Pregenerated sensors for SIDT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034908Ensembl transcript IDs: ENSMUST00000038488.17, ENSMUST00000114573.9, ENSMUST00000159033.2, ENSMUST00000160138.8, ENSMUST00000160618.8, ENSMUST00000161042.2, ENSMUST00000161606.8, ENSMUST00000162072.8, ENSMUST00000162379.2, ENSMUST00000162529.8
Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GGAGGGTCGTACCTAGGCCCCTTGCAGGCCTTAGCACCGAAAGCCTaGCACCAGCTGGCCAGCCCCCAAAGTCTCCTACCTGCATCTGTC | + |
Preference number: 1 (lower is better) Translates to: GGSYLGPLQALAPKA*HQLASPQSLLPASV Trigger: GACAGATGCAGGTAGGAGACTTTGGGGGCTGGCCAGCTGGTGCCAGGCTTTCGGTGCTAAGGCCTGCAAGGGGCCTAGGTACGACCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CCA 90 bp | GGCACCAGCTGGCCAGCCCCCAAAGTCTCCTACCTGCATCTGTCCTaGCAGGTCAGAGTGGGCAGTGATAGCAGCCAGCTACAGACCCAG | + |
Preference number: 1 (lower is better) Translates to: GTSWPAPKVSYLHLS*QVRVGSDSSQLQTQ Trigger: CTGGGTCTGTAGCTGGCTGCTATCACTGCCCACTCTGACCTGCCAGGACAGATGCAGGTAGGAGACTTTGGGGGCTGGCCAGCTGGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR TCA 90 bp | ACCGTTCCGTGGCCTCTAGACATTCTTGGGCAGTGTCAATGGCACTaGGAGGCCCCCATCTGGGGCTTGGCAGGACTGAGGGTGTGGAAG | + |
Preference number: 1 (lower is better) Translates to: TVPWPLDILGQCQWH*EAPIWGLAGLRVWK Trigger: CTTCCACACCCTCAGTCCTGCCAAGCCCCAGATGGGGGCCTCTCAGTGCCATTGACACTGCCCAAGAATGTCTAGAGGCCACGGAACGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CCA 90 bp | CTAGGGTCCTGGGGAGGACCCAACACTGAGAAGAAAGCAGCAATTTaGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCTCCTCCGCAGA | + |
Preference number: 1 (lower is better) Translates to: LGSWGGPNTEKKAAI*PVSGECGAGLLLRR Trigger: TCTGCGGAGGAGGAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCTCAGTGTTGGGTCCTCCCCAGGACCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CCA 90 bp | CCAAGGCTCAGTGCCACCAGGAACTATCCTGAGTCAGGCCTGGGCTaGAATCTCGCTGTCTTGCCACGACATCCAATGCTGGGCAGCAGA | + |
Preference number: 1 (lower is better) Translates to: PRLSATRNYPESGLG*NLAVLPRHPMLGSR Trigger: TCTGCTGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCCAGCCCAGGCCTGACTCAGGATAGTTCCTGGTGGCACTGAGCCTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CCA 90 bp | CAGCCCCCAAAGTCTCCTACCTGCATCTGTCCTGGCAGGTCAGAGTaGGCAGTGATAGCAGCCAGCTACAGACCCAGGGAGAGCTTAGGT | + |
Preference number: 1 (lower is better) Translates to: QPPKSPTCICPGRSE*AVIAASYRPRESLG Trigger: ACCTAAGCTCTCCCTGGGTCTGTAGCTGGCTGCTATCACTGCCCACTCTGACCTGCCAGGACAGATGCAGGTAGGAGACTTTGGGGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CCA 90 bp | CAACTCCAAGGCTCAGTGCCACCAGGAACTATCCTGAGTCAGGCCTaGGCTGGAATCTCGCTGTCTTGCCACGACATCCAATGCTGGGCA | + |
Preference number: 1 (lower is better) Translates to: QLQGSVPPGTILSQA*AGISLSCHDIQCWA Trigger: TGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCCAGCCCAGGCCTGACTCAGGATAGTTCCTGGTGGCACTGAGCCTTGGAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR TCA 90 bp | CACTGCGTCAAAGGAGCGGTCCTGGTAACTGTAGGAGAGGTCCCCTaGACCTGCGCTTTCAACCAACCCGTCAGTGGATCCGGAACCATT | + |
Preference number: 1 (lower is better) Translates to: HCVKGAVLVTVGEVP*TCAFNQPVSGSGTI Trigger: AATGGTTCCGGATCCACTGACGGGTTGGTTGAAAGCGCAGGTTCAGGGGACCTCTCCTACAGTTACCAGGACCGCTCCTTTGACGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162379.2 |
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3UTR GCA 90 bp | ATTCACCACCGTCTGGTAGGTGATCACCAGCTGCACCACAGGAAGTaGGTAGAAGACCGCAATGGTGGCTATGTTCCTGAGGGGGAAGGG | + |
Preference number: 1 (lower is better) Translates to: IHHRLVGDHQLHHRK*VEDRNGGYVPEGEG Trigger: CCCTTCCCCCTCAGGAACATAGCCACCATTGCGGTCTTCTACGCACTTCCTGTGGTGCAGCTGGTGATCACCTACCAGACGGTGGTGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
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3UTR CCA 90 bp | GAATCTCGCTGTCTTGCCACGACATCCAATGCTGGGCAGCAGAGCTaGGACTCATACCCGTGGTGTTCTTGTGGCAACTGGCAGGTGATG | + |
Preference number: 1 (lower is better) Translates to: ESRCLATTSNAGQQS*DSYPWCSCGNWQVM Trigger: CATCACCTGCCAGTTGCCACAAGAACACCACGGGTATGAGTCCCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CCA 90 bp | CCCAGACCCGCCTCTTCTCCCAGCCCAAGAGCTATAAAAACATGGTaGAGAGAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGG | + |
Preference number: 1 (lower is better) Translates to: PRPASSPSPRAIKTW*REGNTFLGPTLGIW Trigger: CCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTCTCTCCACCATGTTTTTATAGCTCTTGGGCTGGGAGAAGAGGCGGGTCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CCA 90 bp | ATTGCCTTCCCACCTTCCTCTCCAAAGGGACAAATGGAGAGCCAGTaGATAAACAAGACAGATGGACAGACTAGGGTCCTGGGGAGGACC | + |
Preference number: 1 (lower is better) Translates to: IAFPPSSPKGQMESQ*INKTDGQTRVLGRT Trigger: GGTCCTCCCCAGGACCCTAGTCTGTCCATCTGTCTTGTTTATCCACTGGCTCTCCATTTGTCCCTTTGGAGAGGAAGGTGGGAAGGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR TCA 90 bp | CCAGAGCTGGGTGACTCTGTAAACGCCAAGGCTCTTAGGCCTACGTaGCTAACACAGAACTTGGCTAAATACTGGACGGAAACTCAGAAA | + |
Preference number: 1 (lower is better) Translates to: PELGDSVNAKALRPT*LTQNLAKYWTETQK Trigger: TTTCTGAGTTTCCGTCCAGTATTTAGCCAAGTTCTGTGTTAGTCACGTAGGCCTAAGAGCCTTGGCGTTTACAGAGTCACCCAGCTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR GCA 90 bp | TCCAAGCACAGGTCAGGGAGGAGGGTCGTACCTAGGCCCCTTGCAGGCCTTAGCCCAGTGTCTGGGGAATaGGGAGCAGGCCTCCTCCTC | + |
Preference number: 2 (lower is better) Translates to: SKHRSGRRVVPRPLAGLSPVSGE*GAGLLL Trigger: GAGGAGGAGGCCTGCTCCGCATTCCCCAGACACTGG...GCTAAGGCCTGCAAGGGGCCTAGGTACGACCCTCCTCCCTGACCTGTGCTTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | GTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTCTGCGCCAAGGACCAGAATaGCCAGGGGCCAGAGCTGGG | + |
Preference number: 2 (lower is better) Translates to: VKGNQVPKWPGAWSWVTLRQGPE*PGARAG Trigger: CCCAGCTCTGGCCCCTGGCCATTCTGGTCCTTGGCG...CAGAGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CAA 90 bp | AGGAAGAGCAGCCCCAGCAGGATGTACCCCAAGTTGCTGAGGATGTaGTTGAAGGCGCTGAGGTTGCCCAGCGGGTGGGCACAGAGGAAG | + |
Preference number: 2 (lower is better) Translates to: RKSSPSRMYPKLLRM*LKALRLPSGWAQRK Trigger: CTTCCTCTGTGCCCACCCGCTGGGCAACCTCAGCGCCTTCAACAACATCCTCAGCAACTTGGGGTACATCCTGCTGGGGCTGCTCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
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3UTR-3UTR TCA 90 bp | TCTGTAAACGCCAAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTACAGTGTCAATGGCACTaGGAGGCCCCCATCTGGGGC | + |
Preference number: 2 (lower is better) Translates to: SVNAKDQNGQGPELGDSVQCQWH*EAPIWG Trigger: GCCCCAGATGGGGGCCTCTCAGTGCCATTGACACTG...TACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTTGGCGTTTACAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR GCA 90 bp | GGTGACTCTGTAAACGCCAAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTGCCACGACATCCAATaGTGGGCAGCAGAGCTGGGA | + |
Preference number: 2 (lower is better) Translates to: GDSVNAKDQNGQGPELGDCHDIQ*WAAELG Trigger: TCCCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCA...GTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTTGGCGTTTACAGAGTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR GCA 90 bp | GTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTCTGGCAAAAGGGACTGTGTaGTTGGCACCGTTCCGTGGC | + |
Preference number: 2 (lower is better) Translates to: VKGNQVPKWPGAWSWVTLAKGTV*LAPFRG Trigger: GCCACGGAACGGTGCCAAGCACACAGTCCCTTTTGC...CAGAGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | TCTGTAAACGCCAAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTAAAGCCTGGCACCAGCTaGCCAGCCCCCAAAGTCTCC | + |
Preference number: 2 (lower is better) Translates to: SVNAKDQNGQGPELGDSVKPGTS*PAPKVS Trigger: GGAGACTTTGGGGGCTGGCCAGCTGGTGCCAGGCTT...TACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTTGGCGTTTACAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | GGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTAAGGGACTGTGTGCTTaGCACCGTTCCGTGGCCTCT | + |
Preference number: 2 (lower is better) Translates to: GVKGNQVPKWPGAWSWVTKGLCA*HRSVAS Trigger: AGAGGCCACGGAACGGTGCCAAGCACACAGTCCCTT...AGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR TCA 90 bp | GAGAGAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGGCTGGCCCTCACTGCTaGAGAGCCAGCTCCAAGCAC | + |
Preference number: 2 (lower is better) Translates to: ERRKHIPGAHSWHLEWTWAGPHC*RASSKH Trigger: GTGCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGC...CCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | GATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCGCTGGGCAGCAGAGCTaGGACTCATACCCGTGGTGT | + |
Preference number: 2 (lower is better) Translates to: DQKTQLGLALTAEEPAPSAGQQS*DSYPWC Trigger: ACACCACGGGTATGAGTCCCAGCTCTGCTGCCCAGC...GCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | GGTGACTCTGTAAACGCCAAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACATCCTGAGTCAGGCCTaGGCTGGAATCTCGCTGTCT | + |
Preference number: 2 (lower is better) Translates to: GDSVNAKDQNGQGPELGDILSQA*AGISLS Trigger: AGACAGCGAGATTCCAGCCCAGGCCTGACTCAGGAT...GTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTTGGCGTTTACAGAGTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | ATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCAAAGCCTGGCACCAGCTaGCCAGCCCCCAAAGTCTCC | + |
Preference number: 2 (lower is better) Translates to: IRRLNLGWPSLLKSQLQAKPGTS*PAPKVS Trigger: GGAGACTTTGGGGGCTGGCCAGCTGGTGCCAGGCTT...TGCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | GGTGACTCTGTAAACGCCAAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACGGACACACAGGGACCTaGCATGTTCCTCCCTTTCCA | + |
Preference number: 2 (lower is better) Translates to: GDSVNAKDQNGQGPELGDGHTGT*HVPPFP Trigger: TGGAAAGGGAGGAACATGCCAGGTCCCTGTGTGTCC...GTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTTGGCGTTTACAGAGTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR TCA 90 bp | ATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCAGCTAGGCCTGTGAGGTaGAGCCTGGACCACAGATGC | + |
Preference number: 2 (lower is better) Translates to: IRRLNLGWPSLLKSQLQAARPVR*SLDHRC Trigger: GCATCTGTGGTCCAGGCTTCACCTCACAGGCCTAGC...TGCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR TCA 90 bp | GATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCCTGTGTGTCCTAAGCTaGGAGGAGGGAAGGGATGGG | + |
Preference number: 2 (lower is better) Translates to: DQKTQLGLALTAEEPAPSLCVLS*EEGRDG Trigger: CCCATCCCTTCCCTCCTCTCAGCTTAGGACACACAG...GCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR TCA 90 bp | AAAGTGTTTGGGGATCCCACACTCCAGAGCATAGAGGTCATTCCGCAGCAGGGCCCACCGTCTGGTAGGTaGTCACCAGCTGCACCACAG | + |
Preference number: 2 (lower is better) Translates to: KVFGDPTLQSIEVIPQQGPPSGR*SPAAPQ Trigger: CTGTGGTGCAGCTGGTGATCACCTACCAGACGGTGG...GCCCTGCTGCGGAATGACCTCTATGCTCTGGAGTGTGGGATCCCCAAACACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
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3UTR-3UTR GCA 90 bp | GTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTCTGCCAAAGTCTCCTACCTaGATCTGTCCTGGCAGGTCA | + |
Preference number: 2 (lower is better) Translates to: VKGNQVPKWPGAWSWVTLPKSPT*ICPGRS Trigger: TGACCTGCCAGGACAGATGCAGGTAGGAGACTTTGG...CAGAGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | ACTGAGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCGCTGGGCAGCAGAGCTaGGACTCATACCCGTGGTGT | + |
Preference number: 2 (lower is better) Translates to: TEKKAAIWPVSGECGAGLAGQQS*DSYPWC Trigger: ACACCACGGGTATGAGTCCCAGCTCTGCTGCCCAGC...GAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | GGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTACCAGACTGTGGTCCTaGACAGAGCATGGGAAGAAG | + |
Preference number: 2 (lower is better) Translates to: GVKGNQVPKWPGAWSWVTTRLWS*TEHGKK Trigger: CTTCTTCCCATGCTCTGTCCAGGACCACAGTCTGGT...AGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | AAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTAAACGCCAAGGCTTACCTGCATCTGTCCTaGCAGGTCAGAGTGGGCAGT | + |
Preference number: 2 (lower is better) Translates to: KDQNGQGPELGDSVNAKAYLHLS*QVRVGS Trigger: ACTGCCCACTCTGACCTGCCAGGACAGATGCAGGTA...AGCCTTGGCGTTTACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | GGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTCATTCTAGTGGCTGGTaGGATGAGGTGGCCTCTGAA | + |
Preference number: 2 (lower is better) Translates to: GVKGNQVPKWPGAWSWVTHSSGW*DEVASE Trigger: TTCAGAGGCCACCTCATCCCACCAGCCACTAGAATG...AGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR GCA 90 bp | ATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCATGCCACGACATCCAATaGTGGGCAGCAGAGCTGGGA | + |
Preference number: 2 (lower is better) Translates to: IRRLNLGWPSLLKSQLQACHDIQ*WAAELG Trigger: TCCCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCA...TGCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR GCA 90 bp | AAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTAAACGCCAAGGCTGGAATCTCGCTGTCTTaGCACGACATCCAATGCTGG | + |
Preference number: 2 (lower is better) Translates to: KDQNGQGPELGDSVNAKAGISLS*HDIQCW Trigger: CCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCC...AGCCTTGGCGTTTACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | AGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCTCCATCCTGAGTCAGGCCTaGGCTGGAATCTCGCTGTCT | + |
Preference number: 2 (lower is better) Translates to: RRKQQFGQCLGNAEQASSILSQA*AGISLS Trigger: AGACAGCGAGATTCCAGCCCAGGCCTGACTCAGGAT...GGAGGAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | AAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTAAACGCCAAGGCTCATCATTCTAGTGGCTaGTGGGATGAGGTGGCCTCT | + |
Preference number: 2 (lower is better) Translates to: KDQNGQGPELGDSVNAKAHHSSG*WDEVAS Trigger: AGAGGCCACCTCATCCCACCAGCCACTAGAATGATG...AGCCTTGGCGTTTACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR TCA 90 bp | ATACTGGACGGAAACTCAGAAACCAGCCCTGAGTCCTTTGGTGAGACAGGGCCACTGTGTGTCCTAAGCTaGGAGGAGGGAAGGGATGGG | + |
Preference number: 2 (lower is better) Translates to: ILDGNSETSPESFGETGPLCVLS*EEGRDG Trigger: CCCATCCCTTCCCTCCTCTCAGCTTAGGACACACAG...TGGCCCTGTCTCACCAAAGGACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR TCA 90 bp | CCGGTTATGATTGATCTCTCGCTGCAGGATGATGAGCAGGAAGAGCAGCCCCAGTGTCCTGGTTCCCTGTaGCATTCACCACCGTCTGGT | + |
Preference number: 2 (lower is better) Translates to: PVMIDLSLQDDEQEEQPQCPGSL*HSPPSG Trigger: ACCAGACGGTGGTGAATGTCACAGGGAACCAGGACA...CTGGGGCTGCTCTTCCTGCTCATCATCCTGCAGCGAGAGATCAATCATAACCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
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3UTR-3UTR GCA 90 bp | GATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCGGAATCTCGCTGTCTTaGCACGACATCCAATGCTGG | + |
Preference number: 2 (lower is better) Translates to: DQKTQLGLALTAEEPAPSGISLS*HDIQCW Trigger: CCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCC...GCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | TGGAATCTCGCTGTCTTGCCACGACATCCAATGCTGGGCAGCAGAGCTGGGACTTGTTCTTGTGGCAACTaGCAGGTGATGCAGAGGCAG | + |
Preference number: 2 (lower is better) Translates to: WNLAVLPRHPMLGSRAGTCSCGN*QVMQRQ Trigger: CTGCCTCTGCATCACCTGCCAGTTGCCACAAGAACA...AGTCCCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | ATACTGGACGGAAACTCAGAAACCAGCCCTGAGTCCTTTGGTGAGACAGGGCCACACGACATCCAATGCTaGGCAGCAGAGCTGGGACTC | + |
Preference number: 2 (lower is better) Translates to: ILDGNSETSPESFGETGPHDIQC*AAELGL Trigger: GAGTCCCAGCTCTGCTGCCCAGCATTGGATGTCGTG...TGGCCCTGTCTCACCAAAGGACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | GTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTCTGAAGAAAGCAGCAATTTaGCCAGTGTCTGGGGAATGC | + |
Preference number: 2 (lower is better) Translates to: VKGNQVPKWPGAWSWVTLKKAAI*PVSGEC Trigger: GCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTT...CAGAGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | ATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCATACCTGCATCTGTCCTaGCAGGTCAGAGTGGGCAGT | + |
Preference number: 2 (lower is better) Translates to: IRRLNLGWPSLLKSQLQAYLHLS*QVRVGS Trigger: ACTGCCCACTCTGACCTGCCAGGACAGATGCAGGTA...TGCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR TCA 90 bp | AACCGTAGCATGGAGGAACATAGAACAAAGCTCAGAAACAAAGACCCAGACCCGGGGGCCAGAGCTGGGTaGCTCTGTAAACGCCAAGGC | + |
Preference number: 2 (lower is better) Translates to: NRSMEEHRTKLRNKDPDPGARAG*LCKRQG Trigger: GCCTTGGCGTTTACAGAGTCACCCAGCTCTGGCCCC...CGGGTCTGGGTCTTTGTTTCTGAGCTTTGTTCTATGTTCCTCCATGCTACGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
||
3UTR-3UTR GCA 90 bp | ATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCAAATGGGACAGGACATTaGCTTCCCACCTTCCTCTCC | + |
Preference number: 2 (lower is better) Translates to: IRRLNLGWPSLLKSQLQANGTGH*LPTFLS Trigger: GGAGAGGAAGGTGGGAAGGCAATGTCCTGTCCCATT...TGCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
||
3UTR-3UTR GCA 90 bp | GAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGTGGACCAAAGTCTCCTACCTaGATCTGTCCTGGCAGGTCA | + |
Preference number: 2 (lower is better) Translates to: EGNTFLGPTLGIWNGPGGPKSPT*ICPGRS Trigger: TGACCTGCCAGGACAGATGCAGGTAGGAGACTTTGG...TCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | TCCAAGCACAGGTCAGGGAGGAGGGTCGTACCTAGGCCCCTTGCAGGCCTTAGCCAAATGGAGAGCCAGTaGATAAACAAGACAGATGGA | + |
Preference number: 2 (lower is better) Translates to: SKHRSGRRVVPRPLAGLSQMESQ*INKTDG Trigger: TCCATCTGTCTTGTTTATCCACTGGCTCTCCATTTG...GCTAAGGCCTGCAAGGGGCCTAGGTACGACCCTCCTCCCTGACCTGTGCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | ACAAAGACCCAGACCCGCCTCTTCTCCCAGCCCAAGAGCTATAAAAACATGGTGAAGGGACTGTGTGCTTaGCACCGTTCCGTGGCCTCT | + |
Preference number: 2 (lower is better) Translates to: TKTQTRLFSQPKSYKNMVKGLCA*HRSVAS Trigger: AGAGGCCACGGAACGGTGCCAAGCACACAGTCCCTT...CACCATGTTTTTATAGCTCTTGGGCTGGGAGAAGAGGCGGGTCTGGGTCTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR TCA 90 bp | AACCGTAGCATGGAGGAACATAGAACAAAGCTCAGAAACAAAGACCCAGACCCGGCTAGGCCTGTGAGGTaGAGCCTGGACCACAGATGC | + |
Preference number: 2 (lower is better) Translates to: NRSMEEHRTKLRNKDPDPARPVR*SLDHRC Trigger: GCATCTGTGGTCCAGGCTTCACCTCACAGGCCTAGC...CGGGTCTGGGTCTTTGTTTCTGAGCTTTGTTCTATGTTCCTCCATGCTACGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR TCA 90 bp | GAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGTGGAGGGAGGACCCAACACTaGGAAGAAAGCAGCAATTTG | + |
Preference number: 2 (lower is better) Translates to: EGNTFLGPTLGIWNGPGGGRTQH*EESSNL Trigger: CAAATTGCTGCTTTCTTCTCAGTGTTGGGTCCTCCC...TCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR TCA 90 bp | GAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGTGGAGCAGAATGCAAGGCATaGAATGGGACAGGACATTGC | + |
Preference number: 2 (lower is better) Translates to: EGNTFLGPTLGIWNGPGGAECKA*NGTGHC Trigger: GCAATGTCCTGTCCCATTTCATGCCTTGCATTCTGC...TCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | CTTCCCACCAACCCTAGTGCTGGCATCATTCTAGTGGCTGGTGGGATGAGGTGGAAGAAAGCAGCAATTTaGCCAGTGTCTGGGGAATGC | + |
Preference number: 2 (lower is better) Translates to: LPTNPSAGIILVAGGMRWKKAAI*PVSGEC Trigger: GCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTT...CCACCTCATCCCACCAGCCACTAGAATGATGCCAGCACTAGGGTTGGTGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | CTAACACAGAACTTGGCTAAATACTGGACGGAAACTCAGAAACCAGCCCTGAGTTTAGCACCGAAAGCCTaGCACCAGCTGGCCAGCCCC | + |
Preference number: 2 (lower is better) Translates to: LTQNLAKYWTETQKPALSLAPKA*HQLASP Trigger: GGGGCTGGCCAGCTGGTGCCAGGCTTTCGGTGCTAA...ACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTATTTAGCCAAGTTCTGTGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
||
3UTR-3UTR CCA 90 bp | ACAAAGACCCAGACCCGCCTCTTCTCCCAGCCCAAGAGCTATAAAAACATGGTGAGACTCAACTTGGGCTaGCCCTCACTGCTGAAGAGC | + |
Preference number: 2 (lower is better) Translates to: TKTQTRLFSQPKSYKNMVRLNLG*PSLLKS Trigger: GCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCT...CACCATGTTTTTATAGCTCTTGGGCTGGGAGAAGAGGCGGGTCTGGGTCTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | GAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGTGGAATGCAAGGCATGAAATaGGACAGGACATTGCCTTCC | + |
Preference number: 2 (lower is better) Translates to: EGNTFLGPTLGIWNGPGGMQGMK*DRTLPS Trigger: GGAAGGCAATGTCCTGTCCCATTTCATGCCTTGCAT...TCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | AACCGTAGCATGGAGGAACATAGAACAAAGCTCAGAAACAAAGACCCAGACCCGGCTGGTGGGATGAGGTaGCCTCTGAATTCAGTCCCC | + |
Preference number: 2 (lower is better) Translates to: NRSMEEHRTKLRNKDPDPAGGMR*PLNSVP Trigger: GGGGACTGAATTCAGAGGCCACCTCATCCCACCAGC...CGGGTCTGGGTCTTTGTTTCTGAGCTTTGTTCTATGTTCCTCCATGCTACGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR TCA 90 bp | TCTTGGCATCTGGAATGGACCTGGTGGAGTGAAGGGCAACCAAGTACCAAAGTGGCAGAATGCAAGGCATaGAATGGGACAGGACATTGC | + |
Preference number: 2 (lower is better) Translates to: SWHLEWTWWSEGQPSTKVAECKA*NGTGHC Trigger: GCAATGTCCTGTCCCATTTCATGCCTTGCATTCTGC...CACTTTGGTACTTGGTTGCCCTTCACTCCACCAGGTCCATTCCAGATGCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | CTAACACAGAACTTGGCTAAATACTGGACGGAAACTCAGAAACCAGCCCTGAGTGCAGGACTGAGGGTGTaGAAGGGGACAGTGAGTTGC | + |
Preference number: 2 (lower is better) Translates to: LTQNLAKYWTETQKPALSAGLRV*KGTVSC Trigger: GCAACTCACTGTCCCCTTCCACACCCTCAGTCCTGC...ACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTATTTAGCCAAGTTCTGTGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | TCTTGGCATCTGGAATGGACCTGGTGGAGTGAAGGGCAACCAAGTACCAAAGTGGCCTCTAGACATTCTTaGGCAGTGTCAATGGCACTG | + |
Preference number: 2 (lower is better) Translates to: SWHLEWTWWSEGQPSTKVASRHS*AVSMAL Trigger: CAGTGCCATTGACACTGCCCAAGAATGTCTAGAGGC...CACTTTGGTACTTGGTTGCCCTTCACTCCACCAGGTCCATTCCAGATGCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | AACCGTAGCATGGAGGAACATAGAACAAAGCTCAGAAACAAAGACCCAGACCCGTGTTCTTGTGGCAACTaGCAGGTGATGCAGAGGCAG | + |
Preference number: 2 (lower is better) Translates to: NRSMEEHRTKLRNKDPDPCSCGN*QVMQRQ Trigger: CTGCCTCTGCATCACCTGCCAGTTGCCACAAGAACA...CGGGTCTGGGTCTTTGTTTCTGAGCTTTGTTCTATGTTCCTCCATGCTACGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | CTAACACAGAACTTGGCTAAATACTGGACGGAAACTCAGAAACCAGCCCTGAGTGGACACACAGGGACCTaGCATGTTCCTCCCTTTCCA | + |
Preference number: 2 (lower is better) Translates to: LTQNLAKYWTETQKPALSGHTGT*HVPPFP Trigger: TGGAAAGGGAGGAACATGCCAGGTCCCTGTGTGTCC...ACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTATTTAGCCAAGTTCTGTGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR GCA 90 bp | CTAACACAGAACTTGGCTAAATACTGGACGGAAACTCAGAAACCAGCCCTGAGTAAGGGGACAGTGAGTTaGCACTTCCCACCAACCCTA | + |
Preference number: 2 (lower is better) Translates to: LTQNLAKYWTETQKPALSKGTVS*HFPPTL Trigger: TAGGGTTGGTGGGAAGTGGCAACTCACTGTCCCCTT...ACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTATTTAGCCAAGTTCTGTGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | AGCTACAGACCCAGGGAGAGCTTAGGTCCTGGTGATGGACAAAGAATCAGGCACCAAATGGAGAGCCAGTaGATAAACAAGACAGATGGA | + |
Preference number: 2 (lower is better) Translates to: SYRPRESLGPGDGQRIRHQMESQ*INKTDG Trigger: TCCATCTGTCTTGTTTATCCACTGGCTCTCCATTTG...GTGCCTGATTCTTTGTCCATCACCAGGACCTAAGCTCTCCCTGGGTCTGTAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CCA 90 bp | CTAACACAGAACTTGGCTAAATACTGGACGGAAACTCAGAAACCAGCCCTGAGTCATTCTAGTGGCTGGTaGGATGAGGTGGCCTCTGAA | + |
Preference number: 2 (lower is better) Translates to: LTQNLAKYWTETQKPALSHSSGW*DEVASE Trigger: TTCAGAGGCCACCTCATCCCACCAGCCACTAGAATG...ACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTATTTAGCCAAGTTCTGTGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR GCA 72 bp | GGAGCTCATGGAGTCCAGTCGAGGCCGAGGACCCACTaGGTCAAAGGAGCGGTCCTGGTAACTGTAGGAGAG | + |
Preference number: 3 (lower is better) Translates to: GAHGVQSRPRTH*VKGAVLVTVGE Trigger: CTCTCCTACAGTTACCAGGACCGCTCCTTTGACGCAGTGGGTCCTCGGCCTCGACTGGACTCCATGAGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162379.2 |
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3UTR CCA 72 bp | GCAGCAGAGCTGGGACTCATACCCGTGGTGTTCTTGTaGCAACTGGCAGGTGATGCAGAGGCAGGCGCTAGG | + |
Preference number: 3 (lower is better) Translates to: AAELGLIPVVFL*QLAGDAEAGAR Trigger: CCTAGCGCCTGCCTCTGCATCACCTGCCAGTTGCCACAAGAACACCACGGGTATGAGTCCCAGCTCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CAA 90 bp | ATACTGGACGGAAACTCAGAAACCAGCCCTGAGTCCTTTGGTGAGACAGGGCCAGCCCCCATCTGGGGCTaGGCAGGACTGAGGGTGTGG | + |
Preference number: 3 (lower is better) Translates to: ILDGNSETSPESFGETGPAPIWG*AGLRVW Trigger: CCACACCCTCAGTCCTGCCAAGCCCCAGATGGGGGC...TGGCCCTGTCTCACCAAAGGACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CAA 90 bp | CCCTGTGACATTCACCACCGTCTGGTAGGTGATCACCAGCTGCACCACAGGAAGAGGGCCAAGGTAAGGTaGGCAGGGCCTGAGGAGCTG | + |
Preference number: 3 (lower is better) Translates to: PCDIHHRLVGDHQLHHRKRAKVR*AGPEEL Trigger: CAGCTCCTCAGGCCCTGCCAACCTTACCTTGGCCCT...CTTCCTGTGGTGCAGCTGGTGATCACCTACCAGACGGTGGTGAATGTCACAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
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3UTR TCA 72 bp | CCCTTTCCACGACAGGCACTGGGACTCCTGCTCCCGTaGAAGAGGCAAAAGGGACTGTGTGCTTGGCACCGT | + |
Preference number: 3 (lower is better) Translates to: PFPRQALGLLLP*KRQKGLCAWHR Trigger: ACGGTGCCAAGCACACAGTCCCTTTTGCCTCTTTCACGGGAGCAGGAGTCCCAGTGCCTGTCGTGGAAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CCA 72 bp | TGGCCAGCCCCCAAAGTCTCCTACCTGCATCTGTCCTaGCAGGTCAGAGTGGGCAGTGATAGCAGCCAGCTA | + |
Preference number: 3 (lower is better) Translates to: WPAPKVSYLHLS*QVRVGSDSSQL Trigger: TAGCTGGCTGCTATCACTGCCCACTCTGACCTGCCAGGACAGATGCAGGTAGGAGACTTTGGGGGCTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CCA 72 bp | CCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGTaGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGG | + |
Preference number: 3 (lower is better) Translates to: PGAHSWHLEWTW*SEGQPSTKVAR Trigger: CCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CAA 90 bp | GTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTCTGATCAGAAGACTCAACTaGGGCTGGCCCTCACTGCTG | + |
Preference number: 3 (lower is better) Translates to: VKGNQVPKWPGAWSWVTLIRRLN*GWPSLL Trigger: CAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGAT...CAGAGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CCA 72 bp | GGCTCAGTGCCACCAGGAACTATCCTGAGTCAGGCCTaGGCTGGAATCTCGCTGTCTTGCCACGACATCCAA | + |
Preference number: 3 (lower is better) Translates to: GSVPPGTILSQA*AGISLSCHDIQ Trigger: TTGGATGTCGTGGCAAGACAGCGAGATTCCAGCCCAGGCCTGACTCAGGATAGTTCCTGGTGGCACTGAGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CCA 72 bp | TGGGGAGGACCCAACACTGAGAAGAAAGCAGCAATTTaGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCTC | + |
Preference number: 3 (lower is better) Translates to: WGGPNTEKKAAI*PVSGECGAGLL Trigger: GAGGAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCTCAGTGTTGGGTCCTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CAA 90 bp | AACCGTAGCATGGAGGAACATAGAACAAAGCTCAGAAACAAAGACCCAGACCCGGCCCCCATCTGGGGCTaGGCAGGACTGAGGGTGTGG | + |
Preference number: 3 (lower is better) Translates to: NRSMEEHRTKLRNKDPDPAPIWG*AGLRVW Trigger: CCACACCCTCAGTCCTGCCAAGCCCCAGATGGGGGC...CGGGTCTGGGTCTTTGTTTCTGAGCTTTGTTCTATGTTCCTCCATGCTACGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR TCA 72 bp | AAAGGAGCGGTCCTGGTAACTGTAGGAGAGGTCCCCTaGACCTGCGCTTTCAACCAACCCGTCAGTGGATCC | + |
Preference number: 3 (lower is better) Translates to: KGAVLVTVGEVP*TCAFNQPVSGS Trigger: GGATCCACTGACGGGTTGGTTGAAAGCGCAGGTTCAGGGGACCTCTCCTACAGTTACCAGGACCGCTCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162379.2 |
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3UTR CCA 72 bp | ATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTaGTGGAGTGAAGGGCAACCAAGTACCAAAGTGGCC | + |
Preference number: 3 (lower is better) Translates to: IPGAHSWHLEWT*WSEGQPSTKVA Trigger: GGCCACTTTGGTACTTGGTTGCCCTTCACTCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CAA 90 bp | GTGTTTGGGGATCCCACACTCCAGAGCATAGAGGTCATTCCGCAGCAGGGCCCGAGGATGTACCCCAAGTaGCTGAGGATGTTGTTGAAG | + |
Preference number: 3 (lower is better) Translates to: VFGDPTLQSIEVIPQQGPRMYPK*LRMLLK Trigger: CTTCAACAACATCCTCAGCAACTTGGGGTACATCCT...CGGGCCCTGCTGCGGAATGACCTCTATGCTCTGGAGTGTGGGATCCCCAAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
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3UTR GCA 72 bp | CGTCTGGTAGGTGATCACCAGCTGCACCACAGGAAGTaGGTAGAAGACCGCAATGGTGGCTATGTTCCTGAG | + |
Preference number: 3 (lower is better) Translates to: RLVGDHQLHHRK*VEDRNGGYVPE Trigger: CTCAGGAACATAGCCACCATTGCGGTCTTCTACGCACTTCCTGTGGTGCAGCTGGTGATCACCTACCAGACG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
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3UTR CCA 72 bp | GTGGAGAGAAGGAAACACATTCCTGGGGCCCACTCTTaGCATCTGGAATGGACCTGGTGGAGTGAAGGGCAA | + |
Preference number: 3 (lower is better) Translates to: VERRKHIPGAHS*HLEWTWWSEGQ Trigger: TTGCCCTTCACTCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTCTCTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CCA 72 bp | GAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTaGAATGGACCTGGTGGAGTGAAGGGCAACCAAGTA | + |
Preference number: 3 (lower is better) Translates to: EGNTFLGPTLGI*NGPGGVKGNQV Trigger: TACTTGGTTGCCCTTCACTCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CAA 90 bp | ATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCAGAAGAAAGCAGCAATTaGGCCAGTGTCTGGGGAATG | + |
Preference number: 3 (lower is better) Translates to: IRRLNLGWPSLLKSQLQAEESSN*ASVWGM Trigger: CATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTC...TGCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR-3UTR CAA 90 bp | AAAGTGTTTGGGGATCCCACACTCCAGAGCATAGAGGTCATTCCGCAGCAGGGCAAGTTGCTGAGGATGTaGTTGAAGGCGCTGAGGTTG | + |
Preference number: 3 (lower is better) Translates to: KVFGDPTLQSIEVIPQQGKLLRM*LKALRL Trigger: CAACCTCAGCGCCTTCAACAACATCCTCAGCAACTT...GCCCTGCTGCGGAATGACCTCTATGCTCTGGAGTGTGGGATCCCCAAACACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
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3UTR TCA 72 bp | GGTGACTCTGTAAACGCCAAGGCTCTTAGGCCTACGTaGCTAACACAGAACTTGGCTAAATACTGGACGGAA | + |
Preference number: 3 (lower is better) Translates to: GDSVNAKALRPT*LTQNLAKYWTE Trigger: TTCCGTCCAGTATTTAGCCAAGTTCTGTGTTAGTCACGTAGGCCTAAGAGCCTTGGCGTTTACAGAGTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR TCA 72 bp | AGTAAGACCCCAAATCCCAGGTCTGGTTGTCTTTATTaGATGTACTCGTTCATAGAAAACAATTGCAACCGT | + |
Preference number: 3 (lower is better) Translates to: SKTPNPRSGCLY*MYSFIENNCNR Trigger: ACGGTTGCAATTGTTTTCTATGAACGAGTACATTCAATAAAGACAACCAGACCTGGGATTTGGGGTCTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038488.17 |
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CDS-3UTR TCA 90 bp | AGCAGGCCTCCTCCTCCGCAGAGGCAACTCCAAGGCTCAGTGCCACCAGGAACTGCCAAGACCCGGGCGTaGCCACTTTCTGGGCAGGCT | + |
Preference number: 4 (lower is better) Translates to: SRPPPPQRQLQGSVPPGTAKTRA*PLSGQA Trigger: AGCCTGCCCAGAAAGTGGTCACGCCCGGGTCTTGGC...AGTTCCTGGTGGCACTGAGCCTTGGAGTTGCCTCTGCGGAGGAGGAGGCCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CAA 72 bp | AGCACAGGTCAGGGAGGAGGGTCGTACCTAGGCCCCTaGCAGGCCTTAGCACCGAAAGCCTGGCACCAGCTG | + |
Preference number: 4 (lower is better) Translates to: STGQGGGSYLGP*QALAPKAWHQL Trigger: CAGCTGGTGCCAGGCTTTCGGTGCTAAGGCCTGCAAGGGGCCTAGGTACGACCCTCCTCCCTGACCTGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | GGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTTCTGCGAGACGTTCTTaGGCCCCAGGGCCCCCAGGT | + |
Preference number: 4 (lower is better) Translates to: GVKGNQVPKWPGAWSWVTSARRS*APGPPG Trigger: ACCTGGGGGCCCTGGGGCCCAAGAACGTCTCGCAGA...AGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | TCCAAGCACAGGTCAGGGAGGAGGGTCGTACCTAGGCCCCTTGCAGGCCTTAGCCTTCCACGGAGCTCATaGAGTCCAGTCGAGGCCGAG | + |
Preference number: 4 (lower is better) Translates to: SKHRSGRRVVPRPLAGLSLPRSS*SPVEAE Trigger: CTCGGCCTCGACTGGACTCCATGAGCTCCGTGGAAG...GCTAAGGCCTGCAAGGGGCCTAGGTACGACCCTCCTCCCTGACCTGTGCTTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | CTTCCCACCAACCCTAGTGCTGGCATCATTCTAGTGGCTGGTGGGATGAGGTGGCACAGCTGCCGCATCTaGCCAGAGGGAAGGCGCCGC | + |
Preference number: 4 (lower is better) Translates to: LPTNPSAGIILVAGGMRWHSCRI*PEGRRR Trigger: GCGGCGCCTTCCCTCTGGCCAGATGCGGCAGCTGTG...CCACCTCATCCCACCAGCCACTAGAATGATGCCAGCACTAGGGTTGGTGGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114573.9 |
||
CDS-3UTR TCA 90 bp | GGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTGGCACTGCCAGGAAATaGATCAGCCAAGACCCGGGC | + |
Preference number: 4 (lower is better) Translates to: GVKGNQVPKWPGAWSWVTGTARK*ISQDPG Trigger: GCCCGGGTCTTGGCTGATTCATTTCCTGGCAGTGCC...AGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
||
CDS-3UTR GCA 90 bp | GGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTTGTAAAGGGGCCCGCTaGACTGCCGGATGCAGTCTG | + |
Preference number: 4 (lower is better) Translates to: GVKGNQVPKWPGAWSWVTCKGAR*TAGCSL Trigger: CAGACTGCATCCGGCAGTGCAGCGGGCCCCTTTACA...AGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
||
CDS-3UTR CCA 90 bp | AGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCTCCTCTGCGAGACGTTCTTaGGCCCCAGGGCCCCCAGGT | + |
Preference number: 4 (lower is better) Translates to: RRKQQFGQCLGNAEQASSSARRS*APGPPG Trigger: ACCTGGGGGCCCTGGGGCCCAAGAACGTCTCGCAGA...GGAGGAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
||
CDS-3UTR CCA 90 bp | GGTGACTCTGTAAACGCCAAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACGGCGTGACCACTTTCTaGGCAGGCTCGGTCTATGGC | + |
Preference number: 4 (lower is better) Translates to: GDSVNAKDQNGQGPELGDGVTTF*AGSVYG Trigger: GCCATAGACCGAGCCTGCCCAGAAAGTGGTCACGCC...GTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTTGGCGTTTACAGAGTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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3UTR CAA 72 bp | CCCAGCAGGATGTACCCCAAGTTGCTGAGGATGTTGTaGAAGGCGCTGAGGTTGCCCAGCGGGTGGGCACAG | + |
Preference number: 4 (lower is better) Translates to: PSRMYPKLLRML*KALRLPSGWAQ Trigger: CTGTGCCCACCCGCTGGGCAACCTCAGCGCCTTCAACAACATCCTCAGCAACTTGGGGTACATCCTGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
||
3UTR CAA 72 bp | AGCCCCAGCAGGATGTACCCCAAGTTGCTGAGGATGTaGTTGAAGGCGCTGAGGTTGCCCAGCGGGTGGGCA | + |
Preference number: 4 (lower is better) Translates to: SPSRMYPKLLRM*LKALRLPSGWA Trigger: TGCCCACCCGCTGGGCAACCTCAGCGCCTTCAACAACATCCTCAGCAACTTGGGGTACATCCTGCTGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
||
CDS-3UTR TCA 90 bp | CAGATGGACAGACTAGGGTCCTGGGGAGGACCCAACACTGAGAAGAAAGCAGCAGCCAAGACCCGGGCGTaGCCACTTTCTGGGCAGGCT | + |
Preference number: 4 (lower is better) Translates to: QMDRLGSWGGPNTEKKAAAKTRA*PLSGQA Trigger: AGCCTGCCCAGAAAGTGGTCACGCCCGGGTCTTGGC...TGCTGCTTTCTTCTCAGTGTTGGGTCCTCCCCAGGACCCTAGTCTGTCCATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | ACTGAGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCAGGGAAGGCGCCGCTTaGACTGGTCGTGCCCCTGGT | + |
Preference number: 4 (lower is better) Translates to: TEKKAAIWPVSGECGAGLREGAA*TGRAPG Trigger: ACCAGGGGCACGACCAGTTCAAGCGGCGCCTTCCCT...GAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114573.9 |
||
CDS-3UTR GCA 90 bp | TGGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACAACTCCGCGTCTTTCTaGGAGACGTTCTTGGGCCCC | + |
Preference number: 4 (lower is better) Translates to: WSEGQPSTKVARGLELGDNSASF*ETFLGP Trigger: GGGGCCCAAGAACGTCTCGCAGAAAGACGCGGAGTT...GTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
||
CDS-3UTR CCA 90 bp | GTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTCTGCAAAGGAGCGGTCCATaGCAATGCACAGCTGCCGCA | + |
Preference number: 4 (lower is better) Translates to: VKGNQVPKWPGAWSWVTLQRSGP*QCTAAA Trigger: TGCGGCAGCTGTGCATTGCCATGGACCGCTCCTTTG...CAGAGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114573.9 |
||
3UTR CAA 72 bp | TATCCTGAGTCAGGCCTGGGCTGGAATCTCGCTGTCTaGCCACGACATCCAATGCTGGGCAGCAGAGCTGGG | + |
Preference number: 4 (lower is better) Translates to: YPESGLGWNLAV*PRHPMLGSRAG Trigger: CCCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCCAGCCCAGGCCTGACTCAGGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
||
CDS-3UTR TCA 90 bp | AGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCTCCGGCACTGCCAGGAAATaGATCAGCCAAGACCCGGGC | + |
Preference number: 4 (lower is better) Translates to: RRKQQFGQCLGNAEQASSGTARK*ISQDPG Trigger: GCCCGGGTCTTGGCTGATTCATTTCCTGGCAGTGCC...GGAGGAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | GGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTTGTCCTGGTTCCCTGTaGCATTCACCACCGTCTGGT | + |
Preference number: 4 (lower is better) Translates to: GVKGNQVPKWPGAWSWVTCPGSL*HSPPSG Trigger: ACCAGACGGTGGTGAATGTCACAGGGAACCAGGACA...AGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | TCCAAGCACAGGTCAGGGAGGAGGGTCGTACCTAGGCCCCTTGCAGGCCTTAGCCAGACTCATTCTTGGTaGGGGGCTGACACAGAGTTC | + |
Preference number: 4 (lower is better) Translates to: SKHRSGRRVVPRPLAGLSQTHSW*GADTEF Trigger: GAACTCTGTGTCAGCCCCCCACCAAGAATGAGTCTG...GCTAAGGCCTGCAAGGGGCCTAGGTACGACCCTCCTCCCTGACCTGTGCTTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | CATCCTCTTCCACGGAGCTCATGGAGTCCAGTCGAGGCCGAGGACCCACTGCGTGGGCACAGGACATCTTaGATGGAGATGACTGAGCAG | + |
Preference number: 4 (lower is better) Translates to: HPLPRSSWSPVEAEDPLRGHRTS*MEMTEQ Trigger: CTGCTCAGTCATCTCCATCCAAGATGTCCTGTGCCC...ACGCAGTGGGTCCTCGGCCTCGACTGGACTCCATGAGCTCCGTGGAAGAGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162379.2 |
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CDS-3UTR CCA 90 bp | TGGAATCTCGCTGTCTTGCCACGACATCCAATGCTGGGCAGCAGAGCTGGGACTGGCGTGACCACTTTCTaGGCAGGCTCGGTCTATGGC | + |
Preference number: 4 (lower is better) Translates to: WNLAVLPRHPMLGSRAGTGVTTF*AGSVYG Trigger: GCCATAGACCGAGCCTGCCCAGAAAGTGGTCACGCC...AGTCCCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | GGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTCACGTGCTCAGTCCCTaGAAGAAGAAGAAGAGCGCG | + |
Preference number: 4 (lower is better) Translates to: GVKGNQVPKWPGAWSWVTHVLSP*KKKKSA Trigger: CGCGCTCTTCTTCTTCTTCCAGGGACTGAGCACGTG...AGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | TGGAATCTCGCTGTCTTGCCACGACATCCAATGCTGGGCAGCAGAGCTGGGACTCGCGGTTGTGCTCCCTaGACTCTGCGGGGGTTTTCT | + |
Preference number: 4 (lower is better) Translates to: WNLAVLPRHPMLGSRAGTRGCAP*TLRGFS Trigger: AGAAAACCCCCGCAGAGTCCAGGGAGCACAACCGCG...AGTCCCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | AGCAGGCCTCCTCCTCCGCAGAGGCAACTCCAAGGCTCAGTGCCACCAGGAACTACAGCTCTCCAGTCCTaGGCACAAAATTGTCCACAC | + |
Preference number: 4 (lower is better) Translates to: SRPPPPQRQLQGSVPPGTTALQS*AQNCPH Trigger: GTGTGGACAATTTTGTGCTCAGGACTGGAGAGCTGT...AGTTCCTGGTGGCACTGAGCCTTGGAGTTGCCTCTGCGGAGGAGGAGGCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | GGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTTCAGATGTGACAGCCTaGGAGACCAGCACTGACAGT | + |
Preference number: 4 (lower is better) Translates to: GVKGNQVPKWPGAWSWVTSDVTA*ETSTDS Trigger: ACTGTCAGTGCTGGTCTCTCAGGCTGTCACATCTGA...AGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | GAGAGAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGCCACCGTCTGGTAGGTaGTCACCAGCTGCACCACAG | + |
Preference number: 4 (lower is better) Translates to: ERRKHIPGAHSWHLEWTWPPSGR*SPAAPQ Trigger: CTGTGGTGCAGCTGGTGATCACCTACCAGACGGTGG...CCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | AAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTAAACGCCAAGGCTTGTAGGCACTGGCGTTaGTATCTGGGTGCCGCTTCT | + |
Preference number: 4 (lower is better) Translates to: KDQNGQGPELGDSVNAKACRHWR*YLGAAS Trigger: AGAAGCGGCACCCAGATATCAACGCCAGTGCCTACA...AGCCTTGGCGTTTACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | ATCCTCTTCCACGGAGCTCATGGAGTCCAGTCGAGGCCGAGGACCCACTGCGTCCTGCACAGTGATGGCTaGCTTCTTAGTCATCGTCTG | + |
Preference number: 4 (lower is better) Translates to: ILFHGAHGVQSRPRTHCVLHSDG*LLSHRL Trigger: CAGACGATGACTAAGAAGGCAGCCATCACTGTGCAG...GACGCAGTGGGTCCTCGGCCTCGACTGGACTCCATGAGCTCCGTGGAAGAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162379.2 |
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CDS-3UTR GCA 90 bp | GTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTCTGCCCCTCCATCATCAGTaGTGTGCCCATGGCGTAAAA | + |
Preference number: 4 (lower is better) Translates to: VKGNQVPKWPGAWSWVTLPLHHQ*CAHGVK Trigger: TTTTACGCCATGGGCACAGCACTGATGATGGAGGGG...CAGAGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | ATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCACCCAGACCACGGAGGTaGAGACGATGCAGAGCAGAG | + |
Preference number: 4 (lower is better) Translates to: IRRLNLGWPSLLKSQLQAPRPRR*RRCRAE Trigger: CTCTGCTCTGCATCGTCTGCACCTCCGTGGTCTGGG...TGCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | AGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCTCCAGAAGTCGAGGAGGATaGAGTCGCGGTTGTGCTCCC | + |
Preference number: 4 (lower is better) Translates to: RRKQQFGQCLGNAEQASSRSRGG*SRGCAP Trigger: GGGAGCACAACCGCGACTGCATCCTCCTCGACTTCT...GGAGGAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | CAGATGGACAGACTAGGGTCCTGGGGAGGACCCAACACTGAGAAGAAAGCAGCAAGCGGTCCATGGCAATaGACAGCTGCCGCATCTGGC | + |
Preference number: 4 (lower is better) Translates to: QMDRLGSWGGPNTEKKAASGPWQ*TAAASG Trigger: GCCAGATGCGGCAGCTGTGCATTGCCATGGACCGCT...TGCTGCTTTCTTCTCAGTGTTGGGTCCTCCCCAGGACCCTAGTCTGTCCATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | GTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTCTGGGGCACAGGACATCTTaGATGGAGATGACTGAGCAG | + |
Preference number: 4 (lower is better) Translates to: VKGNQVPKWPGAWSWVTLGHRTS*MEMTEQ Trigger: CTGCTCAGTCATCTCCATCCAAGATGTCCTGTGCCC...CAGAGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | GAGGTCATTCCGCAGCAGGGCCCGGTTATGATTGATCTCTCGCTGCAGGATGATCTTCCACGGAGCTCATaGAGTCCAGTCGAGGCCGAG | + |
Preference number: 4 (lower is better) Translates to: EVIPQQGPVMIDLSLQDDLPRSS*SPVEAE Trigger: CTCGGCCTCGACTGGACTCCATGAGCTCCGTGGAAG...ATCATCCTGCAGCGAGAGATCAATCATAACCGGGCCCTGCTGCGGAATGACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
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CDS-3UTR CCA 90 bp | TCCAAGCACAGGTCAGGGAGGAGGGTCGTACCTAGGCCCCTTGCAGGCCTTAGCACCCAAACATGGCAATaGAGGACAGGAAGTGCCAGA | + |
Preference number: 4 (lower is better) Translates to: SKHRSGRRVVPRPLAGLSTQTWQ*RTGSAR Trigger: TCTGGCACTTCCTGTCCTCCATTGCCATGTTTGGGT...GCTAAGGCCTGCAAGGGGCCTAGGTACGACCCTCCTCCCTGACCTGTGCTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | ATACTGGACGGAAACTCAGAAACCAGCCCTGAGTCCTTTGGTGAGACAGGGCCACCACCGTCTGGTAGGTaGTCACCAGCTGCACCACAG | + |
Preference number: 4 (lower is better) Translates to: ILDGNSETSPESFGETGPPPSGR*SPAAPQ Trigger: CTGTGGTGCAGCTGGTGATCACCTACCAGACGGTGG...TGGCCCTGTCTCACCAAAGGACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | TCCAAGCACAGGTCAGGGAGGAGGGTCGTACCTAGGCCCCTTGCAGGCCTTAGCAAGGTCTTCTTCCTTTaGCTCCAGTTCTCCCAACAG | + |
Preference number: 4 (lower is better) Translates to: SKHRSGRRVVPRPLAGLSKVFFL*LQFSQQ Trigger: CTGTTGGGAGAACTGGAGGCAAAGGAAGAAGACCTT...GCTAAGGCCTGCAAGGGGCCTAGGTACGACCCTCCTCCCTGACCTGTGCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | GGTGACTCTGTAAACGCCAAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACACGTTTGTCCTTTCGTaGCAGATCAGCCACACAGAG | + |
Preference number: 4 (lower is better) Translates to: GDSVNAKDQNGQGPELGDTFVLS*QISHTE Trigger: CTCTGTGTGGCTGATCTGGCACGAAAGGACAAACGT...GTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTTGGCGTTTACAGAGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | GGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTACGTTTGTCCTTTCGTaGCAGATCAGCCACACAGAG | + |
Preference number: 4 (lower is better) Translates to: GVKGNQVPKWPGAWSWVTTFVLS*QISHTE Trigger: CTCTGTGTGGCTGATCTGGCACGAAAGGACAAACGT...AGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | AAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTAAACGCCAAGGCTCTGCACCACAGGAAGTaGGTAGAAGACCGCAATGGT | + |
Preference number: 4 (lower is better) Translates to: KDQNGQGPELGDSVNAKALHHRK*VEDRNG Trigger: ACCATTGCGGTCTTCTACGCACTTCCTGTGGTGCAG...AGCCTTGGCGTTTACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | AAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTAAACGCCAAGGCTGCAGCAGGTTGCAGATaGCAATTGCCAGCAAGTAGG | + |
Preference number: 4 (lower is better) Translates to: KDQNGQGPELGDSVNAKAAAGCR*QLPASR Trigger: CCTACTTGCTGGCAATTGGCATCTGCAACCTGCTGC...AGCCTTGGCGTTTACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | CAGATGGACAGACTAGGGTCCTGGGGAGGACCCAACACTGAGAAGAAAGCAGCAAGAAGTCGAGGAGGATaGAGTCGCGGTTGTGCTCCC | + |
Preference number: 4 (lower is better) Translates to: QMDRLGSWGGPNTEKKAARSRGG*SRGCAP Trigger: GGGAGCACAACCGCGACTGCATCCTCCTCGACTTCT...TGCTGCTTTCTTCTCAGTGTTGGGTCCTCCCCAGGACCCTAGTCTGTCCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | AGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCTCCGGCAGGCTCGGTCTATaGCCAACAGCAAGGTCTTCT | + |
Preference number: 4 (lower is better) Translates to: RRKQQFGQCLGNAEQASSGRLGL*PTARSS Trigger: AGAAGACCTTGCTGTTGGCCATAGACCGAGCCTGCC...GGAGGAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | TGGAATCTCGCTGTCTTGCCACGACATCCAATGCTGGGCAGCAGAGCTGGGACTGGCAGGCTCGGTCTATaGCCAACAGCAAGGTCTTCT | + |
Preference number: 4 (lower is better) Translates to: WNLAVLPRHPMLGSRAGTGRLGL*PTARSS Trigger: AGAAGACCTTGCTGTTGGCCATAGACCGAGCCTGCC...AGTCCCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | AGGGAAGGGATGGGCAGAATGCAAGGCATGAAATGGGACAGGACATTGCCTTCCCTTCCACGGAGCTCATaGAGTCCAGTCGAGGCCGAG | + |
Preference number: 4 (lower is better) Translates to: REGMGRMQGMKWDRTLPSLPRSS*SPVEAE Trigger: CTCGGCCTCGACTGGACTCCATGAGCTCCGTGGAAG...GGAAGGCAATGTCCTGTCCCATTTCATGCCTTGCATTCTGCCCATCCCTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | ATACTGGACGGAAACTCAGAAACCAGCCCTGAGTCCTTTGGTGAGACAGGGCCACGCGGTTGTGCTCCCTaGACTCTGCGGGGGTTTTCT | + |
Preference number: 4 (lower is better) Translates to: ILDGNSETSPESFGETGPRGCAP*TLRGFS Trigger: AGAAAACCCCCGCAGAGTCCAGGGAGCACAACCGCG...TGGCCCTGTCTCACCAAAGGACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | GGTGACTCTGTAAACGCCAAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACACCCAAACATGGCAATaGAGGACAGGAAGTGCCAGA | + |
Preference number: 4 (lower is better) Translates to: GDSVNAKDQNGQGPELGDTQTWQ*RTGSAR Trigger: TCTGGCACTTCCTGTCCTCCATTGCCATGTTTGGGT...GTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTTGGCGTTTACAGAGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | AGGGAAGGGATGGGCAGAATGCAAGGCATGAAATGGGACAGGACATTGCCTTCCAGCAGGGCCCGGTTATaGTTGATCTCTCGCTGCAGG | + |
Preference number: 4 (lower is better) Translates to: REGMGRMQGMKWDRTLPSSRARL*LISRCR Trigger: CCTGCAGCGAGAGATCAATCATAACCGGGCCCTGCT...GGAAGGCAATGTCCTGTCCCATTTCATGCCTTGCATTCTGCCCATCCCTTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
||
CDS-3UTR TCA 90 bp | GGGCTGGAATCTCGCTGTCTTGCCACGACATCCAATGCTGGGCAGCAGAGCTGGAGGGTGGAGATGATGTaGATGACGGAGAAGACAATC | + |
Preference number: 4 (lower is better) Translates to: GLESRCLATTSNAGQQSWRVEMM*MTEKTI Trigger: GATTGTCTTCTCCGTCATTCACATCATCTCCACCCT...CCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | TCCAAGCACAGGTCAGGGAGGAGGGTCGTACCTAGGCCCCTTGCAGGCCTTAGCGTTGCAGATGCCAATTaGCAGCAAGTAGGAAGCAAA | + |
Preference number: 4 (lower is better) Translates to: SKHRSGRRVVPRPLAGLSVADAN*QQVGSK Trigger: TTTGCTTCCTACTTGCTGGCAATTGGCATCTGCAAC...GCTAAGGCCTGCAAGGGGCCTAGGTACGACCCTCCTCCCTGACCTGTGCTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | GATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCGCAGCAGGTTGCAGATaGCAATTGCCAGCAAGTAGG | + |
Preference number: 4 (lower is better) Translates to: DQKTQLGLALTAEEPAPSAAGCR*QLPASR Trigger: CCTACTTGCTGGCAATTGGCATCTGCAACCTGCTGC...GCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | TCTTGGCATCTGGAATGGACCTGGTGGAGTGAAGGGCAACCAAGTACCAAAGTGCCCAGACCACGGAGGTaGAGACGATGCAGAGCAGAG | + |
Preference number: 4 (lower is better) Translates to: SWHLEWTWWSEGQPSTKVPRPRR*RRCRAE Trigger: CTCTGCTCTGCATCGTCTGCACCTCCGTGGTCTGGG...CACTTTGGTACTTGGTTGCCCTTCACTCCACCAGGTCCATTCCAGATGCCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | AGGGAAGGGATGGGCAGAATGCAAGGCATGAAATGGGACAGGACATTGCCTTCCATGGCAATGCACAGCTaGCGCATCTGGCCAGAGGGA | + |
Preference number: 4 (lower is better) Translates to: REGMGRMQGMKWDRTLPSMAMHS*RIWPEG Trigger: TCCCTCTGGCCAGATGCGGCAGCTGTGCATTGCCAT...GGAAGGCAATGTCCTGTCCCATTTCATGCCTTGCATTCTGCCCATCCCTTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | TCTGTAAACGCCAAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTAGGGCACAGGACATCTTaGATGGAGATGACTGAGCAG | + |
Preference number: 4 (lower is better) Translates to: SVNAKDQNGQGPELGDSVGHRTS*MEMTEQ Trigger: CTGCTCAGTCATCTCCATCCAAGATGTCCTGTGCCC...TACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTTGGCGTTTACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | AGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCTCCACAGCTCTCCAGTCCTaGGCACAAAATTGTCCACAC | + |
Preference number: 4 (lower is better) Translates to: RRKQQFGQCLGNAEQASSTALQS*AQNCPH Trigger: GTGTGGACAATTTTGTGCTCAGGACTGGAGAGCTGT...GGAGGAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | TGGAATCTCGCTGTCTTGCCACGACATCCAATGCTGGGCAGCAGAGCTGGGACTTCTTGGAGGTCACCTTaGCAATTACCGAGTCCACAC | + |
Preference number: 4 (lower is better) Translates to: WNLAVLPRHPMLGSRAGTSWRSP*QLPSPH Trigger: GTGTGGACTCGGTAATTGTCAAGGTGACCTCCAAGA...AGTCCCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | AGCAGGCCTCCTCCTCCGCAGAGGCAACTCCAAGGCTCAGTGCCACCAGGAACTAATGACGTTTTTGTCTaGGTCGATGTCAGTCAGTGT | + |
Preference number: 4 (lower is better) Translates to: SRPPPPQRQLQGSVPPGTNDVFV*VDVSQC Trigger: ACACTGACTGACATCGACTCAGACAAAAACGTCATT...AGTTCCTGGTGGCACTGAGCCTTGGAGTTGCCTCTGCGGAGGAGGAGGCCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | AGCTACAGACCCAGGGAGAGCTTAGGTCCTGGTGATGGACAAAGAATCAGGCACTGTCCTGGTTCCCTGTaGCATTCACCACCGTCTGGT | + |
Preference number: 4 (lower is better) Translates to: SYRPRESLGPGDGQRIRHCPGSL*HSPPSG Trigger: ACCAGACGGTGGTGAATGTCACAGGGAACCAGGACA...GTGCCTGATTCTTTGTCCATCACCAGGACCTAAGCTCTCCCTGGGTCTGTAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | TCTTGGCATCTGGAATGGACCTGGTGGAGTGAAGGGCAACCAAGTACCAAAGTGAGCAGGGCCCGGTTATaGTTGATCTCTCGCTGCAGG | + |
Preference number: 4 (lower is better) Translates to: SWHLEWTWWSEGQPSTKVSRARL*LISRCR Trigger: CCTGCAGCGAGAGATCAATCATAACCGGGCCCTGCT...CACTTTGGTACTTGGTTGCCCTTCACTCCACCAGGTCCATTCCAGATGCCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | AGCTACAGACCCAGGGAGAGCTTAGGTCCTGGTGATGGACAAAGAATCAGGCACTGTAGGCACTGGCGTTaGTATCTGGGTGCCGCTTCT | + |
Preference number: 4 (lower is better) Translates to: SYRPRESLGPGDGQRIRHCRHWR*YLGAAS Trigger: AGAAGCGGCACCCAGATATCAACGCCAGTGCCTACA...GTGCCTGATTCTTTGTCCATCACCAGGACCTAAGCTCTCCCTGGGTCTGTAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | ACAAAGACCCAGACCCGCCTCTTCTCCCAGCCCAAGAGCTATAAAAACATGGTGAACTCCGCGTCTTTCTaGGAGACGTTCTTGGGCCCC | + |
Preference number: 4 (lower is better) Translates to: TKTQTRLFSQPKSYKNMVNSASF*ETFLGP Trigger: GGGGCCCAAGAACGTCTCGCAGAAAGACGCGGAGTT...CACCATGTTTTTATAGCTCTTGGGCTGGGAGAAGAGGCGGGTCTGGGTCTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | TGGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACAGAAGGACAAGAATATaGCCAGGCAAAAGAGCATCC | + |
Preference number: 4 (lower is better) Translates to: WSEGQPSTKVARGLELGDRRTRI*PGKRAS Trigger: GGATGCTCTTTTGCCTGGGCATATTCTTGTCCTTCT...GTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | ATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCACCTCGTAAGGGGCACTaGCAGGAAATGAATCAGCCA | + |
Preference number: 4 (lower is better) Translates to: IRRLNLGWPSLLKSQLQAPRKGH*QEMNQP Trigger: TGGCTGATTCATTTCCTGGCAGTGCCCCTTACGAGG...TGCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | AGGAAGTGCGTAGAAGACCGCAATGGTGGCTATGTTCCTGAGGGGGAAGGGCCAACGTTTGTCCTTTCGTaGCAGATCAGCCACACAGAG | + |
Preference number: 4 (lower is better) Translates to: RKCVEDRNGGYVPEGEGPTFVLS*QISHTE Trigger: CTCTGTGTGGCTGATCTGGCACGAAAGGACAAACGT...TGGCCCTTCCCCCTCAGGAACATAGCCACCATTGCGGTCTTCTACGCACTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
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CDS-3UTR GCA 90 bp | GGAGTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTGTTGCAGATGCCAATTaGCAGCAAGTAGGAAGCAAA | + |
Preference number: 4 (lower is better) Translates to: GVKGNQVPKWPGAWSWVTVADAN*QQVGSK Trigger: TTTGCTTCCTACTTGCTGGCAATTGGCATCTGCAAC...AGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | AGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCTCCACAACAGCCTCCTTCTaGCGGACCACAAACAGCAAA | + |
Preference number: 4 (lower is better) Translates to: RRKQQFGQCLGNAEQASSTTASF*RTTNSK Trigger: TTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGTTGT...GGAGGAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | GTGAAGGGCAACCAAGTACCAAAGTGGCCAGGGGCCTGGAGCTGGGTGACTCTGTATCAAACTGGAAGTTaGTGTAGTTGGGGCAGACGT | + |
Preference number: 4 (lower is better) Translates to: VKGNQVPKWPGAWSWVTLYQTGS*CSWGRR Trigger: ACGTCTGCCCCAACTACACCAACTTCCAGTTTGATA...CAGAGTCACCCAGCTCCAGGCCCCTGGCCACTTTGGTACTTGGTTGCCCTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | AGCTACAGACCCAGGGAGAGCTTAGGTCCTGGTGATGGACAAAGAATCAGGCACCACGTGCTCAGTCCCTaGAAGAAGAAGAAGAGCGCG | + |
Preference number: 4 (lower is better) Translates to: SYRPRESLGPGDGQRIRHHVLSP*KKKKSA Trigger: CGCGCTCTTCTTCTTCTTCCAGGGACTGAGCACGTG...GTGCCTGATTCTTTGTCCATCACCAGGACCTAAGCTCTCCCTGGGTCTGTAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | AGCTACAGACCCAGGGAGAGCTTAGGTCCTGGTGATGGACAAAGAATCAGGCACTTGGATGGAGATGACTaGGCAGGGGAAGGCCTTCTT | + |
Preference number: 4 (lower is better) Translates to: SYRPRESLGPGDGQRIRHLDGDD*AGEGLL Trigger: AAGAAGGCCTTCCCCTGCTCAGTCATCTCCATCCAA...GTGCCTGATTCTTTGTCCATCACCAGGACCTAAGCTCTCCCTGGGTCTGTAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | AAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTAAACGCCAAGGCTTCTGGTACATGCCAATaGAGGCTACATTGTTGTCCA | + |
Preference number: 4 (lower is better) Translates to: KDQNGQGPELGDSVNAKASGTCQ*RLHCCP Trigger: TGGACAACAATGTAGCCTTCATTGGCATGTACCAGA...AGCCTTGGCGTTTACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | ACTGAGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCTGCACAGTGATGGCTaGCTTCTTAGTCATCGTCTG | + |
Preference number: 4 (lower is better) Translates to: TEKKAAIWPVSGECGAGLLHSDG*LLSHRL Trigger: CAGACGATGACTAAGAAGGCAGCCATCACTGTGCAG...GAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | ACTGAGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCCACATAGAAGCTGTTaGTGGGGAAGTCTTTCCGCT | + |
Preference number: 4 (lower is better) Translates to: TEKKAAIWPVSGECGAGLPHRSC*WGSLSA Trigger: AGCGGAAAGACTTCCCCAGCAACAGCTTCTATGTGG...GAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | GAGAGAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGCCACATAGAAGCTGTTaGTGGGGAAGTCTTTCCGCT | + |
Preference number: 4 (lower is better) Translates to: ERRKHIPGAHSWHLEWTWPHRSC*WGSLSA Trigger: AGCGGAAAGACTTCCCCAGCAACAGCTTCTATGTGG...CCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | AGGGAAGGGATGGGCAGAATGCAAGGCATGAAATGGGACAGGACATTGCCTTCCCCTCGTAAGGGGCACTaGCAGGAAATGAATCAGCCA | + |
Preference number: 4 (lower is better) Translates to: REGMGRMQGMKWDRTLPSPRKGH*QEMNQP Trigger: TGGCTGATTCATTTCCTGGCAGTGCCCCTTACGAGG...GGAAGGCAATGTCCTGTCCCATTTCATGCCTTGCATTCTGCCCATCCCTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | ATACTGGACGGAAACTCAGAAACCAGCCCTGAGTCCTTTGGTGAGACAGGGCCACCCCTCCATCATCAGTaGTGTGCCCATGGCGTAAAA | + |
Preference number: 4 (lower is better) Translates to: ILDGNSETSPESFGETGPPLHHQ*CAHGVK Trigger: TTTTACGCCATGGGCACAGCACTGATGATGGAGGGG...TGGCCCTGTCTCACCAAAGGACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | AACCGTAGCATGGAGGAACATAGAACAAAGCTCAGAAACAAAGACCCAGACCCGTGTAAAGGGGCCCGCTaGACTGCCGGATGCAGTCTG | + |
Preference number: 4 (lower is better) Translates to: NRSMEEHRTKLRNKDPDPCKGAR*TAGCSL Trigger: CAGACTGCATCCGGCAGTGCAGCGGGCCCCTTTACA...CGGGTCTGGGTCTTTGTTTCTGAGCTTTGTTCTATGTTCCTCCATGCTACGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | TCTCGCTGCAGGATGATGAGCAGGAAGAGCAGCCCCAGCAGGATGTACCCCAAGAATGACGTTTTTGTCTaGGTCGATGTCAGTCAGTGT | + |
Preference number: 4 (lower is better) Translates to: SRCRMMSRKSSPSRMYPKNDVFV*VDVSQC Trigger: ACACTGACTGACATCGACTCAGACAAAAACGTCATT...CTTGGGGTACATCCTGCTGGGGCTGCTCTTCCTGCTCATCATCCTGCAGCGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160618.8 |
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CDS-3UTR TCA 90 bp | AAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTAAACGCCAAGGCTCAGCAATCATGTACATaGAGGAGGTATCAAACTGGA | + |
Preference number: 4 (lower is better) Translates to: KDQNGQGPELGDSVNAKAQQSCT*RRYQTG Trigger: TCCAGTTTGATACCTCCTTCATGTACATGATTGCTG...AGCCTTGGCGTTTACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | GAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGTGGAAGGGTGGAGATGATGTaGATGACGGAGAAGACAATC | + |
Preference number: 4 (lower is better) Translates to: EGNTFLGPTLGIWNGPGGRVEMM*MTEKTI Trigger: GATTGTCTTCTCCGTCATTCACATCATCTCCACCCT...TCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | GAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGTGGAAAAGGCGCCCCTTTCTaGTTGTTCAGGACATTCACA | + |
Preference number: 4 (lower is better) Translates to: EGNTFLGPTLGIWNGPGGKGAPF*LFRTFT Trigger: TGTGAATGTCCTGAACAAGCAGAAAGGGGCGCCTTT...TCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | ATACTGGACGGAAACTCAGAAACCAGCCCTGAGTCCTTTGGTGAGACAGGGCCACTGCACAGTGATGGCTaGCTTCTTAGTCATCGTCTG | + |
Preference number: 4 (lower is better) Translates to: ILDGNSETSPESFGETGPLHSDG*LLSHRL Trigger: CAGACGATGACTAAGAAGGCAGCCATCACTGTGCAG...TGGCCCTGTCTCACCAAAGGACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | AGCTACAGACCCAGGGAGAGCTTAGGTCCTGGTGATGGACAAAGAATCAGGCACACAACAGCCTCCTTCTaGCGGACCACAAACAGCAAA | + |
Preference number: 4 (lower is better) Translates to: SYRPRESLGPGDGQRIRHTTASF*RTTNSK Trigger: TTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGTTGT...GTGCCTGATTCTTTGTCCATCACCAGGACCTAAGCTCTCCCTGGGTCTGTAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | AGCTACAGACCCAGGGAGAGCTTAGGTCCTGGTGATGGACAAAGAATCAGGCACGTGCCCTTGATCCACTaGCTCATCTTCCACAAAAGG | + |
Preference number: 4 (lower is better) Translates to: SYRPRESLGPGDGQRIRHVPLIH*LIFHKR Trigger: CCTTTTGTGGAAGATGAGCCAGTGGATCAAGGGCAC...GTGCCTGATTCTTTGTCCATCACCAGGACCTAAGCTCTCCCTGGGTCTGTAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | CAAAGGAGCGGTCCTGGTAACTGTAGGAGAGGTCCCCTGAACCTGCGCTTTCAATCTGGTACATGCCAATaGAGGCTACATTGTTGTCCA | + |
Preference number: 4 (lower is better) Translates to: QRSGPGNCRRGPLNLRFQSGTCQ*RLHCCP Trigger: TGGACAACAATGTAGCCTTCATTGGCATGTACCAGA...TTGAAAGCGCAGGTTCAGGGGACCTCTCCTACAGTTACCAGGACCGCTCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162379.2 |
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CDS-3UTR TCA 90 bp | CTTCCCACCAACCCTAGTGCTGGCATCATTCTAGTGGCTGGTGGGATGAGGTGGCAGCAATCATGTACATaGAGGAGGTATCAAACTGGA | + |
Preference number: 4 (lower is better) Translates to: LPTNPSAGIILVAGGMRWQQSCT*RRYQTG Trigger: TCCAGTTTGATACCTCCTTCATGTACATGATTGCTG...CCACCTCATCCCACCAGCCACTAGAATGATGCCAGCACTAGGGTTGGTGGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | TCTTGGCATCTGGAATGGACCTGGTGGAGTGAAGGGCAACCAAGTACCAAAGTGCATAGAAGCTGTTGCTaGGGAAGTCTTTCCGCTGCA | + |
Preference number: 4 (lower is better) Translates to: SWHLEWTWWSEGQPSTKVHRSCC*GSLSAA Trigger: TGCAGCGGAAAGACTTCCCCAGCAACAGCTTCTATG...CACTTTGGTACTTGGTTGCCCTTCACTCCACCAGGTCCATTCCAGATGCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | ACTGAGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCTATCAAACTGGAAGTTaGTGTAGTTGGGGCAGACGT | + |
Preference number: 4 (lower is better) Translates to: TEKKAAIWPVSGECGAGLYQTGS*CSWGRR Trigger: ACGTCTGCCCCAACTACACCAACTTCCAGTTTGATA...GAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | GCTTTCAACCAACCCGTCAGTGGATCCGGAACCATTTTCAAAGGAGCCATAGTTTCAGATGTGACAGCCTaGGAGACCAGCACTGACAGT | + |
Preference number: 4 (lower is better) Translates to: AFNQPVSGSGTIFKGAIVSDVTA*ETSTDS Trigger: ACTGTCAGTGCTGGTCTCTCAGGCTGTCACATCTGA...AACTATGGCTCCTTTGAAAATGGTTCCGGATCCACTGACGGGTTGGTTGAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162379.2 |
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CDS-3UTR GCA 90 bp | ACAAAGACCCAGACCCGCCTCTTCTCCCAGCCCAAGAGCTATAAAAACATGGTGAAAGGCGCCCCTTTCTaGTTGTTCAGGACATTCACA | + |
Preference number: 4 (lower is better) Translates to: TKTQTRLFSQPKSYKNMVKGAPF*LFRTFT Trigger: TGTGAATGTCCTGAACAAGCAGAAAGGGGCGCCTTT...CACCATGTTTTTATAGCTCTTGGGCTGGGAGAAGAGGCGGGTCTGGGTCTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | CCTGCGCTTTCAACCAACCCGTCAGTGGATCCGGAACCATTTTCAAAGGAGCCAAGAAGGACAAGAATATaGCCAGGCAAAAGAGCATCC | + |
Preference number: 4 (lower is better) Translates to: PALSTNPSVDPEPFSKEPRRTRI*PGKRAS Trigger: GGATGCTCTTTTGCCTGGGCATATTCTTGTCCTTCT...TGGCTCCTTTGAAAATGGTTCCGGATCCACTGACGGGTTGGTTGAAAGCGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162379.2 |
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CDS-3UTR GCA 90 bp | AACCGTAGCATGGAGGAACATAGAACAAAGCTCAGAAACAAAGACCCAGACCCGCTGCACCACAGGAAGTaGGTAGAAGACCGCAATGGT | + |
Preference number: 4 (lower is better) Translates to: NRSMEEHRTKLRNKDPDPLHHRK*VEDRNG Trigger: ACCATTGCGGTCTTCTACGCACTTCCTGTGGTGCAG...CGGGTCTGGGTCTTTGTTTCTGAGCTTTGTTCTATGTTCCTCCATGCTACGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | TCTTGGCATCTGGAATGGACCTGGTGGAGTGAAGGGCAACCAAGTACCAAAGTGATGGAGGACAGGAAGTaGCAGATATCGTGGTCATCA | + |
Preference number: 4 (lower is better) Translates to: SWHLEWTWWSEGQPSTKVMEDRK*QISWSS Trigger: TGATGACCACGATATCTGGCACTTCCTGTCCTCCAT...CACTTTGGTACTTGGTTGCCCTTCACTCCACCAGGTCCATTCCAGATGCCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | CAGTGGATCCGGAACCATTTTCAAAGGAGCCATAGTTGTAACCCTCGTAAGGGGCATAGAAGCTGTTGCTaGGGAAGTCTTTCCGCTGCA | + |
Preference number: 4 (lower is better) Translates to: QWIRNHFQRSHSCNPRKGHRSCC*GSLSAA Trigger: TGCAGCGGAAAGACTTCCCCAGCAACAGCTTCTATG...CCCCTTACGAGGGTTACAACTATGGCTCCTTTGAAAATGGTTCCGGATCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162379.2 |
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CDS-3UTR TCA 90 bp | AACCGTAGCATGGAGGAACATAGAACAAAGCTCAGAAACAAAGACCCAGACCCGTCTTGGAGGTCACCTTaGCAATTACCGAGTCCACAC | + |
Preference number: 4 (lower is better) Translates to: NRSMEEHRTKLRNKDPDPSWRSP*QLPSPH Trigger: GTGTGGACTCGGTAATTGTCAAGGTGACCTCCAAGA...CGGGTCTGGGTCTTTGTTTCTGAGCTTTGTTCTATGTTCCTCCATGCTACGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | CTAACACAGAACTTGGCTAAATACTGGACGGAAACTCAGAAACCAGCCCTGAGTTCAGATGTGACAGCCTaGGAGACCAGCACTGACAGT | + |
Preference number: 4 (lower is better) Translates to: LTQNLAKYWTETQKPALSSDVTA*ETSTDS Trigger: ACTGTCAGTGCTGGTCTCTCAGGCTGTCACATCTGA...ACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTATTTAGCCAAGTTCTGTGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | TCTTGGCATCTGGAATGGACCTGGTGGAGTGAAGGGCAACCAAGTACCAAAGTGGTACTGGGGCTGGGCTaGAGTGGTATTAAAAGTAAA | + |
Preference number: 4 (lower is better) Translates to: SWHLEWTWWSEGQPSTKVVLGLG*SGIKSK Trigger: TTTACTTTTAATACCACTGCAGCCCAGCCCCAGTAC...CACTTTGGTACTTGGTTGCCCTTCACTCCACCAGGTCCATTCCAGATGCCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | GCTTTCAACCAACCCGTCAGTGGATCCGGAACCATTTTCAAAGGAGCCATAGTTCCACATAGAAGCTGTTaGTGGGGAAGTCTTTCCGCT | + |
Preference number: 4 (lower is better) Translates to: AFNQPVSGSGTIFKGAIVPHRSC*WGSLSA Trigger: AGCGGAAAGACTTCCCCAGCAACAGCTTCTATGTGG...AACTATGGCTCCTTTGAAAATGGTTCCGGATCCACTGACGGGTTGGTTGAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162379.2 |
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CDS-3UTR CCA 90 bp | AACCGTAGCATGGAGGAACATAGAACAAAGCTCAGAAACAAAGACCCAGACCCGGTGCCCTTGATCCACTaGCTCATCTTCCACAAAAGG | + |
Preference number: 4 (lower is better) Translates to: NRSMEEHRTKLRNKDPDPVPLIH*LIFHKR Trigger: CCTTTTGTGGAAGATGAGCCAGTGGATCAAGGGCAC...CGGGTCTGGGTCTTTGTTTCTGAGCTTTGTTCTATGTTCCTCCATGCTACGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CCA 90 bp | CGTCAGTGGATCCGGAACCATTTTCAAAGGAGCCATAGTTGTAACCCTCGTAAGGTGCCCTTGATCCACTaGCTCATCTTCCACAAAAGG | + |
Preference number: 4 (lower is better) Translates to: RQWIRNHFQRSHSCNPRKVPLIH*LIFHKR Trigger: CCTTTTGTGGAAGATGAGCCAGTGGATCAAGGGCAC...CTTACGAGGGTTACAACTATGGCTCCTTTGAAAATGGTTCCGGATCCACTGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162379.2 |
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CDS-3UTR CCA 90 bp | CTAACACAGAACTTGGCTAAATACTGGACGGAAACTCAGAAACCAGCCCTGAGTACTGGCGTTGATATCTaGGTGCCGCTTCTGGTAGAG | + |
Preference number: 4 (lower is better) Translates to: LTQNLAKYWTETQKPALSTGVDI*VPLLVE Trigger: CTCTACCAGAAGCGGCACCCAGATATCAACGCCAGT...ACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTATTTAGCCAAGTTCTGTGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | AACCGTAGCATGGAGGAACATAGAACAAAGCTCAGAAACAAAGACCCAGACCCGTCTGGTACATGCCAATaGAGGCTACATTGTTGTCCA | + |
Preference number: 4 (lower is better) Translates to: NRSMEEHRTKLRNKDPDPSGTCQ*RLHCCP Trigger: TGGACAACAATGTAGCCTTCATTGGCATGTACCAGA...CGGGTCTGGGTCTTTGTTTCTGAGCTTTGTTCTATGTTCCTCCATGCTACGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR TCA 90 bp | AACCGTAGCATGGAGGAACATAGAACAAAGCTCAGAAACAAAGACCCAGACCCGAATGACGTTTTTGTCTaGGTCGATGTCAGTCAGTGT | + |
Preference number: 4 (lower is better) Translates to: NRSMEEHRTKLRNKDPDPNDVFV*VDVSQC Trigger: ACACTGACTGACATCGACTCAGACAAAAACGTCATT...CGGGTCTGGGTCTTTGTTTCTGAGCTTTGTTCTATGTTCCTCCATGCTACGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR GCA 90 bp | CTAACACAGAACTTGGCTAAATACTGGACGGAAACTCAGAAACCAGCCCTGAGTAGAAGGACAAGAATATaGCCAGGCAAAAGAGCATCC | + |
Preference number: 4 (lower is better) Translates to: LTQNLAKYWTETQKPALSRRTRI*PGKRAS Trigger: GGATGCTCTTTTGCCTGGGCATATTCTTGTCCTTCT...ACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTATTTAGCCAAGTTCTGTGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS CCA 90 bp | CCGCGTAGGTGCGCTCAAACTCCGCGTCTTTCTGCGAGACGTTCTTaGGCCCCAGGGCCCCCAGGTGGCTCTCGACGGAGGCCACCAAGA | + |
Preference number: 5 (lower is better) Translates to: PRRCAQTPRLSARRS*APGPPGGSRRRPPR Trigger: TCTTGGTGGCCTCCGTCGAGAGCCACCTGGGGGCCCTGGGGCCCAAGAACGTCTCGCAGAAAGACGCGGAGTTTGAGCGCACCTACGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS GCA 90 bp | CGAGGACCCACTGCGTCAAAGGAGCGGTCCATGGCAATGCACAGCTaGCGCATCTGGCCAGAGGGAAGGCGCCGCTTGAACTGGTCGTGC | + |
Preference number: 5 (lower is better) Translates to: RGPTASKERSMAMHS*RIWPEGRRRLNWSC Trigger: GCACGACCAGTTCAAGCGGCGCCTTCCCTCTGGCCAGATGCGGCAGCTGTGCATTGCCATGGACCGCTCCTTTGACGCAGTGGGTCCTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114573.9 ENSMUST00000161606.8 ENSMUST00000162072.8 |
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CDS-3UTR CAA 90 bp | AGCAGGCCTCCTCCTCCGCAGAGGCAACTCCAAGGCTCAGTGCCACCAGGAACTTTGAAGGCGCTGAGGTaGCCCAGCGGGTGGGCACAG | + |
Preference number: 5 (lower is better) Translates to: SRPPPPQRQLQGSVPPGTLKALR*PSGWAQ Trigger: CTGTGCCCACCCGCTGGGCAACCTCAGCGCCTTCAA...AGTTCCTGGTGGCACTGAGCCTTGGAGTTGCCTCTGCGGAGGAGGAGGCCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS TCA 90 bp | TGGCAATGCACAGCTGCCGCATCTGGCCAGAGGGAAGGCGCCGCTTaGACTGGTCGTGCCCCTGGTAACTGTAGGAGAGGTCCCCTGAAC | + |
Preference number: 5 (lower is better) Translates to: WQCTAAASGQREGAA*TGRAPGNCRRGPLN Trigger: GTTCAGGGGACCTCTCCTACAGTTACCAGGGGCACGACCAGTTCAAGCGGCGCCTTCCCTCTGGCCAGATGCGGCAGCTGTGCATTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114573.9 ENSMUST00000161606.8 ENSMUST00000162072.8 |
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CDS-3UTR CAA 90 bp | AAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTAAACGCCAAGGCTTTGAAGGCGCTGAGGTaGCCCAGCGGGTGGGCACAG | + |
Preference number: 5 (lower is better) Translates to: KDQNGQGPELGDSVNAKALKALR*PSGWAQ Trigger: CTGTGCCCACCCGCTGGGCAACCTCAGCGCCTTCAA...AGCCTTGGCGTTTACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | AGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCTCCGAGGGAAGGCGCCGCTaGAACTGGTCGTGCCCCTGG | + |
Preference number: 5 (lower is better) Translates to: RRKQQFGQCLGNAEQASSEGRRR*NWSCPW Trigger: CCAGGGGCACGACCAGTTCAAGCGGCGCCTTCCCTC...GGAGGAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | ACTGAGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCTTCTGCGAGACGTTCTaGGGCCCCAGGGCCCCCAGG | + |
Preference number: 5 (lower is better) Translates to: TEKKAAIWPVSGECGAGLFCETF*GPRAPR Trigger: CCTGGGGGCCCTGGGGCCCAAGAACGTCTCGCAGAA...GAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCTCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS GCA 90 bp | ACAGCCTCCTTCTGGCGGACCACAAACAGCAAAGGCGCCCCTTTCTaGTTGTTCAGGACATTCACAGACACTCGCACACCCTCGGTCCGG | + |
Preference number: 5 (lower is better) Translates to: TASFWRTTNSKGAPF*LFRTFTDTRTPSVR Trigger: CCGGACCGAGGGTGTGCGAGTGTCTGTGAATGTCCTGAACAAGCAGAAAGGGGCGCCTTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS CCA 90 bp | CGATGTCAGTCAGTGTGTCGTAGTCATCCTCTTCCACGGAGCTCATaGAGTCCAGTCGAGGCCGAGGACCCACTGCGTCAAAGGAGCGGT | + |
Preference number: 5 (lower is better) Translates to: RCQSVCRSHPLPRSS*SPVEAEDPLRQRSG Trigger: ACCGCTCCTTTGACGCAGTGGGTCCTCGGCCTCGACTGGACTCCATGAGCTCCGTGGAAGAGGATGACTACGACACACTGACTGACATCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000160138.8 ENSMUST00000160618.8 ENSMUST00000161606.8 ENSMUST00000162072.8 ENSMUST00000162529.8 |
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CDS CCA 90 bp | GGTCATCAAAGAAGTCGAGGAGGATGCAGTCGCGGTTGTGCTCCCTaGACTCTGCGGGGGTTTTCTGCCACGTGCTCAGTCCCTGGAAGA | + |
Preference number: 5 (lower is better) Translates to: GHQRSRGGCSRGCAP*TLRGFSATCSVPGR Trigger: TCTTCCAGGGACTGAGCACGTGGCAGAAAACCCCCGCAGAGTCCAGGGAGCACAACCGCGACTGCATCCTCCTCGACTTCTTTGATGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | GAGAGAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGAGGATGCAGTCGCGGTaGTGCTCCCTGGACTCTGCG | + |
Preference number: 5 (lower is better) Translates to: ERRKHIPGAHSWHLEWTWRMQSR*CSLDSA Trigger: CGCAGAGTCCAGGGAGCACAACCGCGACTGCATCCT...CCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | GAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGTGGAAGGATGCAGTCGCGGTaGTGCTCCCTGGACTCTGCG | + |
Preference number: 5 (lower is better) Translates to: EGNTFLGPTLGIWNGPGGRMQSR*CSLDSA Trigger: CGCAGAGTCCAGGGAGCACAACCGCGACTGCATCCT...TCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS TCA 90 bp | CCGCTTGAACTGGTCGTGCCCCTGGTAACTGTAGGAGAGGTCCCCTaGACCTGCGCTTTCAACCAACCCGTCAGTGGATCCGGAACCATT | + |
Preference number: 5 (lower is better) Translates to: PLELVVPLVTVGEVP*TCAFNQPVSGSGTI Trigger: AATGGTTCCGGATCCACTGACGGGTTGGTTGAAAGCGCAGGTTCAGGGGACCTCTCCTACAGTTACCAGGGGCACGACCAGTTCAAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114573.9 ENSMUST00000161606.8 ENSMUST00000162072.8 |
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CDS CCA 90 bp | CCTCGAAGGATTAGGGGCACCTGGAAGGACACAACAGCCTCCTTCTaGCGGACCACAAACAGCAAAGGCGCCCCTTTCTGCTTGTTCAGG | + |
Preference number: 5 (lower is better) Translates to: PRRIRGTWKDTTASF*RTTNSKGAPFCLFR Trigger: CCTGAACAAGCAGAAAGGGGCGCCTTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGTTGTGTCCTTCCAGGTGCCCCTAATCCTTCGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS-3UTR CAA 90 bp | TGGAATCTCGCTGTCTTGCCACGACATCCAATGCTGGGCAGCAGAGCTGGGACTAAGGCCGTGTTCCCTTaGCCAAACACCACGCCCAGA | + |
Preference number: 5 (lower is better) Translates to: WNLAVLPRHPMLGSRAGTKAVFP*PNTTPR Trigger: TCTGGGCGTGGTGTTTGGCAAAGGGAACACGGCCTT...AGTCCCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | GATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCAAGGCCGTGTTCCCTTaGCCAAACACCACGCCCAGA | + |
Preference number: 5 (lower is better) Translates to: DQKTQLGLALTAEEPAPSKAVFP*PNTTPR Trigger: TCTGGGCGTGGTGTTTGGCAAAGGGAACACGGCCTT...GCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | AGCAGGCCTCCTCCTCCGCAGAGGCAACTCCAAGGCTCAGTGCCACCAGGAACTGGTTGCAGATGCCAATaGCCAGCAAGTAGGAAGCAA | + |
Preference number: 5 (lower is better) Translates to: SRPPPPQRQLQGSVPPGTGCRCQ*PASRKQ Trigger: TTGCTTCCTACTTGCTGGCAATTGGCATCTGCAACC...AGTTCCTGGTGGCACTGAGCCTTGGAGTTGCCTCTGCGGAGGAGGAGGCCTGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS GCA 90 bp | GGCAGGCTCGGTCTATGGCCAACAGCAAGGTCTTCTTCCTTTGCCTaGAGGAATTCAGGGGACAACTCCAGTTCTCCCAACAGGCCAGCA | + |
Preference number: 5 (lower is better) Translates to: GRLGLWPTARSSSFA*RNSGDNSSSPNRPA Trigger: TGCTGGCCTGTTGGGAGAACTGGAGTTGTCCCCTGAATTCCTGCAGGCAAAGGAAGAAGACCTTGCTGTTGGCCATAGACCGAGCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160138.8 |
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CDS GCA 90 bp | TCTGGGCAGGCTCGGTCTATGGCCAACAGCAAGGTCTTCTTCCTTTaGCTGCAGGAATTCAGGGGACAACTCCAGTTCTCCCAACAGGCC | + |
Preference number: 5 (lower is better) Translates to: SGQARSMANSKVFFL*LQEFRGQLQFSQQA Trigger: GGCCTGTTGGGAGAACTGGAGTTGTCCCCTGAATTCCTGCAGGCAAAGGAAGAAGACCTTGCTGTTGGCCATAGACCGAGCCTGCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160138.8 |
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CDS CCA 90 bp | TATGGAGGGGTGAGCCAAGGCCACTTTCTGGGCAGGCTCGGTCTATaGCCAACAGCAAGGTCTTCTTCCTTTGCCTGCAGGAATTCAGGG | + |
Preference number: 5 (lower is better) Translates to: YGGVSQGHFLGRLGL*PTARSSSFACRNSG Trigger: CCCTGAATTCCTGCAGGCAAAGGAAGAAGACCTTGCTGTTGGCCATAGACCGAGCCTGCCCAGAAAGTGGCCTTGGCTCACCCCTCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160138.8 |
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CDS-3UTR CAA 90 bp | TCCAAGCACAGGTCAGGGAGGAGGGTCGTACCTAGGCCCCTTGCAGGCCTTAGCAGGATGTACCCCAAGTaGCTGAGGATGTTGTTGAAG | + |
Preference number: 5 (lower is better) Translates to: SKHRSGRRVVPRPLAGLSRMYPK*LRMLLK Trigger: CTTCAACAACATCCTCAGCAACTTGGGGTACATCCT...GCTAAGGCCTGCAAGGGGCCTAGGTACGACCCTCCTCCCTGACCTGTGCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | TGGAATCTCGCTGTCTTGCCACGACATCCAATGCTGGGCAGCAGAGCTGGGACTGCAGCCAGCGACCAGTaGATAATGTTGCCCATGACC | + |
Preference number: 5 (lower is better) Translates to: WNLAVLPRHPMLGSRAGTAASDQ*IMLPMT Trigger: GGTCATGGGCAACATTATCAACTGGTCGCTGGCTGC...AGTCCCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS GCA 90 bp | CACGCCCAGAACGGAGAAGAAGATGACGATGGCCAAGCAGGCATATaGACTGTAGGCACTGGCGTTGATATCTGGGTGCCGCTTCTGGTA | + |
Preference number: 5 (lower is better) Translates to: HAQNGEEDDDGQAGI*TVGTGVDIWVPLLV Trigger: TACCAGAAGCGGCACCCAGATATCAACGCCAGTGCCTACAGTGCATATGCCTGCTTGGCCATCGTCATCTTCTTCTCCGTTCTGGGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | CTAACACAGAACTTGGCTAAATACTGGACGGAAACTCAGAAACCAGCCCTGAGTTTCTGCGAGACGTTCTaGGGCCCCAGGGCCCCCAGG | + |
Preference number: 5 (lower is better) Translates to: LTQNLAKYWTETQKPALSFCETF*GPRAPR Trigger: CCTGGGGGCCCTGGGGCCCAAGAACGTCTCGCAGAA...ACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTATTTAGCCAAGTTCTGTGTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | AGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCCTCCCAGGGGAAGGCCTTCTaGGAGGTCACCTTGACAATT | + |
Preference number: 5 (lower is better) Translates to: RRKQQFGQCLGNAEQASSQGKAF*EVTLTI Trigger: AATTGTCAAGGTGACCTCCAAGAAGGCCTTCCCCTG...GGAGGAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | ACTGAGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCTTGCTGAGGATGTTGTaGAAGGCGCTGAGGTTGCCC | + |
Preference number: 5 (lower is better) Translates to: TEKKAAIWPVSGECGAGLLLRML*KALRLP Trigger: GGGCAACCTCAGCGCCTTCAACAACATCCTCAGCAA...GAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS TCA 90 bp | CCCACCAACATAGGCCTCAGATGTGACAGCCTGAGAGACCAGCACTaGCAGTGTTTTCTGACGGTGCCCTTGATCCACTGGCTCATCTTC | + |
Preference number: 5 (lower is better) Translates to: PTNIGLRCDSLRDQH*QCFLTVPLIHWLIF Trigger: GAAGATGAGCCAGTGGATCAAGGGCACCGTCAGAAAACACTGTCAGTGCTGGTCTCTCAGGCTGTCACATCTGAGGCCTATGTTGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000161606.8 ENSMUST00000162072.8 ENSMUST00000162379.2 ENSMUST00000162529.8 |
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CDS-3UTR CAA 90 bp | AAGGACCAGAATGGCCAGGGGCCAGAGCTGGGTGACTCTGTAAACGCCAAGGCTAGTTCGTTCCACTTTTaGGTAGAGGTACTTCCGCTG | + |
Preference number: 5 (lower is better) Translates to: KDQNGQGPELGDSVNAKASSFHF*VEVLPL Trigger: CAGCGGAAGTACCTCTACCAAAAAGTGGAACGAACT...AGCCTTGGCGTTTACAGAGTCACCCAGCTCTGGCCCCTGGCCATTCTGGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | GAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGTGGAGTCCTGAGCACAAAATaGTCCACACGGTTGACTCGG | + |
Preference number: 5 (lower is better) Translates to: EGNTFLGPTLGIWNGPGGVLSTK*STRLTR Trigger: CCGAGTCAACCGTGTGGACAATTTTGTGCTCAGGAC...TCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | AGGGAAGGGATGGGCAGAATGCAAGGCATGAAATGGGACAGGACATTGCCTTCCTTGCTGAGGATGTTGTaGAAGGCGCTGAGGTTGCCC | + |
Preference number: 5 (lower is better) Translates to: REGMGRMQGMKWDRTLPSLLRML*KALRLP Trigger: GGGCAACCTCAGCGCCTTCAACAACATCCTCAGCAA...GGAAGGCAATGTCCTGTCCCATTTCATGCCTTGCATTCTGCCCATCCCTTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | CTTCCCACCAACCCTAGTGCTGGCATCATTCTAGTGGCTGGTGGGATGAGGTGGAAGTTGCTGAGGATGTaGTTGAAGGCGCTGAGGTTG | + |
Preference number: 5 (lower is better) Translates to: LPTNPSAGIILVAGGMRWKLLRM*LKALRL Trigger: CAACCTCAGCGCCTTCAACAACATCCTCAGCAACTT...CCACCTCATCCCACCAGCCACTAGAATGATGCCAGCACTAGGGTTGGTGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | GATCAGAAGACTCAACTTGGGCTGGCCCTCACTGCTGAAGAGCCAGCTCCAAGCGACCAGTTGATAATGTaGCCCATGACCAGAAGCACC | + |
Preference number: 5 (lower is better) Translates to: DQKTQLGLALTAEEPAPSDQLIM*PMTRST Trigger: GGTGCTTCTGGTCATGGGCAACATTATCAACTGGTC...GCTTGGAGCTGGCTCTTCAGCAGTGAGGGCCAGCCCAAGTTGAGTCTTCTGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | TGGAATCTCGCTGTCTTGCCACGACATCCAATGCTGGGCAGCAGAGCTGGGACTTTCTTGGAGGTCACCTaGACAATTACCGAGTCCACA | + |
Preference number: 5 (lower is better) Translates to: WNLAVLPRHPMLGSRAGTFLEVT*TITEST Trigger: TGTGGACTCGGTAATTGTCAAGGTGACCTCCAAGAA...AGTCCCAGCTCTGCTGCCCAGCATTGGATGTCGTGGCAAGACAGCGAGATTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS TCA 90 bp | GTCCAGATCATAGACAGGGCACAGGACATCTTGGATGGAGATGACTaGGCAGGGGAAGGCCTTCTTGGAGGTCACCTTGACAATTACCGA | + |
Preference number: 5 (lower is better) Translates to: VQIIDRAQDILDGDD*AGEGLLGGHLDNYR Trigger: TCGGTAATTGTCAAGGTGACCTCCAAGAAGGCCTTCCCCTGCTCAGTCATCTCCATCCAAGATGTCCTGTGCCCTGTCTATGATCTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS-3UTR CAA 90 bp | ACTGAGAAGAAAGCAGCAATTTGGCCAGTGTCTGGGGAATGCGGAGCAGGCCTCAGTTCGTTCCACTTTTaGGTAGAGGTACTTCCGCTG | + |
Preference number: 5 (lower is better) Translates to: TEKKAAIWPVSGECGAGLSSFHF*VEVLPL Trigger: CAGCGGAAGTACCTCTACCAAAAAGTGGAACGAACT...GAGGCCTGCTCCGCATTCCCCAGACACTGGCCAAATTGCTGCTTTCTTCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | ACAAAGACCCAGACCCGCCTCTTCTCCCAGCCCAAGAGCTATAAAAACATGGTGCAGGGGAAGGCCTTCTaGGAGGTCACCTTGACAATT | + |
Preference number: 5 (lower is better) Translates to: TKTQTRLFSQPKSYKNMVQGKAF*EVTLTI Trigger: AATTGTCAAGGTGACCTCCAAGAAGGCCTTCCCCTG...CACCATGTTTTTATAGCTCTTGGGCTGGGAGAAGAGGCGGGTCTGGGTCTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | GAAGGAAACACATTCCTGGGGCCCACTCTTGGCATCTGGAATGGACCTGGTGGAAGGATGTACCCCAAGTaGCTGAGGATGTTGTTGAAG | + |
Preference number: 5 (lower is better) Translates to: EGNTFLGPTLGIWNGPGGRMYPK*LRMLLK Trigger: CTTCAACAACATCCTCAGCAACTTGGGGTACATCCT...TCCACCAGGTCCATTCCAGATGCCAAGAGTGGGCCCCAGGAATGTGTTTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | AGCTACAGACCCAGGGAGAGCTTAGGTCCTGGTGATGGACAAAGAATCAGGCACGACCAGTTGATAATGTaGCCCATGACCAGAAGCACC | + |
Preference number: 5 (lower is better) Translates to: SYRPRESLGPGDGQRIRHDQLIM*PMTRST Trigger: GGTGCTTCTGGTCATGGGCAACATTATCAACTGGTC...GTGCCTGATTCTTTGTCCATCACCAGGACCTAAGCTCTCCCTGGGTCTGTAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | ATACTGGACGGAAACTCAGAAACCAGCCCTGAGTCCTTTGGTGAGACAGGGCCAGGTTGCAGATGCCAATaGCCAGCAAGTAGGAAGCAA | + |
Preference number: 5 (lower is better) Translates to: ILDGNSETSPESFGETGPGCRCQ*PASRKQ Trigger: TTGCTTCCTACTTGCTGGCAATTGGCATCTGCAACC...TGGCCCTGTCTCACCAAAGGACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS GCA 90 bp | ATTCACCACCGTCTGGTAGGTGATCACCAGCTGCACCACAGGAAGTaGGTAGAAGACCGCAATGGTGGCTATGTTCCAGAAGTAAATCTG | + |
Preference number: 5 (lower is better) Translates to: IHHRLVGDHQLHHRK*VEDRNGGYVPEVNL Trigger: CAGATTTACTTCTGGAACATAGCCACCATTGCGGTCTTCTACGCACTTCCTGTGGTGCAGCTGGTGATCACCTACCAGACGGTGGTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS GCA 90 bp | AGCAAAACCAGGAAGGACCCAAACATGGCAATGGAGGACAGGAAGTaGCAGATATCGTGGTCATCAAAGAAGTCGAGGAGGATGCAGTCG | + |
Preference number: 5 (lower is better) Translates to: SKTRKDPNMAMEDRK*QISWSSKKSRRMQS Trigger: CGACTGCATCCTCCTCGACTTCTTTGATGACCACGATATCTGGCACTTCCTGTCCTCCATTGCCATGTTTGGGTCCTTCCTGGTTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000159033.2 |
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CDS-3UTR CAA 90 bp | ATACTGGACGGAAACTCAGAAACCAGCCCTGAGTCCTTTGGTGAGACAGGGCCATTCTTGGAGGTCACCTaGACAATTACCGAGTCCACA | + |
Preference number: 5 (lower is better) Translates to: ILDGNSETSPESFGETGPFLEVT*TITEST Trigger: TGTGGACTCGGTAATTGTCAAGGTGACCTCCAAGAA...TGGCCCTGTCTCACCAAAGGACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS-3UTR CAA 90 bp | ACAAAGACCCAGACCCGCCTCTTCTCCCAGCCCAAGAGCTATAAAAACATGGTGAAGTTGCTGAGGATGTaGTTGAAGGCGCTGAGGTTG | + |
Preference number: 5 (lower is better) Translates to: TKTQTRLFSQPKSYKNMVKLLRM*LKALRL Trigger: CAACCTCAGCGCCTTCAACAACATCCTCAGCAACTT...CACCATGTTTTTATAGCTCTTGGGCTGGGAGAAGAGGCGGGTCTGGGTCTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS TCA 90 bp | ATTGTCCACACGGTTGACTCGGAGCTGGTAAGTGGTATTGACGGGTaGCAGGGTAGACACGTCCACATAGAAAAACTGGATCTCAGACTC | + |
Preference number: 5 (lower is better) Translates to: IVHTVDSELVSGIDG*QGRHVHIEKLDLRL Trigger: GAGTCTGAGATCCAGTTTTTCTATGTGGACGTGTCTACCCTGTCACCCGTCAATACCACTTACCAGCTCCGAGTCAACCGTGTGGACAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS CCA 90 bp | ACCGAGTCCACACCATCAGGAAACTCGTATTTGAAGTACTGGGGCTaGGCTGCAGTGGTATTAAAAGTAAACAGCTCTCCAGTCCTGAGC | + |
Preference number: 5 (lower is better) Translates to: TESTPSGNSYLKYWG*AAVVLKVNSSPVLS Trigger: GCTCAGGACTGGAGAGCTGTTTACTTTTAATACCACTGCAGCCCAGCCCCAGTACTTCAAATACGAGTTTCCTGATGGTGTGGACTCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS-3UTR CAA 90 bp | CTAACACAGAACTTGGCTAAATACTGGACGGAAACTCAGAAACCAGCCCTGAGTGCAGCCAGCGACCAGTaGATAATGTTGCCCATGACC | + |
Preference number: 5 (lower is better) Translates to: LTQNLAKYWTETQKPALSAASDQ*IMLPMT Trigger: GGTCATGGGCAACATTATCAACTGGTCGCTGGCTGC...ACTCAGGGCTGGTTTCTGAGTTTCCGTCCAGTATTTAGCCAAGTTCTGTGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS TCA 90 bp | ATCAGCCACACAGAGGTATTGCTTGGTTCGAATGACGTTTTTGTCTaGGTCGATGTCAGTCAGTGTGTCGTAGTCATCCTCTTCCACGGA | + |
Preference number: 5 (lower is better) Translates to: ISHTEVLLGSNDVFV*VDVSQCVVVILFHG Trigger: TCCGTGGAAGAGGATGACTACGACACACTGACTGACATCGACTCAGACAAAAACGTCATTCGAACCAAGCAATACCTCTGTGTGGCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000160138.8 ENSMUST00000160618.8 ENSMUST00000162072.8 |
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CDS GCA 90 bp | GTCCACACCATCAGGAAACTCGTATTTGAAGTACTGGGGCTGGGCTaGAGTGGTATTAAAAGTAAACAGCTCTCCAGTCCTGAGCACAAA | + |
Preference number: 5 (lower is better) Translates to: VHTIRKLVFEVLGLG*SGIKSKQLSSPEHK Trigger: TTTGTGCTCAGGACTGGAGAGCTGTTTACTTTTAATACCACTGCAGCCCAGCCCCAGTACTTCAAATACGAGTTTCCTGATGGTGTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS CCA 90 bp | ACAATTACCGAGTCCACACCATCAGGAAACTCGTATTTGAAGTACTaGGGCTGGGCTGCAGTGGTATTAAAAGTAAACAGCTCTCCAGTC | + |
Preference number: 5 (lower is better) Translates to: TITESTPSGNSYLKY*GWAAVVLKVNSSPV Trigger: GACTGGAGAGCTGTTTACTTTTAATACCACTGCAGCCCAGCCCCAGTACTTCAAATACGAGTTTCCTGATGGTGTGGACTCGGTAATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS CCA 72 bp | TGCGCTCAAACTCCGCGTCTTTCTGCGAGACGTTCTTaGGCCCCAGGGCCCCCAGGTGGCTCTCGACGGAGG | + |
Preference number: 6 (lower is better) Translates to: CAQTPRLSARRS*APGPPGGSRRR Trigger: CCTCCGTCGAGAGCCACCTGGGGGCCCTGGGGCCCAAGAACGTCTCGCAGAAAGACGCGGAGTTTGAGCGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS TCA 72 bp | AGACCCGGGCGTGACCTGAGGCTGGGCCGCACTGCCTaGGACATAGGGCAGTTTCCTGGTGTCTATGGAGGG | + |
Preference number: 6 (lower is better) Translates to: RPGRDLRLGRTA*DIGQFPGVYGG Trigger: CCCTCCATAGACACCAGGAAACTGCCCTATGTCTCAGGCAGTGCGGCCCAGCCTCAGGTCACGCCCGGGTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160138.8 ENSMUST00000162072.8 |
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CDS CCA 72 bp | AAGGAGCGGTCCATGGCAATGCACAGCTGCCGCATCTaGCCAGAGGGAAGGCGCCGCTTGAACTGGTCGTGC | + |
Preference number: 6 (lower is better) Translates to: KERSMAMHSCRI*PEGRRRLNWSC Trigger: GCACGACCAGTTCAAGCGGCGCCTTCCCTCTGGCCAGATGCGGCAGCTGTGCATTGCCATGGACCGCTCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114573.9 ENSMUST00000161606.8 ENSMUST00000162072.8 |
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CDS CCA 72 bp | GAGGCCGAGGACCCACTGCGTCAAAGGAGCGGTCCATaGCAATGCACAGCTGCCGCATCTGGCCAGAGGGAA | + |
Preference number: 6 (lower is better) Translates to: EAEDPLRQRSGP*QCTAAASGQRE Trigger: TTCCCTCTGGCCAGATGCGGCAGCTGTGCATTGCCATGGACCGCTCCTTTGACGCAGTGGGTCCTCGGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114573.9 ENSMUST00000161606.8 ENSMUST00000162072.8 |
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CDS TCA 72 bp | ACAGCTGCCGCATCTGGCCAGAGGGAAGGCGCCGCTTaGACTGGTCGTGCCCCTGGTAACTGTAGGAGAGGT | + |
Preference number: 6 (lower is better) Translates to: TAAASGQREGAA*TGRAPGNCRRG Trigger: ACCTCTCCTACAGTTACCAGGGGCACGACCAGTTCAAGCGGCGCCTTCCCTCTGGCCAGATGCGGCAGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114573.9 ENSMUST00000161606.8 ENSMUST00000162072.8 |
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CDS GCA 72 bp | ACTGCGTCAAAGGAGCGGTCCATGGCAATGCACAGCTaGCGCATCTGGCCAGAGGGAAGGCGCCGCTTGAAC | + |
Preference number: 6 (lower is better) Translates to: TASKERSMAMHS*RIWPEGRRRLN Trigger: GTTCAAGCGGCGCCTTCCCTCTGGCCAGATGCGGCAGCTGTGCATTGCCATGGACCGCTCCTTTGACGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114573.9 ENSMUST00000161606.8 ENSMUST00000162072.8 |
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CDS GCA 72 bp | GGAGCTCATGGAGTCCAGTCGAGGCCGAGGACCCACTaGGTCAAAGGAGCGGTCCATGGCAATGCACAGCTG | + |
Preference number: 6 (lower is better) Translates to: GAHGVQSRPRTH*VKGAVHGNAQL Trigger: CAGCTGTGCATTGCCATGGACCGCTCCTTTGACGCAGTGGGTCCTCGGCCTCGACTGGACTCCATGAGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114573.9 ENSMUST00000161606.8 ENSMUST00000162072.8 |
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CDS CCA 72 bp | AGAAGTCGAGGAGGATGCAGTCGCGGTTGTGCTCCCTaGACTCTGCGGGGGTTTTCTGCCACGTGCTCAGTC | + |
Preference number: 6 (lower is better) Translates to: RSRGGCSRGCAP*TLRGFSATCSV Trigger: GACTGAGCACGTGGCAGAAAACCCCCGCAGAGTCCAGGGAGCACAACCGCGACTGCATCCTCCTCGACTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS CCA 72 bp | GTTGTGCTCCCTGGACTCTGCCACGTGCTCAGTCCCTaGAAGAAGAAGAAGAGCGCGAAGCCCCAGACCACG | + |
Preference number: 6 (lower is better) Translates to: VVLPGLCHVLSP*KKKKSAKPQTT Trigger: CGTGGTCTGGGGCTTCGCGCTCTTCTTCTTCTTCCAGGGACTGAGCACGTGGCAGAGTCCAGGGAGCACAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159033.2 |
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CDS TCA 72 bp | CTGGTCGTGCCCCTGGTAACTGTAGGAGAGGTCCCCTaGACCTGCGCTTTCAACCAACCCGTCAGTGGATCC | + |
Preference number: 6 (lower is better) Translates to: LVVPLVTVGEVP*TCAFNQPVSGS Trigger: GGATCCACTGACGGGTTGGTTGAAAGCGCAGGTTCAGGGGACCTCTCCTACAGTTACCAGGGGCACGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114573.9 ENSMUST00000161606.8 ENSMUST00000162072.8 |
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CDS GCA 72 bp | GCCAGATATCGTGGTCATCAAAGAAGTCGAGGAGGATaGAGTCGCGGTTGTGCTCCCTGGACTCTGCGGGGG | + |
Preference number: 6 (lower is better) Translates to: ARYRGHQRSRGG*SRGCAPWTLRG Trigger: CCCCCGCAGAGTCCAGGGAGCACAACCGCGACTGCATCCTCCTCGACTTCTTTGATGACCACGATATCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS CCA 72 bp | CCCGGGCGTGACCACTTTCTGGGCAGGCTCGGTCTATaGCCAACAGCAAGGTCTTCTTCCTTTGCCTCCAGT | + |
Preference number: 6 (lower is better) Translates to: PGRDHFLGRLGL*PTARSSSFASS Trigger: ACTGGAGGCAAAGGAAGAAGACCTTGCTGTTGGCCATAGACCGAGCCTGCCCAGAAAGTGGTCACGCCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000161042.2 |
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CDS CCA 72 bp | GCTGGGCCGCACTGCCTGAGACATAGGGCAGTTTCCTaGTGTCTATGGAGGGGTGAGCCAAGGCCACTTTCT | + |
Preference number: 6 (lower is better) Translates to: AGPHCLRHRAVS*CLWRGEPRPLS Trigger: AGAAAGTGGCCTTGGCTCACCCCTCCATAGACACCAGGAAACTGCCCTATGTCTCAGGCAGTGCGGCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160138.8 ENSMUST00000162072.8 |
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CDS CAA 90 bp | GCCTCCTTCTGGCGGACCACAAACAGCAAAGGCGCCCCTTTCTGCTaGTTCAGGACATTCACAGACACTCGCACACCCTCGGTCCGGTTG | + |
Preference number: 6 (lower is better) Translates to: ASFWRTTNSKGAPFC*FRTFTDTRTPSVRL Trigger: CAACCGGACCGAGGGTGTGCGAGTGTCTGTGAATGTCCTGAACAAGCAGAAAGGGGCGCCTTTGCTGTTTGTGGTCCGCCAGAAGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS GCA 72 bp | TCATCAAAGAAGTCGAGGAGGATGCAGTCGCGGTTGTaGTCCCTGGACTCTGCCACGTGCTCAGTCCCTGGA | + |
Preference number: 6 (lower is better) Translates to: SSKKSRRMQSRL*SLDSATCSVPG Trigger: TCCAGGGACTGAGCACGTGGCAGAGTCCAGGGAGCACAACCGCGACTGCATCCTCCTCGACTTCTTTGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159033.2 |
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CDS CCA 72 bp | ATTAGGGGCACCTGGAAGGACACAACAGCCTCCTTCTaGCGGACCACAAACAGCAAAGGCGCCCCTTTCTGC | + |
Preference number: 6 (lower is better) Translates to: IRGTWKDTTASF*RTTNSKGAPFC Trigger: GCAGAAAGGGGCGCCTTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGTTGTGTCCTTCCAGGTGCCCCTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS CCA 72 bp | TCAGTGTGTCGTAGTCATCCTCTTCCACGGAGCTCATaGAGTCCAGTCGAGGCCGAGGACCCACTGCGTCAA | + |
Preference number: 6 (lower is better) Translates to: SVCRSHPLPRSS*SPVEAEDPLRQ Trigger: TTGACGCAGTGGGTCCTCGGCCTCGACTGGACTCCATGAGCTCCGTGGAAGAGGATGACTACGACACACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000160138.8 ENSMUST00000160618.8 ENSMUST00000161606.8 ENSMUST00000162072.8 ENSMUST00000162529.8 |
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CDS CCA 72 bp | GTGAGCCAAGGCCACTTTCTGGGCAGGCTCGGTCTATaGCCAACAGCAAGGTCTTCTTCCTTTGCCTGCAGG | + |
Preference number: 6 (lower is better) Translates to: VSQGHFLGRLGL*PTARSSSFACR Trigger: CCTGCAGGCAAAGGAAGAAGACCTTGCTGTTGGCCATAGACCGAGCCTGCCCAGAAAGTGGCCTTGGCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160138.8 |
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CDS CCA 72 bp | CACTGCCTGAGACATAGGGCAGTTTCCTGGTGTCTATaGAGGGGTGAGCCAAGGCCACTTTCTGGGCAGGCT | + |
Preference number: 6 (lower is better) Translates to: HCLRHRAVSWCL*RGEPRPLSGQA Trigger: AGCCTGCCCAGAAAGTGGCCTTGGCTCACCCCTCCATAGACACCAGGAAACTGCCCTATGTCTCAGGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160138.8 ENSMUST00000162072.8 |
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CDS CCA 72 bp | CAAGACCCGGGCGTGACCAAGGAGAGAAGCACTTTCTaGGCAGGCTCGGTCTATGGCCAACAGCAAGGTCTT | + |
Preference number: 6 (lower is better) Translates to: QDPGVTKERSTF*AGSVYGQQQGL Trigger: AAGACCTTGCTGTTGGCCATAGACCGAGCCTGCCCAGAAAGTGCTTCTCTCCTTGGTCACGCCCGGGTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161606.8 ENSMUST00000162529.8 |
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CDS CAA 72 bp | ACGGAGGTGCAGACGATGCAGAGCAGAGGGATGAGCTaGATCCTCTCGCCGCTCCGGAGCTTCATGATGATG | + |
Preference number: 6 (lower is better) Translates to: TEVQTMQSRGMS*ILSPLRSFMMM Trigger: CATCATCATGAAGCTCCGGAGCGGCGAGAGGATCAAGCTCATCCCTCTGCTCTGCATCGTCTGCACCTCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS CAA 72 bp | TGGTCATCAAAGAAGTCGAGGAGGATGCAGTCGCGGTaGTGCTCCCTGGACTCTGCGGGGGTTTTCTGCCAC | + |
Preference number: 6 (lower is better) Translates to: WSSKKSRRMQSR*CSLDSAGVFCH Trigger: GTGGCAGAAAACCCCCGCAGAGTCCAGGGAGCACAACCGCGACTGCATCCTCCTCGACTTCTTTGATGACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS CAA 72 bp | TGGTCATCAAAGAAGTCGAGGAGGATGCAGTCGCGGTaGTGCTCCCTGGACTCTGCCACGTGCTCAGTCCCT | + |
Preference number: 6 (lower is better) Translates to: WSSKKSRRMQSR*CSLDSATCSVP Trigger: AGGGACTGAGCACGTGGCAGAGTCCAGGGAGCACAACCGCGACTGCATCCTCCTCGACTTCTTTGATGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159033.2 |
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CDS CAA 90 bp | CAGATATCGTGGTCATCAAAGAAGTCGAGGAGGATGCAGTCGCGGTaGTGCTCCCTGGACTCTGCGGGGGTTTTCTGCCACGTGCTCAGT | + |
Preference number: 6 (lower is better) Translates to: QISWSSKKSRRMQSR*CSLDSAGVFCHVLS Trigger: ACTGAGCACGTGGCAGAAAACCCCCGCAGAGTCCAGGGAGCACAACCGCGACTGCATCCTCCTCGACTTCTTTGATGACCACGATATCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS GCA 72 bp | GCCAGATATCGTGGTCATCAAAGAAGTCGAGGAGGATaGAGTCGCGGTTGTGCTCCCTGGACTCTGCCACGT | + |
Preference number: 6 (lower is better) Translates to: ARYRGHQRSRGG*SRGCAPWTLPR Trigger: ACGTGGCAGAGTCCAGGGAGCACAACCGCGACTGCATCCTCCTCGACTTCTTTGATGACCACGATATCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159033.2 |
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CDS CCA 72 bp | GTGAGCCAAGGCCACTTTCTGGGCAGGCTCGGTCTATaGCCAACAGCAAGGTCTTCTTCCTTTGCCTCCAGT | + |
Preference number: 6 (lower is better) Translates to: VSQGHFLGRLGL*PTARSSSFASS Trigger: ACTGGAGGCAAAGGAAGAAGACCTTGCTGTTGGCCATAGACCGAGCCTGCCCAGAAAGTGGCCTTGGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162072.8 |
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CDS CAA 72 bp | TGGCGGACCACAAACAGCAAAGGCGCCCCTTTCTGCTaGTTCAGGACATTCACAGACACTCGCACACCCTCG | + |
Preference number: 6 (lower is better) Translates to: WRTTNSKGAPFC*FRTFTDTRTPS Trigger: CGAGGGTGTGCGAGTGTCTGTGAATGTCCTGAACAAGCAGAAAGGGGCGCCTTTGCTGTTTGTGGTCCGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS CAA 72 bp | GGGCGCATGATGAGTCCGTATGCAGCCAGCGACCAGTaGATAATGTTGCCCATGACCAGAAGCACCATGCGG | + |
Preference number: 6 (lower is better) Translates to: GRMMSPYAASDQ*IMLPMTRSTMR Trigger: CCGCATGGTGCTTCTGGTCATGGGCAACATTATCAACTGGTCGCTGGCTGCATACGGACTCATCATGCGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS CAA 90 bp | TTCTGGGCAGGCTCGGTCTATGGCCAACAGCAAGGTCTTCTTCCTTaGCCTGCAGGAATTCAGGGGACAACTCCAGTTCTCCCAACAGGC | + |
Preference number: 6 (lower is better) Translates to: FWAGSVYGQQQGLLP*PAGIQGTTPVLPTG Trigger: GCCTGTTGGGAGAACTGGAGTTGTCCCCTGAATTCCTGCAGGCAAAGGAAGAAGACCTTGCTGTTGGCCATAGACCGAGCCTGCCCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160138.8 |
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CDS TCA 72 bp | ATAGACAGGGCACAGGACATCTTGGATGGAGATGACTaGGCAGGGGAAGGCCTTCTTGGAGGTCACCTTGAC | + |
Preference number: 6 (lower is better) Translates to: IDRAQDILDGDD*AGEGLLGGHLD Trigger: GTCAAGGTGACCTCCAAGAAGGCCTTCCCCTGCTCAGTCATCTCCATCCAAGATGTCCTGTGCCCTGTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS GCA 72 bp | CGTCTGGTAGGTGATCACCAGCTGCACCACAGGAAGTaGGTAGAAGACCGCAATGGTGGCTATGTTCCAGAA | + |
Preference number: 6 (lower is better) Translates to: RLVGDHQLHHRK*VEDRNGGYVPE Trigger: TTCTGGAACATAGCCACCATTGCGGTCTTCTACGCACTTCCTGTGGTGCAGCTGGTGATCACCTACCAGACG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS GCA 72 bp | AACGGAGAAGAAGATGACGATGGCCAAGCAGGCATATaGACTGTAGGCACTGGCGTTGATATCTGGGTGCCG | + |
Preference number: 6 (lower is better) Translates to: NGEEDDDGQAGI*TVGTGVDIWVP Trigger: CGGCACCCAGATATCAACGCCAGTGCCTACAGTGCATATGCCTGCTTGGCCATCGTCATCTTCTTCTCCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS GCA 72 bp | GCTCGGTCTATGGCCAACAGCAAGGTCTTCTTCCTTTaGCTGCAGGAATTCAGGGGACAACTCCAGTTCTCC | + |
Preference number: 6 (lower is better) Translates to: ARSMANSKVFFL*LQEFRGQLQFS Trigger: GGAGAACTGGAGTTGTCCCCTGAATTCCTGCAGGCAAAGGAAGAAGACCTTGCTGTTGGCCATAGACCGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160138.8 |
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CDS CCA 72 bp | CAAGGAGAGAAGCACTTTCTGGGCAGGCTCGGTCTATaGCCAACAGCAAGGTCTTCTTCCTTTGCCTCCAGT | + |
Preference number: 6 (lower is better) Translates to: QGEKHFLGRLGL*PTARSSSFASS Trigger: ACTGGAGGCAAAGGAAGAAGACCTTGCTGTTGGCCATAGACCGAGCCTGCCCAGAAAGTGCTTCTCTCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161606.8 ENSMUST00000162529.8 |
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CDS CAA 72 bp | GGCTCGGTCTATGGCCAACAGCAAGGTCTTCTTCCTTaGCCTGCAGGAATTCAGGGGACAACTCCAGTTCTC | + |
Preference number: 6 (lower is better) Translates to: GSVYGQQQGLLP*PAGIQGTTPVL Trigger: GAGAACTGGAGTTGTCCCCTGAATTCCTGCAGGCAAAGGAAGAAGACCTTGCTGTTGGCCATAGACCGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160138.8 |
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CDS GCA 72 bp | CCAGCAGCACAGTCAGCAGGTAGAAGGACAAGAATATaGCCAGGCAAAAGAGCATCCCACCAACATAGGCCT | + |
Preference number: 6 (lower is better) Translates to: PAAQSAGRRTRI*PGKRASHQHRP Trigger: AGGCCTATGTTGGTGGGATGCTCTTTTGCCTGGGCATATTCTTGTCCTTCTACCTGCTGACTGTGCTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000161042.2 ENSMUST00000161606.8 ENSMUST00000162072.8 ENSMUST00000162379.2 ENSMUST00000162529.8 |
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CDS GCA 72 bp | GGTCTATGGCCAACAGCAAGGTCTTCTTCCTTTGCCTaGAGGAATTCAGGGGACAACTCCAGTTCTCCCAAC | + |
Preference number: 6 (lower is better) Translates to: GLWPTARSSSFA*RNSGDNSSSPN Trigger: GTTGGGAGAACTGGAGTTGTCCCCTGAATTCCTGCAGGCAAAGGAAGAAGACCTTGCTGTTGGCCATAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160138.8 |
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CDS CAA 90 bp | CACAGGACATCTTGGATGGAGATGACTGAGCAGGGGAAGGCCTTCTaGGAGGTCACCTTGACAATTACCGAGTCCACACCATCAGGAAAC | + |
Preference number: 6 (lower is better) Translates to: HRTSWMEMTEQGKAF*EVTLTITESTPSGN Trigger: GTTTCCTGATGGTGTGGACTCGGTAATTGTCAAGGTGACCTCCAAGAAGGCCTTCCCCTGCTCAGTCATCTCCATCCAAGATGTCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS GCA 72 bp | AGGAAGGACCCAAACATGGCAATGGAGGACAGGAAGTaGCAGATATCGTGGTCATCAAAGAAGTCGAGGAGG | + |
Preference number: 6 (lower is better) Translates to: RKDPNMAMEDRK*QISWSSKKSRR Trigger: CCTCCTCGACTTCTTTGATGACCACGATATCTGGCACTTCCTGTCCTCCATTGCCATGTTTGGGTCCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000159033.2 |
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CDS CAA 90 bp | TGGATGGAGATGACTGAGCAGGGGAAGGCCTTCTTGGAGGTCACCTaGACAATTACCGAGTCCACACCATCAGGAAACTCGTATTTGAAG | + |
Preference number: 6 (lower is better) Translates to: WMEMTEQGKAFLEVT*TITESTPSGNSYLK Trigger: CTTCAAATACGAGTTTCCTGATGGTGTGGACTCGGTAATTGTCAAGGTGACCTCCAAGAAGGCCTTCCCCTGCTCAGTCATCTCCATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS TCA 72 bp | ACGGTTGACTCGGAGCTGGTAAGTGGTATTGACGGGTaGCAGGGTAGACACGTCCACATAGAAAAACTGGAT | + |
Preference number: 6 (lower is better) Translates to: TVDSELVSGIDG*QGRHVHIEKLD Trigger: ATCCAGTTTTTCTATGTGGACGTGTCTACCCTGTCACCCGTCAATACCACTTACCAGCTCCGAGTCAACCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS CCA 72 bp | CCAGCTGCACCACAGGAAGTGCGTAGAAGACCGCAATaGTGGCTATGTTCCAGAAGTAAATCTGGTACTTTT | + |
Preference number: 6 (lower is better) Translates to: PAAPQEVRRRPQ*WLCSRSKSGTF Trigger: AAAAGTACCAGATTTACTTCTGGAACATAGCCACCATTGCGGTCTTCTACGCACTTCCTGTGGTGCAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 |
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CDS CAA 90 bp | ACACGTTTGTCCTTTCGTGCCAGATCAGCCACACAGAGGTATTGCTaGGTTCGAATGACGTTTTTGTCTGAGTCGATGTCAGTCAGTGTG | + |
Preference number: 6 (lower is better) Translates to: TRLSFRARSATQRYC*VRMTFLSESMSVSV Trigger: CACACTGACTGACATCGACTCAGACAAAAACGTCATTCGAACCAAGCAATACCTCTGTGTGGCTGATCTGGCACGAAAGGACAAACGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000160138.8 ENSMUST00000160618.8 ENSMUST00000162072.8 |
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CDS CAA 90 bp | GTCACCTTGACAATTACCGAGTCCACACCATCAGGAAACTCGTATTaGAAGTACTGGGGCTGGGCTGCAGTGGTATTAAAAGTAAACAGC | + |
Preference number: 6 (lower is better) Translates to: VTLTITESTPSGNSY*KYWGWAAVVLKVNS Trigger: GCTGTTTACTTTTAATACCACTGCAGCCCAGCCCCAGTACTTCAAATACGAGTTTCCTGATGGTGTGGACTCGGTAATTGTCAAGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS TCA 72 bp | CCAGATCAGCCACACAGAGGTATTGCTTGGTTCGAATaGCGTTTTTGTCTGAGTCGATGTCAGTCAGTGTGT | + |
Preference number: 6 (lower is better) Translates to: PDQPHRGIAWFE*RFCLSRCQSVC Trigger: ACACACTGACTGACATCGACTCAGACAAAAACGTCATTCGAACCAAGCAATACCTCTGTGTGGCTGATCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000160138.8 ENSMUST00000160618.8 ENSMUST00000162072.8 |
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CDS CAA 72 bp | TCCTTTCGTGCCAGATCAGCCACACAGAGGTATTGCTaGGTTCGAATGACGTTTTTGTCTGAGTCGATGTCA | + |
Preference number: 6 (lower is better) Translates to: SFRARSATQRYC*VRMTFLSESMS Trigger: TGACATCGACTCAGACAAAAACGTCATTCGAACCAAGCAATACCTCTGTGTGGCTGATCTGGCACGAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000160138.8 ENSMUST00000160618.8 ENSMUST00000162072.8 |
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CDS TCA 72 bp | ACAGAGGTATTGCTTGGTTCGAATGACGTTTTTGTCTaGGTCGATGTCAGTCAGTGTGTCGTAGTCATCCTC | + |
Preference number: 6 (lower is better) Translates to: TEVLLGSNDVFV*VDVSQCVVVIL Trigger: GAGGATGACTACGACACACTGACTGACATCGACTCAGACAAAAACGTCATTCGAACCAAGCAATACCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000160138.8 ENSMUST00000160618.8 ENSMUST00000162072.8 |
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CDS GCA 72 bp | ATCAGGAAACTCGTATTTGAAGTACTGGGGCTGGGCTaGAGTGGTATTAAAAGTAAACAGCTCTCCAGTCCT | + |
Preference number: 6 (lower is better) Translates to: IRKLVFEVLGLG*SGIKSKQLSSP Trigger: AGGACTGGAGAGCTGTTTACTTTTAATACCACTGCAGCCCAGCCCCAGTACTTCAAATACGAGTTTCCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS CCA 72 bp | ACACCATCAGGAAACTCGTATTTGAAGTACTGGGGCTaGGCTGCAGTGGTATTAAAAGTAAACAGCTCTCCA | + |
Preference number: 6 (lower is better) Translates to: TPSGNSYLKYWG*AAVVLKVNSSP Trigger: TGGAGAGCTGTTTACTTTTAATACCACTGCAGCCCAGCCCCAGTACTTCAAATACGAGTTTCCTGATGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |
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CDS CAA 72 bp | ACAATTACCGAGTCCACACCATCAGGAAACTCGTATTaGAAGTACTGGGGCTGGGCTGCAGTGGTATTAAAA | + |
Preference number: 6 (lower is better) Translates to: TITESTPSGNSY*KYWGWAAVVLK Trigger: TTTTAATACCACTGCAGCCCAGCCCCAGTACTTCAAATACGAGTTTCCTGATGGTGTGGACTCGGTAATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038488.17 ENSMUST00000114573.9 ENSMUST00000162072.8 |