Pregenerated sensors for SIDT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022696Ensembl transcript IDs: ENSMUST00000047446.13, ENSMUST00000136381.8, ENSMUST00000147032.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGTTCGGTCCCCTAAGAGGCCGGGGAAGAATTCGATGGTGCTTTaGCCTTCTATAGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: GVRSPKRPGKNSMVL*PSIAAGVSEVWKWP Trigger: TGGCCACTTCCACACCTCTGAGACACCTGCTGCTATAGAAGGCCAAAGCACCATCGAATTCTTCCCCGGCCTCTTAGGGGACCGAACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR TCA 90 bp | GCCTGCCCCATCCACTTCCTTACTAAATGCTCAAGAGAGCACAGGTaGGGAGTAACTTCGATTTCACAAGCAAGTAGGCATGTGTGCACA | + |
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Preference number: 1 (lower is better) Translates to: ACPIHFLTKCSREHR*GVTSISQASRHVCT Trigger: TGTGCACACATGCCTACTTGCTTGTGAAATCGAAGTTACTCCTCACCTGTGCTCTCTTGAGCATTTAGTAAGGAAGTGGATGGGGCAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
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| 3UTR CCA 90 bp | TTAACTTTTCGACAGAATGCTTCAGTTTGTTTTCAGACTCCGTGCTaGAAAGAGCTGGCGGTTCCCTTCAGTCTGTGGGATCTACAGAGA | + |
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Preference number: 1 (lower is better) Translates to: LTFRQNASVCFQTPC*KELAVPFSLWDLQR Trigger: TCTCTGTAGATCCCACAGACTGAAGGGAACCGCCAGCTCTTTCCAGCACGGAGTCTGAAAACAAACTGAAGCATTCTGTCGAAAAGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147032.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGCAGACTATGTCTCTGTaGGCAACAGGGCATCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SSRCLRGVEVATLKVLGGQTMSL*ATGHPF Trigger: GAAGGGATGCCCTGTTGCGCACAGAGACATAGTCTG...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAGCTGGTTTCTCTGGTCAATATCTATGAGGATGGGAGGGGCCAGGTGGAGATGGAGCGTCTGGCAGTaGGCAAGCTGCTACACTCAC | + |
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Preference number: 2 (lower is better) Translates to: SSWFLWSISMRMGGARWRWSVWQ*ASCYTH Trigger: GTGAGTGTAGCAGCTTGCCCACTGCCAGACGCTCCA...TCTCCACCTGGCCCCTCCCATCCTCATAGATATTGACCAGAGAAACCAGCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACGTGGAGAAGCTGGCCTaGTGCAGCTTGTGTCTAGAC | + |
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Preference number: 2 (lower is better) Translates to: FSICVHLGAVRSLGRKRDVEKLA*CSLCLD Trigger: GTCTAGACACAAGCTGCATCAGGCCAGCTTCTCCAC...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTATAGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTATCTGGTCAATATCTATaGGGATGGGAGGGGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: FYSSRCLRGVEVATLKVLSGQYL*GWEGPG Trigger: ACCTGGCCCCTCCCATCCTCATAGATATTGACCAGA...TAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCTATAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCTCGAGTTTGCCAGGTGGCATGAGAGAAGAAAGCTCGAACATTGCGCTTAGGATCCAGAGTCACTaGGGTGAATGCTGCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: FSSSLPGGMREESSNIALRIQSH*GECCLS Trigger: AGACAGGCAGCATTCACCTCAGTGACTCTGGATCCT...AAGCGCAATGTTCGAGCTTTCTTCTCTCATGCCACCTGGCAAACTCGAGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACTCTGGTCAATATCTATaGGGATGGGAGGGGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: FSICVHLGAVRSLGRKRDSGQYL*GWEGPG Trigger: ACCTGGCCCCTCCCATCCTCATAGATATTGACCAGA...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACGCAAACAGAGGTTCTTaGGCCTCCAGACTATGTCTC | + |
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Preference number: 2 (lower is better) Translates to: FSICVHLGAVRSLGRKRDANRGS*ASRLCL Trigger: GAGACATAGTCTGGAGGCTCAAGAACCTCTGTTTGC...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCTCGAGTTTGCCAGGTGGCATGAGAGAAGAAAGCTCGAACATTGCGCTTGTCAGCATCCAACAGTaGGATGAAGACCTGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: FSSSLPGGMREESSNIALVSIQQ*DEDLKK Trigger: CTTCTTCAGGTCTTCATCTCACTGTTGGATGCTGAC...AAGCGCAATGTTCGAGCTTTCTTCTCTCATGCCACCTGGCAAACTCGAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
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| 3UTR-3UTR TCA 90 bp | GACCTGAAGAAGCAGGTAATCACCCAGGCCTTGGATCCACAAACGTTCAGAAGTCCCTTCTACCATTCTTaGGGTTTAGTTCAGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: DLKKQVITQALDPQTFRSPFYHS*GLVQSQ Trigger: TTGGGACTGAACTAAACCTCAAGAATGGTAGAAGGG...ACTTCTGAACGTTTGTGGATCCAAGGCCTGGGTGATTACCTGCTTCTTCAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGATGACATCATACTCCACACAACCAGGAAGCCTGATCAAAATGGGGCTTCTGTTTGCCAGGTGGCATaGGAGAAGAAAGCTCGAACA | + |
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Preference number: 2 (lower is better) Translates to: SDDIILHTTRKPDQNGASVCQVA*EKKART Trigger: TGTTCGAGCTTTCTTCTCTCATGCCACCTGGCAAAC...AGAAGCCCCATTTTGATCAGGCTTCCTGGTTGTGTGGAGTATGATGTCATCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCTCGAGTTTGCCAGGTGGCATGAGAGAAGAAAGCTCGAACATTGCGCTTAATTCGATGGTGCTTTaGCCTTCTATAGCAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: FSSSLPGGMREESSNIALNSMVL*PSIAAG Trigger: ACCTGCTGCTATAGAAGGCCAAAGCACCATCGAATT...AAGCGCAATGTTCGAGCTTTCTTCTCTCATGCCACCTGGCAAACTCGAGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACCCCTTCTACCATTCTTaGGGTTTAGTTCAGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: FSICVHLGAVRSLGRKRDPFYHS*GLVQSQ Trigger: TTGGGACTGAACTAAACCTCAAGAATGGTAGAAGGG...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR TCA 90 bp | GACCTGAAGAAGCAGGTAATCACCCAGGCCTTGGATCCACAAACGTTCAGAAGTAGAGGTGACTTAGCTTaGCTTACTAGAATGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: DLKKQVITQALDPQTFRSRGDLA*LTRMSV Trigger: GACAGACATTCTAGTAAGTCAAGCTAAGTCACCTCT...ACTTCTGAACGTTTGTGGATCCAAGGCCTGGGTGATTACCTGCTTCTTCAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGCAAGCTCTTCCTGTGTaGATTCAGACACCCTTGACT | + |
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Preference number: 2 (lower is better) Translates to: IFSICVHLGAVRSLGRKRQALPV*IQTPLT Trigger: AGTCAAGGGTGTCTGAATTCACACAGGAAGAGCTTG...CCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR CCA 90 bp | GACCTGAAGAAGCAGGTAATCACCCAGGCCTTGGATCCACAAACGTTCAGAAGTAGTAGCTGGTTTCTCTaGTCAATATCTATGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: DLKKQVITQALDPQTFRSSSWFL*SISMRM Trigger: CATCCTCATAGATATTGACCAGAGAAACCAGCTACT...ACTTCTGAACGTTTGTGGATCCAAGGCCTGGGTGATTACCTGCTTCTTCAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR TCA 72 bp | AGTCCCAAGCTCTTCCTGTGTGAATTCAGACACCCTTaGCTCCCTCCAGGCAGGTGGAGCGTCTGGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: SPKLFLCEFRHP*LPPGRWSVWQW Trigger: CCACTGCCAGACGCTCCACCTGCCTGGAGGGAGTCAAGGGTGTCTGAATTCACACAGGAAGAGCTTGGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR GCA 72 bp | GCATGTCTACATCCCATCCCAGAGCATTCCCAGCCCTaGCAGGAATTCCGCATTCCTTCTGAAGAGGTGACT | + |
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Preference number: 3 (lower is better) Translates to: ACLHPIPEHSQP*QEFRIPSEEVT Trigger: AGTCACCTCTTCAGAAGGAATGCGGAATTCCTGGCAGGGCTGGGAATGCTCTGGGATGGGATGTAGACATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR GCA 72 bp | TCACCCAGGCCTTGGATCCACAAACGTTCAGAAGTGTaGATGTCTACATCCCATCCCAGAGCATTCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SPRPWIHKRSEV*MSTSHPRAFPA Trigger: GGCTGGGAATGCTCTGGGATGGGATGTAGACATGCACACTTCTGAACGTTTGTGGATCCAAGGCCTGGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACCAGTTGGGTGGGGACTaGGTCCCACTTCTGCACCGT | + |
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Preference number: 3 (lower is better) Translates to: FSICVHLGAVRSLGRKRDQLGGD*VPLLHR Trigger: ACGGTGCAGAAGTGGGACCAAGTCCCCACCCAACTG...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGTCCCTTCTACCATTCTaGAGGTTTAGTTCAGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SSRCLRGVEVATLKVLGGSLLPF*RFSSVP Trigger: TGGGACTGAACTAAACCTCAAGAATGGTAGAAGGGA...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACAATGTCTGTCTCCAGTaGGGTGGGGACTTGGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: FSICVHLGAVRSLGRKRDNVCLQ*GGDLVP Trigger: TGGGACCAAGTCCCCACCCAACTGGAGACAGACATT...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR TCA 72 bp | CGCATCAGAGTGCAGAGTCAGCATCCAACAGTGAGATaGAGACCTGAAGAAGCAGGTAATCACCCAGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: RIRVQSQHPTVR*RPEEAGNHPGL Trigger: AAGGCCTGGGTGATTACCTGCTTCTTCAGGTCTTCATCTCACTGTTGGATGCTGACTCTGCACTCTGATGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR CCA 72 bp | CTTCAGTTTGTTTTCAGACTCCGTGCTGGAAAGAGCTaGCGGTTCCCTTCAGTCTGTGGGATCTACAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: LQFVFRLRAGKS*RFPSVCGIYRE Trigger: CTCTCTGTAGATCCCACAGACTGAAGGGAACCGCCAGCTCTTTCCAGCACGGAGTCTGAAAACAAACTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147032.2 |
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| 3UTR CCA 72 bp | TCAGCCACTAAGCGCTGTCCATCACTTCCACTGCTGTaGAAAGCATTTTCTCCATCTGTGTCCATCTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: SATKRCPSLPLL*KAFSPSVSILE Trigger: CTCCAAGATGGACACAGATGGAGAAAATGCTTTCCACAGCAGTGGAAGTGATGGACAGCGCTTAGTGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR TCA 72 bp | TCCTCCTGGGAACAGAGAATGGGATCCTGTAAGAGGTaGTTAGTCATGACCTCTGTGACTCATCCAGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: SSWEQRMGSCKR*LVMTSVTHPVV Trigger: CACAACTGGATGAGTCACAGAGGTCATGACTAATCACCTCTTACAGGATCCCATTCTCTGTTCCCAGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| 3UTR TCA 72 bp | ACTCAGACAAGTCACCTCACTGTTGTGTTTTCACAGTaGAAACTCTACCAGCATGCTATGTGGGACATTGAC | + |
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Preference number: 3 (lower is better) Translates to: TQTSHLTVVFSQ*KLYQHAMWDID Trigger: GTCAATGTCCCACATAGCATGCTGGTAGAGTTTTCACTGTGAAAACACAACAGTGAGGTGACTTGTCTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147032.2 |
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| 3UTR GCA 72 bp | GGAGTAACTTCGATTTCACAAGCAAGTAGGCATGTGTaGACACACTTATATGTCTATTTTCTGATGACATCA | + |
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Preference number: 3 (lower is better) Translates to: GVTSISQASRHV*THLYVYFLMTS Trigger: TGATGTCATCAGAAAATAGACATATAAGTGTGTGCACACATGCCTACTTGCTTGTGAAATCGAAGTTACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGGCGAGGGGCTCTTCCTaGTGGCCAGGGACCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SSRCLRGVEVATLKVLGGARGSS*WPGTAA Trigger: GGCGGCGGTCCCTGGCCACCAGGAAGAGCCCCTCGC...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR CCA 90 bp | AGTAGCTGGTTTCTCTGGTCAATATCTATGAGGATGGGAGGGGCCAGGTGGAGAGCGAGGGGCTCTTCCTaGTGGCCAGGGACCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SSWFLWSISMRMGGARWRARGSS*WPGTAA Trigger: GGCGGCGGTCCCTGGCCACCAGGAAGAGCCCCTCGC...TCTCCACCTGGCCCCTCCCATCCTCATAGATATTGACCAGAGAAACCAGCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR GCA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGCTTCTCCCGGGATTCTaGAGGGGTCCCCTCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SSRCLRGVEVATLKVLGGLLPGF*RGPLPA Trigger: AGCTGGGAGGGGACCCCTGCAGAATCCCGGGAGAAG...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGCCCACACCACGGCAGTaGCCGCGATGCAGAAGACTG | + |
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Preference number: 4 (lower is better) Translates to: SSRCLRGVEVATLKVLGGPTPRQ*PRCRRL Trigger: CAGTCTTCTGCATCGCGGCCACTGCCGTGGTGTGGG...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR CCA 90 bp | GCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTTCGAAATCCGCTCCCCTaGCGGGGTCTCGCGGATCGC | + |
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Preference number: 4 (lower is better) Translates to: ATLTVFSTKQHQGGLLRLRNPLP*RGLADR Trigger: GCGATCCGCGAGACCCCGCCAGGGGAGCGGATTTCG...AAGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR TCA 90 bp | CGTCTGGCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCAGATGTTCTCGGTGCTaGGGCTCACCACCCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RLAVGKLLHSPCFPQNSTRCSRC*GSPPRC Trigger: ACAGCGGGGTGGTGAGCCTCAGCACCGAGAACATCT...GGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGCCAGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR TCA 90 bp | GCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGCGGGCGTGCTGGCAGTaGTGGGATGTGAGACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: AVGKLLHSPCFPQNSTKVRACWQ*WDVRQP Trigger: TGGCTGTCTCACATCCCATCACTGCCAGCACGCCCG...CACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR GCA 90 bp | GCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGCTTCTCCCGGGATTCTaGAGGGGTCCCCTCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: AVGKLLHSPCFPQNSTKVLLPGF*RGPLPA Trigger: AGCTGGGAGGGGACCCCTGCAGAATCCCGGGAGAAG...CACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR TCA 90 bp | TTGACTCCCTCCAGGCAGGTGGAGCGTCTGGCAGTGGGCAAGCTGCTACACTCAGGCAGTGATGGGATGTaGGACAGCCATATTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LTPSRQVERLAVGKLLHSGSDGM*DSHISR Trigger: TCTGGAAATATGGCTGTCTCACATCCCATCACTGCC...TGAGTGTAGCAGCTTGCCCACTGCCAGACGCTCCACCTGCCTGGAGGGAGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR TCA 90 bp | TGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTCGGGCGTGCTGGCAGTaGTGGGATGTGAGACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: CYTHRVFHKTAPRWVAPSRACWQ*WDVRQP Trigger: TGGCTGTCTCACATCCCATCACTGCCAGCACGCCCG...AGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR TCA 90 bp | TTGACTCCCTCCAGGCAGGTGGAGCGTCTGGCAGTGGGCAAGCTGCTACACTCACCAGATTTCCCACAATaGGCAACACCATCCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LTPSRQVERLAVGKLLHSPDFPQ*ATPSCP Trigger: TGGACAGGATGGTGTTGCTCATTGTGGGAAATCTGG...TGAGTGTAGCAGCTTGCCCACTGCCAGACGCTCCACCTGCCTGGAGGGAGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR CCA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACCGAAATCCGCTCCCCTaGCGGGGTCTCGCGGATCGC | + |
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Preference number: 4 (lower is better) Translates to: FSICVHLGAVRSLGRKRDRNPLP*RGLADR Trigger: GCGATCCGCGAGACCCCGCCAGGGGAGCGGATTTCG...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR CCA 90 bp | TTGACTCCCTCCAGGCAGGTGGAGCGTCTGGCAGTGGGCAAGCTGCTACACTCAAAGCCCAGGAGTACGTaGCCCAGGTTACTGAGAATA | + |
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Preference number: 4 (lower is better) Translates to: LTPSRQVERLAVGKLLHSKPRST*PRLLRI Trigger: TATTCTCAGTAACCTGGGCCACGTACTCCTGGGCTT...TGAGTGTAGCAGCTTGCCCACTGCCAGACGCTCCACCTGCCTGGAGGGAGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR CCA 90 bp | CGTCTGGCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCTCCAGGGCTCTTCGGTaGAGAAGGTCTCTGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RLAVGKLLHSPCFPQNSTSRALR*RRSLRR Trigger: TCTGCGCAGAGACCTTCTCCACCGAAGAGCCCTGGA...GGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGCCAGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS-3UTR TCA 90 bp | AGTAGCTGGTTTCTCTGGTCAATATCTATGAGGATGGGAGGGGCCAGGTGGAGAAGATGTTCTCGGTGCTaGGGCTCACCACCCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSWFLWSISMRMGGARWRRCSRC*GSPPRC Trigger: ACAGCGGGGTGGTGAGCCTCAGCACCGAGAACATCT...TCTCCACCTGGCCCCTCCCATCCTCATAGATATTGACCAGAGAAACCAGCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TTGACTCCCTCCAGGCAGGTGGAGCGTCTGGCAGTGGGCAAGCTGCTACACTCACAGCGATCATGTACATaGAGGAAGTGTCGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTPSRQVERLAVGKLLHSQRSCT*RKCRTG Trigger: TCCAGTTCGACACTTCCTTCATGTACATGATCGCTG...TGAGTGTAGCAGCTTGCCCACTGCCAGACGCTCCACCTGCCTGGAGGGAGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTGGCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCGCAGCAGGTTGCAGATaGAGATGCCCAGCATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLAVGKLLHSPCFPQNSTAAGCR*RCPACR Trigger: CCTACATGCTGGGCATCTTCATCTGCAACCTGCTGC...GGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGCCAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | GACCTGAAGAAGCAGGTAATCACCCAGGCCTTGGATCCACAAACGTTCAGAAGTCCCACACCACGGCAGTaGCCGCGATGCAGAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: DLKKQVITQALDPQTFRSPTPRQ*PRCRRL Trigger: CAGTCTTCTGCATCGCGGCCACTGCCGTGGTGTGGG...ACTTCTGAACGTTTGTGGATCCAAGGCCTGGGTGATTACCTGCTTCTTCAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | TGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTGAGGAACTGTTGACATaGACCCGCACGGCTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: CYTHRVFHKTAPRWVAPSEELLT*TRTAVT Trigger: GGTGACAGCCGTGCGGGTGCATGTCAACAGTTCCTC...AGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGCTGGTTTCTCTGGTCAATATCTATGAGGATGGGAGGGGCCAGGTGGAGAGAGGAACTGTTGACATaGACCCGCACGGCTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SSWFLWSISMRMGGARWREELLT*TRTAVT Trigger: GGTGACAGCCGTGCGGGTGCATGTCAACAGTTCCTC...TCTCCACCTGGCCCCTCCCATCCTCATAGATATTGACCAGAGAAACCAGCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TTGACTCCCTCCAGGCAGGTGGAGCGTCTGGCAGTGGGCAAGCTGCTACACTCAACTGATAGACACCATTaGATTCCACATTGTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTPSRQVERLAVGKLLHSTDRHH*IPHCGP Trigger: TGGACCACAATGTGGAATTCAATGGTGTCTATCAGT...TGAGTGTAGCAGCTTGCCCACTGCCAGACGCTCCACCTGCCTGGAGGGAGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTGGCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCTTCCTGGATGGAGAATaGTCCGCCACAGGCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: RLAVGKLLHSPCFPQNSTFLDGE*SATGII Trigger: GATTATGCCTGTGGCGGATCATTCTCCATCCAGGAA...GGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGCCAGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTGGCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCGGATGGCAGAGAAGATaGTCCAGAACCACACATCGT | + |
|
Preference number: 4 (lower is better) Translates to: RLAVGKLLHSPCFPQNSTGWQRR*SRTTHR Trigger: ACGATGTGTGGTTCTGGATCATCTTCTCTGCCATCC...GGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGCCAGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTTCCCCTCCCAGCTGCTaGGGTTCTGGAAGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CYTHRVFHKTAPRWVAPSSPPSC*GSGRRS Trigger: ACTTCTTCTTCCAGAACCTCAGCAGCTGGGAGGGGA...AGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | TTGACTCCCTCCAGGCAGGTGGAGCGTCTGGCAGTGGGCAAGCTGCTACACTCAAACACCACGAAGAACTaGTCATCTGGAAAATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTPSRQVERLAVGKLLHSNTTKN*SSGKSF Trigger: GAAGGATTTTCCAGATGAGCAGTTCTTCGTGGTGTT...TGAGTGTAGCAGCTTGCCCACTGCCAGACGCTCCACCTGCCTGGAGGGAGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGCTGCATCACAGGCAGTaGATAAAACACAGCGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRCLRGVEVATLKVLGGLHHRQ*IKHSDG Trigger: ACCATCGCTGTGTTTTATGCACTGCCTGTGATGCAG...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGTATACAGAGGTCTGCTaGATTGCTGGATACAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSRCLRGVEVATLKVLGGYTEVC*IAGYSP Trigger: CGGACTGTATCCAGCAATGCAGCAGACCTCTGTATA...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGTCCTCCGGTCCTTCCTaGACAGATCTGACAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: AVGKLLHSPCFPQNSTKVSSGPS*TDLTGT Trigger: TGTACCTGTCAGATCTGTCCAGGAAGGACCGGAGGA...CACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| 3UTR CAA 72 bp | AGGGTAATCCCGGGAAAAGGCTATAATGGGCATAGATaGAGCTGTGTGTCTGGGGACCACCAAGCACGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVIPGKGYNGHR*SCVSGDHQARL Trigger: CAACCGTGCTTGGTGGTCCCCAGACACACAGCTCAATCTATGCCCATTATAGCCTTTTCCCGGGATTACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCCTCGAGTTTGCCAGGTGGCATGAGAGAAGAAAGCTCGAACATTGCGCTTCCTTCTTCTGCAGCGTaGTGGCGGCTTTCTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSSSLPGGMREESSNIALPSSAA*WRLSWS Trigger: TGACCAAGAAAGCCGCCATCACGCTGCAGAAGAAGG...AAGCGCAATGTTCGAGCTTTCTTCTCTCATGCCACCTGGCAAACTCGAGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | AGTAGCTGGTTTCTCTGGTCAATATCTATGAGGATGGGAGGGGCCAGGTGGAGACATGGTAACAAGCACTaGGCACGCCCTCCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSWFLWSISMRMGGARWRHGNKH*ARPPSS Trigger: TGATGATGGAGGGCGTGCTCAGTGCTTGTTACCATG...TCTCCACCTGGCCCCTCCCATCCTCATAGATATTGACCAGAGAAACCAGCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGCCAGATTTCCCACAATaGGCAACACCATCCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVGKLLHSPCFPQNSTKVPDFPQ*ATPSCP Trigger: TGGACAGGATGGTGTTGCTCATTGTGGGAAATCTGG...CACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | GACCTGAAGAAGCAGGTAATCACCCAGGCCTTGGATCCACAAACGTTCAGAAGTGCAGCAGGTTGCAGATaGAGATGCCCAGCATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLKKQVITQALDPQTFRSAAGCR*RCPACR Trigger: CCTACATGCTGGGCATCTTCATCTGCAACCTGCTGC...ACTTCTGAACGTTTGTGGATCCAAGGCCTGGGTGATTACCTGCTTCTTCAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | AGTAGCTGGTTTCTCTGGTCAATATCTATGAGGATGGGAGGGGCCAGGTGGAGACAACAGCACCAGGAATaGGAAAAACAGGGCAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSWFLWSISMRMGGARWRQQHQE*EKQGSR Trigger: GCGACTGCCCTGTTTTTCTCATTCCTGGTGCTGTTG...TCTCCACCTGGCCCCTCCCATCCTCATAGATATTGACCAGAGAAACCAGCTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGACAACACTTCTTTCTaGTGGCGAACCACAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVGKLLHSPCFPQNSTKVDNTSF*WRTTTR Trigger: CCTGGTTGTGGTTCGCCAGCAGAAAGAAGTGTTGTC...CACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTGGCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGGCCCGTCTCATTaGTTGCTTTTGAAGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: RLAVGKLLHSPCFPQNSTKGPSH*LLLKGI Trigger: TATGCCCTTCAAAAGCAACCAATGAGACGGGCCCTT...GGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGCCAGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | GCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTTCACCATGGGGCGCCATaGACGCTACATCTACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATLTVFSTKQHQGGLLRLHHGAP*TLHLQR Trigger: TCTTTGTAGATGTAGCGTCCATGGCGCCCCATGGTG...AAGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGTTTCATTTTCCTGGATaGAGAATGATCCGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRCLRGVEVATLKVLGGFHFPG*RMIRHR Trigger: CCTGTGGCGGATCATTCTCCATCCAGGAAAATGAAA...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | TTGACTCCCTCCAGGCAGGTGGAGCGTCTGGCAGTGGGCAAGCTGCTACACTCAAGATTCTTTGATGGATaGGACAATGGTCACTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTPSRQVERLAVGKLLHSRFFDG*DNGHFQ Trigger: CTGAAAGTGACCATTGTCCCATCCATCAAAGAATCT...TGAGTGTAGCAGCTTGCCCACTGCCAGACGCTCCACCTGCCTGGAGGGAGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGTCTGCCTCCCAGGACTaGAACTGGACTCATCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: AVGKLLHSPCFPQNSTKVSASQD*NWTHLL Trigger: CAATAGATGAGTCCAGTTCCAGTCCTGGGAGGCAGA...CACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACTCCAGGGCTCTTCGGTaGAGAAGGTCTCTGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSICVHLGAVRSLGRKRDSRALR*RRSLRR Trigger: TCTGCGCAGAGACCTTCTCCACCGAAGAGCCCTGGA...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | GACCTGAAGAAGCAGGTAATCACCCAGGCCTTGGATCCACAAACGTTCAGAAGTGATGGCTGGTGTGGTTaGAGGAGTAGATGTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DLKKQVITQALDPQTFRSDGWCG*RSRCSR Trigger: CCGAGAACATCTACTCCTTCAACCACACCAGCCATC...ACTTCTGAACGTTTGTGGATCCAAGGCCTGGGTGATTACCTGCTTCTTCAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTTTCCTGGATGGAGAATaGTCCGCCACAGGCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: CYTHRVFHKTAPRWVAPSFLDGE*SATGII Trigger: GATTATGCCTGTGGCGGATCATTCTCCATCCAGGAA...AGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCCTCGAGTTTGCCAGGTGGCATGAGAGAAGAAAGCTCGAACATTGCGCTTCATGGTAACAAGCACTaGGCACGCCCTCCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FSSSLPGGMREESSNIALHGNKH*ARPPSS Trigger: TGATGATGGAGGGCGTGCTCAGTGCTTGTTACCATG...AAGCGCAATGTTCGAGCTTTCTTCTCTCATGCCACCTGGCAAACTCGAGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACTCCCCTCCCAGCTGCTaGGGTTCTGGAAGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSICVHLGAVRSLGRKRDSPPSC*GSGRRS Trigger: ACTTCTTCTTCCAGAACCTCAGCAGCTGGGAGGGGA...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | GCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTTGACAACACTTCTTTCTaGTGGCGAACCACAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATLTVFSTKQHQGGLLRLDNTSF*WRTTTR Trigger: CCTGGTTGTGGTTCGCCAGCAGAAAGAAGTGTTGTC...AAGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGAACACTTCTTTCTGCTaGCGAACCACAACCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AVGKLLHSPCFPQNSTKVNTSFC*RTTTRT Trigger: AGTCCTGGTTGTGGTTCGCCAGCAGAAAGAAGTGTT...CACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGGTCCAGATCATACACTaGACACATGATGTTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRCLRGVEVATLKVLGGVQIIH*THDVLN Trigger: GTTCAGAACATCATGTGTCCAGTGTATGATCTGGAC...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | GCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTTTTCCAGAGCCATCGCTaGAACCAAAGCTTCCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ATLTVFSTKQHQGGLLRLFQSHR*NQSFRQ Trigger: TTGACGGAAGCTTTGGTTCCAGCGATGGCTCTGGAA...AAGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | GCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTTTCCCAGGACTGGAACTaGACTCATCTATTGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ATLTVFSTKQHQGGLLRLSQDWN*THLLPH Trigger: ATGGGGCAATAGATGAGTCCAGTTCCAGTCCTGGGA...AAGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | GACCTGAAGAAGCAGGTAATCACCCAGGCCTTGGATCCACAAACGTTCAGAAGTTCCTCCGGTCCTTCCTaGACAGATCTGACAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: DLKKQVITQALDPQTFRSSSGPS*TDLTGT Trigger: TGTACCTGTCAGATCTGTCCAGGAAGGACCGGAGGA...ACTTCTGAACGTTTGTGGATCCAAGGCCTGGGTGATTACCTGCTTCTTCAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | GCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTTAAGCCCAGGAGTACGTaGCCCAGGTTACTGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: ATLTVFSTKQHQGGLLRLKPRST*PRLLRI Trigger: TATTCTCAGTAACCTGGGCCACGTACTCCTGGGCTT...AAGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTCGAGTTTGCCAGGTGGCATGAGAGAAGAAAGCTCGAACATTGCGCTTAGGAGGCAAAGTCCCTaGGCCGGTAGATCAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSSSLPGGMREESSNIALRRQSP*AGRSIQ Trigger: TTGGATTGATCTACCGGCCCAGGGACTTTGCCTCCT...AAGCGCAATGTTCGAGCTTTCTTCTCTCATGCCACCTGGCAAACTCGAGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | TGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTCAGCTGCTGAGGTTCTaGAAGAAGAAGTACAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CYTHRVFHKTAPRWVAPSQLLRF*KKKYSA Trigger: GGCACTGTACTTCTTCTTCCAGAACCTCAGCAGCTG...AGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| 3UTR CAA 72 bp | GTCTCTGTGCGCAACAGGGCATCCCTTCTACCATTCTaGAGGTTTAGTTCAGTCCCAAGCTCTTCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSVRNRASLLPF*RFSSVPSSSCV Trigger: CACACAGGAAGAGCTTGGGACTGAACTAAACCTCAAGAATGGTAGAAGGGATGCCCTGTTGCGCACAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | GACCTGAAGAAGCAGGTAATCACCCAGGCCTTGGATCCACAAACGTTCAGAAGTGGCAGTGATGGGATGTaGGACAGCCATATTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLKKQVITQALDPQTFRSGSDGM*DSHISR Trigger: TCTGGAAATATGGCTGTCTCACATCCCATCACTGCC...ACTTCTGAACGTTTGTGGATCCAAGGCCTGGGTGATTACCTGCTTCTTCAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | AGTAGCTGGTTTCTCTGGTCAATATCTATGAGGATGGGAGGGGCCAGGTGGAGACAGCGATCATGTACATaGAGGAAGTGTCGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSWFLWSISMRMGGARWRQRSCT*RKCRTG Trigger: TCCAGTTCGACACTTCCTTCATGTACATGATCGCTG...TCTCCACCTGGCCCCTCCCATCCTCATAGATATTGACCAGAGAAACCAGCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TTCTATAGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGATGGCAGAGAAGATaGTCCAGAACCACACATCGT | + |
|
Preference number: 4 (lower is better) Translates to: FYSSRCLRGVEVATLKVLGWQRR*SRTTHR Trigger: ACGATGTGTGGTTCTGGATCATCTTCTCTGCCATCC...TAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCTATAGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | CGTCTGGCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCAACACCACGAAGAACTaGTCATCTGGAAAATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLAVGKLLHSPCFPQNSTNTTKN*SSGKSF Trigger: GAAGGATTTTCCAGATGAGCAGTTCTTCGTGGTGTT...GGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGCCAGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGCCATATACAGAGGTCTaGTGCATTGCTGGATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVGKLLHSPCFPQNSTKVPYTEV*CIAGYS Trigger: ACTGTATCCAGCAATGCAGCAGACCTCTGTATATGG...CACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACCACCATGGGGCGCCATaGACGCTACATCTACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSICVHLGAVRSLGRKRDHHGAP*TLHLQR Trigger: TCTTTGTAGATGTAGCGTCCATGGCGCCCCATGGTG...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATAGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTATTCCAGAGCCATCGCTaGAACCAAAGCTTCCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FYSSRCLRGVEVATLKVLFQSHR*NQSFRQ Trigger: TTGACGGAAGCTTTGGTTCCAGCGATGGCTCTGGAA...TAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCTATAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATAGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTACAGCTGCTGAGGTTCTaGAAGAAGAAGTACAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FYSSRCLRGVEVATLKVLQLLRF*KKKYSA Trigger: GGCACTGTACTTCTTCTTCCAGAACCTCAGCAGCTG...TAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCTATAGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TCTGATGACATCATACTCCACACAACCAGGAAGCCTGATCAAAATGGGGCTTCTGATGGCTGGTGTGGTTaGAGGAGTAGATGTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SDDIILHTTRKPDQNGASDGWCG*RSRCSR Trigger: CCGAGAACATCTACTCCTTCAACCACACCAGCCATC...AGAAGCCCCATTTTGATCAGGCTTCCTGGTTGTGTGGAGTATGATGTCATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGCCTTCTTCTGCAGCGTaGTGGCGGCTTTCTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IFSICVHLGAVRSLGRKRPSSAA*WRLSWS Trigger: TGACCAAGAAAGCCGCCATCACGCTGCAGAAGAAGG...CCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TCTGATGACATCATACTCCACACAACCAGGAAGCCTGATCAAAATGGGGCTTCTCAACAGCACCAGGAATaGGAAAAACAGGGCAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SDDIILHTTRKPDQNGASQQHQE*EKQGSR Trigger: GCGACTGCCCTGTTTTTCTCATTCCTGGTGCTGTTG...AGAAGCCCCATTTTGATCAGGCTTCCTGGTTGTGTGGAGTATGATGTCATCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | GCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTTACTGGACTCATCTATTaGCCCATAATTGCTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ATLTVFSTKQHQGGLLRLTGLIY*PIIAPF Trigger: GAAGGGAGCAATTATGGGGCAATAGATGAGTCCAGT...AAGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | GCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTTCCATATACAGAGGTCTaGTGCATTGCTGGATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ATLTVFSTKQHQGGLLRLPYTEV*CIAGYS Trigger: ACTGTATCCAGCAATGCAGCAGACCTCTGTATATGG...AAGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACGTCGCAGAGAGGAAGTaGCAGATGTCATGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FSICVHLGAVRSLGRKRDVAERK*QMSWSS Trigger: TGATGACCATGACATCTGGCACTTCCTCTCTGCGAC...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | GACCTGAAGAAGCAGGTAATCACCCAGGCCTTGGATCCACAAACGTTCAGAAGTAAGGGCCCGTCTCATTaGTTGCTTTTGAAGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: DLKKQVITQALDPQTFRSKGPSH*LLLKGI Trigger: TATGCCCTTCAAAAGCAACCAATGAGACGGGCCCTT...ACTTCTGAACGTTTGTGGATCCAAGGCCTGGGTGATTACCTGCTTCTTCAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | GACCTGAAGAAGCAGGTAATCACCCAGGCCTTGGATCCACAAACGTTCAGAAGTTCTTATACTTTTTGCTaGCAATCCTCCGGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLKKQVITQALDPQTFRSSYTFC*QSSGPS Trigger: GGAAGGACCGGAGGATTGTCAGCAAAAAGTATAAGA...ACTTCTGAACGTTTGTGGATCCAAGGCCTGGGTGATTACCTGCTTCTTCAGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTCGAGTTTGCCAGGTGGCATGAGAGAAGAAAGCTCGAACATTGCGCTTACTGGACTCATCTATTaGCCCATAATTGCTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSSSLPGGMREESSNIALTGLIY*PIIAPF Trigger: GAAGGGAGCAATTATGGGGCAATAGATGAGTCCAGT...AAGCGCAATGTTCGAGCTTTCTTCTCTCATGCCACCTGGCAAACTCGAGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | TCTGATGACATCATACTCCACACAACCAGGAAGCCTGATCAAAATGGGGCTTCTGTCGCAGAGAGGAAGTaGCAGATGTCATGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SDDIILHTTRKPDQNGASVAERK*QMSWSS Trigger: TGATGACCATGACATCTGGCACTTCCTCTCTGCGAC...AGAAGCCCCATTTTGATCAGGCTTCCTGGTTGTGTGGAGTATGATGTCATCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACAACACTTCTTTCTGCTaGCGAACCACAACCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FSICVHLGAVRSLGRKRDNTSFC*RTTTRT Trigger: AGTCCTGGTTGTGGTTCGCCAGCAGAAAGAAGTGTT...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATAGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTATTTCATTTTCCTGGATaGAGAATGATCCGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FYSSRCLRGVEVATLKVLFHFPG*RMIRHR Trigger: CCTGTGGCGGATCATTCTCCATCCAGGAAAATGAAA...TAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCTATAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | TGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTTGGTTTTCATTTTCCTaGATGGAGAATGATCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CYTHRVFHKTAPRWVAPSWFSFS*MENDPP Trigger: TGGCGGATCATTCTCCATCCAGGAAAATGAAAACCA...AGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGAGGAGGCAAAGTCCCTaGGCCGGTAGATCAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IFSICVHLGAVRSLGRKRRRQSP*AGRSIQ Trigger: TTGGATTGATCTACCGGCCCAGGGACTTTGCCTCCT...CCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTCATATACAGATTCTTTaGTGGATGGGACAATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CYTHRVFHKTAPRWVAPSHIQIL*WMGQWS Trigger: TGACCATTGTCCCATCCATCAAAGAATCTGTATATG...AGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACTCTTATACTTTTTGCTaGCAATCCTCCGGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSICVHLGAVRSLGRKRDSYTFC*QSSGPS Trigger: GGAAGGACCGGAGGATTGTCAGCAAAAAGTATAAGA...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGAAGAGCAGAGGGACCTaGCAGGACAACACTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFSICVHLGAVRSLGRKRKSRGT*QDNTSF Trigger: GAAAGAAGTGTTGTCCTGGCAGGTCCCTCTGCTCTT...CCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR GCA 90 bp | TCTGATGACATCATACTCCACACAACCAGGAAGCCTGATCAAAATGGGGCTTCTCTGCATCACAGGCAGTaGATAAAACACAGCGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDDIILHTTRKPDQNGASLHHRQ*IKHSDG Trigger: ACCATCGCTGTGTTTTATGCACTGCCTGTGATGCAG...AGAAGCCCCATTTTGATCAGGCTTCCTGGTTGTGTGGAGTATGATGTCATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGAACCACAACCAGGACTaGGTAGTCCAGGTTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IFSICVHLGAVRSLGRKRNHNQD*VVQVVR Trigger: TCTGACAACCTGGACTACCCAGTCCTGGTTGTGGTT...CCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | GACCTGAAGAAGCAGGTAATCACCCAGGCCTTGGATCCACAAACGTTCAGAAGTGTCCAGATCATACACTaGACACATGATGTTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLKKQVITQALDPQTFRSVQIIH*THDVLN Trigger: GTTCAGAACATCATGTGTCCAGTGTATGATCTGGAC...ACTTCTGAACGTTTGTGGATCCAAGGCCTGGGTGATTACCTGCTTCTTCAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGTCCCAGGACTGGAACTaGACTCATCTATTGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IFSICVHLGAVRSLGRKRSQDWN*THLLPH Trigger: ATGGGGCAATAGATGAGTCCAGTTCCAGTCCTGGGA...CCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGTCTGCCTCCCAGGACTaGAACTGGACTCATCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: IFSICVHLGAVRSLGRKRSASQD*NWTHLL Trigger: CAATAGATGAGTCCAGTTCCAGTCCTGGGAGGCAGA...CCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTTCAGTCTGTGGGATCTACAGAGAGGATTCTCAGGTACAAACTCAGACAAAAGAAAAACCTCACATaGTGGACAAGCACAACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLQSVGSTERILRYKLRQKKNLT*WTSTTS Trigger: GCTCGTTGTGCTTGTCCATCATGTGAGGTTTTTCTT...TTGTCTGAGTTTGTACCTGAGAATCCTCTCTGTAGATCCCACAGACTGAAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147032.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGTATACAGAGGTCTGCTaGATTGCTGGATACAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IFSICVHLGAVRSLGRKRYTEVC*IAGYSP Trigger: CGGACTGTATCCAGCAATGCAGCAGACCTCTGTATA...CCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACTGGTTTTCATTTTCCTaGATGGAGAATGATCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSICVHLGAVRSLGRKRDWFSFS*MENDPP Trigger: TGGCGGATCATTCTCCATCCAGGAAAATGAAAACCA...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| 3UTR CAA 72 bp | AAGCATTCGATTAACTTTTCGACAGAATGCTTCAGTTaGTTTTCAGACTCCGTGCTGGAAAGAGCTGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KHSINFSTECFS*FSDSVLERAGG Trigger: ACCGCCAGCTCTTTCCAGCACGGAGTCTGAAAACAAACTGAAGCATTCTGTCGAAAAGTTAATCGAATGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147032.2 |
||
| CDS-3UTR TCA 90 bp | TCTGATGACATCATACTCCACACAACCAGGAAGCCTGATCAAAATGGGGCTTCTCATATACAGATTCTTTaGTGGATGGGACAATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SDDIILHTTRKPDQNGASHIQIL*WMGQWS Trigger: TGACCATTGTCCCATCCATCAAAGAATCTGTATATG...AGAAGCCCCATTTTGATCAGGCTTCCTGGTTGTGTGGAGTATGATGTCATCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
||
| CDS-3UTR CCA 90 bp | GGATCTACAGAGAGGATTCTCAGGTACAAACTCAGACAAGTCACCTCACTGTTGAGATTCTTTGATGGATaGGACAATGGTCACTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSTERILRYKLRQVTSLLRFFDG*DNGHFQ Trigger: CTGAAAGTGACCATTGTCCCATCCATCAAAGAATCT...CAACAGTGAGGTGACTTGTCTGAGTTTGTACCTGAGAATCCTCTCTGTAGATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147032.2 |
||
| CDS-3UTR TCA 90 bp | GAGGATTCTCAGGTACAAACTCAGACAAGTCACCTCACTGTTGTGTTTTCACAGCATATACAGATTCTTTaGTGGATGGGACAATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EDSQVQTQTSHLTVVFSQHIQIL*WMGQWS Trigger: TGACCATTGTCCCATCCATCAAAGAATCTGTATATG...CTGTGAAAACACAACAGTGAGGTGACTTGTCTGAGTTTGTACCTGAGAATCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147032.2 |
||
| 3UTR CAA 72 bp | ATTCTCAGGTACAAACTCAGACAAGTCACCTCACTGTaGTGTTTTCACAGTGAAAACTCTACCAGCATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ILRYKLRQVTSL*CFHSENSTSML Trigger: TAGCATGCTGGTAGAGTTTTCACTGTGAAAACACAACAGTGAGGTGACTTGTCTGAGTTTGTACCTGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147032.2 |
||
| CDS CCA 90 bp | CGCGGATCGCGCCGCAGCTCTGCGGATTTCGCGAGGGGCTCTTCCTaGTGGCCAGGGACCGCCGCCCGCAGGAGCCAGGGCAGCGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGSRRSSADFARGSS*WPGTAARRSQGSAQ Trigger: CTGCGCGCTGCCCTGGCTCCTGCGGGCGGCGGTCCCTGGCCACCAGGAAGAGCCCCTCGCGAAATCCGCAGAGCTGCGGCGCGATCCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 90 bp | GGATCGCGCCGCAGCTCTGCGGATTTCGCGAGGGGCTCTTCCTGGTaGCCAGGGACCGCCGCCCGCAGGAGCCAGGGCAGCGCGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSRRSSADFARGSSW*PGTAARRSQGSAQS Trigger: GCTCTGCGCGCTGCCCTGGCTCCTGCGGGCGGCGGTCCCTGGCCACCAGGAAGAGCCCCTCGCGAAATCCGCAGAGCTGCGGCGCGATCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 90 bp | TTCTCCCGGGATTCTGCAGGGGTCCCCTCCCAGCTGCTGAGGTTCTaGAAGAAGAAGTACAGTGCCGCAGCCCACACCACGGCAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSRDSAGVPSQLLRF*KKKYSAAAHTTAVA Trigger: GGCCACTGCCGTGGTGTGGGCTGCGGCACTGTACTTCTTCTTCCAGAACCTCAGCAGCTGGGAGGGGACCCCTGCAGAATCCCGGGAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 90 bp | GGTTCTGGAAGAAGAAGTACAGTGCCGCAGCCCACACCACGGCAGTaGCCGCGATGCAGAAGACTGGTAGCGGGAGGACTTTCTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSGRRSTVPQPTPRQ*PRCRRLVAGGLSQS Trigger: GCTCTGAGAAAGTCCTCCCGCTACCAGTCTTCTGCATCGCGGCCACTGCCGTGGTGTGGGCTGCGGCACTGTACTTCTTCTTCCAGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS GCA 90 bp | AAGTCACTCTCCTCCACAGAGCTGTCCGTGTCTGAGTGGCAAGGCTaGCCACCATCGGAAGAAGACATCTGCCTCCCAGGACTGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: KSLSSTELSVSEWQG*PPSEEDICLPGLEL Trigger: CAGTTCCAGTCCTGGGAGGCAGATGTCTTCTTCCGATGGTGGGCAGCCTTGCCACTCAGACACGGACAGCTCTGTGGAGGAGAGTGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS TCA 90 bp | AGGCATGGTATCAAAGTCACTCTCCTCCACAGAGCTGTCCGTGTCTaGGTGGCAAGGCTGCCCACCATCGGAAGAAGACATCTGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RHGIKVTLLHRAVRV*VARLPTIGRRHLPP Trigger: GGGAGGCAGATGTCTTCTTCCGATGGTGGGCAGCCTTGCCACTCAGACACGGACAGCTCTGTGGAGGAGAGTGACTTTGATACCATGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGTTGTCAGAGGAACTGTaGACATGCACCCGCACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSRCLRGVEVATLKVLGGLSEEL*TCTRTA Trigger: AGCCGTGCGGGTGCATGTCAACAGTTCCTCTGACAA...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | TTGACTCCCTCCAGGCAGGTGGAGCGTCTGGCAGTGGGCAAGCTGCTACACTCAAAAGGGCCCGTCTCATaGGTTGCTTTTGAAGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LTPSRQVERLAVGKLLHSKGPVS*VAFEGH Trigger: ATGCCCTTCAAAAGCAACCAATGAGACGGGCCCTTT...TGAGTGTAGCAGCTTGCCCACTGCCAGACGCTCCACCTGCCTGGAGGGAGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS TCA 90 bp | TGCCCCATAATTGCTCCCTTCGGGCGTGCTGGCAGTGATGGGATGTaGGACAGCCATATTTCCAGAGCCATCGCTGGAACCAAAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPIIAPFGRAGSDGM*DSHISRAIAGTKAS Trigger: GGAAGCTTTGGTTCCAGCGATGGCTCTGGAAATATGGCTGTCTCACATCCCATCACTGCCAGCACGCCCGAAGGGAGCAATTATGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 90 bp | CTGCCAGGACAACACTTCTTTCTGCTGGCGAACCACAACCAGGACTaGGTAGTCCAGGTTGTCAGAGGAACTGTTGACATGCACCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPGQHFFLLANHNQD*VVQVVRGTVDMHPH Trigger: GTGCGGGTGCATGTCAACAGTTCCTCTGACAACCTGGACTACCCAGTCCTGGTTGTGGTTCGCCAGCAGAAAGAAGTGTTGTCCTGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 90 bp | ATGGTATCAAAGTCACTCTCCTCCACAGAGCTGTCCGTGTCTGAGTaGCAAGGCTGCCCACCATCGGAAGAAGACATCTGCCTCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MVSKSLSSTELSVSE*QGCPPSEEDICLPG Trigger: TCCTGGGAGGCAGATGTCTTCTTCCGATGGTGGGCAGCCTTGCCACTCAGACACGGACAGCTCTGTGGAGGAGAGTGACTTTGATACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS GCA 90 bp | TGGGCACCATGGGGCGCCATGGACGCTACATCTACAAAGATCAGCTaGTCCAAAGGGCCCGTCTCATTGGTTGCTTTTGAAGGGCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: WAPWGAMDATSTKIS*SKGPVSLVAFEGHR Trigger: TCTATGCCCTTCAAAAGCAACCAATGAGACGGGCCCTTTGGAGCAGCTGATCTTTGTAGATGTAGCGTCCATGGCGCCCCATGGTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | CGTCTGGCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCGGCCCGTCTCATTGGTaGCTTTTGAAGGGCATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLAVGKLLHSPCFPQNSTGPSHW*LLKGIE Trigger: CTCTATGCCCTTCAAAAGCAACCAATGAGACGGGCC...GGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGCCAGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGAAAGGGCCCGTCTCATaGGTTGCTTTTGAAGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSRCLRGVEVATLKVLGGKGPVS*VAFEGH Trigger: ATGCCCTTCAAAAGCAACCAATGAGACGGGCCCTTT...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS TCA 90 bp | ACTCATCTATTGCCCCATAATTGCTCCCTTCGGGCGTGCTGGCAGTaGTGGGATGTGAGACAGCCATATTTCCAGAGCCATCGCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: THLLPHNCSLRACWQ*WDVRQPYFQSHRWN Trigger: GTTCCAGCGATGGCTCTGGAAATATGGCTGTCTCACATCCCATCACTGCCAGCACGCCCGAAGGGAGCAATTATGGGGCAATAGATGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | GCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTTTTGTCAGAGGAACTGTaGACATGCACCCGCACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATLTVFSTKQHQGGLLRLLSEEL*TCTRTA Trigger: AGCCGTGCGGGTGCATGTCAACAGTTCCTCTGACAA...AAGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | CGTCTGGCAGTGGGCAAGCTGCTACACTCACCGTGTTTTCCACAAAACAGCACCTCTCATTGGTTGCTTTaGAAGGGCATAGAGTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLAVGKLLHSPCFPQNSTSHWLL*KGIECG Trigger: GCCGCACTCTATGCCCTTCAAAAGCAACCAATGAGA...GGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCAGCTTGCCCACTGCCAGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGCTGGTTTCTCTGGTCAATATCTATGAGGATGGGAGGGGCCAGGTGGAGAGCCCATGTAGTAGATTaGGGTGCTGAGGGCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSWFLWSISMRMGGARWRAHVVD*GAEGQR Trigger: TCTCTGGCCCTCAGCACCCAAATCTACTACATGGGC...TCTCCACCTGGCCCCTCCCATCCTCATAGATATTGACCAGAGAAACCAGCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 90 bp | CCGTATTCCATAGCAAAGATGTCTTTAGCTTCCAGGGCTCTTCGGTaGAGAAGGTCTCTGCGCAGAACTATCAGCAGGAAGAGGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PYSIAKMSLASRALR*RRSLRRTISRKRKP Trigger: GGGCTTCCTCTTCCTGCTGATAGTTCTGCGCAGAGACCTTCTCCACCGAAGAGCCCTGGAAGCTAAAGACATCTTTGCTATGGAATACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGTTACTGAGAATATTATaGAAGGCGCTCAGGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRCLRGVEVATLKVLGGLLRIL*KALRTP Trigger: GGGTGTCCTGAGCGCCTTCAATAATATTCTCAGTAA...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | TTCTATAGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGCCCATGTAGTAGATTaGGGTGCTGAGGGCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FYSSRCLRGVEVATLKVLAHVVD*GAEGQR Trigger: TCTCTGGCCCTCAGCACCCAAATCTACTACATGGGC...TAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCTATAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS TCA 90 bp | AAGGGCCCGTCTCATTGGTTGCTTTTGAAGGGCATAGAGTGCGGCTaGCTTCCTGGTAGTTGTAGCTCCTTTGGTATAGTCCTTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGPSHWLLLKGIECG*LPGSCSSFGIVLGR Trigger: TCTTCCAAGGACTATACCAAAGGAGCTACAACTACCAGGAAGTCAGCCGCACTCTATGCCCTTCAAAAGCAACCAATGAGACGGGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAGGTGGGACATATACAGATTCTTaGATGGATGGGACAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSRCLRGVEVATLKVLGGTYTDS*MDGTMV Trigger: GACCATTGTCCCATCCATCAAAGAATCTGTATATGT...CCCACCTAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACCAGAGGTCTGCTGCATaGCTGGATACAGTCCGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FSICVHLGAVRSLGRKRDQRSAA*LDTVRV Trigger: TACACGGACTGTATCCAGCAATGCAGCAGACCTCTG...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACTCTCATTGGTTGCTTTaGAAGGGCATAGAGTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSICVHLGAVRSLGRKRDSHWLL*KGIECG Trigger: GCCGCACTCTATGCCCTTCAAAAGCAACCAATGAGA...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | TGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTAACTGGACTCATCTATaGCCCCATAATTGCTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CYTHRVFHKTAPRWVAPSNWTHL*PHNCSL Trigger: AAGGGAGCAATTATGGGGCAATAGATGAGTCCAGTT...AGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | TGCTACACTCACCGTGTTTTCCACAAAACAGCACCAAGGTGGGTTGCTCCGTCTCCATTGAATTCCACATaGTGGTCCAGATCATACACT | + |
|
Preference number: 5 (lower is better) Translates to: CYTHRVFHKTAPRWVAPSPLNST*WSRSYT Trigger: AGTGTATGATCTGGACCACAATGTGGAATTCAATGG...AGACGGAGCAACCCACCTTGGTGCTGTTTTGTGGAAAACACGGTGAGTGTAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGCTGGTTTCTCTGGTCAATATCTATGAGGATGGGAGGGGCCAGGTGGAGATCACTTTCAGGTTCTTaGATCGTTGTAGATTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSWFLWSISMRMGGARWRSLSGS*IVVDSR Trigger: CCTGGAATCTACAACGATCAAAGAACCTGAAAGTGA...TCTCCACCTGGCCCCTCCCATCCTCATAGATATTGACCAGAGAAACCAGCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | TTCTATAGCAGCAGGTGTCTCAGAGGTGTGGAAGTGGCCACACTGAAGGTTCTAAACTGGACTCATCTATaGCCCCATAATTGCTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FYSSRCLRGVEVATLKVLNWTHL*PHNCSL Trigger: AAGGGAGCAATTATGGGGCAATAGATGAGTCCAGTT...TAGAACCTTCAGTGTGGCCACTTCCACACCTCTGAGACACCTGCTGCTATAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGCAGAGGTCTGCTGCATaGCTGGATACAGTCCGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IFSICVHLGAVRSLGRKRQRSAA*LDTVRV Trigger: TACACGGACTGTATCCAGCAATGCAGCAGACCTCTG...CCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS TCA 90 bp | CTTATACTTTTTGCTGACAATCCTCCGGTCCTTCCTGGACAGATCTaGCAGGTACAAGAACATCTTGGTCCGGATGACGTTTTTGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LILFADNPPVLPGQI*QVQEHLGPDDVFVA Trigger: AGCGACAAAAACGTCATCCGGACCAAGATGTTCTTGTACCTGTCAGATCTGTCCAGGAAGGACCGGAGGATTGTCAGCAAAAAGTATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACTTACTGAGAATATTATaGAAGGCGCTCAGGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: FSICVHLGAVRSLGRKRDLLRIL*KALRTP Trigger: GGGTGTCCTGAGCGCCTTCAATAATATTCTCAGTAA...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGCTGGTTTCTCTGGTCAATATCTATGAGGATGGGAGGGGCCAGGTGGAGAAAGAGACCAAAGTGTTaGGGAATACCGTATTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: SSWFLWSISMRMGGARWRKRPKC*GIPYSI Trigger: TATGGAATACGGTATTCCCAAACACTTTGGTCTCTT...TCTCCACCTGGCCCCTCCCATCCTCATAGATATTGACCAGAGAAACCAGCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS TCA 90 bp | GTCCAGATCATACACTGGACACATGATGTTCTGAACGGAGACAACTaGACACGGGTAAGCCTTCTCAGACACCACTTTAATGATAACGGA | + |
|
Preference number: 5 (lower is better) Translates to: VQIIHWTHDVLNGDN*TRVSLLRHHFNDNG Trigger: TCCGTTATCATTAAAGTGGTGTCTGAGAAGGCTTACCCGTGTTCAGTTGTCTCCGTTCAGAACATCATGTGTCCAGTGTATGATCTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACTCACTTTCAGGTTCTTaGATCGTTGTAGATTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSICVHLGAVRSLGRKRDSLSGS*IVVDSR Trigger: CCTGGAATCTACAACGATCAAAGAACCTGAAAGTGA...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATGACATCATACTCCACACAACCAGGAAGCCTGATCAAAATGGGGCTTCTCCATTGAATTCCACATaGTGGTCCAGATCATACACT | + |
|
Preference number: 5 (lower is better) Translates to: SDDIILHTTRKPDQNGASPLNST*WSRSYT Trigger: AGTGTATGATCTGGACCACAATGTGGAATTCAATGG...AGAAGCCCCATTTTGATCAGGCTTCCTGGTTGTGTGGAGTATGATGTCATCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGGACACATATACAGATTCTTaGATGGATGGGACAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSICVHLGAVRSLGRKRDTYTDS*MDGTMV Trigger: GACCATTGTCCCATCCATCAAAGAATCTGTATATGT...GTCCCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTTCAGTCTGTGGGATCTACAGAGAGGATTCTCAGGTACAAACTCAGACAAACATATACAGATTCTTaGATGGATGGGACAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLQSVGSTERILRYKLRQTYTDS*MDGTMV Trigger: GACCATTGTCCCATCCATCAAAGAATCTGTATATGT...TTGTCTGAGTTTGTACCTGAGAATCCTCTCTGTAGATCCCACAGACTGAAGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147032.2 |
||
| CDS-3UTR CAA 90 bp | ATTTTCTCCATCTGTGTCCATCTTGGAGCTGTTAGAAGTCTAGGGAGAAAGAGGAAGAGACCAAAGTGTTaGGGAATACCGTATTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: IFSICVHLGAVRSLGRKRKRPKC*GIPYSI Trigger: TATGGAATACGGTATTCCCAAACACTTTGGTCTCTT...CCTCTTTCTCCCTAGACTTCTAACAGCTCCAAGATGGACACAGATGGAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 72 bp | CGCAGCTCTGCGGATTTCGCGAGGGGCTCTTCCTGGTaGCCAGGGACCGCCGCCCGCAGGAGCCAGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSADFARGSSW*PGTAARRSQGS Trigger: GCTGCCCTGGCTCCTGCGGGCGGCGGTCCCTGGCCACCAGGAAGAGCCCCTCGCGAAATCCGCAGAGCTGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS GCA 72 bp | CAGCAGGACACACTCACGGTTCTTCTCCCGGGATTCTaGAGGGGTCCCCTCCCAGCTGCTGAGGTTCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QQDTLTVLLPGF*RGPLPAAEVLE Trigger: TTCCAGAACCTCAGCAGCTGGGAGGGGACCCCTGCAGAATCCCGGGAGAAGAACCGTGAGTGTGTCCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 72 bp | AGAAGAAGTACAGTGCCGCAGCCCACACCACGGCAGTaGCCGCGATGCAGAAGACTGGTAGCGGGAGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: RRSTVPQPTPRQ*PRCRRLVAGGL Trigger: AAGTCCTCCCGCTACCAGTCTTCTGCATCGCGGCCACTGCCGTGGTGTGGGCTGCGGCACTGTACTTCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 72 bp | GATTCTGCAGGGGTCCCCTCCCAGCTGCTGAGGTTCTaGAAGAAGAAGTACAGTGCCGCAGCCCACACCACG | + |
|
Preference number: 6 (lower is better) Translates to: DSAGVPSQLLRF*KKKYSAAAHTT Trigger: CGTGGTGTGGGCTGCGGCACTGTACTTCTTCTTCCAGAACCTCAGCAGCTGGGAGGGGACCCCTGCAGAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS GCA 72 bp | TCCTCCACAGAGCTGTCCGTGTCTGAGTGGCAAGGCTaGCCACCATCGGAAGAAGACATCTGCCTCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSTELSVSEWQG*PPSEEDICLPG Trigger: TCCTGGGAGGCAGATGTCTTCTTCCGATGGTGGGCAGCCTTGCCACTCAGACACGGACAGCTCTGTGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS TCA 72 bp | ATTGCTCCCTTCGGGCGTGCTGGCAGTGATGGGATGTaGGACAGCCATATTTCCAGAGCCATCGCTGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: IAPFGRAGSDGM*DSHISRAIAGT Trigger: GGTTCCAGCGATGGCTCTGGAAATATGGCTGTCTCACATCCCATCACTGCCAGCACGCCCGAAGGGAGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 72 bp | AAGTCACTCTCCTCCACAGAGCTGTCCGTGTCTGAGTaGCAAGGCTGCCCACCATCGGAAGAAGACATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KSLSSTELSVSE*QGCPPSEEDIC Trigger: GCAGATGTCTTCTTCCGATGGTGGGCAGCCTTGCCACTCAGACACGGACAGCTCTGTGGAGGAGAGTGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS TCA 72 bp | TTGCCCCATAATTGCTCCCTTCGGGCGTGCTGGCAGTaGTGGGATGTGAGACAGCCATATTTCCAGAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LPHNCSLRACWQ*WDVRQPYFQSH Trigger: ATGGCTCTGGAAATATGGCTGTCTCACATCCCATCACTGCCAGCACGCCCGAAGGGAGCAATTATGGGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 72 bp | GCCCACCATCGGAAGAAGACATCTGCCTCCCAGGACTaGAACTGGACTCATCTATTGCCCCATAATTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AHHRKKTSASQD*NWTHLLPHNCS Trigger: GGAGCAATTATGGGGCAATAGATGAGTCCAGTTCCAGTCCTGGGAGGCAGATGTCTTCTTCCGATGGTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS GCA 72 bp | TGGGGCGCCATGGACGCTACATCTACAAAGATCAGCTaGTCCAAAGGGCCCGTCTCATTGGTTGCTTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: WGAMDATSTKIS*SKGPVSLVAFE Trigger: TTCAAAAGCAACCAATGAGACGGGCCCTTTGGAGCAGCTGATCTTTGTAGATGTAGCGTCCATGGCGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CAA 90 bp | CACAATGAGCAACACCATCCTGTCCATATACAGAGGTCTGCTGCATaGCTGGATACAGTCCGTGTAGAACACCATAGCAGCCCGCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HNEQHHPVHIQRSAA*LDTVRVEHHSSPPE Trigger: TTCCGGCGGGCTGCTATGGTGTTCTACACGGACTGTATCCAGCAATGCAGCAGACCTCTGTATATGGACAGGATGGTGTTGCTCATTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 72 bp | CAACACTTCTTTCTGCTGGCGAACCACAACCAGGACTaGGTAGTCCAGGTTGTCAGAGGAACTGTTGACATG | + |
|
Preference number: 6 (lower is better) Translates to: QHFFLLANHNQD*VVQVVRGTVDM Trigger: CATGTCAACAGTTCCTCTGACAACCTGGACTACCCAGTCCTGGTTGTGGTTCGCCAGCAGAAAGAAGTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CAA 72 bp | TCTACAAAGATCAGCTGCTCCAAAGGGCCCGTCTCATaGGTTGCTTTTGAAGGGCATAGAGTGCGGCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: STKISCSKGPVS*VAFEGHRVRLT Trigger: AGTCAGCCGCACTCTATGCCCTTCAAAAGCAACCAATGAGACGGGCCCTTTGGAGCAGCTGATCTTTGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CCA 72 bp | ATAGCAAAGATGTCTTTAGCTTCCAGGGCTCTTCGGTaGAGAAGGTCTCTGCGCAGAACTATCAGCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IAKMSLASRALR*RRSLRRTISRK Trigger: CTTCCTGCTGATAGTTCTGCGCAGAGACCTTCTCCACCGAAGAGCCCTGGAAGCTAAAGACATCTTTGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
||
| CDS CAA 72 bp | CAACACCATCCTGTCCATATACAGAGGTCTGCTGCATaGCTGGATACAGTCCGTGTAGAACACCATAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QHHPVHIQRSAA*LDTVRVEHHSS Trigger: GCTGCTATGGTGTTCTACACGGACTGTATCCAGCAATGCAGCAGACCTCTGTATATGGACAGGATGGTGTTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS CAA 90 bp | GACAGATCTGACAGGTACAAGAACATCTTGGTCCGGATGACGTTTTaGTCGCTTTCGATGTCAGGCATGGTATCAAAGTCACTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: DRSDRYKNILVRMTF*SLSMSGMVSKSLSS Trigger: GGAGGAGAGTGACTTTGATACCATGCCTGACATCGAAAGCGACAAAAACGTCATCCGGACCAAGATGTTCTTGTACCTGTCAGATCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS TCA 72 bp | TCTCATTGGTTGCTTTTGAAGGGCATAGAGTGCGGCTaGCTTCCTGGTAGTTGTAGCTCCTTTGGTATAGTC | + |
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Preference number: 6 (lower is better) Translates to: SHWLLLKGIECG*LPGSCSSFGIV Trigger: GACTATACCAAAGGAGCTACAACTACCAGGAAGTCAGCCGCACTCTATGCCCTTCAAAAGCAACCAATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS TCA 72 bp | ATTCCACATTGTGGTCCAGATCATACACTGGACACATaGTGTTCTGAACGGAGACAACTGAACACGGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: IPHCGPDHTLDT*CSERRQLNTGK Trigger: CTTACCCGTGTTCAGTTGTCTCCGTTCAGAACATCATGTGTCCAGTGTATGATCTGGACCACAATGTGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS TCA 72 bp | ACAGATCTGACAGGTACAAGAACATCTTGGTCCGGATaGCGTTTTTGTCGCTTTCGATGTCAGGCATGGTAT | + |
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Preference number: 6 (lower is better) Translates to: TDLTGTRTSWSG*RFCRFRCQAWY Trigger: ATACCATGCCTGACATCGAAAGCGACAAAAACGTCATCCGGACCAAGATGTTCTTGTACCTGTCAGATCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS CAA 72 bp | GACAGGTACAAGAACATCTTGGTCCGGATGACGTTTTaGTCGCTTTCGATGTCAGGCATGGTATCAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: DRYKNILVRMTF*SLSMSGMVSKS Trigger: TGACTTTGATACCATGCCTGACATCGAAAGCGACAAAAACGTCATCCGGACCAAGATGTTCTTGTACCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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| CDS TCA 72 bp | ATACACTGGACACATGATGTTCTGAACGGAGACAACTaGACACGGGTAAGCCTTCTCAGACACCACTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: IHWTHDVLNGDN*TRVSLLRHHFN Trigger: ATTAAAGTGGTGTCTGAGAAGGCTTACCCGTGTTCAGTTGTCTCCGTTCAGAACATCATGTGTCCAGTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047446.13 ENSMUST00000136381.8 |
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