Pregenerated sensors for SIAH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091722Ensembl transcript IDs: ENSMUST00000164848.3
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACAGCTATGGAGGCCCTGGGCTGCAGGCAAGGAGCCACACGAACTaGTCTCTCCCAGGGCTGACCCACCAGCCTTGGGTCTGGGCCATC | + |
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Preference number: 1 (lower is better) Translates to: DSYGGPGLQARSHTN*SLPGLTHQPWVWAI Trigger: GATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCAGTTCGTGTGGCTCCTTGCCTGCAGCCCAGGGCCTCCATAGCTGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CCA 90 bp | AGGAGCCACACGAACTGGTCTCTCCCAGGGCTGACCCACCAGCCTTaGGTCTGGGCCATCCACGGTTGGTTGCTAATGGCCTGGAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: RSHTNWSLPGLTHQP*VWAIHGWLLMAWSC Trigger: GCAGCTCCAGGCCATTAGCAACCAACCGTGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCAGTTCGTGTGGCTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CCA 90 bp | CCTGAAACTAAGCGTTCACTTGGAGGCTGGCCAGGCCGGCCCAGCTaGTGTGCCCGAGGTAAGGGAATGAGCTGGAGAAAGGCCCACACA | + |
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Preference number: 1 (lower is better) Translates to: PETKRSLGGWPGRPS*CARGKGMSWRKAHT Trigger: TGTGTGGGCCTTTCTCCAGCTCATTCCCTTACCTCGGGCACACCAGCTGGGCCGGCCTGGCCAGCCTCCAAGTGAACGCTTAGTTTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CCA 90 bp | CTCCCAGGGCTGACCCACCAGCCTTGGGTCTGGGCCATCCACGGTTaGTTGCTAATGGCCTGGAGCTGCATATGTAATAGCTCCCATGGC | + |
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Preference number: 1 (lower is better) Translates to: LPGLTHQPWVWAIHG*LLMAWSCICNSSHG Trigger: GCCATGGGAGCTATTACATATGCAGCTCCAGGCCATTAGCAACCAACCGTGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CCA 90 bp | CACACGAACTGGTCTCTCCCAGGGCTGACCCACCAGCCTTGGGTCTaGGCCATCCACGGTTGGTTGCTAATGGCCTGGAGCTGCATATGT | + |
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Preference number: 1 (lower is better) Translates to: HTNWSLPGLTHQPWV*AIHGWLLMAWSCIC Trigger: ACATATGCAGCTCCAGGCCATTAGCAACCAACCGTGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCAGTTCGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CCA 90 bp | AGAAGACCTGTGGCTTCTGACGCCTTTAGACAGCTATGGAGGCCCTaGGCTGCAGGCAAGGAGCCACACGAACTGGTCTCTCCCAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: RRPVASDAFRQLWRP*AAGKEPHELVSPRA Trigger: AGCCCTGGGAGAGACCAGTTCGTGTGGCTCCTTGCCTGCAGCCCAGGGCCTCCATAGCTGTCTAAAGGCGTCAGAAGCCACAGGTCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CCA 90 bp | GAAGCCAGGAGAAGACCTGTGGCTTCTGACGCCTTTAGACAGCTATaGAGGCCCTGGGCTGCAGGCAAGGAGCCACACGAACTGGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: EARRRPVASDAFRQL*RPWAAGKEPHELVS Trigger: AGAGACCAGTTCGTGTGGCTCCTTGCCTGCAGCCCAGGGCCTCCATAGCTGTCTAAAGGCGTCAGAAGCCACAGGTCTTCTCCTGGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CCA 90 bp | GGGAAGGCTTTAAGGTGTCCAAGTCAGAACAGAAAGAAGGCAGCGTaGAGATCCCCACTTTCTTCCACTGCAGGAAGCCCTCCCCCACCT | + |
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Preference number: 1 (lower is better) Translates to: GKALRCPSQNRKKAA*RSPLSSTAGSPPPP Trigger: AGGTGGGGGAGGGCTTCCTGCAGTGGAAGAAAGTGGGGATCTCCACGCTGCCTTCTTTCTGTTCTGACTTGGACACCTTAAAGCCTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR TCA 90 bp | ACCGTTGAGTGTCTGGGTTCAGAATCTTGGAGCAAGAGACCTGCCTaGGAGTGGGTGAAAGAGACAGACACCAGGCTACTGAGACCTCCA | + |
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Preference number: 1 (lower is better) Translates to: TVECLGSESWSKRPA*EWVKETDTRLLRPP Trigger: TGGAGGTCTCAGTAGCCTGGTGTCTGTCTCTTTCACCCACTCTCAGGCAGGTCTCTTGCTCCAAGATTCTGAACCCAGACACTCAACGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR GCA 90 bp | CCTTGGGTCTGGGCCATCCACGGTTGGTTGCTAATGGCCTGGAGCTaGATATGTAATAGCTCCCATGGCACACAAACCTTTCCTTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: PWVWAIHGWLLMAWS*ICNSSHGTQTFPWQ Trigger: TTGCCAAGGAAAGGTTTGTGTGCCATGGGAGCTATTACATATGCAGCTCCAGGCCATTAGCAACCAACCGTGGATGGCCCAGACCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR TCA 90 bp | GTGCTCGGCTTCTTGGTAACAGTGGTGCTTGCCCTTTGGCGGCAGTaGAGAAAGGGACTAACAGTGGTGGAAAATAACTACTCTGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: VLGFLVTVVLALWRQ*RKGLTVVENNYSGR Trigger: TCTGCCAGAGTAGTTATTTTCCACCACTGTTAGTCCCTTTCTTCACTGCCGCCAAAGGGCAAGCACCACTGTTACCAAGAAGCCGAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR TCA 90 bp | GTAGCTGCAGGAGTGTTAGCTCTATCCCAGGGTCCATGTGCAGACTaGCTGAACAATCTTCATTGTACTGCTAAACCTCCAGCAGTCATT | + |
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Preference number: 1 (lower is better) Translates to: VAAGVLALSQGPCAD*LNNLHCTAKPPAVI Trigger: AATGACTGCTGGAGGTTTAGCAGTACAATGAAGATTGTTCAGTCAGTCTGCACATGGACCCTGGGATAGAGCTAACACTCCTGCAGCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR GCA 90 bp | GGGCTAGCTCTCCAGCGGGGAGGTCCGGCTTGCTTTTCCCTGCGGTaGTTATGTTTGATGATGGATCTTATTTATAAACTATCAACAAAC | + |
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Preference number: 1 (lower is better) Translates to: GLALQRGGPACFSLR*LCLMMDLIYKLSTN Trigger: GTTTGTTGATAGTTTATAAATAAGATCCATCATCAAACATAAGCACCGCAGGGAAAAGCAAGCCGGACCTCCCCGCTGGAGAGCTAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR TCA 90 bp | AGACCGGGTGACTGGAAAGGACTGTGTTTTCATCTTTCTGTAAATTaGTGCTTCGGGTATGGGTGCACAGCAAAAGTGGCTGGAAGATCA | + |
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Preference number: 1 (lower is better) Translates to: RPGDWKGLCFHLSVN*CFGYGCTAKVAGRS Trigger: TGATCTTCCAGCCACTTTTGCTGTGCACCCATACCCGAAGCATCAATTTACAGAAAGATGAAAACACAGTCCTTTCCAGTCACCCGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR TCA 90 bp | TCTAGACCCTCTACTAAAACATATACATTCCTCAAAGAGTACCGTTaGGTGTCTGGGTTCAGAATCTTGGAGCAAGAGACCTGCCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: SRPSTKTYTFLKEYR*VSGFRILEQETCLR Trigger: TCTCAGGCAGGTCTCTTGCTCCAAGATTCTGAACCCAGACACTCAACGGTACTCTTTGAGGAATGTATATGTTTTAGTAGAGGGTCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR TCA 90 bp | CTTCTGCAAATGCTGACCTATTCCAAAGCAACCATGTTTATGTACTaGGCAGGGATACAGCGTGTGTTAGAGAGTAAAGAAAGGAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: LLQMLTYSKATMFMY*AGIQRVLESKERSW Trigger: CCAACTCCTTTCTTTACTCTCTAACACACGCTGTATCCCTGCTCAGTACATAAACATGGTTGCTTTGGAATAGGTCAGCATTTGCAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CCA 90 bp | CACTTATTAGTTTGGAGAGAAAAGTCATCTTGGGAGCACCGTAGTTaGAGGAGAAGGACACATTCCCTAGCCTTTATTTTGGAGATTTCT | + |
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Preference number: 1 (lower is better) Translates to: HLLVWREKSSWEHRS*RRRTHSLAFILEIS Trigger: AGAAATCTCCAAAATAAAGGCTAGGGAATGTGTCCTTCTCCTCCAACTACGGTGCTCCCAAGATGACTTTTCTCTCCAAACTAATAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR GCA 90 bp | AGAGCAATAGCACTCAAACGCACACTCTTTTGTTTGGTCTTAGCTTaGTCCTTTGTCTTCTGTTCTTCACTTATTAGTTTGGAGAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: RAIALKRTLFCLVLA*SFVFCSSLISLERK Trigger: TTTTCTCTCCAAACTAATAAGTGAAGAACAGAAGACAAAGGAGCAAGCTAAGACCAAACAAAAGAGTGTGCGTTTGAGTGCTATTGCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CAA 90 bp | AAGGAGCCACACGAACTGGTCTCTCCCAGGGCTGACCCACCAGCCTaGGGTCTGGGCCATCCACGGTTGGTTGCTAATGGCCTGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KEPHELVSPRADPPA*GLGHPRLVANGLEL Trigger: CAGCTCCAGGCCATTAGCAACCAACCGTGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCAGTTCGTGTGGCTCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR TCA 90 bp | ACAATCTGCCTGAAACTAAGCGTTCACTTGGAGGCTGGCCAGGCCGGCCCAGCTAGGTGGGGTAGTGGGTaGGGTTGGGGGTTCGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TICLKLSVHLEAGQAGPARWGSG*GWGFVG Trigger: ACCCACGAACCCCCAACCTCACCCACTACCCCACCT...AGCTGGGCCGGCCTGGCCAGCCTCCAAGTGAACGCTTAGTTTCAGGCAGATTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR GCA 90 bp | CTAAGCGTTCACTTGGAGGCTGGCCAGGCCGGCCCAGCTGGTGTGCCCGAGGTATTTAGAGGTCCAAGGTaGACAGGATATCCAGCGGCT | + |
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Preference number: 2 (lower is better) Translates to: LSVHLEAGQAGPAGVPEVFRGPR*TGYPAA Trigger: AGCCGCTGGATATCCTGTGCACCTTGGACCTCTAAA...TACCTCGGGCACACCAGCTGGGCCGGCCTGGCCAGCCTCCAAGTGAACGCTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR GCA 90 bp | CTAAGCGTTCACTTGGAGGCTGGCCAGGCCGGCCCAGCTGGTGTGCCCGAGGTAGGAGGCAATGTCTCATaGTCCTGCAGCTTATCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LSVHLEAGQAGPAGVPEVGGNVS*SCSLSL Trigger: CAAGGATAAGCTGCAGGAGCATGAGACATTGCCTCC...TACCTCGGGCACACCAGCTGGGCCGGCCTGGCCAGCCTCCAAGTGAACGCTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR GCA 90 bp | ACAATCTGCCTGAAACTAAGCGTTCACTTGGAGGCTGGCCAGGCCGGCCCAGCTCCCACTTTCTTCCACTaGAGGAAGCCCTCCCCCACC | + |
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Preference number: 2 (lower is better) Translates to: TICLKLSVHLEAGQAGPAPTFFH*RKPSPT Trigger: GGTGGGGGAGGGCTTCCTGCAGTGGAAGAAAGTGGG...AGCTGGGCCGGCCTGGCCAGCCTCCAAGTGAACGCTTAGTTTCAGGCAGATTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR CCA 90 bp | ACAATCTGCCTGAAACTAAGCGTTCACTTGGAGGCTGGCCAGGCCGGCCCAGCTGTGGGTGATGGGGAGTaGAGGGCAAGGTGCGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: TICLKLSVHLEAGQAGPAVGDGE*RARCVS Trigger: GGAAACGCACCTTGCCCTCCACTCCCCATCACCCAC...AGCTGGGCCGGCCTGGCCAGCCTCCAAGTGAACGCTTAGTTTCAGGCAGATTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CAA 90 bp | CCAGGGCTGACCCACCAGCCTTGGGTCTGGGCCATCCACGGTTGGTaGCTAATGGCCTGGAGCTGCATATGTAATAGCTCCCATGGCACA | + |
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Preference number: 2 (lower is better) Translates to: PGLTHQPWVWAIHGW*LMAWSCICNSSHGT Trigger: TGTGCCATGGGAGCTATTACATATGCAGCTCCAGGCCATTAGCAACCAACCGTGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGACAGAAAGGAAGTTGCAGACATGTGGCCCCACTGGGAAGGCTTTAAGGTTGGGGGTTCGTGGGTaGTGGGGAGTGGAGGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: PVTERKLQTCGPTGKALRLGVRG*WGVEGK Trigger: CTTGCCCTCCACTCCCCATCACCCACGAACCCCCAA...CCTTAAAGCCTTCCCAGTGGGGCCACATGTCTGCAACTTCCTTTCTGTCACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR GCA 90 bp | CACGAACTGGTCTCTCCCAGGGCTGACCCACCAGCCTTGGGTCTGGGCCATCCATGGCTGCATCTCTGGTaGATCTTACTTATCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: HELVSPRADPPALGLGHPWLHLW*ILLILP Trigger: AGGCAGGATAAGTAAGATGCACCAGAGATGCAGCCA...TGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCAGTTCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGCCATGTTTTCCCCTAGCACCTGGCCAGTGACAGAAAGGAAGTTGCAGACAGAGGTTGGGGGTTCGTaGGTGATGGGGAGTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LAMFSPSTWPVTERKLQTEVGGS*VMGSGG Trigger: CCCTCCACTCCCCATCACCCACGAACCCCCAACCTC...TGTCTGCAACTTCCTTTCTGTCACTGGCCAGGTGCTAGGGGAAAACATGGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR CCA 90 bp | GATACATTTAGTACTGAGATACTACAGCGGGGTTTCCATGCTGTCCACACTGGGCCAGGCCGGCCCAGCTaGTGTGCCCGAGGTAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: DTFSTEILQRGFHAVHTGPGRPS*CARGKG Trigger: TCCCTTACCTCGGGCACACCAGCTGGGCCGGCCTGG...CCCAGTGTGGACAGCATGGAAACCCCGCTGTAGTATCTCAGTACTAAATGTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR CCA 90 bp | GATACATTTAGTACTGAGATACTACAGCGGGGTTTCCATGCTGTCCACACTGGGCAGCTATGGAGGCCCTaGGCTGCAGGCAAGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: DTFSTEILQRGFHAVHTGQLWRP*AAGKEP Trigger: TGGCTCCTTGCCTGCAGCCCAGGGCCTCCATAGCTG...CCCAGTGTGGACAGCATGGAAACCCCGCTGTAGTATCTCAGTACTAAATGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR CCA 90 bp | CACACACAGCAGCTTCATGTGGTTCTTTTGAGGGTTACATGGGGTAACATGTTCCTGACCCACCAGCCTTaGGTCTGGGCCATCCACGGT | + |
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Preference number: 2 (lower is better) Translates to: HTQQLHVVLLRVTWGNMFLTHQP*VWAIHG Trigger: ACCGTGGATGGCCCAGACCCAAGGCTGGTGGGTCAG...GAACATGTTACCCCATGTAACCCTCAAAAGAACCACATGAAGCTGCTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR CCA 90 bp | GATGCGTCTCTGAACCTGTGTGTTGAGGAAACTGACGAGGATTCACTCAAGACTGCCTTTAGACAGCTATaGAGGCCCTGGGCTGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: DASLNLCVEETDEDSLKTAFRQL*RPWAAG Trigger: GCCTGCAGCCCAGGGCCTCCATAGCTGTCTAAAGGC...AGTCTTGAGTGAATCCTCGTCAGTTTCCTCAACACACAGGTTCAGAGACGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR TCA 90 bp | CAAACGCACACTCTTTTGTTTGGTCTTAGCTTGCTCCTTTGTCTTCTGTTCTTCAAGGGTGCCTCCAGGTaGCTCCACGCTCTGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QTHTLLFGLSLLLCLLFFKGASR*LHALWR Trigger: CCTCCACAGAGCGTGGAGTCACCTGGAGGCACCCTT...GAAGAACAGAAGACAAAGGAGCAAGCTAAGACCAAACAAAAGAGTGTGCGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR TCA 90 bp | GATACATTTAGTACTGAGATACTACAGCGGGGTTTCCATGCTGTCCACACTGGGTCTAAAAGGTCTCACTaGGGCAGGAGCACCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: DTFSTEILQRGFHAVHTGSKRSH*GRSTLP Trigger: TGGGAGGGTGCTCCTGCCTCAGTGAGACCTTTTAGA...CCCAGTGTGGACAGCATGGAAACCCCGCTGTAGTATCTCAGTACTAAATGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR GCA 90 bp | GAAAAGTCATCTTGGGAGCACCGTAGTTGGAGGAGAAGGACACATTCCCTAGCCAAGGTGCGTTTCCGGTaGTTCCTTCTGCAAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: EKSSWEHRSWRRRTHSLAKVRFR*FLLQML Trigger: CAGCATTTGCAGAAGGAAGCACCGGAAACGCACCTT...GGCTAGGGAATGTGTCCTTCTCCTCCAACTACGGTGCTCCCAAGATGACTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR GCA 90 bp | CACACACAGCAGCTTCATGTGGTTCTTTTGAGGGTTACATGGGGTAACATGTTCGAGTGGAGGGCAAGGTaGGTTTCCGGTGCTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: HTQQLHVVLLRVTWGNMFEWRAR*VSGASF Trigger: GAAGGAAGCACCGGAAACGCACCTTGCCCTCCACTC...GAACATGTTACCCCATGTAACCCTCAAAAGAACCACATGAAGCTGCTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR GCA 90 bp | GAAAAGTCATCTTGGGAGCACCGTAGTTGGAGGAGAAGGACACATTCCCTAGCCTGCCTTCTTTCTGGCTaGATCTCTGGTGCATCTTAC | + |
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Preference number: 2 (lower is better) Translates to: EKSSWEHRSWRRRTHSLACLLSG*ISGASY Trigger: GTAAGATGCACCAGAGATGCAGCCAGAAAGAAGGCA...GGCTAGGGAATGTGTCCTTCTCCTCCAACTACGGTGCTCCCAAGATGACTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR CCA 90 bp | GATGCGTCTCTGAACCTGTGTGTTGAGGAAACTGACGAGGATTCACTCAAGACTGGTGCACAGCAAAAGTaGCTGGAAGATCACCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: DASLNLCVEETDEDSLKTGAQQK*LEDHPV Trigger: CACTGGGTGATCTTCCAGCCACTTTTGCTGTGCACC...AGTCTTGAGTGAATCCTCGTCAGTTTCCTCAACACACAGGTTCAGAGACGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR TCA 90 bp | TGGCCATTGGGCTGGAAGAACAGAAGCGGAAAGATACATTTAGTACTGAGATACGCCCTTTGGCGGCAGTaGAGAAAGGGACTAACAGTG | + |
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Preference number: 2 (lower is better) Translates to: WPLGWKNRSGKIHLVLRYALWRQ*RKGLTV Trigger: CACTGTTAGTCCCTTTCTTCACTGCCGCCAAAGGGC...GTATCTCAGTACTAAATGTATCTTTCCGCTTCTGTTCTTCCAGCCCAATGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CAA 90 bp | GAGCACCGTAGTTGGAGGAGAAGGACACATTCCCTAGCCTTTATTTaGGAGATTTCTAGGAACCACCTTTCAAATCTGTGCCTGGGATGG | + |
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Preference number: 2 (lower is better) Translates to: EHRSWRRRTHSLAFI*EISRNHLSNLCLGW Trigger: CCATCCCAGGCACAGATTTGAAAGGTGGTTCCTAGAAATCTCCAAAATAAAGGCTAGGGAATGTGTCCTTCTCCTCCAACTACGGTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR CCA 90 bp | GATACATTTAGTACTGAGATACTACAGCGGGGTTTCCATGCTGTCCACACTGGGTTGATGCCTTCTTTCTaGCTGCATCTCTGGTGCATC | + |
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Preference number: 2 (lower is better) Translates to: DTFSTEILQRGFHAVHTGLMPSF*LHLWCI Trigger: GATGCACCAGAGATGCAGCCAGAAAGAAGGCATCAA...CCCAGTGTGGACAGCATGGAAACCCCGCTGTAGTATCTCAGTACTAAATGTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR CCA 90 bp | TACTGTCTGTCTAGACCCTCTACTAAAACATATACATTCCTCAAAGAGTACCGTAGGAGCCACACGAACTaGTCTCTCCCAGGGCTGACC | + |
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Preference number: 2 (lower is better) Translates to: YCLSRPSTKTYTFLKEYRRSHTN*SLPGLT Trigger: GGTCAGCCCTGGGAGAGACCAGTTCGTGTGGCTCCT...ACGGTACTCTTTGAGGAATGTATATGTTTTAGTAGAGGGTCTAGACAGACAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGTCATCTTGGGAGCACCGTAGTTGGAGGAGAAGGACACATTCCCTAGCCTTTCAGAAAAAGCGCTaGGAACATCCCAGCTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: EKSSWEHRSWRRRTHSLAFQKKR*EHPSFN Trigger: ATTAAAGCTGGGATGTTCTCAGCGCTTTTTCTGAAA...GGCTAGGGAATGTGTCCTTCTCCTCCAACTACGGTGCTCCCAAGATGACTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR GCA 90 bp | GAAAAGTCATCTTGGGAGCACCGTAGTTGGAGGAGAAGGACACATTCCCTAGCCGTAATAAAAAGGTCCTaGTGTTTAGAGGTCCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: EKSSWEHRSWRRRTHSLAVIKRS*CLEVQG Trigger: ACCTTGGACCTCTAAACAGCAGGACCTTTTTATTAC...GGCTAGGGAATGTGTCCTTCTCCTCCAACTACGGTGCTCCCAAGATGACTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR GCA 90 bp | GATACATTTAGTACTGAGATACTACAGCGGGGTTTCCATGCTGTCCACACTGGGGAGACAAGCTGGATTTaGTTGCCATGTTTTCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: DTFSTEILQRGFHAVHTGETSWI*LPCFPL Trigger: TAGGGGAAAACATGGCAAGCAAATCCAGCTTGTCTC...CCCAGTGTGGACAGCATGGAAACCCCGCTGTAGTATCTCAGTACTAAATGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR-3UTR CCA 90 bp | TTCCGGTGCTTCCTTCTGCAAATGCTGACCTATTCCAAAGCAACCATGTTTATGCTGGAAAGGGACTCATaGCAGCTGTCTGGGTTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: FRCFLLQMLTYSKATMFMLERDS*QLSGFF Trigger: GAAAAACCCAGACAGCTGCCATGAGTCCCTTTCCAG...CATAAACATGGTTGCTTTGGAATAGGTCAGCATTTGCAGAAGGAAGCACCGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CAA 90 bp | CTCCAGCGGGGAGGTCCGGCTTGCTTTTCCCTGCGGTGCTTATGTTaGATGATGGATCTTATTTATAAACTATCAACAAACAGAGTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LQRGGPACFSLRCLC*MMDLIYKLSTNRVA Trigger: AGCTACTCTGTTTGTTGATAGTTTATAAATAAGATCCATCATCAAACATAAGCACCGCAGGGAAAAGCAAGCCGGACCTCCCCGCTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR TCA 90 bp | CACACACAGCAGCTTCATGTGGTTCTTTTGAGGGTTACATGGGGTAACATGTTCTCCTTCTGCAAATGCTaGCCTATTCCAAAGCAACCA | + |
|
Preference number: 2 (lower is better) Translates to: HTQQLHVVLLRVTWGNMFSFCKC*PIPKQP Trigger: TGGTTGCTTTGGAATAGGTCAGCATTTGCAGAAGGA...GAACATGTTACCCCATGTAACCCTCAAAAGAACCACATGAAGCTGCTGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCCGGTGCTTCCTTCTGCAAATGCTGACCTATTCCAAAGCAACCATGTTTATGTCTCTCCAGACTTGCTaGCTCACCCATGACAAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: FRCFLLQMLTYSKATMFMSLQTC*LTHDKL Trigger: TAACTTGTCATGGGTGAGGCAGCAAGTCTGGAGAGA...CATAAACATGGTTGCTTTGGAATAGGTCAGCATTTGCAGAAGGAAGCACCGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR TCA 90 bp | ACACATTCCCTAGCCTTTATTTTGGAGATTTCTAGGAACCACCTTTCAAATCTGTCAAGTGAGTGCTTCTaGCACAAAGGGTGCCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: THSLAFILEISRNHLSNLSSECF*HKGCLQ Trigger: CTGGAGGCACCCTTTGTGTCAGAAGCACTCACTTGA...CAGATTTGAAAGGTGGTTCCTAGAAATCTCCAAAATAAAGGCTAGGGAATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR GCA 90 bp | ATATACATTCCTCAAAGAGTACCGTTGAGTGTCTGGGTTCAGAATCTTGGAGCAAATGTCTCATGCTCCTaGAGCTTATCCTTGAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: IYIPQRVPLSVWVQNLGANVSCS*SLSLSP Trigger: TGGGCTCAAGGATAAGCTGCAGGAGCATGAGACATT...TGCTCCAAGATTCTGAACCCAGACACTCAACGGTACTCTTTGAGGAATGTATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR GCA 90 bp | CAAACGCACACTCTTTTGTTTGGTCTTAGCTTGCTCCTTTGTCTTCTGTTCTTCCACCTTTCAAATCTGTaGCTGGGATGGCTTACCCAT | + |
|
Preference number: 2 (lower is better) Translates to: QTHTLLFGLSLLLCLLFFHLSNL*LGWLTH Trigger: ATGGGTAAGCCATCCCAGGCACAGATTTGAAAGGTG...GAAGAACAGAAGACAAAGGAGCAAGCTAAGACCAAACAAAAGAGTGTGCGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGCCATTGGGCTGGAAGAACAGAAGCGGAAAGATACATTTAGTACTGAGATACGTGTGGGACCAGTTTTaGTGTTTGCTATCGGTTACA | + |
|
Preference number: 2 (lower is better) Translates to: WPLGWKNRSGKIHLVLRYVWDQF*CLLSVT Trigger: TGTAACCGATAGCAAACAGCAAAACTGGTCCCACAC...GTATCTCAGTACTAAATGTATCTTTCCGCTTCTGTTCTTCCAGCCCAATGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR CCA 90 bp | CACACACAGCAGCTTCATGTGGTTCTTTTGAGGGTTACATGGGGTAACATGTTCAACAAACAGAGTAGCTaGCTCTCTGTCTGCTACAAA | + |
|
Preference number: 2 (lower is better) Translates to: HTQQLHVVLLRVTWGNMFNKQSS*LSVCYK Trigger: TTTGTAGCAGACAGAGAGCCAGCTACTCTGTTTGTT...GAACATGTTACCCCATGTAACCCTCAAAAGAACCACATGAAGCTGCTGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR CCA 90 bp | ACACATTCCCTAGCCTTTATTTTGGAGATTTCTAGGAACCACCTTTCAAATCTGGGTAAGGGAATGAGCTaGAGAAAGGCCCACACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: THSLAFILEISRNHLSNLGKGMS*RKAHTV Trigger: GACTGTGTGGGCCTTTCTCCAGCTCATTCCCTTACC...CAGATTTGAAAGGTGGTTCCTAGAAATCTCCAAAATAAAGGCTAGGGAATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGTAGTGTGTTTTTAGATGAATTAATTCTGGTAGAGAAAAGATTGCTGACGCCTGCAGCTTATCCTTaGGCCCAAGGCTCCTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KGSVFLDELILVEKRLLTPAAYP*AQGSWK Trigger: TTTCCAGGAGCCTTGGGCTCAAGGATAAGCTGCAGG...CGTCAGCAATCTTTTCTCTACCAGAATTAATTCATCTAAAAACACACTACCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAAATCTGTGCCTGGGATGGCTTACCCATAGTATAGTGTACACTAGCAACAGCGAAACAGACCGAAGATaGAAGATGTTTTTGGTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SNLCLGWLTHSIVYTSNSETDRR*KMFLVV Trigger: GACTACCAAAAACATCTTCCATCTTCGGTCTGTTTC...GCTGTTGCTAGTGTACACTATACTATGGGTAAGCCATCCCAGGCACAGATTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCATTGGGCTGGAAGAACAGAAGCGGAAAGATACATTTAGTACTGAGATACTTTCAAATCTGTGCCTaGGATGGCTTACCCATAGTA | + |
|
Preference number: 2 (lower is better) Translates to: WPLGWKNRSGKIHLVLRYFQICA*DGLPIV Trigger: TACTATGGGTAAGCCATCCCAGGCACAGATTTGAAA...GTATCTCAGTACTAAATGTATCTTTCCGCTTCTGTTCTTCCAGCCCAATGGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CAA 90 bp | AAGGGTAGTGTGTTTTTAGATGAATTAATTCTGGTAGAGAAAAGATaGCTGACGGCCAGCCAGGACAATCTGCCTGAAACTAAGCGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: KGSVFLDELILVEKR*LTASQDNLPETKRS Trigger: TGAACGCTTAGTTTCAGGCAGATTGTCCTGGCTGGCCGTCAGCAATCTTTTCTCTACCAGAATTAATTCATCTAAAAACACACTACCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGCCATTGGGCTGGAAGAACAGAAGCGGAAAGATACATTTAGTACTGAGATACTGTTTGGTCTTAGCTTaGTCCTTTGTCTTCTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: WPLGWKNRSGKIHLVLRYCLVLA*SFVFCS Trigger: AGAACAGAAGACAAAGGAGCAAGCTAAGACCAAACA...GTATCTCAGTACTAAATGTATCTTTCCGCTTCTGTTCTTCCAGCCCAATGGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR CCA 90 bp | ACACATTCCCTAGCCTTTATTTTGGAGATTTCTAGGAACCACCTTTCAAATCTGACACAAACCTTTCCTTaGCAACTCACAGCGTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: THSLAFILEISRNHLSNLTQTFP*QLTASS Trigger: AGATGACGCTGTGAGTTGCCAAGGAAAGGTTTGTGT...CAGATTTGAAAGGTGGTTCCTAGAAATCTCCAAAATAAAGGCTAGGGAATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CAA 90 bp | CTCAAGACTAAAGAAGAGAGCAATAGCACTCAAACGCACACTCTTTaGTTTGGTCTTAGCTTGCTCCTTTGTCTTCTGTTCTTCACTTAT | + |
|
Preference number: 2 (lower is better) Translates to: LKTKEESNSTQTHTL*FGLSLLLCLLFFTY Trigger: ATAAGTGAAGAACAGAAGACAAAGGAGCAAGCTAAGACCAAACAAAAGAGTGTGCGTTTGAGTGCTATTGCTCTCTTCTTTAGTCTTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR GCA 90 bp | ACACATTCCCTAGCCTTTATTTTGGAGATTTCTAGGAACCACCTTTCAAATCTGCATCCCAGCTTTAATTaGAAAGCTAAAGGGAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: THSLAFILEISRNHLSNLHPSFN*KAKGKG Trigger: GCCTTTCCCTTTAGCTTTGCAATTAAAGCTGGGATG...CAGATTTGAAAGGTGGTTCCTAGAAATCTCCAAAATAAAGGCTAGGGAATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | GGAGGCCCTGGGCTGCAGGCAAGGAGCCACACGAACTaGTCTCTCCCAGGGCTGACCCACCAGCCTTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GGPGLQARSHTN*SLPGLTHQPWV Trigger: GACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCAGTTCGTGTGGCTCCTTGCCTGCAGCCCAGGGCCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR TCA 72 bp | CAGGCCGGCCCAGCTGGTGTGCCCGAGGTAAGGGAATaGGCTGGAGAAAGGCCCACACAGTCCCAGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QAGPAGVPEVRE*AGERPTQSQEE Trigger: CTCTTCCTGGGACTGTGTGGGCCTTTCTCCAGCTCATTCCCTTACCTCGGGCACACCAGCTGGGCCGGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR TCA 72 bp | AGGCAAGGAGCCACACGAACTGGTCTCTCCCAGGGCTaGCCCACCAGCCTTGGGTCTGGGCCATCCACGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RQGATRTGLSQG*PTSLGSGPSTV Trigger: AACCGTGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCAGTTCGTGTGGCTCCTTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | TGGTCTCTCCCAGGGCTGACCCACCAGCCTTGGGTCTaGGCCATCCACGGTTGGTTGCTAATGGCCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WSLPGLTHQPWV*AIHGWLLMAWS Trigger: GCTCCAGGCCATTAGCAACCAACCGTGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | AAGCGTTCACTTGGAGGCTGGCCAGGCCGGCCCAGCTaGTGTGCCCGAGGTAAGGGAATGAGCTGGAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KRSLGGWPGRPS*CARGKGMSWRK Trigger: CTTTCTCCAGCTCATTCCCTTACCTCGGGCACACCAGCTGGGCCGGCCTGGCCAGCCTCCAAGTGAACGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | ACGAACTGGTCTCTCCCAGGGCTGACCCACCAGCCTTaGGTCTGGGCCATCCACGGTTGGTTGCTAATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TNWSLPGLTHQP*VWAIHGWLLMA Trigger: GGCCATTAGCAACCAACCGTGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCAGTTCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | CGGCCCAGCTGGTGTGCCCGAGGTAAGGGAATGAGCTaGAGAAAGGCCCACACAGTCCCAGGAAGAGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: RPSWCARGKGMS*RKAHTVPGRDK Trigger: CTTGTCTCTTCCTGGGACTGTGTGGGCCTTTCTCCAGCTCATTCCCTTACCTCGGGCACACCAGCTGGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | GACAATCTGCCTGAAACTAAGCGTTCACTTGGAGGCTaGCCAGGCCGGCCCAGCTGGTGTGCCCGAGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: DNLPETKRSLGG*PGRPSWCARGK Trigger: CTTACCTCGGGCACACCAGCTGGGCCGGCCTGGCCAGCCTCCAAGTGAACGCTTAGTTTCAGGCAGATTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | AGAAGACCTGTGGCTTCTGACGCCTTTAGACAGCTATaGAGGCCCTGGGCTGCAGGCAAGGAGCCACACGAA | + |
|
Preference number: 3 (lower is better) Translates to: RRPVASDAFRQL*RPWAAGKEPHE Trigger: TTCGTGTGGCTCCTTGCCTGCAGCCCAGGGCCTCCATAGCTGTCTAAAGGCGTCAGAAGCCACAGGTCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR GCA 72 bp | TCCCTCCCACCTCCCTGGGACCAGCTTACTGCACATTaGCAAGAAGTCACTGAAAGTGGCTTCCACTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLPPPWDQLTAH*QEVTESGFHSS Trigger: GCTGGAGTGGAAGCCACTTTCAGTGACTTCTTGGCAATGTGCAGTAAGCTGGTCCCAGGGAGGTGGGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | CTGACCCACCAGCCTTGGGTCTGGGCCATCCACGGTTaGTTGCTAATGGCCTGGAGCTGCATATGTAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: LTHQPWVWAIHG*LLMAWSCICNS Trigger: GCTATTACATATGCAGCTCCAGGCCATTAGCAACCAACCGTGGATGGCCCAGACCCAAGGCTGGTGGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR TCA 72 bp | CAAGTGAGTGCTTCTGACACAAAGGGTGCCTCCAGGTaGCTCCACGCTCTGTGGAGGAGGCAATGTCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: QVSASDTKGASR*LHALWRRQCLM Trigger: CATGAGACATTGCCTCCTCCACAGAGCGTGGAGTCACCTGGAGGCACCCTTTGTGTCAGAAGCACTCACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | GGAGAAAGGCCCACACAGTCCCAGGAAGAGACAAGCTaGATTTGCTTGCCATGTTTTCCCCTAGCACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GERPTQSQEETS*ICLPCFPLAPG Trigger: GCCAGGTGCTAGGGGAAAACATGGCAAGCAAATCCAGCTTGTCTCTTCCTGGGACTGTGTGGGCCTTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR TCA 72 bp | ACCACCATCTCCTGTCCAGAATCAAGTGAGTGCTTCTaGCACAAAGGGTGCCTCCAGGTGACTCCACGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TTISCPESSECF*HKGCLQVTPRS Trigger: AGAGCGTGGAGTCACCTGGAGGCACCCTTTGTGTCAGAAGCACTCACTTGATTCTGGACAGGAGATGGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | CACCTGGCCAGTGACAGAAAGGAAGTTGCAGACATGTaGCCCCACTGGGAAGGCTTTAAGGTGTCCAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: HLASDRKEVADM*PHWEGFKVSKS Trigger: TGACTTGGACACCTTAAAGCCTTCCCAGTGGGGCCACATGTCTGCAACTTCCTTTCTGTCACTGGCCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | TTGATGCTTCGGGTATGGGTGCACAGCAAAAGTGGCTaGAAGATCACCCAGTGTGGGGGAAGGGTAGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LMLRVWVHSKSG*KITQCGGRVVC Trigger: ACACACTACCCTTCCCCCACACTGGGTGATCTTCCAGCCACTTTTGCTGTGCACCCATACCCGAAGCATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | TTAGTTGTGCTTCACCAGCCCTTGATAGAGGAAGCCTaGGCTCAGAATCCCAGCAAAGACCGGGTGACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LVVLHQPLIEEA*AQNPSKDRVTG Trigger: TCCAGTCACCCGGTCTTTGCTGGGATTCTGAGCCCAGGCTTCCTCTATCAAGGGCTGGTGAAGCACAACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | TGGGTCTGGGCCATCCACGGTTGGTTGCTAATGGCCTaGAGCTGCATATGTAATAGCTCCCATGGCACACAA | + |
|
Preference number: 3 (lower is better) Translates to: WVWAIHGWLLMA*SCICNSSHGTQ Trigger: TTGTGTGCCATGGGAGCTATTACATATGCAGCTCCAGGCCATTAGCAACCAACCGTGGATGGCCCAGACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | ACTCCACATGACCATCAGAAGCCAGGAGAAGACCTGTaGCTTCTGACGCCTTTAGACAGCTATGGAGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TPHDHQKPGEDL*LLTPLDSYGGP Trigger: AGGGCCTCCATAGCTGTCTAAAGGCGTCAGAAGCCACAGGTCTTCTCCTGGCTTCTGATGGTCATGTGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | TTATCCTTGAGCCCAAGGCTCCTGGAAAGGGACTCATaGCAGCTGTCTGGGTTTTTCTCTCCAGACTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLSPRLLERDS*QLSGFFSPDLL Trigger: CAGCAAGTCTGGAGAGAAAAACCCAGACAGCTGCCATGAGTCCCTTTCCAGGAGCCTTGGGCTCAAGGATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR CAA 90 bp | GATGCGTCTCTGAACCTGTGTGTTGAGGAAACTGACGAGGATTCACTCAAGACTCTGGTAGAGAAAAGATaGCTGACGGCCAGCCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: DASLNLCVEETDEDSLKTLVEKR*LTASQD Trigger: GTCCTGGCTGGCCGTCAGCAATCTTTTCTCTACCAG...AGTCTTGAGTGAATCCTCGTCAGTTTCCTCAACACACAGGTTCAGAGACGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR TCA 72 bp | CTGGGACCAGCTTACTGCACATTGCCAAGAAGTCACTaGAAGTGGCTTCCACTCCAGCCTTTCCCTATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LGPAYCTLPRSH*KWLPLQPFPMD Trigger: ATCCATAGGGAAAGGCTGGAGTGGAAGCCACTTTCAGTGACTTCTTGGCAATGTGCAGTAAGCTGGTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR GCA 72 bp | TGGGCCATCCACGGTTGGTTGCTAATGGCCTGGAGCTaGATATGTAATAGCTCCCATGGCACACAAACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: WAIHGWLLMAWS*ICNSSHGTQTF Trigger: AAAGGTTTGTGTGCCATGGGAGCTATTACATATGCAGCTCCAGGCCATTAGCAACCAACCGTGGATGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | GGGATACAGCGTGTGTTAGAGAGTAAAGAAAGGAGTTaGGAGGCCCAGAGTCTAAGCATCAGGGCTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GIQRVLESKERS*EAQSLSIRASS Trigger: AGAGCTAGCCCTGATGCTTAGACTCTGGGCCTCCCAACTCCTTTCTTTACTCTCTAACACACGCTGTATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | TTAAGGTGTCCAAGTCAGAACAGAAAGAAGGCAGCGTaGAGATCCCCACTTTCTTCCACTGCAGGAAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRCPSQNRKKAA*RSPLSSTAGSP Trigger: AGGGCTTCCTGCAGTGGAAGAAAGTGGGGATCTCCACGCTGCCTTCTTTCTGTTCTGACTTGGACACCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | AAGCTGGATTTGCTTGCCATGTTTTCCCCTAGCACCTaGCCAGTGACAGAAAGGAAGTTGCAGACATGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KLDLLAMFSPST*PVTERKLQTCG Trigger: GCCACATGTCTGCAACTTCCTTTCTGTCACTGGCCAGGTGCTAGGGGAAAACATGGCAAGCAAATCCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR CAA 90 bp | ATATACATTCCTCAAAGAGTACCGTTGAGTGTCTGGGTTCAGAATCTTGGAGCAAAACTAAGCGTTCACTaGGAGGCTGGCCAGGCCGGC | + |
|
Preference number: 3 (lower is better) Translates to: IYIPQRVPLSVWVQNLGAKLSVH*EAGQAG Trigger: GCCGGCCTGGCCAGCCTCCAAGTGAACGCTTAGTTT...TGCTCCAAGATTCTGAACCCAGACACTCAACGGTACTCTTTGAGGAATGTATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR GCA 72 bp | CATGGCAGCTGTCTGGGTTTTTCTCTCCAGACTTGCTaGCTCACCCATGACAAGTTAGGCTCTATTCGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: HGSCLGFSLQTC*LTHDKLGSIRN Trigger: GTTTCGAATAGAGCCTAACTTGTCATGGGTGAGGCAGCAAGTCTGGAGAGAAAAACCCAGACAGCTGCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | ACACAGCAGCTTCATGTGGTTCTTTTGAGGGTTACATaGGGTAACATGTTCCGAGTATGCATCCCCCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TQQLHVVLLRVT*GNMFRVCIPLG Trigger: ACCCAGGGGGATGCATACTCGGAACATGTTACCCCATGTAACCCTCAAAAGAACCACATGAAGCTGCTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR TCA 72 bp | CTGATGCTTGACCTTGAGAAGGTCATGATGCGTCTCTaGACCTGTGTGTTGAGGAAACTGACGAGGATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LMLDLEKVMMRL*TCVLRKLTRIH Trigger: GTGAATCCTCGTCAGTTTCCTCAACACACAGGTTCAGAGACGCATCATGACCTTCTCAAGGTCAAGCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR GCA 72 bp | GTTAGTTTGATGCCTTCTTTCTGGCTGCATCTCTGGTaGATCTTACTTATCCTGCCTCAGCAGAGGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VSLMPSFWLHLW*ILLILPQQRQS Trigger: GCTTTGCCTCTGCTGAGGCAGGATAAGTAAGATGCACCAGAGATGCAGCCAGAAAGAAGGCATCAAACTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR GCA 72 bp | CAAACCTTTCCTTGGCAACTCACAGCGTCATCTTTGTaGTCCTCTGTGGGCAAAGTTAGTTGTGCTTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: QTFPWQLTASSL*SSVGKVSCASP Trigger: TGGTGAAGCACAACTAACTTTGCCCACAGAGGAGCACAAAGATGACGCTGTGAGTTGCCAAGGAAAGGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCATTGGGCTGGAAGAACAGAAGCGGAAAGATACATTTAGTACTGAGATACCTCACAGCGTCATCTTaGTGCTCCTCTGTGGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: WPLGWKNRSGKIHLVLRYLTASS*CSSVGK Trigger: TTTGCCCACAGAGGAGCACAAAGATGACGCTGTGAG...GTATCTCAGTACTAAATGTATCTTTCCGCTTCTGTTCTTCCAGCCCAATGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR CAA 90 bp | GATGCGTCTCTGAACCTGTGTGTTGAGGAAACTGACGAGGATTCACTCAAGACTCGCACACTCTTTTGTTaGGTCTTAGCTTGCTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: DASLNLCVEETDEDSLKTRTLFC*VLACSF Trigger: AAAGGAGCAAGCTAAGACCAAACAAAAGAGTGTGCG...AGTCTTGAGTGAATCCTCGTCAGTTTCCTCAACACACAGGTTCAGAGACGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR TCA 72 bp | TCTGGGTTTTTCTCTCCAGACTTGCTGCCTCACCCATaGCAAGTTAGGCTCTATTCGAAACAGACCGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SGFFSPDLLPHP*QVRLYSKQTED Trigger: ATCTTCGGTCTGTTTCGAATAGAGCCTAACTTGTCATGGGTGAGGCAGCAAGTCTGGAGAGAAAAACCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR TCA 72 bp | TTTAATTGCAAAGCTAAAGGGAAAGGCATAGCTCAGTaGGGAGGCCCGGAGAACCTGGAAATAAGAAGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: FNCKAKGKGIAQ*GGPENLEIRSE Trigger: CTCGCTTCTTATTTCCAGGTTCTCCGGGCCTCCTCACTGAGCTATGCCTTTCCCTTTAGCTTTGCAATTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR TCA 72 bp | GCAAGGTGCGTTTCCGGTGCTTCCTTCTGCAAATGCTaGCCTATTCCAAAGCAACCATGTTTATGTACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ARCVSGASFCKC*PIPKQPCLCTE Trigger: CTCAGTACATAAACATGGTTGCTTTGGAATAGGTCAGCATTTGCAGAAGGAAGCACCGGAAACGCACCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR GCA 72 bp | CTTTCTGGCTGCATCTCTGGTGCATCTTACTTATCCTaGCTCAGCAGAGGCAAAGCTCTTTTCAGAAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSGCISGASYLS*LSRGKALFRKS Trigger: GCTTTTTCTGAAAAGAGCTTTGCCTCTGCTGAGGCAGGATAAGTAAGATGCACCAGAGATGCAGCCAGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR GCA 72 bp | CTCCAGCGGGGAGGTCCGGCTTGCTTTTCCCTGCGGTaGTTATGTTTGATGATGGATCTTATTTATAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: LQRGGPACFSLR*LCLMMDLIYKL Trigger: TAGTTTATAAATAAGATCCATCATCAAACATAAGCACCGCAGGGAAAAGCAAGCCGGACCTCCCCGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR GCA 72 bp | GTTAAAAGCCCAGAGTGTGGGACCAGTTTTGCTGTTTaGTATCGGTTACATAGGGACAACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: VKSPECGTSFAV*YRLHRDNTHTH Trigger: GTGTGTGTGTGTGTTGTCCCTATGTAACCGATAGCAAACAGCAAAACTGGTCCCACACTCTGGGCTTTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | GAAGTTAGTTTGATGCCTTCTTTCTGGCTGCATCTCTaGTGCATCTTACTTATCCTGCCTCAGCAGAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: EVSLMPSFWLHL*CILLILPQQRQ Trigger: TTGCCTCTGCTGAGGCAGGATAAGTAAGATGCACCAGAGATGCAGCCAGAAAGAAGGCATCAAACTAACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | TCCCAGAGGCTAGAAGTTAGTTTGATGCCTTCTTTCTaGCTGCATCTCTGGTGCATCTTACTTATCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SQRLEVSLMPSF*LHLWCILLILP Trigger: AGGCAGGATAAGTAAGATGCACCAGAGATGCAGCCAGAAAGAAGGCATCAAACTAACTTCTAGCCTCTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | ATATGTAATAGCTCCCATGGCACACAAACCTTTCCTTaGCAACTCACAGCGTCATCTTTGTGCTCCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ICNSSHGTQTFP*QLTASSLCSSV Trigger: CACAGAGGAGCACAAAGATGACGCTGTGAGTTGCCAAGGAAAGGTTTGTGTGCCATGGGAGCTATTACATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | GTGTTTTCATCTTTCTGTAAATTGATGCTTCGGGTATaGGTGCACAGCAAAAGTGGCTGGAAGATCACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VFSSFCKLMLRV*VHSKSGWKITQ Trigger: CTGGGTGATCTTCCAGCCACTTTTGCTGTGCACCCATACCCGAAGCATCAATTTACAGAAAGATGAAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | GTTTGGAGAGAAAAGTCATCTTGGGAGCACCGTAGTTaGAGGAGAAGGACACATTCCCTAGCCTTTATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VWREKSSWEHRS*RRRTHSLAFIL Trigger: CAAAATAAAGGCTAGGGAATGTGTCCTTCTCCTCCAACTACGGTGCTCCCAAGATGACTTTTCTCTCCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | AACATATACATTCCTCAAAGAGTACCGTTGAGTGTCTaGGTTCAGAATCTTGGAGCAAGAGACCTGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: NIYIPQRVPLSV*VQNLGARDLPE Trigger: CTCAGGCAGGTCTCTTGCTCCAAGATTCTGAACCCAGACACTCAACGGTACTCTTTGAGGAATGTATATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | ATTTCTAGGAACCACCTTTCAAATCTGTGCCTGGGATaGCTTACCCATAGTATAGTGTACACTAGCAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: ISRNHLSNLCLG*LTHSIVYTSNS Trigger: GCTGTTGCTAGTGTACACTATACTATGGGTAAGCCATCCCAGGCACAGATTTGAAAGGTGGTTCCTAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR TCA 72 bp | ACAGTGGTGGAAAATAACTACTCTGGCAGACTCTTCTaGATGCTCTACAAAACGTTACCAACAACACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TVVENNYSGRLF*MLYKTLPTTQD Trigger: GTCCTGTGTTGTTGGTAACGTTTTGTAGAGCATTCAGAAGAGTCTGCCAGAGTAGTTATTTTCCACCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR CAA 90 bp | ACACATTCCCTAGCCTTTATTTTGGAGATTTCTAGGAACCACCTTTCAAATCTGAGAGACAAGCTGGATTaGCTTGCCATGTTTTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: THSLAFILEISRNHLSNLRDKLD*LAMFSP Trigger: AGGGGAAAACATGGCAAGCAAATCCAGCTTGTCTCT...CAGATTTGAAAGGTGGTTCCTAGAAATCTCCAAAATAAAGGCTAGGGAATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR TCA 72 bp | TCTACTAAAACATATACATTCCTCAAAGAGTACCGTTaGGTGTCTGGGTTCAGAATCTTGGAGCAAGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: STKTYTFLKEYR*VSGFRILEQET Trigger: GGTCTCTTGCTCCAAGATTCTGAACCCAGACACTCAACGGTACTCTTTGAGGAATGTATATGTTTTAGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR GCA 72 bp | TGGTGGAAAATAACTACTCTGGCAGACTCTTCTGAATaGTCTACAAAACGTTACCAACAACACAGGACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: WWKITTLADSSE*STKRYQQHRTD Trigger: ATCTGTCCTGTGTTGTTGGTAACGTTTTGTAGAGCATTCAGAAGAGTCTGCCAGAGTAGTTATTTTCCACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR-3UTR CAA 90 bp | TACTGTCTGTCTAGACCCTCTACTAAAACATATACATTCCTCAAAGAGTACCGTAACACTAAGTCTAAGTaGGTGGAGCTGAGTTTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: YCLSRPSTKTYTFLKEYRNTKSK*VELSFS Trigger: ACTAAAACTCAGCTCCACCAACTTAGACTTAGTGTT...ACGGTACTCTTTGAGGAATGTATATGTTTTAGTAGAGGGTCTAGACAGACAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CCA 72 bp | AAATGTAACAATCTGAATACAAGTTGGCCATTGGGCTaGAAGAACAGAAGCGGAAAGATACATTTAGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: KCNNLNTSWPLG*KNRSGKIHLVL Trigger: CAGTACTAAATGTATCTTTCCGCTTCTGTTCTTCCAGCCCAATGGCCAACTTGTATTCAGATTGTTACATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR TCA 90 bp | CACGAACTGGTCTCTCCCAGGGCTGACCCACCAGCCTTGGGTCTGGGCCATCCAGCTCCAGGCGATAAGTaGAGCAGTCGGCCTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HELVSPRADPPALGLGHPAPGDK*SSRPEW Trigger: CCACTCAGGCCGACTGCTTCACTTATCGCCTGGAGC...TGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCAGTTCGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CAA 72 bp | CACGAACTGGTCTCTCCCAGGGCTGACCCACCAGCCTaGGGTCTGGGCCATCCACGGTTGGTTGCTAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: HELVSPRADPPA*GLGHPRLVANG Trigger: GCCATTAGCAACCAACCGTGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCAGTTCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR GCA 90 bp | CACGAACTGGTCTCTCCCAGGGCTGACCCACCAGCCTTGGGTCTGGGCCATCCAGAAGCTACCTTGCTCTaGGGAGTTCTGAGTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: HELVSPRADPPALGLGHPEATLL*GVLSDP Trigger: GGGATCACTCAGAACTCCGCAGAGCAAGGTAGCTTC...TGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCAGTTCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR CCA 90 bp | ACAATCTGCCTGAAACTAAGCGTTCACTTGGAGGCTGGCCAGGCCGGCCCAGCTAGGTGGCCTTCCCACTaGCAGGAGAAGAGCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TICLKLSVHLEAGQAGPARWPSH*QEKSGH Trigger: ATGCCCGCTCTTCTCCTGCCAGTGGGAAGGCCACCT...AGCTGGGCCGGCCTGGCCAGCCTCCAAGTGAACGCTTAGTTTCAGGCAGATTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR CCA 90 bp | CTAAGCGTTCACTTGGAGGCTGGCCAGGCCGGCCCAGCTGGTGTGCCCGAGGTACATTTGAGACGCCTGTaGTTTCTGTTGAGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSVHLEAGQAGPAGVPEVHLRRL*FLLSSR Trigger: CCTGGAGCTCAACAGAAACCACAGGCGTCTCAAATG...TACCTCGGGCACACCAGCTGGGCCGGCCTGGCCAGCCTCCAAGTGAACGCTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR TCA 90 bp | ACGGCCAGCCAGGACAATCTGCCTGAAACTAAGCGTTCACTTGGAGGCTGGCCAGAGCCAGTGAAGTGTTaGGAACCAGGCAGTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TASQDNLPETKRSLGGWPEPVKC*EPGSPH Trigger: ATGGGGACTGCCTGGTTCTCAACACTTCACTGGCTC...TGGCCAGCCTCCAAGTGAACGCTTAGTTTCAGGCAGATTGTCCTGGCTGGCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CAA 72 bp | GGAGGAGGCAATGTCTCATGCTCCTGCAGCTTATCCTaGAGCCCAAGGCTCCTGGAAAGGGACTCATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGGNVSCSCSLS*SPRLLERDSWQ Trigger: CTGCCATGAGTCCCTTTCCAGGAGCCTTGGGCTCAAGGATAAGCTGCAGGAGCATGAGACATTGCCTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CAA 72 bp | ACCCACCAGCCTTGGGTCTGGGCCATCCACGGTTGGTaGCTAATGGCCTGGAGCTGCATATGTAATAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: THQPWVWAIHGW*LMAWSCICNSS Trigger: GGAGCTATTACATATGCAGCTCCAGGCCATTAGCAACCAACCGTGGATGGCCCAGACCCAAGGCTGGTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR GCA 90 bp | TCAAATCTGTGCCTGGGATGGCTTACCCATAGTATAGTGTACACTAGCAACAGCGCTGGCGCGGGGAGGTaGATGTCCGTGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNLCLGWLTHSIVYTSNSAGAGR*MSVARK Trigger: CTTCCTGGCCACGGACATGCACCTCCCCGCGCCAGC...GCTGTTGCTAGTGTACACTATACTATGGGTAAGCCATCCCAGGCACAGATTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR GCA 90 bp | ACGGCCAGCCAGGACAATCTGCCTGAAACTAAGCGTTCACTTGGAGGCTGGCCAACCACACAGACAAGTTaGCCAGCAGCAGAGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: TASQDNLPETKRSLGGWPTTQTS*PAAEKT Trigger: GGTTTTCTCTGCTGCTGGGCAACTTGTCTGTGTGGT...TGGCCAGCCTCCAAGTGAACGCTTAGTTTCAGGCAGATTGTCCTGGCTGGCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR CCA 90 bp | GAAAAGTCATCTTGGGAGCACCGTAGTTGGAGGAGAAGGACACATTCCCTAGCCGGAGGTGCATGTCCGTaGCCAGGAAGACTATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: EKSSWEHRSWRRRTHSLAGGACP*PGRLSP Trigger: CGGAGATAGTCTTCCTGGCCACGGACATGCACCTCC...GGCTAGGGAATGTGTCCTTCTCCTCCAACTACGGTGCTCCCAAGATGACTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR CCA 90 bp | AGTTTGATGCCTTCTTTCTGGCTGCATCTCTGGTGCATCTTACTTATCCTGCCTGATGATCCAGTCGGCTaGCGCGGGGAGGTGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLMPSFWLHLWCILLILPDDPVG*RGEVHV Trigger: GACATGCACCTCCCCGCGCCAGCCGACTGGATCATC...AGGCAGGATAAGTAAGATGCACCAGAGATGCAGCCAGAAAGAAGGCATCAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CAA 72 bp | CCTCTGTGGGCAAAGTTAGTTGTGCTTCACCAGCCCTaGATAGAGGAAGCCTGGGCTCAGAATCCCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLWAKLVVLHQP*IEEAWAQNPSK Trigger: TTTGCTGGGATTCTGAGCCCAGGCTTCCTCTATCAAGGGCTGGTGAAGCACAACTAACTTTGCCCACAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR TCA 90 bp | GAAAGAAGACGGGTAATAAAAAGGTCCTGCTGTTTAGAGGTCCAAGGTGCACAGGGTTGTGCGTGGGGTTaGCCACACAGACAAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERRRVIKRSCCLEVQGAQGCAWG*PHRQVA Trigger: GGCAACTTGTCTGTGTGGTCAACCCCACGCACAACC...CTGTGCACCTTGGACCTCTAAACAGCAGGACCTTTTTATTACCCGTCTTCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR TCA 90 bp | GAAAGAAGACGGGTAATAAAAAGGTCCTGCTGTTTAGAGGTCCAAGGTGCACAGTACAGGTGGTTGTGGTaGCAGTGGTGGCGATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERRRVIKRSCCLEVQGAQYRWLW*QWWRWW Trigger: CCACCATCGCCACCACTGTCACCACAACCACCTGTA...CTGTGCACCTTGGACCTCTAAACAGCAGGACCTTTTTATTACCCGTCTTCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR TCA 90 bp | CAAACGCACACTCTTTTGTTTGGTCTTAGCTTGCTCCTTTGTCTTCTGTTCTTCTGGATTTGCCGCAGGTaGGGAACCACCACCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTHTLLFGLSLLLCLLFFWICRR*GTTTSR Trigger: CCTGGAGGTGGTGGTTCCTCACCTGCGGCAAATCCA...GAAGAACAGAAGACAAAGGAGCAAGCTAAGACCAAACAAAAGAGTGTGCGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR GCA 90 bp | GAAAAGTCATCTTGGGAGCACCGTAGTTGGAGGAGAAGGACACATTCCCTAGCCACATACTTTAGGTTGTaGGTGGGGTTGACCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: EKSSWEHRSWRRRTHSLATYFRL*VGLTTQ Trigger: CTGTGTGGTCAACCCCACGCACAACCTAAAGTATGT...GGCTAGGGAATGTGTCCTTCTCCTCCAACTACGGTGCTCCCAAGATGACTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR GCA 90 bp | TGGCCATTGGGCTGGAAGAACAGAAGCGGAAAGATACATTTAGTACTGAGATACTGGCCCAGGCAGGAGTaGATGATGATCCAGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WPLGWKNRSGKIHLVLRYWPRQE*MMIQSA Trigger: AGCCGACTGGATCATCATGCACTCCTGCCTGGGCCA...GTATCTCAGTACTAAATGTATCTTTCCGCTTCTGTTCTTCCAGCCCAATGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR CCA 90 bp | AGTTTGATGCCTTCTTTCTGGCTGCATCTCTGGTGCATCTTACTTATCCTGCCTAGCAGTCGGCCTGAGTaGGAGTCCCAATCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SLMPSFWLHLWCILLILPSSRPE*ESQSAS Trigger: TGATGCTGATTGGGACTCCCACTCAGGCCGACTGCT...AGGCAGGATAAGTAAGATGCACCAGAGATGCAGCCAGAAAGAAGGCATCAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR GCA 90 bp | TCAAATCTGTGCCTGGGATGGCTTACCCATAGTATAGTGTACACTAGCAACAGCTTCCAATGGCGAGGCTaGCGTTGTCAGAGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNLCLGWLTHSIVYTSNSFQWRG*RCQRRA Trigger: AGCTCTTCTCTGACAACGGCAGCCTCGCCATTGGAA...GCTGTTGCTAGTGTACACTATACTATGGGTAAGCCATCCCAGGCACAGATTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR TCA 90 bp | CATGACAAGTTAGGCTCTATTCGAAACAGACCGAAGATGGAAGATGTTTTTGGTTGGTGGTGGGGAAGATaGTGTGGGTGGAAGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: HDKLGSIRNRPKMEDVFGWWWGR*CGWKLP Trigger: AGGTAGCTTCCACCCACATCATCTTCCCCACCACCA...ACCAAAAACATCTTCCATCTTCGGTCTGTTTCGAATAGAGCCTAACTTGTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CAA 72 bp | ACACAAACCTTTCCTTGGCAACTCACAGCGTCATCTTaGTGCTCCTCTGTGGGCAAAGTTAGTTGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQTFPWQLTASS*CSSVGKVSCAS Trigger: TGAAGCACAACTAACTTTGCCCACAGAGGAGCACAAAGATGACGCTGTGAGTTGCCAAGGAAAGGTTTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CAA 72 bp | ACACACACACACACACAGCAGCTTCATGTGGTTCTTTaGAGGGTTACATGGGGTAACATGTTCCGAGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTQQLHVVL*RVTWGNMFRVC Trigger: GCATACTCGGAACATGTTACCCCATGTAACCCTCAAAAGAACCACATGAAGCTGCTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR TCA 90 bp | TTCCGGTGCTTCCTTCTGCAAATGCTGACCTATTCCAAAGCAACCATGTTTATGTTGTCAGAGAAGAGCTaGGCCAGTGAAGTGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRCFLLQMLTYSKATMFMLSEKS*ASEVLR Trigger: TCTCAACACTTCACTGGCTCAGCTCTTCTCTGACAA...CATAAACATGGTTGCTTTGGAATAGGTCAGCATTTGCAGAAGGAAGCACCGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR TCA 90 bp | ACACATTCCCTAGCCTTTATTTTGGAGATTTCTAGGAACCACCTTTCAAATCTGGTCGTTCCTGTTTCCTaGGCACCAGCAGGAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: THSLAFILEISRNHLSNLVVPVS*APAGSD Trigger: ATCACTTCCTGCTGGTGCTCAGGAAACAGGAACGAC...CAGATTTGAAAGGTGGTTCCTAGAAATCTCCAAAATAAAGGCTAGGGAATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR TCA 90 bp | AAGGGTAGTGTGTTTTTAGATGAATTAATTCTGGTAGAGAAAAGATTGCTGACGGGGTGGCCTCCCATTTaGGACGCCTGTGGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGSVFLDELILVEKRLLTGWPPI*DACGFC Trigger: ACAGAAACCACAGGCGTCTCAAATGGGAGGCCACCC...CGTCAGCAATCTTTTCTCTACCAGAATTAATTCATCTAAAAACACACTACCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| CDS-3UTR TCA 90 bp | ACACATTCCCTAGCCTTTATTTTGGAGATTTCTAGGAACCACCTTTCAAATCTGGAAGAGCTGAGCCAGTaGAGTGTTGAGAACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: THSLAFILEISRNHLSNLEELSQ*SVENQA Trigger: TGCCTGGTTCTCAACACTTCACTGGCTCAGCTCTTC...CAGATTTGAAAGGTGGTTCCTAGAAATCTCCAAAATAAAGGCTAGGGAATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
||
| 3UTR CAA 72 bp | CTGAGATCTATAAGCACTGAGTGTCTTCTTGAGGTGTaGTGTGTTTGTTTAGATGGGGTACCTGGGATACTC | + |
|
Preference number: 4 (lower is better) Translates to: LRSISTECLLEV*CVCLDGVPGIL Trigger: GAGTATCCCAGGTACCCCATCTAAACAAACACACAACACCTCAAGAAGACACTCAGTGCTTATAGATCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CAA 72 bp | AGTTGGAGGAGAAGGACACATTCCCTAGCCTTTATTTaGGAGATTTCTAGGAACCACCTTTCAAATCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SWRRRTHSLAFI*EISRNHLSNLC Trigger: GCACAGATTTGAAAGGTGGTTCCTAGAAATCTCCAAAATAAAGGCTAGGGAATGTGTCCTTCTCCTCCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CAA 72 bp | CTTCATTGTACTGCTAAACCTCCAGCAGTCATTCATTaGGCTCAGACTCACAAGGAGACATGTTTCCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: LHCTAKPPAVIH*AQTHKETCFPL Trigger: TAAAGGGAAACATGTCTCCTTGTGAGTCTGAGCCAAATGAATGACTGCTGGAGGTTTAGCAGTACAATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CAA 72 bp | GGAGGTCCGGCTTGCTTTTCCCTGCGGTGCTTATGTTaGATGATGGATCTTATTTATAAACTATCAACAAAC | + |
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Preference number: 4 (lower is better) Translates to: GGPACFSLRCLC*MMDLIYKLSTN Trigger: GTTTGTTGATAGTTTATAAATAAGATCCATCATCAAACATAAGCACCGCAGGGAAAAGCAAGCCGGACCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CAA 72 bp | GTGTTTTTAGATGAATTAATTCTGGTAGAGAAAAGATaGCTGACGGCCAGCCAGGACAATCTGCCTGAAACT | + |
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Preference number: 4 (lower is better) Translates to: VFLDELILVEKR*LTASQDNLPET Trigger: AGTTTCAGGCAGATTGTCCTGGCTGGCCGTCAGCAATCTTTTCTCTACCAGAATTAATTCATCTAAAAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| 3UTR CAA 72 bp | AAAGAAGAGAGCAATAGCACTCAAACGCACACTCTTTaGTTTGGTCTTAGCTTGCTCCTTTGTCTTCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: KEESNSTQTHTL*FGLSLLLCLLF Trigger: GAACAGAAGACAAAGGAGCAAGCTAAGACCAAACAAAAGAGTGTGCGTTTGAGTGCTATTGCTCTCTTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS GCA 90 bp | CCCAGGCAGGAGTGCATGATGATCCAGTCGGCTGGCGCGGGGAGGTaGATGTCCGTGGCCAGGAAGACTATCTCCGCCCCTTGCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: PRQECMMIQSAGAGR*MSVARKTISAPCRM Trigger: CATCCTGCAAGGGGCGGAGATAGTCTTCCTGGCCACGGACATGCACCTCCCCGCGCCAGCCGACTGGATCATCATGCACTCCTGCCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS-3UTR CAA 90 bp | CACGAACTGGTCTCTCCCAGGGCTGACCCACCAGCCTTGGGTCTGGGCCATCCAGACACATACTTTAGGTaGTGCGTGGGGTTGACCACA | + |
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Preference number: 5 (lower is better) Translates to: HELVSPRADPPALGLGHPDTYFR*CVGLTT Trigger: TGTGGTCAACCCCACGCACAACCTAAAGTATGTGTC...TGGATGGCCCAGACCCAAGGCTGGTGGGTCAGCCCTGGGAGAGACCAGTTCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS TCA 90 bp | GTGATGGCGATTCCAATGGCGAGGCTGCCGTTGTCAGAGAAGAGCTaGGCCAGTGAAGTGTTGAGAACCAGGCAGTCCCCATCGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: VMAIPMARLPLSEKS*ASEVLRTRQSPSVM Trigger: CATCACCGATGGGGACTGCCTGGTTCTCAACACTTCACTGGCTCAGCTCTTCTCTGACAACGGCAGCCTCGCCATTGGAATCGCCATCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS-3UTR CAA 90 bp | GAAAGAAGACGGGTAATAAAAAGGTCCTGCTGTTTAGAGGTCCAAGGTGCACAGGGGGTGGCCTCCCATTaGAGACGCCTGTGGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: ERRRVIKRSCCLEVQGAQGVASH*RRLWFL Trigger: CAGAAACCACAGGCGTCTCAAATGGGAGGCCACCCC...CTGTGCACCTTGGACCTCTAAACAGCAGGACCTTTTTATTACCCGTCTTCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS-3UTR CAA 90 bp | TCAAATCTGTGCCTGGGATGGCTTACCCATAGTATAGTGTACACTAGCAACAGCTGGGTGGAAGCTACCTaGCTCTGCGGAGTTCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: SNLCLGWLTHSIVYTSNSWVEAT*LCGVLS Trigger: ACTCAGAACTCCGCAGAGCAAGGTAGCTTCCACCCA...GCTGTTGCTAGTGTACACTATACTATGGGTAAGCCATCCCAGGCACAGATTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS-3UTR CAA 90 bp | TACTGTCTGTCTAGACCCTCTACTAAAACATATACATTCCTCAAAGAGTACCGTAGGTTGTGCGTGGGGTaGACCACACAGACAAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: YCLSRPSTKTYTFLKEYRRLCVG*TTQTSC Trigger: GCAACTTGTCTGTGTGGTCAACCCCACGCACAACCT...ACGGTACTCTTTGAGGAATGTATATGTTTTAGTAGAGGGTCTAGACAGACAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS CCA 72 bp | ATGGCCCAGGCAGGAGTGCATGATGATCCAGTCGGCTaGCGCGGGGAGGTGCATGTCCGTGGCCAGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: MAQAGVHDDPVG*RGEVHVRGQED Trigger: GTCTTCCTGGCCACGGACATGCACCTCCCCGCGCCAGCCGACTGGATCATCATGCACTCCTGCCTGGGCCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS TCA 72 bp | TCTCTGCAGCATCCCTGGCTCCGACGTCCGTCTCCGTaGTGGCGATTCCAATGGCGAGGCTGCCGTTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SLQHPWLRRPSP*WRFQWRGCRCQ Trigger: CTGACAACGGCAGCCTCGCCATTGGAATCGCCATCACGGAGACGGACGTCGGAGCCAGGGATGCTGCAGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS CAA 90 bp | CGCGGGGAGGTGCATGTCCGTGGCCAGGAAGACTATCTCCGCCCCTaGCAGGATGTCAATCCTGTGGATTTGCCGCAGGTGAGGAACCAC | + |
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Preference number: 6 (lower is better) Translates to: RGEVHVRGQEDYLRP*QDVNPVDLPQVRNH Trigger: GTGGTTCCTCACCTGCGGCAAATCCACAGGATTGACATCCTGCAAGGGGCGGAGATAGTCTTCCTGGCCACGGACATGCACCTCCCCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS TCA 72 bp | CCTTGCAGGATGTCAATCCTGTGGATTTGCCGCAGGTaGGGAACCACCACCTCCAGGTGGCCTTCCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: PCRMSILWICRR*GTTTSRWPSHW Trigger: CCAGTGGGAAGGCCACCTGGAGGTGGTGGTTCCTCACCTGCGGCAAATCCACAGGATTGACATCCTGCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS CAA 90 bp | CAGGAAGACTATCTCCGCCCCTTGCAGGATGTCAATCCTGTGGATTaGCCGCAGGTGAGGAACCACCACCTCCAGGTGGCCTTCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: QEDYLRPLQDVNPVD*PQVRNHHLQVAFPL Trigger: CAGTGGGAAGGCCACCTGGAGGTGGTGGTTCCTCACCTGCGGCAAATCCACAGGATTGACATCCTGCAAGGGGCGGAGATAGTCTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS TCA 72 bp | AGTGTTGAGAACCAGGCAGTCCCCATCGGTGATGACTaGGTCCACACACTCCAGGACAGATCTCGGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SVENQAVPIGDD*VHTLQDRSRGG Trigger: GCCACCCCGAGATCTGTCCTGGAGTGTGTGGACTCAGTCATCACCGATGGGGACTGCCTGGTTCTCAACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS CAA 72 bp | GTGCATGTCCGTGGCCAGGAAGACTATCTCCGCCCCTaGCAGGATGTCAATCCTGTGGATTTGCCGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VHVRGQEDYLRP*QDVNPVDLPQV Trigger: CACCTGCGGCAAATCCACAGGATTGACATCCTGCAAGGGGCGGAGATAGTCTTCCTGGCCACGGACATGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS CAA 72 bp | ACACACTCCAGGACAGATCTCGGGGTGGCCTCCCATTaGAGACGCCTGTGGTTTCTGTTGAGCTCCAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: THSRTDLGVASH*RRLWFLLSSRR Trigger: TCGCCTGGAGCTCAACAGAAACCACAGGCGTCTCAAATGGGAGGCCACCCCGAGATCTGTCCTGGAGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS GCA 72 bp | GTGGGGAAGATGATGTGGGTGGAAGCTACCTTGCTCTaGGGAGTTCTGAGTGATCCCCCGTCTACTAGACAC | + |
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Preference number: 6 (lower is better) Translates to: VGKMMWVEATLL*GVLSDPPSTRH Trigger: GTGTCTAGTAGACGGGGGATCACTCAGAACTCCGCAGAGCAAGGTAGCTTCCACCCACATCATCTTCCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS CAA 72 bp | ATGGTGGTGGGGAAGATGATGTGGGTGGAAGCTACCTaGCTCTGCGGAGTTCTGAGTGATCCCCCGTCTACT | + |
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Preference number: 6 (lower is better) Translates to: MVVGKMMWVEAT*LCGVLSDPPST Trigger: AGTAGACGGGGGATCACTCAGAACTCCGCAGAGCAAGGTAGCTTCCACCCACATCATCTTCCCCACCACCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS GCA 72 bp | GTGATCCCCCGTCTACTAGACACATACTTTAGGTTGTaGGTGGGGTTGACCACACAGACAAGTTGCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VIPRLLDTYFRL*VGLTTQTSCPA Trigger: TGCTGGGCAACTTGTCTGTGTGGTCAACCCCACGCACAACCTAAAGTATGTGTCTAGTAGACGGGGGATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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| CDS CAA 72 bp | CGTCTACTAGACACATACTTTAGGTTGTGCGTGGGGTaGACCACACAGACAAGTTGCCCAGCAGCAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: RLLDTYFRLCVG*TTQTSCPAAEK Trigger: TTTCTCTGCTGCTGGGCAACTTGTCTGTGTGGTCAACCCCACGCACAACCTAAAGTATGTGTCTAGTAGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164848.3 |
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