWSGLSKQLL*QGQDPR Trigger: CCTTGGGTCTTGCCCTTGGCAGAGAAGTTGCTTTGA...CAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGATATCCATCTTTCAGCCACTaGACTGATGGCTGGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: ASTLEAATVISWSGLLGYPSFSH*TDGWGH Trigger: GTGTCCCCAGCCATCAGTGCAGTGGCTGAAAGATGG...ATATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGATACCATCTTTCAGCCACTaGACTGATGGCTGGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: CLYPGSCHRDLMVWAAGIPSFSH*TDGWGH Trigger: GTGTCCCCAGCCATCAGTGCAGTGGCTGAAAGATGG...TATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCAGATCCTGGTTTCCTaGAGTGGAGTTGGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARVVILGRSACCLYPGSCQILVS*SGVGGS Trigger: GGAGCCACCAACTCCACTGCAGGAAACCAGGATCTG...GCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCAGATCCTGGTTTCCTaGAGTGGAGTTGGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVVILGRSACCLYPGSCHQILVS*SGVGGS Trigger: GGAGCCACCAACTCCACTGCAGGAAACCAGGATCTG...GTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGATAGCAAGACCCAAGGCCTaGTCTTCAGATGGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLYPGSCHRDLMVWAAGIARPKA*SSDGER Trigger: CCTTTCCCCATCTGAAGACCAGGCCTTGGGTCTTGC...TATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTACCCAGAAGTCCTCATaGAGGCTGAAGTGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SACCLYPGSCHRDLMVWATQKSS*RLKWLP Trigger: TGGAAGCCACTTCAGCCTCCATGAGGACTTCTGGGT...AGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTATGGGCTCACGCCTCTaGCCCTCAAAGGTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGVPAASTLEAATVISWSMGSRL*PSKVMK Trigger: CTTCATCACCTTTGAGGGCCAGAGGCGTGAGCCCAT...AGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGATGGGCTCACGCCTCTaGCCCTCAAAGGTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGRSACCLYPGSCHRDLMMGSRL*PSKVMK Trigger: CTTCATCACCTTTGAGGGCCAGAGGCGTGAGCCCAT...CATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGATATCCTGGTTTCCTGCAGTaGAGTTGGTGGCTCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASTLEAATVISWSGLLGYPGFLQ*SWWLPK Trigger: TTTGGGGAGCCACCAACTCCACTGCAGGAAACCAGG...ATATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCGACGCCGCTCCAACTaGGGCTTCAGAATAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: VPAASTLEAATVISWSGLRRRSN*GFRIKF Trigger: AAATTTTATTCTGAAGCCTCAGTTGGAGCGGCGTCG...CAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR TCA 90 bp | CGAGGTCAGAGACATCCATTTCACTGCCGTGGCTCTCTCCTATGCAGATCCTGGCCCCTTGATCTGCAGTaGGCATACCCAGGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGQRHPFHCRGSLLCRSWPLDLQ*AYPGLP Trigger: AGGGAGACCTGGGTATGCTCACTGCAGATCAAGGGG...CCAGGATCTGCATAGGAGAGAGCCACGGCAGTGAAATGGATGTCTCTGACCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | CCTGAGGGGCCCAGGGATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGGCTTCCATTGCCCAATaGCAGACCATCTTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEGPRDRGKGCDPRKECLASIAQ*QTIFQP Trigger: TGGCTGAAAGATGGTCTGGCATTGGGCAATGGAAGC...CAGGCACTCCTTCCTAGGATCACAACCCTTGCCTCTATCCCTGGGCCCCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGACCCAGAAGTCCTCATaGAGGCTGAAGTGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRSACCLYPGSCHRDLMTQKSS*RLKWLP Trigger: TGGAAGCCACTTCAGCCTCCATGAGGACTTCTGGGT...CATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGAGTTGGTGGCTCCCCAAAGACAGGTCCACGGACACCTGCAGGATACCACACCCAGAAGTCCTCATaGAGGCTGAAGTGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGVGGSPKTGPRTPAGYHTQKSS*RLKWLP Trigger: TGGAAGCCACTTCAGCCTCCATGAGGACTTCTGGGT...GTGGTATCCTGCAGGTGTCCGTGGACCTGTCTTTGGGGAGCCACCAACTCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGGCCCAGGGATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGCAAATTTGCGGTCCTCTaGGCAGTCGCTATAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LRGPGIEARVVILGRSACKFAVL*AVAIGH Trigger: GTGTCCTATAGCGACTGCCCAGAGGACCGCAAATTT...GCAGGCACTCCTTCCTAGGATCACAACCCTTGCCTCTATCCCTGGGCCCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGAGGGGCCCAGGGATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCCTGGTTTCCTGCAGTaGAGTTGGTGGCTCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FPEGPRDRGKGCDPRKECPGFLQ*SWWLPK Trigger: TTTGGGGAGCCACCAACTCCACTGCAGGAAACCAGG...GCACTCCTTCCTAGGATCACAACCCTTGCCTCTATCCCTGGGCCCCTCAGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGGGCCCAGGGATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGCGACGCCGCTCCAACTaGGGCTTCAGAATAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: PEGPRDRGKGCDPRKECLRRRSN*GFRIKF Trigger: AAATTTTATTCTGAAGCCTCAGTTGGAGCGGCGTCG...CAGGCACTCCTTCCTAGGATCACAACCCTTGCCTCTATCCCTGGGCCCCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGATATTCAAAGCAACTTCTCTaGCAAGGGCAAGACCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASTLEAATVISWSGLLGYSKQLL*QGQDPR Trigger: CCTTGGGTCTTGCCCTTGGCAGAGAAGTTGCTTTGA...ATATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCTCAAAGCAACTTCTCTaGCAAGGGCAAGACCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARVVILGRSACCLYPGSCSKQLL*QGQDPR Trigger: CCTTGGGTCTTGCCCTTGGCAGAGAAGTTGCTTTGA...GCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACGCTTCCATTGCCCAATaGCAGACCATCTTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVVILGRSACCLYPGSCHASIAQ*QTIFQP Trigger: TGGCTGAAAGATGGTCTGGCATTGGGCAATGGAAGC...GTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | CTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGCTTCCATTGCCCAATaGCAGACCATCTTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRSACCLYPGSCHRDLMASIAQ*QTIFQP Trigger: TGGCTGAAAGATGGTCTGGCATTGGGCAATGGAAGC...CATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGTAGAAGTCTGTCCGTaGACTGTAGTTTCGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGVPAASTLEAATVISWSVEVCP*TVVSRA Trigger: GGCTCTCGAAACTACAGTGCACGGACAGACTTCTAC...AGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
||
| CDS-3UTR GCA 90 bp | CTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTAGAAGTCTGTCCGTaGACTGTAGTTTCGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGRSACCLYPGSCHRDLMVEVCP*TVVSRA Trigger: GGCTCTCGAAACTACAGTGCACGGACAGACTTCTAC...CATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGAAATTTGCGGTCCTCTaGGCAGTCGCTATAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LGRSACCLYPGSCHRDLMKFAVL*AVAIGH Trigger: GTGTCCTATAGCGACTGCCCAGAGGACCGCAAATTT...CATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCTCCTATGCAGATCCTaGTTTCCTGCAGTGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVVILGRSACCLYPGSCHLLCRS*FPAVEL Trigger: CAACTCCACTGCAGGAAACCAGGATCTGCATAGGAG...GTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGCTCCTATGCAGATCCTaGTTTCCTGCAGTGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGRSACCLYPGSCHRDLMLLCRS*FPAVEL Trigger: CAACTCCACTGCAGGAAACCAGGATCTGCATAGGAG...CATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGAGAACACCCAAGCTGTaGAATTCAAAGCAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCLYPGSCHRDLMVWAAGRTPKL*NSKQLL Trigger: GAGAAGTTGCTTTGAATTGCACAGCTTGGGTGTTCT...CCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCATGGTCTGGGCTGCTGGGATATGGGCTACACATCATCCTCAGACACGAGGACAGGATCTCTCGATaGCAGAGTCCTCCAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISWSGLLGYGLHIILRHEDRISR*QSPPSL Trigger: CAGGCTTGGAGGACTCTGGCATCGAGAGATCCTGTC...CTCGTGTCTGAGGATGATGTGTAGCCCATATCCCAGCAGCCCAGACCATGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAGGGGCCCAGGGATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGCAAAGAGTGAAGGAATaGGAGCTGACATTCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PEGPRDRGKGCDPRKECLQRVKE*ELTFQT Trigger: TGTCTGGAATGTCAGCTCCCATTCCTTCACTCTTTG...CAGGCACTCCTTCCTAGGATCACAACCCTTGCCTCTATCCCTGGGCCCCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGGGGCCCAGGGATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGCAGAACACCCAAGCTGTaGAATTCAAAGCAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRGPGIEARVVILGRSACRTPKL*NSKQLL Trigger: GAGAAGTTGCTTTGAATTGCACAGCTTGGGTGTTCT...GCAGGCACTCCTTCCTAGGATCACAACCCTTGCCTCTATCCCTGGGCCCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTCAAAGAGTGAAGGAATaGGAGCTGACATTCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: EGVPAASTLEAATVISWSQRVKE*ELTFQT Trigger: TGTCTGGAATGTCAGCTCCCATTCCTTCACTCTTTG...AGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CCA 90 bp | GGGTGTATGGGCTCACGCCTCTGGCCCTCAAAGGTGATGAAGATAGGTCTGCGGCAAAGAGTGAAGGAATaGGAGCTGACATTCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GCMGSRLWPSKVMKIGLRQRVKE*ELTFQT Trigger: TGTCTGGAATGTCAGCTCCCATTCCTTCACTCTTTG...CCGCAGACCTATCTTCATCACCTTTGAGGGCCAGAGGCGTGAGCCCATACACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| CDS-3UTR CCA 90 bp | GCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCAAAGAGTGAAGGAATaGGAGCTGACATTCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ARVVILGRSACCLYPGSCQRVKE*ELTFQT Trigger: TGTCTGGAATGTCAGCTCCCATTCCTTCACTCTTTG...GCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CCA 90 bp | TGGTCTGGGCTGCTGGGATATGGGCTACACATCATCCTCAGACACGAGGCAGTAAAATTTGCGGTCCTCTaGGCAGTCGCTATAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: WSGLLGYGLHIILRHEAVKFAVL*AVAIGH Trigger: GTGTCCTATAGCGACTGCCCAGAGGACCGCAAATTT...TACTGCCTCGTGTCTGAGGATGATGTGTAGCCCATATCCCAGCAGCCCAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| CDS-3UTR TCA 90 bp | CACGAGGCAGTAGAAGTCTGTCCGTGCACTGTAGTTTCGAGAGCCGAGGTCAGACGACGCCGCTCCAACTaGGGCTTCAGAATAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: HEAVEVCPCTVVSRAEVRRRRSN*GFRIKF Trigger: AAATTTTATTCTGAAGCCTCAGTTGGAGCGGCGTCG...TCTGACCTCGGCTCTCGAAACTACAGTGCACGGACAGACTTCTACTGCCTCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| CDS CCA 90 bp | GTGGCTCTCTCCTATGCAGATCCTGGTTTCCTGCAGTGGAGTTGGTaGCTCCCCAAAGACAGGTCCACGGACACCCAGGTCTCCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VALSYADPGFLQWSW*LPKDRSTDTQVSLR Trigger: CCTGAGGGAGACCTGGGTGTCCGTGGACCTGTCTTTGGGGAGCCACCAACTCCACTGCAGGAAACCAGGATCTGCATAGGAGAGAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
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| CDS-3UTR CAA 90 bp | GGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTCCTCTAGGAAGAGTTaGTATCCCCGACGCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GCDPRKECLLPLPWKLPPSSRKS*YPRRRS Trigger: GGAGCGGCGTCGGGGATACAAACTCTTCCTAGAGGA...CGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS CCA 90 bp | TTCACTGCCGTGGCTCTCTCCTATGCAGATCCTGGTTTCCTGCAGTaGAGTTGGTGGCTCCCCAAAGACAGGTCCACGGACACCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FTAVALSYADPGFLQ*SWWLPKDRSTDTQV Trigger: GACCTGGGTGTCCGTGGACCTGTCTTTGGGGAGCCACCAACTCCACTGCAGGAAACCAGGATCTGCATAGGAGAGAGCCACGGCAGTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
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| CDS-3UTR CAA 90 bp | GTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGACAATCTCTGAGAAGTaGGCGCTGACCCAGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPAASTLEAATVISWSGLTISEK*ALTQKS Trigger: GGACTTCTGGGTCAGCGCCAACTTCTCAGAGATTGT...CAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CAA 90 bp | GCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCTCCTCTAGGAAGAGTTaGTATCCCCGACGCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARVVILGRSACCLYPGSCSSRKS*YPRRRS Trigger: GGAGCGGCGTCGGGGATACAAACTCTTCCTAGAGGA...GCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACCCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CAA 90 bp | GACAGGTCCACGGACACCTGCAGGATACCACAAGGCCTGAGGCTCCAAGATCGATCCTCTAGGAAGAGTTaGTATCCCCGACGCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DRSTDTCRIPQGLRLQDRSSRKS*YPRRRS Trigger: GGAGCGGCGTCGGGGATACAAACTCTTCCTAGAGGA...TCGATCTTGGAGCCTCAGGCCTTGTGGTATCCTGCAGGTGTCCGTGGACCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| CDS-3UTR CAA 90 bp | CCTGAGGGGCCCAGGGATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGTTTCCTGCAGTGGAGTaGGTGGCTCCCCAAAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: PEGPRDRGKGCDPRKECLFPAVE*VAPQRQ Trigger: CTGTCTTTGGGGAGCCACCAACTCCACTGCAGGAAA...CAGGCACTCCTTCCTAGGATCACAACCCTTGCCTCTATCCCTGGGCCCCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
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| CDS-3UTR CAA 90 bp | GGTTGTGATCCTAGGAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTTTCCTGCAGTGGAGTaGGTGGCTCCCCAAAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: GCDPRKECLLPLPWKLPPFPAVE*VAPQRQ Trigger: CTGTCTTTGGGGAGCCACCAACTCCACTGCAGGAAA...CGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTCCTAGGATCACAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
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| CDS TCA 90 bp | GTGGCTTCCATTGCCCAATGCCAGACCATCTTTCAGCCACTGCACTaGTGGCTGGGGACACTGGGGCCTAGAGAACACCCAAGCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VASIAQCQTIFQPLH*WLGTLGPREHPSCA Trigger: TGCACAGCTTGGGTGTTCTCTAGGCCCCAGTGTCCCCAGCCATCAGTGCAGTGGCTGAAAGATGGTCTGGCATTGGGCAATGGAAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS GCA 90 bp | TCCATTTCACTGCCGTGGCTCTCTCCTATGCAGATCCTGGTTTCCTaGAGTGGAGTTGGTGGCTCCCCAAAGACAGGTCCACGGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: SISLPWLSPMQILVS*SGVGGSPKTGPRTP Trigger: GGGTGTCCGTGGACCTGTCTTTGGGGAGCCACCAACTCCACTGCAGGAAACCAGGATCTGCATAGGAGAGAGCCACGGCAGTGAAATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 |
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| CDS GCA 90 bp | CTGAGTCCTTTCCAGGACGCTGGAGCTGTGTTTGACCCCTTGATCTaGAGTGAGCATACCCAGGTCTCCCTCAGGGTCTGGATCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSPFQDAGAVFDPLI*SEHTQVSLRVWIQL Trigger: GAGCTGGATCCAGACCCTGAGGGAGACCTGGGTATGCTCACTGCAGATCAAGGGGTCAAACACAGCTCCAGCGTCCTGGAAAGGACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| CDS-3UTR CAA 90 bp | CTGAGGGGCCCAGGGATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGCTCTGCATTGGTCAAGTaGAGCACCAGGACACTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRGPGIEARVVILGRSACSALVK*STRTLD Trigger: GTCCAGTGTCCTGGTGCTCAACTTGACCAATGCAGA...GCAGGCACTCCTTCCTAGGATCACAACCCTTGCCTCTATCCCTGGGCCCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS GCA 90 bp | CTGAAGTGGCTTCCATTGCCCAATGCCAGACCATCTTTCAGCCACTaGACTGATGGCTGGGGACACTGGGGCCTAGAGAACACCCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LKWLPLPNARPSFSH*TDGWGHWGLENTQA Trigger: AGCTTGGGTGTTCTCTAGGCCCCAGTGTCCCCAGCCATCAGTGCAGTGGCTGAAAGATGGTCTGGCATTGGGCAATGGAAGCCACTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CAA 90 bp | GAAGGAGTGCCTGCTGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTACAATCTCTGAGAAGTaGGCGCTGACCCAGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGVPAASTLEAATVISWSTISEK*ALTQKS Trigger: GGACTTCTGGGTCAGCGCCAACTTCTCAGAGATTGT...AGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCAGCAGGCACTCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGGTGATGAAGATAGGTCTGCGGGTGAGCTCCAGTAGGCGGCACAGTCCCACAATCTCTGAGAAGTaGGCGCTGACCCAGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKVMKIGLRVSSSRRHSPTISEK*ALTQKS Trigger: GGACTTCTGGGTCAGCGCCAACTTCTCAGAGATTGT...GGGACTGTGCCGCCTACTGGAGCTCACCCGCAGACCTATCTTCATCACCTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| CDS-3UTR CAA 90 bp | TGGAGTTGGTGGCTCCCCAAAGACAGGTCCACGGACACCTGCAGGATACCACAAACAATCTCTGAGAAGTaGGCGCTGACCCAGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WSWWLPKDRSTDTCRIPQTISEK*ALTQKS Trigger: GGACTTCTGGGTCAGCGCCAACTTCTCAGAGATTGT...TTGTGGTATCCTGCAGGTGTCCGTGGACCTGTCTTTGGGGAGCCACCAACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| CDS CCA 90 bp | CCATTGCCCAATGCCAGACCATCTTTCAGCCACTGCACTGATGGCTaGGGACACTGGGGCCTAGAGAACACCCAAGCTGTGCAATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLPNARPSFSHCTDG*GHWGLENTQAVQFK Trigger: TTTGAATTGCACAGCTTGGGTGTTCTCTAGGCCCCAGTGTCCCCAGCCATCAGTGCAGTGGCTGAAAGATGGTCTGGCATTGGGCAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS CCA 90 bp | TCTGAGAAGTTGGCGCTGACCCAGAAGTCCTCATGGAGGCTGAAGTaGCTTCCATTGCCCAATGCCAGACCATCTTTCAGCCACTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SEKLALTQKSSWRLK*LPLPNARPSFSHCT Trigger: AGTGCAGTGGCTGAAAGATGGTCTGGCATTGGGCAATGGAAGCCACTTCAGCCTCCATGAGGACTTCTGGGTCAGCGCCAACTTCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS TCA 90 bp | CTCTGCATTGGTCAAGTTGAGCACCAGGACACTGGACACAATCTCTaGGAAGTTGGCGCTGACCCAGAAGTCCTCATGGAGGCTGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LCIGQVEHQDTGHNL*EVGADPEVLMEAEV Trigger: CACTTCAGCCTCCATGAGGACTTCTGGGTCAGCGCCAACTTCTCAGAGATTGTGTCCAGTGTCCTGGTGCTCAACTTGACCAATGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CAA 90 bp | CCTGAGGGGCCCAGGGATAGAGGCAAGGGTTGTGATCCTAGGAAGGAGTGCCTGATAAAATTTACAAATTaGCGGTCCTCTGGGCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PEGPRDRGKGCDPRKECLIKFTN*RSSGQS Trigger: CGACTGCCCAGAGGACCGCAAATTTGTAAATTTTAT...CAGGCACTCCTTCCTAGGATCACAACCCTTGCCTCTATCCCTGGGCCCCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS TCA 90 bp | CTCTGCATTGGTCAAGTTGAGCACCAGGACACTGGACACAATCTCTaGGAAGTTGGCGCTGACCCAGAAGTCCTCATGGAGGCTGAAGNN | + |
|
Preference number: 5 (lower is better) Translates to: LCIGQVEHQDTGHNL*EVGADPEVLMEAEX Trigger: NNCTTCAGCCTCCATGAGGACTTCTGGGTCAGCGCCAACTTCTCAGAGATTGTGTCCAGTGTCCTGGTGCTCAACTTGACCAATGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| CDS CCA 90 bp | AATGCCAGACCATCTTTCAGCCACTGCACTGATGGCTGGGGACACTaGGGCCTAGAGAACACCCAAGCTGTGCAATTCAAAGCAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NARPSFSHCTDGWGH*GLENTQAVQFKATS Trigger: AGAAGTTGCTTTGAATTGCACAGCTTGGGTGTTCTCTAGGCCCCAGTGTCCCCAGCCATCAGTGCAGTGGCTGAAAGATGGTCTGGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CAA 90 bp | TGCCTCTACCCTGGAAGCTGCCACCGTGATCTCATGGTCTGGGCTGCTGGGATAATAAAATTTACAAATTaGCGGTCCTCTGGGCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CLYPGSCHRDLMVWAAGIIKFTN*RSSGQS Trigger: CGACTGCCCAGAGGACCGCAAATTTGTAAATTTTAT...TATCCCAGCAGCCCAGACCATGAGATCACGGTGGCAGCTTCCAGGGTAGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS TCA 90 bp | TCGCGGTCCTCTAGGAAGAGTTTGTATCCCCGACGCCGCTCCAACTaGGGCTTCAGAATAAAATTTACAAATTTGCGGTCCTCTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSRKSLYPRRRSN*GFRIKFTNLRSSGQ Trigger: CTGCCCAGAGGACCGCAAATTTGTAAATTTTATTCTGAAGCCTCAGTTGGAGCGGCGTCGGGGATACAAACTCTTCCTAGAGGACCGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS CCA 90 bp | GTGCAATTCAAAGCAACTTCTCTGCCAAGGGCAAGACCCAAGGCCTaGTCTTCAGATGGGGAAAGGAAATTAGGGGCCATGTCACAGACA | + |
|
Preference number: 5 (lower is better) Translates to: VQFKATSLPRARPKA*SSDGERKLGAMSQT Trigger: TGTCTGTGACATGGCCCCTAATTTCCTTTCCCCATCTGAAGACCAGGCCTTGGGTCTTGCCCTTGGCAGAGAAGTTGCTTTGAATTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS-3UTR CAA 90 bp | TGGAGTTGGTGGCTCCCCAAAGACAGGTCCACGGACACCTGCAGGATACCACAAATAAAATTTACAAATTaGCGGTCCTCTGGGCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WSWWLPKDRSTDTCRIPQIKFTN*RSSGQS Trigger: CGACTGCCCAGAGGACCGCAAATTTGTAAATTTTAT...TTGTGGTATCCTGCAGGTGTCCGTGGACCTGTCTTTGGGGAGCCACCAACTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| CDS CAA 90 bp | CCAAGCCTGAGTCCTTTCCAGGACGCTGGAGCTGTGTTTGACCCCTaGATCTGCAGTGAGCATACCCAGGTCTCCCTCAGGGTCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: PSLSPFQDAGAVFDP*ICSEHTQVSLRVWI Trigger: GATCCAGACCCTGAGGGAGACCTGGGTATGCTCACTGCAGATCAAGGGGTCAAACACAGCTCCAGCGTCCTGGAAAGGACTCAGGCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| CDS TCA 72 bp | GTCCTTTCCAGGACGCTGGAGCTGTGTTTGACCCCTTaGTCTGCAGTGAGCATACCCAGGTCTCCCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VLSRTLELCLTP*SAVSIPRSPSG Trigger: CCCTGAGGGAGACCTGGGTATGCTCACTGCAGATCAAGGGGTCAAACACAGCTCCAGCGTCCTGGAAAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| CDS GCA 72 bp | TTCCAGGACGCTGGAGCTGTGTTTGACCCCTTGATCTaGAGTGAGCATACCCAGGTCTCCCTCAGGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FQDAGAVFDPLI*SEHTQVSLRVW Trigger: CCAGACCCTGAGGGAGACCTGGGTATGCTCACTGCAGATCAAGGGGTCAAACACAGCTCCAGCGTCCTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| CDS CAA 90 bp | TTGGCGCTGACCCAGAAGTCCTCATGGAGGCTGAAGTGGCTTCCATaGCCCAATGCCAGACCATCTTTCAGCCACTGCACTGATGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LALTQKSSWRLKWLP*PNARPSFSHCTDGW Trigger: CCAGCCATCAGTGCAGTGGCTGAAAGATGGTCTGGCATTGGGCAATGGAAGCCACTTCAGCCTCCATGAGGACTTCTGGGTCAGCGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS TCA 72 bp | ATTGCCCAATGCCAGACCATCTTTCAGCCACTGCACTaGTGGCTGGGGACACTGGGGCCTAGAGAACACCCA | + |
|
Preference number: 6 (lower is better) Translates to: IAQCQTIFQPLH*WLGTLGPREHP Trigger: TGGGTGTTCTCTAGGCCCCAGTGTCCCCAGCCATCAGTGCAGTGGCTGAAAGATGGTCTGGCATTGGGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS TCA 72 bp | GAGACAGGATCTCTCGATGCCAGAGTCCTCCAAGCCTaGGTCCTTTCCAGGACGCTGGAGCTGTGTTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: ETGSLDARVLQA*VLSRTLELCLT Trigger: GGTCAAACACAGCTCCAGCGTCCTGGAAAGGACTCAGGCTTGGAGGACTCTGGCATCGAGAGATCCTGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210167.2 |
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| CDS GCA 72 bp | CTTCCATTGCCCAATGCCAGACCATCTTTCAGCCACTaGACTGATGGCTGGGGACACTGGGGCCTAGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPLPNARPSFSH*TDGWGHWGLEN Trigger: GTTCTCTAGGCCCCAGTGTCCCCAGCCATCAGTGCAGTGGCTGAAAGATGGTCTGGCATTGGGCAATGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS CCA 72 bp | AATGCCAGACCATCTTTCAGCCACTGCACTGATGGCTaGGGACACTGGGGCCTAGAGAACACCCAAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: NARPSFSHCTDG*GHWGLENTQAV Trigger: CACAGCTTGGGTGTTCTCTAGGCCCCAGTGTCCCCAGCCATCAGTGCAGTGGCTGAAAGATGGTCTGGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS CCA 72 bp | TCTGCCAAGGGCAAGACCCAAGGCCTGGTCTTCAGATaGGGAAAGGAAATTAGGGGCCATGTCACAGACACC | + |
|
Preference number: 6 (lower is better) Translates to: SAKGKTQGLVFR*GKEIRGHVTDT Trigger: GGTGTCTGTGACATGGCCCCTAATTTCCTTTCCCCATCTGAAGACCAGGCCTTGGGTCTTGCCCTTGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS CAA 90 bp | GGTCCTCTGGGCAGTCGCGTTCATCTCCACCTCCCCGTAAGTGTCTaGGTACCAAAGCAGCATGTTCAGCCGACACTTAACATAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPLGSRVHLHLPVSV*VPKQHVQPTLNIEQ Trigger: CTGCTCTATGTTAAGTGTCGGCTGAACATGCTGCTTTGGTACCAAGACACTTACGGGGAGGTGGAGATGAACGCGACTGCCCAGAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
||
| CDS TCA 72 bp | GGTCAAGTTGAGCACCAGGACACTGGACACAATCTCTaGGAAGTTGGCGCTGACCCAGAAGTCCTCATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GQVEHQDTGHNL*EVGADPEVLME Trigger: CTCCATGAGGACTTCTGGGTCAGCGCCAACTTCTCAGAGATTGTGTCCAGTGTCCTGGTGCTCAACTTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000209887.2 ENSMUST00000210167.2 |
||
| CDS CAA 72 bp | ACCCAGAAGTCCTCATGGAGGCTGAAGTGGCTTCCATaGCCCAATGCCAGACCATCTTTCAGCCACTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: TQKSSWRLKWLP*PNARPSFSHCT Trigger: AGTGCAGTGGCTGAAAGATGGTCTGGCATTGGGCAATGGAAGCCACTTCAGCCTCCATGAGGACTTCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS CAA 72 bp | TTGAGCACCAGGACACTGGACACAATCTCTGAGAAGTaGGCGCTGACCCAGAAGTCCTCATGGAGGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSTRTLDTISEK*ALTQKSSWRLK Trigger: CTTCAGCCTCCATGAGGACTTCTGGGTCAGCGCCAACTTCTCAGAGATTGTGTCCAGTGTCCTGGTGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097958.3 ENSMUST00000209199.2 ENSMUST00000209294.2 ENSMUST00000209887.2 ENSMUST00000210167.2 |
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| CDS CAA 72 bp | GGCAGTCGCGTTCATCTCCACCTCCCCGTAAGTGTCTaGGTACCAAAGCAGCATGTTCAGCCGACACTTAAC | + |
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Preference number: 6 (lower is better) Translates to: GSRVHLHLPVSV*VPKQHVQPTLN Trigger: GTTAAGTGTCGGCTGAACATGCTGCTTTGGTACCAAGACACTTACGGGGAGGTGGAGATGAACGCGACTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209887.2 |
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| CDS CAA 90 bp | TTGGTCAAGTTGAGCACCAGGACACTGGACACAATCTCTGAGAAGTaGGCGCTGACCCAGAAGTCCTCATGGAGGCTGAAGTGGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LVKLSTRTLDTISEK*ALTQKSSWRLKWLP Trigger: TGGAAGCCACTTCAGCCTCCATGAGGACTTCTGGGTCAGCGCCAACTTCTCAGAGATTGTGTCCAGTGTCCTGGTGCTCAACTTGACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS CAA 72 bp | CTTCCCATCGTTCATCTCCACCTCCCCGTAAGTGTCTaGGTACCAAAGCAGCATGTTCAGCCGACACTTAAC | + |
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Preference number: 6 (lower is better) Translates to: LPIVHLHLPVSV*VPKQHVQPTLN Trigger: GTTAAGTGTCGGCTGAACATGCTGCTTTGGTACCAAGACACTTACGGGGAGGTGGAGATGAACGATGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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| CDS GCA 72 bp | ATTCCAGACAGAACAGGTGAAGGTTCCATAGTCCTCTaGATTGGTCAAGTTGAGCACCAGGACACTGGACAC | + |
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Preference number: 6 (lower is better) Translates to: IPDRTGEGSIVL*IGQVEHQDTGH Trigger: GTGTCCAGTGTCCTGGTGCTCAACTTGACCAATGCAGAGGACTATGGAACCTTCACCTGTTCTGTCTGGAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000209887.2 ENSMUST00000210167.2 |
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| CDS TCA 72 bp | TCTAGGAAGAGTTTGTATCCCCGACGCCGCTCCAACTaGGGCTTCAGAATAAAATTTACAAATTTGCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SRKSLYPRRRSN*GFRIKFTNLRS Trigger: GGACCGCAAATTTGTAAATTTTATTCTGAAGCCTCAGTTGGAGCGGCGTCGGGGATACAAACTCTTCCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097958.3 ENSMUST00000209294.2 ENSMUST00000210167.2 |
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