Pregenerated sensors for SIAE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001942Ensembl transcript IDs: ENSMUST00000002007.5, ENSMUST00000213126.2, ENSMUST00000213964.2, ENSMUST00000215474.2, ENSMUST00000215829.2
Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAACACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTaGTCCGAGAGTCCACAGTCCGAGAGTAGTGAAGAAGGGCACGAA | + |
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Preference number: 1 (lower is better) Translates to: RTHKAPASTAFKVPC*SESPQSESSEEGHE Trigger: TTCGTGCCCTTCTTCACTACTCTCGGACTGTGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| 3UTR TCA 90 bp | TTCAAGAGTTTGGGGGCCCAGGAAGTCAAAGTCCAAGATGTCTGGTaGTGGCTTGCCCCCTGGTTCTTAGATTGCTGTCTTGCTATGACG | + |
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Preference number: 1 (lower is better) Translates to: FKSLGAQEVKVQDVW*WLAPWFLDCCLAMT Trigger: CGTCATAGCAAGACAGCAATCTAAGAACCAGGGGGCAAGCCATCACCAGACATCTTGGACTTTGACTTCCTGGGCCCCCAAACTCTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR TCA 90 bp | CACCTGAAATCTCCATCCCAGTGTAGCCCAATTCAGTCTTCAGATTaGACAGGAAAGGGGTGGAGCCCCCTGCCTTCTCCTCATTATGAG | + |
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Preference number: 1 (lower is better) Translates to: HLKSPSQCSPIQSSD*TGKGWSPLPSPHYE Trigger: CTCATAATGAGGAGAAGGCAGGGGGCTCCACCCCTTTCCTGTTCAATCTGAAGACTGAATTGGGCTACACTGGGATGGAGATTTCAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR GCA 90 bp | TGTGTTCTCAGGGGGCCAGATGCAGAGAGAGCATTAGAAGATAAATaGAGGCTAGAACACCTCAGAGGTCAAAGGCCTCTGCAGAATGTA | + |
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Preference number: 1 (lower is better) Translates to: CVLRGPDAERALEDK*RLEHLRGQRPLQNV Trigger: TACATTCTGCAGAGGCCTTTGACCTCTGAGGTGTTCTAGCCTGCATTTATCTTCTAATGCTCTCTCTGCATCTGGCCCCCTGAGAACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR TCA 90 bp | AGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCTGTGCACAGGTaGCAGTTACACTCCTCTCCCATGCTTCAAGGGCACAGTGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: SSHFLTSKNKRAVHR*QLHSSPMLQGHSVR Trigger: CCTTACACTGTGCCCTTGAAGCATGGGAGAGGAGTGTAACTGTCACCTGTGCACAGCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR CCA 90 bp | ATCTCTCTTGCTGTTTCTAATGGCTCCAGAGCCCCCAGAGAATGGTaGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCACATCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: ISLAVSNGSRAPREW*EVLIASVPTFSHQR Trigger: TCTTTGATGTGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCCATTAGAAACAGCAAGAGAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR GCA 90 bp | ATTGCTTCAGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCTGTaGACAGGTGACAGTTACACTCCTCTCCCATGCTTCAAGGGCACA | + |
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Preference number: 1 (lower is better) Translates to: IASVPTFSHQRTKEL*TGDSYTPLPCFKGT Trigger: TGTGCCCTTGAAGCATGGGAGAGGAGTGTAACTGTCACCTGTGCACAGCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACTGAAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR TCA 90 bp | TCTGTCAGAGGCGACCTGAAAGGCCTGTCATGGGGTAGTAAGGTTTaGCAAGAGCATTGTTTTACAGAAGGAAACACATGGAAACTTGCA | + |
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Preference number: 1 (lower is better) Translates to: SVRGDLKGLSWGSKV*QEHCFTEGNTWKLA Trigger: TGCAAGTTTCCATGTGTTTCCTTCTGTAAAACAATGCTCTTGTCAAACCTTACTACCCCATGACAGGCCTTTCAGGTCGCCTCTGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR CCA 90 bp | CCCTGCCTTCTCCTCATTATGAGTTTTAAACGAAAACTCACTCTGTaGAAGGAGGCAGCATCTGAGAAACAGGGAAGATACACGTTTCAT | + |
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Preference number: 1 (lower is better) Translates to: PCLLLIMSFKRKLTL*KEAASEKQGRYTFH Trigger: ATGAAACGTGTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACAGAGTGAGTTTTCGTTTAAAACTCATAATGAGGAGAAGGCAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR CCA 90 bp | TCTATAAGCATGTTCTGTAACTTTCAGCCTAACTTCTTCCTTCCGTaGGAATTAGGCTTAGGCTTAGTTGAACTTTTACCTCAGGGACCT | + |
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Preference number: 1 (lower is better) Translates to: SISMFCNFQPNFFLP*ELGLGLVELLPQGP Trigger: AGGTCCCTGAGGTAAAAGTTCAACTAAGCCTAAGCCTAATTCCCACGGAAGGAAGAAGTTAGGCTGAAAGTTACAGAACATGCTTATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR CCA 90 bp | CTTAGATTGCTGTCTTGCTATGACGGCATAATGGGAGGGAGTTCTTaGATCCCTTTTATAAGGAAACTAATTCTATGCAGAGTCATTCTG | + |
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Preference number: 1 (lower is better) Translates to: LRLLSCYDGIMGGSS*IPFIRKLILCRVIL Trigger: CAGAATGACTCTGCATAGAATTAGTTTCCTTATAAAAGGGATCCAAGAACTCCCTCCCATTATGCCGTCATAGCAAGACAGCAATCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR CCA 90 bp | CAGGGTAAACCTCAGTTGCTTGTACTTTCAGTAATAAATATATCCTaGCAGTTTCGGTTATTTGTTTCTTCTTGTAGTCGGGATATGATC | + |
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Preference number: 1 (lower is better) Translates to: QGKPQLLVLSVINIS*QFRLFVSSCSRDMI Trigger: GATCATATCCCGACTACAAGAAGAAACAAATAACCGAAACTGCCAGGATATATTTATTACTGAAAGTACAAGCAACTGAGGTTTACCCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTGTGTCCCTGTGCCTGTaGTTTCCCCACCCTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: GSRAPREWWEVLIASVPTVSLCL*FPHPLP Trigger: AGGCAGAGGGTGGGGAAATCACAGGCACAGGGACAC...AGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTTGGGGGCCCAGGAAGTCAAAGTCCAAGATGTCTGGTGATGGCTTGCCCGTGTCCCTGTGCCTGTaGTTTCCCCACCCTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: RVWGPRKSKSKMSGDGLPVSLCL*FPHPLP Trigger: AGGCAGAGGGTGGGGAAATCACAGGCACAGGGACAC...GGGCAAGCCATCACCAGACATCTTGGACTTTGACTTCCTGGGCCCCCAAACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACCTCTGCCTGAGAACCTaGAGTGGGCCCTCTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: WLQSPQRMVGSPHCFSSHLCLRT*SGPSFF Trigger: GAAGAAAGAGGGCCCACTGCAGGTTCTCAGGCAGAG...GTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGTTTGGGGGCCCAGGAAGTCAAAGTCCAAGATGTCTGGTGATGGCTTGCCCGATTTCCCCACCCTCTaGCTGAGAACCTGCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: RVWGPRKSKSKMSGDGLPDFPTL*LRTCSG Trigger: CCCACTGCAGGTTCTCAGGCAGAGGGTGGGGAAATC...GGGCAAGCCATCACCAGACATCTTGGACTTTGACTTCCTGGGCCCCCAAACTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTCCACTCCTTAGCACATaGCAATATGCACAGATTCCC | + |
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Preference number: 2 (lower is better) Translates to: GSRAPREWWEVLIASVPTPLLST*QYAQIP Trigger: GGGAATCTGTGCATATTGCCATGTGCTAAGGAGTGG...AGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR CAA 90 bp | GCCTTTGTGTCATCTTACCAGCCAGAGTTCCTGACACACGAACCCTaGGTTGACACTGACCTGCAGCACCTGAAATCTCCATCCCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: AFVSSYQPEFLTHEP*VDTDLQHLKSPSQC Trigger: ACACTGGGATGGAGATTTCAGGTGCTGCAGGTCAGTGTCAACCAAGGGTTCGTGTGTCAGGAACTCTGGCTGGTAAGATGACACAAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGATTTCCCCACCCTCTGCCTGAGAACCTGCAGTGGGCCCTCTTTCTTCCTTCCACTCCTTAGCACATaGCAATATGCACAGATTCCC | + |
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Preference number: 2 (lower is better) Translates to: CDFPTLCLRTCSGPSFFLPLLST*QYAQIP Trigger: GGGAATCTGTGCATATTGCCATGTGCTAAGGAGTGG...AAGGAAGAAAGAGGGCCCACTGCAGGTTCTCAGGCAGAGGGTGGGGAAATCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTAACTTCTTCCTTCCGTaGGAATTAGGCTTAGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: GSRAPREWWEVLIASVPTNFFLP*ELGLGL Trigger: TAAGCCTAAGCCTAATTCCCACGGAAGGAAGAAGTT...AGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTTTCAGTGATAAAAACACATaGTCTGTCAGAGGCGACCTG | + |
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Preference number: 2 (lower is better) Translates to: SRAPREWWEVLIASVPTFSDKNT*SVRGDL Trigger: CAGGTCGCCTCTGACAGATCATGTGTTTTTATCACT...GAAAGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR GCA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCAAGGGGTTTATCCCATTaGCCTAAAAACAGCAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: HKAPASTAFKVPCWSESPRGLSH*PKNSSH Trigger: ATGACTGCTGTTTTTAGGGCAATGGGATAAACCCCT...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| 3UTR-3UTR GCA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCAGTATCTGCTAGCCTGTaGTTATGTCAGAATACTGGA | + |
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Preference number: 2 (lower is better) Translates to: HKAPASTAFKVPCWSESPVSASL*LCQNTG Trigger: TCCAGTATTCTGACATAAGCACAGGCTAGCAGATAC...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTTGGGGGCCCAGGAAGTCAAAGTCCAAGATGTCTGGTGATGGCTTGCCCAACTTCTTCCTTCCGTaGGAATTAGGCTTAGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: RVWGPRKSKSKMSGDGLPNFFLP*ELGLGL Trigger: TAAGCCTAAGCCTAATTCCCACGGAAGGAAGAAGTT...GGGCAAGCCATCACCAGACATCTTGGACTTTGACTTCCTGGGCCCCCAAACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATGTGGTGCGCTGATGTACGCCCCCAGAGAATGGTaGGAAGTCCTCATTGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: VAEYMLYVPVIGCGALMYAPREW*EVLIAS Trigger: TGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGC...GTACATCAGCGCACCACATCCAATAACTGGTACATACAGCATATACTCTGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATGTGGTGCGCTGATGTACGTGACTAACACGGGTTaGCAGGACAGGCAGGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: VAEYMLYVPVIGCGALMYVTNTG*QDRQVD Trigger: ATCTACCTGCCTGTCCTGCCAACCCGTGTTAGTCAC...GTACATCAGCGCACCACATCCAATAACTGGTACATACAGCATATACTCTGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGGCAGGTAGATTTTACTTTTTCTCAGGAGCTGGTGGTTCCTAGGTTTGTGGAGTATGAGTTAGGCTaGCAACAGCTTTGGAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: DRQVDFTFSQELVVPRFVEYELG*QQLWRA Trigger: GGCTCTCCAAAGCTGTTGTCAGCCTAACTCATACTC...CACAAACCTAGGAACCACCAGCTCCTGAGAAAAAGTAAAATCTACCTGCCTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGGGTTTAGGATTAACAAGTTGAGTCCGTGGCAGCTGCTGATTCATGACAGGCTTAGGCTTAGTTaGACTTTTACCTCAGGGACC | + |
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Preference number: 2 (lower is better) Translates to: HRGFRINKLSPWQLLIHDRLRLS*TFTSGT Trigger: GGTCCCTGAGGTAAAAGTTCAACTAAGCCTAAGCCT...GTCATGAATCAGCAGCTGCCACGGACTCAACTTGTTAATCCTAAACCCTCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR-3UTR GCA 90 bp | TCATTGCTTCAGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCTGTGCACAGAGAACAGCTCACCTCTaGCCTCCTGAGTGCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: SLLQFPLSHIKEQKSCAQRTAHL*PPECWD Trigger: ATCCCAGCACTCAGGAGGGCAGAGGTGAGCTGTTCT...CTGTGCACAGCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACTGAAGCAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGGGTTTAGGATTAACAAGTTGAGTCCGTGGCAGCTGCTGATTCATGACGTGGGAAGTCCTCATTaGTTCAGTTCCCACTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: HRGFRINKLSPWQLLIHDVGSPH*FSSHFL Trigger: GAGAAAGTGGGAACTGAAGCAATGAGGACTTCCCAC...GTCATGAATCAGCAGCTGCCACGGACTCAACTTGTTAATCCTAAACCCTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAAACAAGCCGGGCCAATGTTCAGCAGGGCACTGTTTCTCCTTCAGTTAAAATCTCAGGGGGCCAGATaGAGAGAGAGCATTAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: TKQAGPMFSRALFLLQLKSQGAR*RESIRR Trigger: TCTTCTAATGCTCTCTCTGCATCTGGCCCCCTGAGA...TTTTAACTGAAGGAGAAACAGTGCCCTGCTGAACATTGGCCCGGCTTGTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCGGGCCATATGCTAGCTaGGAGCTATTCAATGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GKSSLLQFPLSHIKEQKSGPYAS*ELFNEG Trigger: CCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCC...GCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR CAA 90 bp | TTTCTAATGGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATaGCTTCAGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: FLMAPEPPENGGKSS*LQFPLSHIKEQKSC Trigger: ACAGCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCCATTAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR CAA 90 bp | ATGAAGTTGCTGAGTGCAGTAACCCATGCCTTTAATCTGAGTACTTaGGAGGTAGAGGGAGCTGAATTCAAGGCCATCCTGGTCCACATA | + |
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Preference number: 2 (lower is better) Translates to: MKLLSAVTHAFNLST*EVEGAEFKAILVHI Trigger: TATGTGGACCAGGATGGCCTTGAATTCAGCTCCCTCTACCTCCAAAGTACTCAGATTAAAGGCATGGGTTACTGCACTCAGCAACTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCATGGGGTAGTAAGGTTTaGCAAGAGCATTGTTTTACA | + |
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Preference number: 2 (lower is better) Translates to: RAPREWWEVLIASVPTFSWGSKV*QEHCFT Trigger: TGTAAAACAATGCTCTTGTCAAACCTTACTACCCCA...TGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR GCA 90 bp | CACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCATCTTTTAAAGTCCTaGATACCCAAACTAAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: HTKHQPPQPLKSLAGPRVHLLKS*IPKLKD Trigger: ATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATG...GACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGGGTTTAGGATTAACAAGTTGAGTCCGTGGCAGCTGCTGATTCATGACCTTTTTCTCAGGAGCTaGTGGTTCCTAGGTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: HRGFRINKLSPWQLLIHDLFLRS*WFLGLC Trigger: ACACAAACCTAGGAACCACCAGCTCCTGAGAAAAAG...GTCATGAATCAGCAGCTGCCACGGACTCAACTTGTTAATCCTAAACCCTCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCAGATGCAGAGAGAGCATTAGAAGATAAATGCAGGCTAGAACACCTCAGAATTCCCTTTAGAGTATaGGTTAGGCTGACAACAGCT | + |
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Preference number: 2 (lower is better) Translates to: GPDAERALEDKCRLEHLRIPFRV*VRLTTA Trigger: AGCTGTTGTCAGCCTAACTCATACTCTAAAGGGAAT...TCTGAGGTGTTCTAGCCTGCATTTATCTTCTAATGCTCTCTCTGCATCTGGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCCAGATGCAGAGAGAGCATTAGAAGATAAATGCAGGCTAGAACACCTCAGAAGGGGTTTATCCCATTaGCCTAAAAACAGCAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: GPDAERALEDKCRLEHLRRGLSH*PKNSSH Trigger: ATGACTGCTGTTTTTAGGGCAATGGGATAAACCCCT...TCTGAGGTGTTCTAGCCTGCATTTATCTTCTAATGCTCTCTCTGCATCTGGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATGTGGTGCGCTGATGTACGTATCTGCTAGCCTGTaGTTATGTCAGAATACTGGA | + |
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Preference number: 2 (lower is better) Translates to: VAEYMLYVPVIGCGALMYVSASL*LCQNTG Trigger: TCCAGTATTCTGACATAAGCACAGGCTAGCAGATAC...GTACATCAGCGCACCACATCCAATAACTGGTACATACAGCATATACTCTGCCAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTAGATTGCTGTCTTGCTATGACGGCATAATGGGAGGGAGTTCTTGGATCCAAACCTTAATGCACTaGCTGCCTACATTTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: VLRLLSCYDGIMGGSSWIQTLMH*LPTFMK Trigger: CTTCATAAATGTAGGCAGTCAGTGCATTAAGGTTTG...GATCCAAGAACTCCCTCCCATTATGCCGTCATAGCAAGACAGCAATCTAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR CAA 90 bp | GGAAGATACACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTCAGTaGCTTGTACTTTCAGTAATAAATATATCCTGGCAGTTTCGGTTA | + |
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Preference number: 2 (lower is better) Translates to: GRYTFHCGCSQGKPQ*LVLSVINISWQFRL Trigger: TAACCGAAACTGCCAGGATATATTTATTACTGAAAGTACAAGCAACTGAGGTTTACCCTGGGAACACCCACAATGAAACGTGTATCTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| 3UTR-3UTR TCA 90 bp | TCATTGCTTCAGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCTGTGCACAGTGGGGTAGTAAGGTTTaGCAAGAGCATTGTTTTACA | + |
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Preference number: 2 (lower is better) Translates to: SLLQFPLSHIKEQKSCAQWGSKV*QEHCFT Trigger: TGTAAAACAATGCTCTTGTCAAACCTTACTACCCCA...CTGTGCACAGCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACTGAAGCAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGGCAGGTAGATTTTACTTTTTCTCAGGAGCTGGTGGTTCCTAGGTTTGTGCATCTTTTAAAGTCCTaGATACCCAAACTAAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: DRQVDFTFSQELVVPRFVHLLKS*IPKLKD Trigger: ATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATG...CACAAACCTAGGAACCACCAGCTCCTGAGAAAAAGTAAAATCTACCTGCCTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR-3UTR GCA 90 bp | ATCACCTGTAGGTCTATAAGCATGTTCTGTAACTTTCAGCCTAACTTCTTCCTTAAACACATGGAAACTTaGATAGCCGTTTTCAGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: ITCRSISMFCNFQPNFFLKHMET*IAVFRG Trigger: CCCCCTGAAAACGGCTATGCAAGTTTCCATGTGTTT...AAGGAAGAAGTTAGGCTGAAAGTTACAGAACATGCTTATAGACCTACAGGTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTAACACATGTACTAATGTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATCTCAGGGGGCCAGATaGAGAGAGAGCATTAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: INTCTNVAEYMLYVPVIGSQGAR*RESIRR Trigger: TCTTCTAATGCTCTCTCTGCATCTGGCCCCCTGAGA...TCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCCATCTTTTAAAGTCCTaGATACCCAAACTAAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: GKSSLLQFPLSHIKEQKSHLLKS*IPKLKD Trigger: ATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATG...GCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCAGTTTCGGTTATTTGTTTCTTCTTGTAGTCGGGATATGATCATTTTTGTTAACAAGTTGAGTCCGTaGCAGCTGCTGATTCATGAC | + |
|
Preference number: 2 (lower is better) Translates to: WQFRLFVSSCSRDMIIFVNKLSP*QLLIHD Trigger: GTCATGAATCAGCAGCTGCCACGGACTCAACTTGTT...AACAAAAATGATCATATCCCGACTACAAGAAGAAACAAATAACCGAAACTGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCAGTTTCGGTTATTTGTTTCTTCTTGTAGTCGGGATATGATCATTTTTGTTGCAGCTGCTGATTCATaGCATACACAGATGCTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: WQFRLFVSSCSRDMIIFVAAADS*HTQMLK Trigger: TTTCAGCATCTGTGTATGTCATGAATCAGCAGCTGC...AACAAAAATGATCATATCCCGACTACAAGAAGAAACAAATAACCGAAACTGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTAACACATGTACTAATGTGGCAGAGTATATGCTGTATGTACCAGTTATTGGAAAACACATGGAAACTTaGATAGCCGTTTTCAGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: INTCTNVAEYMLYVPVIGKHMET*IAVFRG Trigger: CCCCCTGAAAACGGCTATGCAAGTTTCCATGTGTTT...TCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCAGTTTCGGTTATTTGTTTCTTCTTGTAGTCGGGATATGATCATTTTTGTTAGAACAAAAGAGCTGTaGACAGGTGACAGTTACACT | + |
|
Preference number: 2 (lower is better) Translates to: WQFRLFVSSCSRDMIIFVRTKEL*TGDSYT Trigger: AGTGTAACTGTCACCTGTGCACAGCTCTTTTGTTCT...AACAAAAATGATCATATCCCGACTACAAGAAGAAACAAATAACCGAAACTGCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTAACACATGTACTAATGTGGCAGAGTATATGCTGTATGTACCAGTTATTGGAGCATTAGAAGATAAATaGAGGCTAGAACACCTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: INTCTNVAEYMLYVPVIGALEDK*RLEHLR Trigger: TCTGAGGTGTTCTAGCCTGCATTTATCTTCTAATGC...TCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR TCA 72 bp | CCCAAGCACATCTACTTCCGCGTGTCCCTGTGCCTGTaGTTTCCCCACCCTCTGCCTGAGAACCTGCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PKHIYFRVSLCL*FPHPLPENLQW Trigger: CCACTGCAGGTTCTCAGGCAGAGGGTGGGGAAATCACAGGCACAGGGACACGCGGAAGTAGATGTGCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR GCA 72 bp | TCCGCGTGTCCCTGTGCCTGTGATTTCCCCACCCTCTaGCTGAGAACCTGCAGTGGGCCCTCTTTCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SACPCACDFPTL*LRTCSGPSFFL Trigger: AAGGAAGAAAGAGGGCCCACTGCAGGTTCTCAGGCAGAGGGTGGGGAAATCACAGGCACAGGGACACGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR TCA 72 bp | CGTGTCCCTGTGCCTGTGATTTCCCCACCCTCTGCCTaGGAACCTGCAGTGGGCCCTCTTTCTTCCTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RVPVPVISPPSA*EPAVGPLSSLR Trigger: CCTTAAGGAAGAAAGAGGGCCCACTGCAGGTTCTCAGGCAGAGGGTGGGGAAATCACAGGCACAGGGACACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR GCA 72 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTaGTGGTCCGAGAGTCCACAGTCCGAGAGTAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HKAPASTAFKVP*WSESPQSESSE Trigger: TTCACTACTCTCGGACTGTGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| 3UTR TCA 72 bp | TTGGGGGCCCAGGAAGTCAAAGTCCAAGATGTCTGGTaGTGGCTTGCCCCCTGGTTCTTAGATTGCTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LGAQEVKVQDVW*WLAPWFLDCCL Trigger: AAGACAGCAATCTAAGAACCAGGGGGCAAGCCATCACCAGACATCTTGGACTTTGACTTCCTGGGCCCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR CCA 72 bp | AAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTaGTCCGAGAGTCCACAGTCCGAGAGTAGTGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KAPASTAFKVPC*SESPQSESSEE Trigger: TTCTTCACTACTCTCGGACTGTGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| 3UTR TCA 72 bp | CACACGAACCCTTGGTTGACACTGACCTGCAGCACCTaGAATCTCCATCCCAGTGTAGCCCAATTCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HTNPWLTLTCST*NLHPSVAQFSL Trigger: AAGACTGAATTGGGCTACACTGGGATGGAGATTTCAGGTGCTGCAGGTCAGTGTCAACCAAGGGTTCGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR TCA 72 bp | ATGAAGCCTTTGTGTCATCTTACCAGCCAGAGTTCCTaGCACACGAACCCTTGGTTGACACTGACCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: MKPLCHLTSQSS*HTNPWLTLTCS Trigger: GCTGCAGGTCAGTGTCAACCAAGGGTTCGTGTGTCAGGAACTCTGGCTGGTAAGATGACACAAAGGCTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR GCA 72 bp | AGGGGGCCAGATGCAGAGAGAGCATTAGAAGATAAATaGAGGCTAGAACACCTCAGAGGTCAAAGGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RGPDAERALEDK*RLEHLRGQRPL Trigger: CAGAGGCCTTTGACCTCTGAGGTGTTCTAGCCTGCATTTATCTTCTAATGCTCTCTCTGCATCTGGCCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR GCA 72 bp | GTGATGGCTTGCCCCCTGGTTCTTAGATTGCTGTCTTaGTATGACGGCATAATGGGAGGGAGTTCTTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: VMACPLVLRLLS*YDGIMGGSSWI Trigger: GATCCAAGAACTCCCTCCCATTATGCCGTCATAGCAAGACAGCAATCTAAGAACCAGGGGGCAAGCCATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR CCA 72 bp | GCTGTTTCTAATGGCTCCAGAGCCCCCAGAGAATGGTaGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: AVSNGSRAPREW*EVLIASVPTFS Trigger: TGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCCATTAGAAACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTGGTTTGACAAGAGCATaGTTTTACAGAAGGAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: GSRAPREWWEVLIASVPTGLTRA*FYRRKH Trigger: GTGTTTCCTTCTGTAAAACAATGCTCTTGTCAAACC...AGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR GCA 72 bp | CCAGGAAGTCAAAGTCCAAGATGTCTGGTGATGGCTTaGCCCCTGGTTCTTAGATTGCTGTCTTGCTATGAC | + |
|
Preference number: 3 (lower is better) Translates to: PGSQSPRCLVMA*PLVLRLLSCYD Trigger: GTCATAGCAAGACAGCAATCTAAGAACCAGGGGGCAAGCCATCACCAGACATCTTGGACTTTGACTTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR CCA 72 bp | GCTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTaGGAGCTATTCAATGAGGGGTTTATCCCATTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: AYVRILEGPYAS*ELFNEGFIPLP Trigger: GGGCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| 3UTR TCA 72 bp | TTTCTCACATCAAAGAACAAAAGAGCTGTGCACAGGTaGCAGTTACACTCCTCTCCCATGCTTCAAGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: FLTSKNKRAVHR*QLHSSPMLQGH Trigger: GTGCCCTTGAAGCATGGGAGAGGAGTGTAACTGTCACCTGTGCACAGCTCTTTTGTTCTTTGATGTGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR GCA 72 bp | GTTCCCACTTTCTCACATCAAAGAACAAAAGAGCTGTaGACAGGTGACAGTTACACTCCTCTCCCATGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VPTFSHQRTKEL*TGDSYTPLPCF Trigger: GAAGCATGGGAGAGGAGTGTAACTGTCACCTGTGCACAGCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR TCA 72 bp | AGCACATGGCAATATGCACAGATTCCCTTTAGAGTATaGGTTAGGCTGACAACAGCTTTGGAGAGCCTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: STWQYAQIPFRV*VRLTTALESLV Trigger: CACTAGGCTCTCCAAAGCTGTTGTCAGCCTAACTCATACTCTAAAGGGAATCTGTGCATATTGCCATGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR TCA 72 bp | ATGTGCTGCTGTAAACAGCCGAGTAATGTGGTGCACTaGTGTACAATCCAGTGGATTATCTCAGGTTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: MCCCKQPSNVVH*CTIQWIISGSQ Trigger: TTGTGAACCTGAGATAATCCACTGGATTGTACATCAGTGCACCACATTACTCGGCTGTTTACAGCAGCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAACAAGCCGGGCCAATGTTCAGCAGGGCACTGTTTCTCCTTCAGTTAAAATCAACTACTAAAAGTTaGGCTCATCCACGACTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TKQAGPMFSRALFLLQLKSTTKS*AHPRLH Trigger: ATGAAGTCGTGGATGAGCCAAACTTTTAGTAGTTGA...TTTTAACTGAAGGAGAAACAGTGCCCTGCTGAACATTGGCCCGGCTTGTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR CCA 72 bp | CTCCTCATTATGAGTTTTAAACGAAAACTCACTCTGTaGAAGGAGGCAGCATCTGAGAAACAGGGAAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: LLIMSFKRKLTL*KEAASEKQGRY Trigger: GTATCTTCCCTGTTTCTCAGATGCTGCCTCCTTCCACAGAGTGAGTTTTCGTTTAAAACTCATAATGAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR GCA 72 bp | TATTTTCCCTTCCTTGGTTGCACTATCAAACTGGTGTaGAAACAAATGATCAGTAGTTGTGCATTTGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: YFPFLGCTIKLV*KQMISSCAFGP Trigger: AGGGCCAAATGCACAACTACTGATCATTTGTTTGCACACCAGTTTGATAGTGCAACCAAGGAAGGGAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213964.2 |
||
| 3UTR TCA 72 bp | TTTGGTGTTTTCTTTGTGTTTAACCAGGTAAACTCCTaGCACATCTCTCTTGCTGTTTCTAATGGCTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FGVFFVFNQVNS*HISLAVSNGSR Trigger: TCTGGAGCCATTAGAAACAGCAAGAGAGATGTGTCAGGAGTTTACCTGGTTAAACACAAAGAAAACACCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR TCA 72 bp | GTACAATCCAGTGGATTATCTCAGGTTCACAACTTTTaGACTGCAAACCTTAATGCACTGACTGCCTACATT | + |
|
Preference number: 3 (lower is better) Translates to: VQSSGLSQVHNF*TANLNALTAYI Trigger: AATGTAGGCAGTCAGTGCATTAAGGTTTGCAGTTCAAAAGTTGTGAACCTGAGATAATCCACTGGATTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR CCA 72 bp | ATGTTCTGTAACTTTCAGCCTAACTTCTTCCTTCCGTaGGAATTAGGCTTAGGCTTAGTTGAACTTTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: MFCNFQPNFFLP*ELGLGLVELLP Trigger: AGGTAAAAGTTCAACTAAGCCTAAGCCTAATTCCCACGGAAGGAAGAAGTTAGGCTGAAAGTTACAGAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR CCA 72 bp | GGCTCATCCACGACTTCATTAACACATGTACTAATGTaGCAGAGTATATGCTGTATGTACCAGTTATTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GSSTTSLTHVLM*QSICCMYQLLD Trigger: ATCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAATGAAGTCGTGGATGAGCC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR GCA 72 bp | CATTGCCCTAAAAACAGCAGTCATCTTTTAAAGTCCTaGATACCCAAACTAAAGGATTTGCCCTTGTATAGA | + |
|
Preference number: 3 (lower is better) Translates to: HCPKNSSHLLKS*IPKLKDLPLYR Trigger: TCTATACAAGGGCAAATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTTAGGGCAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGTTTCGGTTATTTGTTTCTTCTTGTAGTCGGGATATGATCATTTTTGTTCCTACATTTATGAAGTaGCTGAGTGCAGTAACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: WQFRLFVSSCSRDMIIFVPTFMK*LSAVTH Trigger: ATGGGTTACTGCACTCAGCAACTTCATAAATGTAGG...AACAAAAATGATCATATCCCGACTACAAGAAGAAACAAATAACCGAAACTGCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR CCA 72 bp | CCTCAGTTGCTTGTACTTTCAGTAATAAATATATCCTaGCAGTTTCGGTTATTTGTTTCTTCTTGTAGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: PQLLVLSVINIS*QFRLFVSSCSR Trigger: CCGACTACAAGAAGAAACAAATAACCGAAACTGCCAGGATATATTTATTACTGAAAGTACAAGCAACTGAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAACACATGTACTAATGTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATGGTTTGACAAGAGCATaGTTTTACAGAAGGAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: LTHVLMWQSICCMYQLLDGLTRA*FYRRKH Trigger: GTGTTTCCTTCTGTAAAACAATGCTCTTGTCAAACC...ATCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCACCAGATCACAGCCCCTaGAGGCTCCTTCTGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKAPASTAFKVPCWSESPPDHSP*RLLLQH Trigger: GTGCTGCAGAAGGAGCCTTCAGGGGCTGTGATCTGG...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCAGGGAGACAGAGAAGATaGGCACAGACTGGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HKAPASTAFKVPCWSESPGRQRR*AQTGRQ Trigger: CTGCCTACCAGTCTGTGCGCATCTTCTCTGTCTCCC...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCTTCCTGCGGTGGGCTTaGACCATGACAGGTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: HTKHQPPQPLKSLAGPRVFLRWA*TMTGQP Trigger: AGGTTGACCTGTCATGGTCCAAGCCCACCGCAGGAA...GACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | CACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCCTCCTCTGATTGGATaGGGGAGACAGAGAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HTKHQPPQPLKSLAGPRVPPLIG*GRQRRC Trigger: GCATCTTCTCTGTCTCCCTCATCCAATCAGAGGAGG...GACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACCCAAAGTCTGCAGTTTaGTGCCAACGGATCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLQSPQRMVGSPHCFSSHPKSAV*CQRISG Trigger: TCCAGAGATCCGTTGGCATCAAACTGCAGACTTTGG...GTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTCCCCTGTGTGAAATTTaGGCAATGAAGGGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRAPREWWEVLIASVPTPLCEI*AMKGGA Trigger: AGCTCCTCCCTTCATTGCTCAAATTTCACACAGGGG...AGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTTCCTGCGGTGGGCTTaGACCATGACAGGTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SRAPREWWEVLIASVPTFFLRWA*TMTGQP Trigger: AGGTTGACCTGTCATGGTCCAAGCCCACCGCAGGAA...GAAAGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCAGCAGTGGATGGATCATaGCGTTCCAAAGGACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HKAPASTAFKVPCWSESPAVDGS*RSKGRS Trigger: ACTCCGTCCTTTGGAACGCCATGATCCATCCACTGC...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCAAGGTCACTGTCACTGTaGCTCCAGGTGTACCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HKAPASTAFKVPCWSESPRSLSL*LQVYQS Trigger: GCTTTGGTACACCTGGAGCCACAGTGACAGTGACCT...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCACCACCATCCAGGTGTTaGAGGGTTCTTTCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HKAPASTAFKVPCWSESPPPSRC*RVLSHW Trigger: CCAGTGTGAAAGAACCCTCCAACACCTGGATGGTGG...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCAGGTGGGCTTGGACCATaGCAGGTCAACCTCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAPREWWEVLIASVPTFSGGLGP*QVNLSK Trigger: CTTACTGAGGTTGACCTGTCATGGTCCAAGCCCACC...TGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTGTGAAATTTGAGCAATaGAGGGAGGAGCTGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GSRAPREWWEVLIASVPTVKFEQ*REELAT Trigger: TGTTGCCAGCTCCTCCCTTCATTGCTCAAATTTCAC...AGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | CACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCCCCTGTGTGAAATTTaGGCAATGAAGGGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTKHQPPQPLKSLAGPRVPLCEI*AMKGGA Trigger: AGCTCCTCCCTTCATTGCTCAAATTTCACACAGGGG...GACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | CACAGAGGGTTTAGGATTAACAAGTTGAGTCCGTGGCAGCTGCTGATTCATGACCCAGATCACAGCCCCTaGAGGCTCCTTCTGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HRGFRINKLSPWQLLIHDPDHSP*RLLLQH Trigger: GTGCTGCAGAAGGAGCCTTCAGGGGCTGTGATCTGG...GTCATGAATCAGCAGCTGCCACGGACTCAACTTGTTAATCCTAAACCCTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACGTCCCCAAAGTCTGTTaGGCCATCACTTCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WLQSPQRMVGSPHCFSSHVPKVC*AITSKG Trigger: ACCTTTTGAAGTGATGGCGCAACAGACTTTGGGGAC...GTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACATCTGCATGTTACTCTaGCCACTGCAAAGCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: WLQSPQRMVGSPHCFSSHICMLL*PLQSQT Trigger: TGTCTGGCTTTGCAGTGGGCAGAGTAACATGCAGAT...GTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACGACATGGCCAAAGTCTaGAGTTTGATGCCAACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WLQSPQRMVGSPHCFSSHDMAKV*SLMPTD Trigger: ATCCGTTGGCATCAAACTGCAGACTTTGGCCATGTC...GTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTTTGGGGGCCCAGGAAGTCAAAGTCCAAGATGTCTGGTGATGGCTTGCCCATTCACAAGGCCATGTaGTCCAGGCATAGCGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RVWGPRKSKSKMSGDGLPIHKAM*SRHSEQ Trigger: CTGTTCGCTATGCCTGGACCACATGGCCTTGTGAAT...GGGCAAGCCATCACCAGACATCTTGGACTTTGACTTCCTGGGCCCCCAAACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| 3UTR CAA 72 bp | GTTGTTAAGGACCTTGGGCTTGGGGTTCTTCACTACTaGGTCATCGTGACTAACACGGGTTGGCAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVKDLGLGVLHY*VIVTNTGWQDR Trigger: CCTGTCCTGCCAACCCGTGTTAGTCACGATGACCAAGTAGTGAAGAACCCCAAGCCCAAGGTCCTTAACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | CACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCATGGACTCTCAGGGTaGAATTCATTGTCCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTKHQPPQPLKSLAGPRVHGLSG*NSLSPK Trigger: CTTTGGGGACAATGAATTTCACCCTGAGAGTCCATG...GACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCACCGCAGACATGTAAGTaGAATTTCCATGGCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HKAPASTAFKVPCWSESPPQTCK*NFHGPS Trigger: ACTTGGGCCATGGAAATTTCACTTACATGTCTGCGG...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTCAGTGTCCTTCTAGATaGCCAGACTTCAATGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRAPREWWEVLIASVPTQCPSR*PDFNVR Trigger: ACGTACATTGAAGTCTGGTCATCTAGAAGGACACTG...AGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | TGTGATTTCCCCACCCTCTGCCTGAGAACCTGCAGTGGGCCCTCTTTCTTCCTTGATACTTCCAAAGGGTaGGTCTCTATCACAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CDFPTLCLRTCSGPSFFLDTSKG*VSITEV Trigger: GACCTCTGTGATAGAGACTCACCCTTTGGAAGTATC...AAGGAAGAAAGAGGGCCCACTGCAGGTTCTCAGGCAGAGGGTGGGGAAATCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | CACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCGTGAAATTTGAGCAATaGAGGGAGGAGCTGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HTKHQPPQPLKSLAGPRVVKFEQ*REELAT Trigger: TGTTGCCAGCTCCTCCCTTCATTGCTCAAATTTCAC...GACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | CACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCTTCATGATGGTTTCCTaGCCTTGGCACAAGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: HTKHQPPQPLKSLAGPRVFMMVS*PWHKVT Trigger: AGTGACCTTGTGCCAAGGTCAGGAAACCATCATGAA...GACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCATGTTACTCTGCCCACTaGAAAGCCAGACATCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HKAPASTAFKVPCWSESPCYSAH*KARHLQ Trigger: TTGGAGATGTCTGGCTTTGCAGTGGGCAGAGTAACA...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCAGACATGGCCAAAGTCTaGAGTTTGATGCCAACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HKAPASTAFKVPCWSESPDMAKV*SLMPTD Trigger: ATCCGTTGGCATCAAACTGCAGACTTTGGCCATGTC...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | TGTGATTTCCCCACCCTCTGCCTGAGAACCTGCAGTGGGCCCTCTTTCTTCCTTAACTCCTCCTCTGATTaGATGAGGGAGACAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CDFPTLCLRTCSGPSFFLNSSSD*MRETEK Trigger: CTTCTCTGTCTCCCTCATCCAATCAGAGGAGGAGTT...AAGGAAGAAAGAGGGCCCACTGCAGGTTCTCAGGCAGAGGGTGGGGAAATCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTAGGAGACCAACCCAATaGGATATTGCAGAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSRAPREWWEVLIASVPTRRPTQ*DIAECH Trigger: ATGACACTCTGCAATATCCCATTGGGTTGGTCTCCT...AGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACAGGAGACCAACCCAATaGGATATTGCAGAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WLQSPQRMVGSPHCFSSHRRPTQ*DIAECH Trigger: ATGACACTCTGCAATATCCCATTGGGTTGGTCTCCT...GTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCAGCAGTGGATGGATCATaGCGTTCCAAAGGACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RAPREWWEVLIASVPTFSAVDGS*RSKGRS Trigger: ACTCCGTCCTTTGGAACGCCATGATCCATCCACTGC...TGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | GGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTTTCAAAGTCATGTTTTaGAGTGGATGGATCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GSRAPREWWEVLIASVPTFKVMF*SGWIMA Trigger: CGCCATGATCCATCCACTGCAAAACATGACTTTGAA...AGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCAATTTTTCTCACCATATaGCACAGCTCGAGCACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HKAPASTAFKVPCWSESPIFLTI*HSSSTQ Trigger: TTGGGTGCTCGAGCTGTGGCATATGGTGAGAAAAAT...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGCCAAGTTTCCTGCGGTaGGCTTGGACCATGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRPSFLR*AWTMTG Trigger: ACCTGTCATGGTCCAAGCCCACCGCAGGAAACTTGG...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCATACATTCATTCCTCATaGGCTTTATCTCGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HKAPASTAFKVPCWSESPYIHSS*ALSRAD Trigger: GTCAGCCCGAGATAAAGCCCATGAGGAATGAATGTA...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCATGTTTTGCAGTGGATaGATCATGGCGTTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTKHQPPQPLKSLAGPRVMFCSG*IMAFQR Trigger: CCTTTGGAACGCCATGATCCATCCACTGCAAAACAT...GACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCAATGAAGGGAGGAGCTaGCAACATACTGCTGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WRGHMLAGSYSMRGLSHCNEGRS*QHTAGV Trigger: CACACCAGCAGTATGTTGCCAGCTCCTCCCTTCATT...GCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| 3UTR CAA 72 bp | TCATCTTACCAGCCAGAGTTCCTGACACACGAACCCTaGGTTGACACTGACCTGCAGCACCTGAAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSYQPEFLTHEP*VDTDLQHLKSP Trigger: TGGAGATTTCAGGTGCTGCAGGTCAGTGTCAACCAAGGGTTCGTGTGTCAGGAACTCTGGCTGGTAAGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | AGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCCCTGATACTTCCAAAGGGTaGGTCTCTATCACAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGHMLAGSYSMRGLSHCPDTSKG*VSITEV Trigger: GACCTCTGTGATAGAGACTCACCCTTTGGAAGTATC...AGGGCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCGTCCCCAAAGTCTGTTaGGCCATCACTTCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WRGHMLAGSYSMRGLSHCVPKVC*AITSKG Trigger: ACCTTTTGAAGTGATGGCGCAACAGACTTTGGGGAC...GCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCAATCTGCATGTTACTCTaGCCACTGCAAAGCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RAPREWWEVLIASVPTFSICMLL*PLQSQT Trigger: TGTCTGGCTTTGCAGTGGGCAGAGTAACATGCAGAT...TGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCGAGCTGGAAGCCATTTaGAATGACGGTCACTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: WRGHMLAGSYSMRGLSHCELEAI*NDGHYN Trigger: GTTGTAGTGACCGTCATTGCAAATGGCTTCCAGCTC...GCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGCAGTGGATGGATCATaGCGTTCCAAAGGACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRAVDGS*RSKGRS Trigger: ACTCCGTCCTTTGGAACGCCATGATCCATCCACTGC...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTATGTATGAAGACAGCTaGACAAACCCAAATGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRAPREWWEVLIASVPTMYEDS*TNPNGK Trigger: CTTTCCATTTGGGTTTGTCCAGCTGTCTTCATACAT...AGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGCCACCATCCAGGTGTTaGAGGGTTCTTTCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRPPSRC*RVLSHW Trigger: CCAGTGTGAAAGAACCCTCCAACACCTGGATGGTGG...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGATCCAACTCCTCCTCTaGTTGGATGAGGGAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRIQLLL*LDEGDR Trigger: TCTGTCTCCCTCATCCAATCAGAGGAGGAGTTGGAT...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCCAGTGTCCTTCTAGATaGCCAGACTTCAATGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: WRGHMLAGSYSMRGLSHCQCPSR*PDFNVR Trigger: ACGTACATTGAAGTCTGGTCATCTAGAAGGACACTG...GCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTTAGGTAGTGGTCCTTaGAAGGTCAAATTTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WLQSPQRMVGSPHCFSSHLGSGP*KVKFFS Trigger: TGAGAAAAATTTGACCTTTCAAGGACCACTACCTAA...GTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGCCCCTGTGTGAAATTTaGGCAATGAAGGGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRPLCEI*AMKGGA Trigger: AGCTCCTCCCTTCATTGCTCAAATTTCACACAGGGG...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCCCTATGTTTTGCAGTGGATaGATCATGGCGTTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGHMLAGSYSMRGLSHCPMFCSG*IMAFQR Trigger: CCTTTGGAACGCCATGATCCATCCACTGCAAAACAT...AGGGCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCATGTTTTGCAGTGGATaGATCATGGCGTTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WRGHMLAGSYSMRGLSHCMFCSG*IMAFQR Trigger: CCTTTGGAACGCCATGATCCATCCACTGCAAAACAT...GCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCAAGTCATGTTTTGCAGTaGATGGATCATGGCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAPREWWEVLIASVPTFSSHVLQ*MDHGVP Trigger: TGGAACGCCATGATCCATCCACTGCAAAACATGACT...TGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| 3UTR CAA 72 bp | CTGAGTGCAGTAACCCATGCCTTTAATCTGAGTACTTaGGAGGTAGAGGGAGCTGAATTCAAGGCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAVTHAFNLST*EVEGAEFKAIL Trigger: CAGGATGGCCTTGAATTCAGCTCCCTCTACCTCCAAAGTACTCAGATTAAAGGCATGGGTTACTGCACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GACAGGCAGGTAGATTTTACTTTTTCTCAGGAGCTGGTGGTTCCTAGGTTTGTGATCCAACTCCTCCTCTaGTTGGATGAGGGAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DRQVDFTFSQELVVPRFVIQLLL*LDEGDR Trigger: TCTGTCTCCCTCATCCAATCAGAGGAGGAGTTGGAT...CACAAACCTAGGAACCACCAGCTCCTGAGAAAAAGTAAAATCTACCTGCCTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCAGATGCAGAGAGAGCATTAGAAGATAAATGCAGGCTAGAACACCTCAGACCGCAGACATGTAAGTaGAATTTCCATGGCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPDAERALEDKCRLEHLRPQTCK*NFHGPS Trigger: ACTTGGGCCATGGAAATTTCACTTACATGTCTGCGG...TCTGAGGTGTTCTAGCCTGCATTTATCTTCTAATGCTCTCTCTGCATCTGGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTTAGATTGCTGTCTTGCTATGACGGCATAATGGGAGGGAGTTCTTGGATCCCAAAGTCTGCAGTTTaGTGCCAACGGATCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLRLLSCYDGIMGGSSWIPKSAV*CQRISG Trigger: TCCAGAGATCCGTTGGCATCAAACTGCAGACTTTGG...GATCCAAGAACTCCCTCCCATTATGCCGTCATAGCAAGACAGCAATCTAAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | CACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCTTAGGTAGTGGTCCTTaGAAGGTCAAATTTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTKHQPPQPLKSLAGPRVLGSGP*KVKFFS Trigger: TGAGAAAAATTTGACCTTTCAAGGACCACTACCTAA...GACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCAGATGCAGAGAGAGCATTAGAAGATAAATGCAGGCTAGAACACCTCAGATTCATGATGGTTTCCTaGCCTTGGCACAAGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GPDAERALEDKCRLEHLRFMMVS*PWHKVT Trigger: AGTGACCTTGTGCCAAGGTCAGGAAACCATCATGAA...TCTGAGGTGTTCTAGCCTGCATTTATCTTCTAATGCTCTCTCTGCATCTGGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGAGCTGGAAGCCATTTaGAATGACGGTCACTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRELEAI*NDGHYN Trigger: GTTGTAGTGACCGTCATTGCAAATGGCTTCCAGCTC...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGAACTCCTCCTCTGATTaGATGAGGGAGACAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRNSSSD*MRETEK Trigger: CTTCTCTGTCTCCCTCATCCAATCAGAGGAGGAGTT...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCACTGGACAAACCCAAATaGAAAGAAACGATCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAPREWWEVLIASVPTFSLDKPK*KETICL Trigger: CAGACAGATCGTTTCTTTCCATTTGGGTTTGTCCAG...TGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAGGGTTTAGGATTAACAAGTTGAGTCCGTGGCAGCTGCTGATTCATGACTGCACCTGGATTTCCTaGTCATATGTGAGGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRGFRINKLSPWQLLIHDCTWIS*SYVRLS Trigger: GCTCAACCTCACATATGACCAGGAAATCCAGGTGCA...GTCATGAATCAGCAGCTGCCACGGACTCAACTTGTTAATCCTAAACCCTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATGTGGTGCGCTGATGTACAATGAAGGGAGGAGCTaGCAACATACTGCTGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VAEYMLYVPVIGCGALMYNEGRS*QHTAGV Trigger: CACACCAGCAGTATGTTGCCAGCTCCTCCCTTCATT...GTACATCAGCGCACCACATCCAATAACTGGTACATACAGCATATACTCTGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAACAAGCCGGGCCAATGTTCAGCAGGGCACTGTTTCTCCTTCAGTTAAAACATGGACTCTCAGGGTaGAATTCATTGTCCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKQAGPMFSRALFLLQLKHGLSG*NSLSPK Trigger: CTTTGGGGACAATGAATTTCACCCTGAGAGTCCATG...TTTTAACTGAAGGAGAAACAGTGCCCTGCTGAACATTGGCCCGGCTTGTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGCTTCAGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCTGTGCACAGCCTCCTCTGATTGGATaGGGGAGACAGAGAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLQFPLSHIKEQKSCAQPPLIG*GRQRRC Trigger: GCATCTTCTCTGTCTCCCTCATCCAATCAGAGGAGG...CTGTGCACAGCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACTGAAGCAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCATCCAACTCCTCCTCTaGTTGGATGAGGGAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKSSLLQFPLSHIKEQKSIQLLL*LDEGDR Trigger: TCTGTCTCCCTCATCCAATCAGAGGAGGAGTTGGAT...GCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAACAAGCCGGGCCAATGTTCAGCAGGGCACTGTTTCTCCTTCAGTTAAAACCGCAGACATGTAAGTaGAATTTCCATGGCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TKQAGPMFSRALFLLQLKPQTCK*NFHGPS Trigger: ACTTGGGCCATGGAAATTTCACTTACATGTCTGCGG...TTTTAACTGAAGGAGAAACAGTGCCCTGCTGAACATTGGCCCGGCTTGTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GACAGGCAGGTAGATTTTACTTTTTCTCAGGAGCTGGTGGTTCCTAGGTTTGTGGTGAAATTTGAGCAATaGAGGGAGGAGCTGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: DRQVDFTFSQELVVPRFVVKFEQ*REELAT Trigger: TGTTGCCAGCTCCTCCCTTCATTGCTCAAATTTCAC...CACAAACCTAGGAACCACCAGCTCCTGAGAAAAAGTAAAATCTACCTGCCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGATGCAGAGAGAGCATTAGAAGATAAATGCAGGCTAGAACACCTCAGATGTGAAACAGTCATCTaGATGTTACTCTGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GPDAERALEDKCRLEHLRCETVI*MLLCPL Trigger: CAGTGGGCAGAGTAACATGCAGATGACTGTTTCACA...TCTGAGGTGTTCTAGCCTGCATTTATCTTCTAATGCTCTCTCTGCATCTGGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGTGTGAAACAGTCATCTaGATGTTACTCTGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRCETVI*MLLCPL Trigger: CAGTGGGCAGAGTAACATGCAGATGACTGTTTCACA...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGATTTTTCTCACCATATaGCACAGCTCGAGCACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRIFLTI*HSSSTQ Trigger: TTGGGTGCTCGAGCTGTGGCATATGGTGAGAAAAAT...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCTTGTTATCTTGCATTTaGACCTGGATTTCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WRGHMLAGSYSMRGLSHCLLSCI*TWISWS Trigger: TGACCAGGAAATCCAGGTGCAAATGCAAGATAACAA...GCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGAGTCATGTTTTGCAGTaGATGGATCATGGCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRSHVLQ*MDHGVP Trigger: TGGAACGCCATGATCCATCCACTGCAAAACATGACT...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCCCTATGTATGAAGACAGCTaGACAAACCCAAATGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGHMLAGSYSMRGLSHCPMYEDS*TNPNGK Trigger: CTTTCCATTTGGGTTTGTCCAGCTGTCTTCATACAT...AGGGCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGAGTGTTAACAGGAGCTaGAAGCCATTTGCAATGACG | + |
|
Preference number: 4 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRSVNRS*KPFAMT Trigger: CGTCATTGCAAATGGCTTCCAGCTCCTGTTAACACT...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGCGTTAAAGATCTGTaGAACAGTCATCTGCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRGVKDL*NSHLHV Trigger: AACATGCAGATGACTGTTTCACAGATCTTTAACGCC...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | AAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAACTAAAGGATTTGCCCGGTGGGCTTGGACCATaGCAGGTCAACCTCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KNSSHLLKSCIPKLKDLPGGLGP*QVNLSK Trigger: CTTACTGAGGTTGACCTGTCATGGTCCAAGCCCACC...GGGCAAATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATGTGGTGCGCTGATGTACAACCCTAAAAGGACATaGGGACTCCTCACTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: VAEYMLYVPVIGCGALMYNPKRT*GLLTVT Trigger: TGTAACAGTGAGGAGTCCTCATGTCCTTTTAGGGTT...GTACATCAGCGCACCACATCCAATAACTGGTACATACAGCATATACTCTGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTATCCCATTGCCCTAAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCCCAAAGTCTGCAGTTTaGTGCCAACGGATCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLSHCPKNSSHLLKSCIPPKSAV*CQRISG Trigger: TCCAGAGATCCGTTGGCATCAAACTGCAGACTTTGG...GGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTTAGGGCAATGGGATAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | ATCACCTGTAGGTCTATAAGCATGTTCTGTAACTTTCAGCCTAACTTCTTCCTTGGGAGACAGAGAAGATaGGCACAGACTGGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITCRSISMFCNFQPNFFLGRQRR*AQTGRQ Trigger: CTGCCTACCAGTCTGTGCGCATCTTCTCTGTCTCCC...AAGGAAGAAGTTAGGCTGAAAGTTACAGAACATGCTTATAGACCTACAGGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCAACTCCTCCTCTGATTaGATGAGGGAGACAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKSSLLQFPLSHIKEQKSNSSSD*MRETEK Trigger: CTTCTCTGTCTCCCTCATCCAATCAGAGGAGGAGTT...GCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGAGCATTGTTTTACAGAAGGAAACACATGGAAACTTGCATAGCCGTTTTCCAAGTTTCCTGCGGTaGGCTTGGACCATGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DKSIVLQKETHGNLHSRFPSFLR*AWTMTG Trigger: ACCTGTCATGGTCCAAGCCCACCGCAGGAAACTTGG...AAAACGGCTATGCAAGTTTCCATGTGTTTCCTTCTGTAAAACAATGCTCTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAACTAAAGGATTTGCCCCCAAGTTTCCTGCGGTaGGCTTGGACCATGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KNSSHLLKSCIPKLKDLPPSFLR*AWTMTG Trigger: ACCTGTCATGGTCCAAGCCCACCGCAGGAAACTTGG...GGGCAAATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGCAGGTAGATTTTACTTTTTCTCAGGAGCTGGTGGTTCCTAGGTTTGTGAGTGTTAACAGGAGCTaGAAGCCATTTGCAATGACG | + |
|
Preference number: 4 (lower is better) Translates to: DRQVDFTFSQELVVPRFVSVNRS*KPFAMT Trigger: CGTCATTGCAAATGGCTTCCAGCTCCTGTTAACACT...CACAAACCTAGGAACCACCAGCTCCTGAGAAAAAGTAAAATCTACCTGCCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAACAAGCCGGGCCAATGTTCAGCAGGGCACTGTTTCTCCTTCAGTTAAAAGGCGTTAAAGATCTGTaGAACAGTCATCTGCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKQAGPMFSRALFLLQLKGVKDL*NSHLHV Trigger: AACATGCAGATGACTGTTTCACAGATCTTTAACGCC...TTTTAACTGAAGGAGAAACAGTGCCCTGCTGAACATTGGCCCGGCTTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTATCCCATTGCCCTAAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCGATACTTCCAAAGGGTaGGTCTCTATCACAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLSHCPKNSSHLLKSCIPDTSKG*VSITEV Trigger: GACCTCTGTGATAGAGACTCACCCTTTGGAAGTATC...GGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTTAGGGCAATGGGATAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATGTGGTGCGCTGATGTACTGCCAAGACAAGCATTaGGATCCAAAATCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAEYMLYVPVIGCGALMYCQDKH*DPKSES Trigger: AGACTCTGATTTTGGATCTCAATGCTTGTCTTGGCA...GTACATCAGCGCACCACATCCAATAACTGGTACATACAGCATATACTCTGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAACAAGCCGGGCCAATGTTCAGCAGGGCACTGTTTCTCCTTCAGTTAAAATGCCAAGACAAGCATTaGGATCCAAAATCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TKQAGPMFSRALFLLQLKCQDKH*DPKSES Trigger: AGACTCTGATTTTGGATCTCAATGCTTGTCTTGGCA...TTTTAACTGAAGGAGAAACAGTGCCCTGCTGAACATTGGCCCGGCTTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTATCCCATTGCCCTAAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCGTCCCCAAAGTCTGTTaGGCCATCACTTCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLSHCPKNSSHLLKSCIPVPKVC*AITSKG Trigger: ACCTTTTGAAGTGATGGCGCAACAGACTTTGGGGAC...GGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTTAGGGCAATGGGATAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTATCCCATTGCCCTAAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCATCTGCATGTTACTCTaGCCACTGCAAAGCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GLSHCPKNSSHLLKSCIPICMLL*PLQSQT Trigger: TGTCTGGCTTTGCAGTGGGCAGAGTAACATGCAGAT...GGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTTAGGGCAATGGGATAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTATCCCATTGCCCTAAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCGACATGGCCAAAGTCTaGAGTTTGATGCCAACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLSHCPKNSSHLLKSCIPDMAKV*SLMPTD Trigger: ATCCGTTGGCATCAAACTGCAGACTTTGGCCATGTC...GGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTTAGGGCAATGGGATAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | TGGCAGTTTCGGTTATTTGTTTCTTCTTGTAGTCGGGATATGATCATTTTTGTTGGTGGGCTTGGACCATaGCAGGTCAACCTCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: WQFRLFVSSCSRDMIIFVGGLGP*QVNLSK Trigger: CTTACTGAGGTTGACCTGTCATGGTCCAAGCCCACC...AACAAAAATGATCATATCCCGACTACAAGAAGAAACAAATAACCGAAACTGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| CDS-3UTR GCA 90 bp | ATTAACACATGTACTAATGTGGCAGAGTATATGCTGTATGTACCAGTTATTGGAGGGAGACAGAGAAGATaGGCACAGACTGGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: INTCTNVAEYMLYVPVIGGRQRR*AQTGRQ Trigger: CTGCCTACCAGTCTGTGCGCATCTTCTCTGTCTCCC...TCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | TCATTGCTTCAGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCTGTGCACAGTACATTCATTCCTCATaGGCTTTATCTCGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLQFPLSHIKEQKSCAQYIHSS*ALSRAD Trigger: GTCAGCCCGAGATAAAGCCCATGAGGAATGAATGTA...CTGTGCACAGCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACTGAAGCAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | TCATTGCTTCAGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCTGTGCACAGAGTGTTAACAGGAGCTaGAAGCCATTTGCAATGACG | + |
|
Preference number: 4 (lower is better) Translates to: SLLQFPLSHIKEQKSCAQSVNRS*KPFAMT Trigger: CGTCATTGCAAATGGCTTCCAGCTCCTGTTAACACT...CTGTGCACAGCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACTGAAGCAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGAGCATTGTTTTACAGAAGGAAACACATGGAAACTTGCATAGCCGTTTTATTCACAAGGCCATGTaGTCCAGGCATAGCGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: DKSIVLQKETHGNLHSRFIHKAM*SRHSEQ Trigger: CTGTTCGCTATGCCTGGACCACATGGCCTTGTGAAT...AAAACGGCTATGCAAGTTTCCATGTGTTTCCTTCTGTAAAACAATGCTCTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CCA 90 bp | AAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAACTAAAGGATTTGCCCAATGAAGGGAGGAGCTaGCAACATACTGCTGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KNSSHLLKSCIPKLKDLPNEGRS*QHTAGV Trigger: CACACCAGCAGTATGTTGCCAGCTCCTCCCTTCATT...GGGCAAATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | TTAACACATGTACTAATGTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATCCTCCTCTGATTGGATaGGGGAGACAGAGAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LTHVLMWQSICCMYQLLDPPLIG*GRQRRC Trigger: GCATCTTCTCTGTCTCCCTCATCCAATCAGAGGAGG...ATCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| CDS-3UTR GCA 90 bp | TTATCCCATTGCCCTAAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAATGTTACTCTGCCCACTaGAAAGCCAGACATCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHCPKNSSHLLKSCIPKCYSAH*KARHLQ Trigger: TTGGAGATGTCTGGCTTTGCAGTGGGCAGAGTAACA...TTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTTAGGGCAATGGGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR GCA 90 bp | GACAAGAGCATTGTTTTACAGAAGGAAACACATGGAAACTTGCATAGCCGTTTTGAGCTGGAAGCCATTTaGAATGACGGTCACTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: DKSIVLQKETHGNLHSRFELEAI*NDGHYN Trigger: GTTGTAGTGACCGTCATTGCAAATGGCTTCCAGCTC...AAAACGGCTATGCAAGTTTCCATGTGTTTCCTTCTGTAAAACAATGCTCTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CCA 90 bp | GACAAGAGCATTGTTTTACAGAAGGAAACACATGGAAACTTGCATAGCCGTTTTTGCACCTGGATTTCCTaGTCATATGTGAGGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DKSIVLQKETHGNLHSRFCTWIS*SYVRLS Trigger: GCTCAACCTCACATATGACCAGGAAATCCAGGTGCA...AAAACGGCTATGCAAGTTTCCATGTGTTTCCTTCTGTAAAACAATGCTCTTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| 3UTR CAA 72 bp | ACGTTTCATTGTGGGTGTTCCCAGGGTAAACCTCAGTaGCTTGTACTTTCAGTAATAAATATATCCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TFHCGCSQGKPQ*LVLSVINISWQ Trigger: CTGCCAGGATATATTTATTACTGAAAGTACAAGCAACTGAGGTTTACCCTGGGAACACCCACAATGAAACGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | AAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAACTAAAGGATTTGCCCAACCCTAAAAGGACATaGGGACTCCTCACTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: KNSSHLLKSCIPKLKDLPNPKRT*GLLTVT Trigger: TGTAACAGTGAGGAGTCCTCATGTCCTTTTAGGGTT...GGGCAAATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CCA 90 bp | GACAAGAGCATTGTTTTACAGAAGGAAACACATGGAAACTTGCATAGCCGTTTTAGGAGACCAACCCAATaGGATATTGCAGAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DKSIVLQKETHGNLHSRFRRPTQ*DIAECH Trigger: ATGACACTCTGCAATATCCCATTGGGTTGGTCTCCT...AAAACGGCTATGCAAGTTTCCATGTGTTTCCTTCTGTAAAACAATGCTCTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | ATCACCTGTAGGTCTATAAGCATGTTCTGTAACTTTCAGCCTAACTTCTTCCTTTACATTCATTCCTCATaGGCTTTATCTCGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ITCRSISMFCNFQPNFFLYIHSS*ALSRAD Trigger: GTCAGCCCGAGATAAAGCCCATGAGGAATGAATGTA...AAGGAAGAAGTTAGGCTGAAAGTTACAGAACATGCTTATAGACCTACAGGTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | TTATCCCATTGCCCTAAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAAAGTCATGTTTTGCAGTaGATGGATCATGGCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSHCPKNSSHLLKSCIPKSHVLQ*MDHGVP Trigger: TGGAACGCCATGATCCATCCACTGCAAAACATGACT...TTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTTAGGGCAATGGGATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | TTAACACATGTACTAATGTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATATTCACAAGGCCATGTaGTCCAGGCATAGCGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTHVLMWQSICCMYQLLDIHKAM*SRHSEQ Trigger: CTGTTCGCTATGCCTGGACCACATGGCCTTGTGAAT...ATCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| CDS-3UTR TCA 90 bp | TTAACACATGTACTAATGTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATCATGGACTCTCAGGGTaGAATTCATTGTCCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTHVLMWQSICCMYQLLDHGLSG*NSLSPK Trigger: CTTTGGGGACAATGAATTTCACCCTGAGAGTCCATG...ATCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR TCA 90 bp | TTATCCCATTGCCCTAAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAATGCCAAGACAAGCATTaGGATCCAAAATCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSHCPKNSSHLLKSCIPKCQDKH*DPKSES Trigger: AGACTCTGATTTTGGATCTCAATGCTTGTCTTGGCA...TTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTTAGGGCAATGGGATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR GCA 90 bp | GACAAGAGCATTGTTTTACAGAAGGAAACACATGGAAACTTGCATAGCCGTTTTTTCAAAGTCATGTTTTaGAGTGGATGGATCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DKSIVLQKETHGNLHSRFFKVMF*SGWIMA Trigger: CGCCATGATCCATCCACTGCAAAACATGACTTTGAA...AAAACGGCTATGCAAGTTTCCATGTGTTTCCTTCTGTAAAACAATGCTCTTGTC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR GCA 90 bp | TTATCCCATTGCCCTAAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAATTCAAAGTCATGTTTTaGAGTGGATGGATCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSHCPKNSSHLLKSCIPKFKVMF*SGWIMA Trigger: CGCCATGATCCATCCACTGCAAAACATGACTTTGAA...TTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTTAGGGCAATGGGATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAACTAAAGGATTTGCCCCTGGACAAACCCAAATaGAAAGAAACGATCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNSSHLLKSCIPKLKDLPLDKPK*KETICL Trigger: CAGACAGATCGTTTCTTTCCATTTGGGTTTGTCCAG...GGGCAAATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CCA 90 bp | ATTAACACATGTACTAATGTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATGCACCTGGATTTCCTaGTCATATGTGAGGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: INTCTNVAEYMLYVPVIGCTWIS*SYVRLS Trigger: GCTCAACCTCACATATGACCAGGAAATCCAGGTGCA...TCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR CAA 72 bp | CATCTTTTAAAGTCCTGCATACCCAAACTAAAGGATTaGCCCTTGTATAGAAGAGCGAGCACTACTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLLKSCIPKLKD*PLYRRASTTPN Trigger: ATTTGGAGTAGTGCTCGCTCTTCTATACAAGGGCAAATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR TCA 90 bp | TTAACACATGTACTAATGTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATCAGTGTCCTTCTAGATaGCCAGACTTCAATGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: LTHVLMWQSICCMYQLLDQCPSR*PDFNVR Trigger: ACGTACATTGAAGTCTGGTCATCTAGAAGGACACTG...ATCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| CDS-3UTR GCA 90 bp | GACAAGAGCATTGTTTTACAGAAGGAAACACATGGAAACTTGCATAGCCGTTTTTTGTTATCTTGCATTTaGACCTGGATTTCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DKSIVLQKETHGNLHSRFLLSCI*TWISWS Trigger: TGACCAGGAAATCCAGGTGCAAATGCAAGATAACAA...AAAACGGCTATGCAAGTTTCCATGTGTTTCCTTCTGTAAAACAATGCTCTTGTC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CCA 90 bp | TTATCCCATTGCCCTAAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAAATGTATGAAGACAGCTaGACAAACCCAAATGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHCPKNSSHLLKSCIPKMYEDS*TNPNGK Trigger: CTTTCCATTTGGGTTTGTCCAGCTGTCTTCATACAT...TTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTTAGGGCAATGGGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR TCA 90 bp | AAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAACTAAAGGATTTGCCCTTAGGTAGTGGTCCTTaGAAGGTCAAATTTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KNSSHLLKSCIPKLKDLPLGSGP*KVKFFS Trigger: TGAGAAAAATTTGACCTTTCAAGGACCACTACCTAA...GGGCAAATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CCA 90 bp | ATTAACACATGTACTAATGTGGCAGAGTATATGCTGTATGTACCAGTTATTGGACTGGACAAACCCAAATaGAAAGAAACGATCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: INTCTNVAEYMLYVPVIGLDKPK*KETICL Trigger: CAGACAGATCGTTTCTTTCCATTTGGGTTTGTCCAG...TCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| CDS-3UTR GCA 90 bp | TTAACACATGTACTAATGTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATTTGTTATCTTGCATTTaGACCTGGATTTCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTHVLMWQSICCMYQLLDLLSCI*TWISWS Trigger: TGACCAGGAAATCCAGGTGCAAATGCAAGATAACAA...ATCCAATAACTGGTACATACAGCATATACTCTGCCACATTAGTACATGTGTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| 3UTR CAA 72 bp | TTCATGACATACACAGATGCTGAAAATTCAGTATACTaGATTCTGACCCTAGTTAGGAATATCAGATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FMTYTDAENSVY*ILTLVRNIRSP Trigger: TGGTGATCTGATATTCCTAACTAGGGTCAGAATCAAGTATACTGAATTTTCAGCATCTGTGTATGTCATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
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| CDS-3UTR CAA 90 bp | CACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCTTTCCTGCGGTGGGCTaGGACCATGACAGGTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: HTKHQPPQPLKSLAGPRVFPAVG*DHDRST Trigger: GGTTGACCTGTCATGGTCCAAGCCCACCGCAGGAAA...GACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CAA 90 bp | GGCTCCAGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTGCCAAAGTCTGCAGTTaGATGCCAACGGATCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSRAPREWWEVLIASVPTAKVCS*MPTDLW Trigger: CCAGAGATCCGTTGGCATCAAACTGCAGACTTTGGC...AGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCTGGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
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| CDS TCA 90 bp | TCTGACCCTGGGAGCCGTAGTGGAAGGTCTGGCGCCAGTCTTCAATaGGTTCAGGAAACATGCAGGTGTACAGGTCCCTGTTATAATCCG | + |
|
Preference number: 5 (lower is better) Translates to: SDPGSRSGRSGASLQ*VQETCRCTGPCYNP Trigger: CGGATTATAACAGGGACCTGTACACCTGCATGTTTCCTGAACTCATTGAAGACTGGCGCCAGACCTTCCACTACGGCTCCCAGGGTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS CCA 90 bp | CCCTGGTACCACACCACCCCTTTCAAAGTCATGTTTTGCAGTGGATaGATCATGGCGTTCCAAAGGACGGAGTGTCTTGTCGGTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PWYHTTPFKVMFCSG*IMAFQRTECLVGPV Trigger: GACTGGACCGACAAGACACTCCGTCCTTTGGAACGCCATGATCCATCCACTGCAAAACATGACTTTGAAAGGGGTGGTGTGGTACCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CAA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCAAGGTTGAGCAGGCCATaGGAAGCCAAGAGTTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: HKAPASTAFKVPCWSESPRLSRP*EAKSSI Trigger: GATAGAACTCTTGGCTTCCAATGGCCTGCTCAACCT...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS CCA 90 bp | AGACTTCAATGTACGTCCCACCCCAACTGGAGGAGACCAACCCAATaGGATATTGCAGAGTGTCATACAGGTAACGCCCAAAGAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLQCTSHPNWRRPTQ*DIAECHTGNAQRAS Trigger: GCTGGCTCTTTGGGCGTTACCTGTATGACACTCTGCAATATCCCATTGGGTTGGTCTCCTCCAGTTGGGGTGGGACGTACATTGAAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CAA 90 bp | AGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCCCTGCCAAAGTCTGCAGTTaGATGCCAACGGATCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RGHMLAGSYSMRGLSHCPAKVCS*MPTDLW Trigger: CCAGAGATCCGTTGGCATCAAACTGCAGACTTTGGC...AGGGCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CAA 90 bp | TGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCGATGGTTTCCTGACCTaGGCACAAGGTCACTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: WRGHMLAGSYSMRGLSHCDGFLT*AQGHCH Trigger: GTGACAGTGACCTTGTGCCAAGGTCAGGAAACCATC...GCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS CCA 90 bp | ACCACACCACCCCTTTCAAAGTCATGTTTTGCAGTGGATGGATCATaGCGTTCCAAAGGACGGAGTGTCTTGTCGGTCCAGTCACACGAA | + |
|
Preference number: 5 (lower is better) Translates to: TTPPLSKSCFAVDGS*RSKGRSVLSVQSHE Trigger: TTCGTGTGACTGGACCGACAAGACACTCCGTCCTTTGGAACGCCATGATCCATCCACTGCAAAACATGACTTTGAAAGGGGTGGTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CAA 90 bp | AGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCCCTTGTCCCCAAAGTCTGTaGCGCCATCACTTCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGHMLAGSYSMRGLSHCPCPQSL*RHHFKR Trigger: CCTTTTGAAGTGATGGCGCAACAGACTTTGGGGACA...AGGGCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CAA 90 bp | TGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCTGTCCCCAAAGTCTGTaGCGCCATCACTTCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WRGHMLAGSYSMRGLSHCCPQSL*RHHFKR Trigger: CCTTTTGAAGTGATGGCGCAACAGACTTTGGGGACA...GCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS-3UTR CAA 90 bp | GTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATGTGGTGCGCTGATGTACTTTCCTGCGGTGGGCTaGGACCATGACAGGTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: VAEYMLYVPVIGCGALMYFPAVG*DHDRST Trigger: GGTTGACCTGTCATGGTCCAAGCCCACCGCAGGAAA...GTACATCAGCGCACCACATCCAATAACTGGTACATACAGCATATACTCTGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCAGGTTGAGCAGGCCATaGGAAGCCAAGAGTTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: WRGHMLAGSYSMRGLSHCRLSRP*EAKSSI Trigger: GATAGAACTCTTGGCTTCCAATGGCCTGCTCAACCT...GCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCCCCCAGAGAATGGTGGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCAAGGTTGAGCAGGCCATaGGAAGCCAAGAGTTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: RAPREWWEVLIASVPTFSRLSRP*EAKSSI Trigger: GATAGAACTCTTGGCTTCCAATGGCCTGCTCAACCT...TGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCCACCATTCTCTGGGGGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS TCA 90 bp | ATCCCTTGTATTAGGGACTCCACAGGCTTTCAGTGTCCTTCTAGATaGCCAGACTTCAATGTACGTCCCACCCCAACTGGAGGAGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: IPCIRDSTGFQCPSR*PDFNVRPTPTGGDQ Trigger: TTGGTCTCCTCCAGTTGGGGTGGGACGTACATTGAAGTCTGGTCATCTAGAAGGACACTGAAAGCCTGTGGAGTCCCTAATACAAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS TCA 90 bp | TTGGAGGGTTCTTTCACACTGGTCACTTTCTTCATGATGGTTTCCTaGCCTTGGCACAAGGTCACTGTCACTGTGGCTCCAGGTGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: LEGSFTLVTFFMMVS*PWHKVTVTVAPGVP Trigger: TGGTACACCTGGAGCCACAGTGACAGTGACCTTGTGCCAAGGTCAGGAAACCATCATGAAGAAAGTGACCAGTGTGAAAGAACCCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213126.2 ENSMUST00000215474.2 ENSMUST00000215829.2 |
||
| CDS-3UTR CAA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCAGTGGTAAACAGCACATaGCTTATATTCACAAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HKAPASTAFKVPCWSESPVVNST*LIFTRP Trigger: TGGCCTTGTGAATATAAGCAATGTGCTGTTTACCAC...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | CACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCGTGGTAAACAGCACATaGCTTATATTCACAAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HTKHQPPQPLKSLAGPRVVVNST*LIFTRP Trigger: TGGCCTTGTGAATATAAGCAATGTGCTGTTTACCAC...GACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CCA 90 bp | TGCTGGTGTGGTAAACAGCACATTGCTTATATTCACAAGGCCATGTaGTCCAGGCATAGCGAACAGCAACCACTGTGCCAAGACAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CWCGKQHIAYIHKAM*SRHSEQQPLCQDKH Trigger: ATGCTTGTCTTGGCACAGTGGTTGCTGTTCGCTATGCCTGGACCACATGGCCTTGTGAATATAAGCAATGTGCTGTTTACCACACCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGTGTCCCCAAAGTCTGTaGCGCCATCACTTCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRCPQSL*RHHFKR Trigger: CCTTTTGAAGTGATGGCGCAACAGACTTTGGGGACA...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | AGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGGGTTTATCCCATTGCCCTCAACCCAATGGGATATaGCAGAGTGTCATACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RGHMLAGSYSMRGLSHCPQPNGI*QSVIQV Trigger: TACCTGTATGACACTCTGCAATATCCCATTGGGTTG...AGGGCAATGGGATAAACCCCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAACAAGCCGGGCCAATGTTCAGCAGGGCACTGTTTCTCCTTCAGTTAAAAGATGGTTTCCTGACCTaGGCACAAGGTCACTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TKQAGPMFSRALFLLQLKDGFLT*AQGHCH Trigger: GTGACAGTGACCTTGTGCCAAGGTCAGGAAACCATC...TTTTAACTGAAGGAGAAACAGTGCCCTGCTGAACATTGGCCCGGCTTGTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215474.2 |
||
| CDS TCA 90 bp | GACTCCTCACTGTTACATTCATTCCTCATGGGCTTTATCTCGGGCTaGCCAACTCTTTCATCCCTTGTATTAGGGACTCCACAGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DSSLLHSFLMGFISG*PTLSSLVLGTPQAF Trigger: GAAAGCCTGTGGAGTCCCTAATACAAGGGATGAAAGAGTTGGTCAGCCCGAGATAAAGCCCATGAGGAATGAATGTAACAGTGAGGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS TCA 90 bp | TGTCGGTCCAGTCACACGAACAGATGGGACAACCCTAAAAGGACATaGGGACTCCTCACTGTTACATTCATTCCTCATGGGCTTTATCTC | + |
|
Preference number: 5 (lower is better) Translates to: CRSSHTNRWDNPKRT*GLLTVTFIPHGLYL Trigger: GAGATAAAGCCCATGAGGAATGAATGTAACAGTGAGGAGTCCTCATGTCCTTTTAGGGTTGTCCCATCTGTTCGTGTGACTGGACCGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CCA 90 bp | TTACTCTGCCCACTGCAAAGCCAGACATCTCCAAATAAGACATCATaGACTCTCAGGGTGAAATTCATTGTCCCCAAAGTCTGTTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLCPLQSQTSPNKTS*TLRVKFIVPKVCCA Trigger: GGCGCAACAGACTTTGGGGACAATGAATTTCACCCTGAGAGTCCATGATGTCTTATTTGGAGATGTCTGGCTTTGCAGTGGGCAGAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 ENSMUST00000215829.2 |
||
| CDS-3UTR CAA 90 bp | CACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCCAGAGATCTCAAATGTTTaGTTATCTTGCATTTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: HKAPASTAFKVPCWSESPEISNV*LSCICT Trigger: GGTGCAAATGCAAGATAACAAAACATTTGAGATCTC...TGGACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | CACACAAAGCACCAGCCTCCACAGCCTTTAAAGTCCCTTGCTGGTCCGAGAGTCGAGATCTCAAATGTTTaGTTATCTTGCATTTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: HTKHQPPQPLKSLAGPRVEISNV*LSCICT Trigger: GGTGCAAATGCAAGATAACAAAACATTTGAGATCTC...GACTCTCGGACCAGCAAGGGACTTTAAAGGCTGTGGAGGCTGGTGCTTTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS TCA 90 bp | AGGCCATTGGAAGCCAAGAGTTCTATCTTCTTAGGTAGTGGTCCTTaGAAGGTCAAATTTTTCTCACCATATGCCACAGCTCGAGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: RPLEAKSSIFLGSGP*KVKFFSPYATARAP Trigger: GGGTGCTCGAGCTGTGGCATATGGTGAGAAAAATTTGACCTTTCAAGGACCACTACCTAAGAAGATAGAACTCTTGGCTTCCAATGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000213964.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCAGATGCAGAGAGAGCATTAGAAGATAAATGCAGGCTAGAACACCTCAGACAACCCAATGGGATATaGCAGAGTGTCATACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GPDAERALEDKCRLEHLRQPNGI*QSVIQV Trigger: TACCTGTATGACACTCTGCAATATCCCATTGGGTTG...TCTGAGGTGTTCTAGCCTGCATTTATCTTCTAATGCTCTCTCTGCATCTGGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | CTTATGTCAGAATACTGGAGGGGCCATATGCTAGCTGGGAGCTATTCAATGAGGCAACCCAATGGGATATaGCAGAGTGTCATACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LMSEYWRGHMLAGSYSMRQPNGI*QSVIQV Trigger: TACCTGTATGACACTCTGCAATATCCCATTGGGTTG...CCTCATTGAATAGCTCCCAGCTAGCATATGGCCCCTCCAGTATTCTGACATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS GCA 90 bp | TCGGACAACTCCTTTGAGGCGTTAAAGATCTGTGAAACAGTCATCTaGATGTTACTCTGCCCACTGCAAAGCCAGACATCTCCAAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: SDNSFEALKICETVI*MLLCPLQSQTSPNK Trigger: CTTATTTGGAGATGTCTGGCTTTGCAGTGGGCAGAGTAACATGCAGATGACTGTTTCACAGATCTTTAACGCCTCAAAGGAGTTGTCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 ENSMUST00000215829.2 |
||
| CDS CCA 90 bp | CCTGCTATTCTCACCTCAAATGTTTTGTTATCTTGCATTTGCACCTaGATTTCCTGGTCATATGTGAGGTTGAGCAGGCCATTGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAILTSNVLLSCICT*ISWSYVRLSRPLEA Trigger: GGCTTCCAATGGCCTGCTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATTTGAGGTGAGAATAGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213964.2 |
||
| CDS TCA 90 bp | TGCAAAGCCAGACATCTCCAAATAAGACATCATGGACTCTCAGGGTaGAATTCATTGTCCCCAAAGTCTGTTGCGCCATCACTTCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CKARHLQIRHHGLSG*NSLSPKSVAPSLQK Trigger: CTTTTGAAGTGATGGCGCAACAGACTTTGGGGACAATGAATTTCACCCTGAGAGTCCATGATGTCTTATTTGGAGATGTCTGGCTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 ENSMUST00000215829.2 |
||
| CDS CCA 90 bp | CTCACCTCAAATGTTTTGTTATCTTGCATTTGCACCTGGATTTCCTaGTCATATGTGAGGTTGAGCAGGCCATTGGAAGCCAAGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTSNVLLSCICTWIS*SYVRLSRPLEAKSS Trigger: AGAACTCTTGGCTTCCAATGGCCTGCTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATTTGAGGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213964.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGAGTATATGCTGTATGTACCAGTTATTGGATGTGGTGCGCTGATGTACTTTCAAAGTCATGTTTaGCAGTGGATGGATCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VAEYMLYVPVIGCGALMYFQSHV*QWMDHG Trigger: GCCATGATCCATCCACTGCAAAACATGACTTTGAAA...GTACATCAGCGCACCACATCCAATAACTGGTACATACAGCATATACTCTGCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | AAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAACTAAAGGATTTGCCCGCCAAAGTCTGCAGTTaGATGCCAACGGATCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KNSSHLLKSCIPKLKDLPAKVCS*MPTDLW Trigger: CCAGAGATCCGTTGGCATCAAACTGCAGACTTTGGC...GGGCAAATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS GCA 90 bp | TTTGAGGCGTTAAAGATCTGTGAAACAGTCATCTGCATGTTACTCTaGCCACTGCAAAGCCAGACATCTCCAAATAAGACATCATGGACT | + |
|
Preference number: 5 (lower is better) Translates to: FEALKICETVICMLL*PLQSQTSPNKTSWT Trigger: AGTCCATGATGTCTTATTTGGAGATGTCTGGCTTTGCAGTGGGCAGAGTAACATGCAGATGACTGTTTCACAGATCTTTAACGCCTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 ENSMUST00000215829.2 |
||
| CDS GCA 90 bp | TTTCCTCCTGCTATTCTCACCTCAAATGTTTTGTTATCTTGCATTTaGACCTGGATTTCCTGGTCATATGTGAGGTTGAGCAGGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: FPPAILTSNVLLSCI*TWISWSYVRLSRPL Trigger: CAATGGCCTGCTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATTTGAGGTGAGAATAGCAGGAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213964.2 |
||
| CDS CCA 90 bp | GAGATCTCAAATGTTTTGTTATCTTGCATTTGCACCTGGATTTCCTaGTCATATGTGAGGTTGAGCAGGCCATTGGAAGCCAAGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EISNVLLSCICTWIS*SYVRLSRPLEAKSS Trigger: AGAACTCTTGGCTTCCAATGGCCTGCTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATTTGAGATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCAGATGCAGAGAGAGCATTAGAAGATAAATGCAGGCTAGAACACCTCAGAGAGATCTCAAATGTTTaGTTATCTTGCATTTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GPDAERALEDKCRLEHLREISNV*LSCICT Trigger: GGTGCAAATGCAAGATAACAAAACATTTGAGATCTC...TCTGAGGTGTTCTAGCCTGCATTTATCTTCTAATGCTCTCTCTGCATCTGGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAGTCCTCATTGCTTCAGTTCCCACTTTCTCACATCAAAGAACAAAAGAGCGTGGTAAACAGCACATaGCTTATATTCACAAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GKSSLLQFPLSHIKEQKSVVNST*LIFTRP Trigger: TGGCCTTGTGAATATAAGCAATGTGCTGTTTACCAC...GCTCTTTTGTTCTTTGATGTGAGAAAGTGGGAACTGAAGCAATGAGGACTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | AAAAACAGCAGTCATCTTTTAAAGTCCTGCATACCCAAACTAAAGGATTTGCCCTTTCAAAGTCATGTTTaGCAGTGGATGGATCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: KNSSHLLKSCIPKLKDLPFQSHV*QWMDHG Trigger: GCCATGATCCATCCACTGCAAAACATGACTTTGAAA...GGGCAAATCCTTTAGTTTGGGTATGCAGGACTTTAAAAGATGACTGCTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS-3UTR CAA 90 bp | ATCACCTGTAGGTCTATAAGCATGTTCTGTAACTTTCAGCCTAACTTCTTCCTTTTTCAAAGTCATGTTTaGCAGTGGATGGATCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: ITCRSISMFCNFQPNFFLFQSHV*QWMDHG Trigger: GCCATGATCCATCCACTGCAAAACATGACTTTGAAA...AAGGAAGAAGTTAGGCTGAAAGTTACAGAACATGCTTATAGACCTACAGGTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002007.5 ENSMUST00000215474.2 |
||
| CDS TCA 72 bp | TCCATGGCCCAAGTTTCCTGCGGTGGGCTTGGACCATaGCAGGTCAACCTCAGTAAGGTCATCCAACTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SMAQVSCGGLGP*QVNLSKVIQLL Trigger: GAGGAGTTGGATGACCTTACTGAGGTTGACCTGTCATGGTCCAAGCCCACCGCAGGAAACTTGGGCCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS TCA 72 bp | GGGAGCCGTAGTGGAAGGTCTGGCGCCAGTCTTCAATaGGTTCAGGAAACATGCAGGTGTACAGGTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GSRSGRSGASLQ*VQETCRCTGPC Trigger: ACAGGGACCTGTACACCTGCATGTTTCCTGAACTCATTGAAGACTGGCGCCAGACCTTCCACTACGGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CAA 72 bp | GTGGATGGATCATGGCGTTCCAAAGGACGGAGTGTCTaGTCGGTCCAGTCACACGAACAGATGGGACAACCC | + |
|
Preference number: 6 (lower is better) Translates to: VDGSWRSKGRSV*SVQSHEQMGQP Trigger: GGGTTGTCCCATCTGTTCGTGTGACTGGACCGACAAGACACTCCGTCCTTTGGAACGCCATGATCCATCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CAA 90 bp | AATGTACGTCCCACCCCAACTGGAGGAGACCAACCCAATGGGATATaGCAGAGTGTCATACAGGTAACGCCCAAAGAGCCAGCACACCGC | + |
|
Preference number: 6 (lower is better) Translates to: NVRPTPTGGDQPNGI*QSVIQVTPKEPAHR Trigger: GCGGTGTGCTGGCTCTTTGGGCGTTACCTGTATGACACTCTGCAATATCCCATTGGGTTGGTCTCCTCCAGTTGGGGTGGGACGTACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CAA 72 bp | CCCACCCCAACTGGAGGAGACCAACCCAATGGGATATaGCAGAGTGTCATACAGGTAACGCCCAAAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PTPTGGDQPNGI*QSVIQVTPKEP Trigger: TGGCTCTTTGGGCGTTACCTGTATGACACTCTGCAATATCCCATTGGGTTGGTCTCCTCCAGTTGGGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CCA 72 bp | TGTACGTCCCACCCCAACTGGAGGAGACCAACCCAATaGGATATTGCAGAGTGTCATACAGGTAACGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CTSHPNWRRPTQ*DIAECHTGNAQ Trigger: TTGGGCGTTACCTGTATGACACTCTGCAATATCCCATTGGGTTGGTCTCCTCCAGTTGGGGTGGGACGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CAA 90 bp | GAAGGGAGGAGCTGGCAACATACTGCTGGTGTGGTAAACAGCACATaGCTTATATTCACAAGGCCATGTGGTCCAGGCATAGCGAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: EGRSWQHTAGVVNST*LIFTRPCGPGIANS Trigger: GCTGTTCGCTATGCCTGGACCACATGGCCTTGTGAATATAAGCAATGTGCTGTTTACCACACCAGCAGTATGTTGCCAGCTCCTCCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CCA 72 bp | CCCCTTTCAAAGTCATGTTTTGCAGTGGATGGATCATaGCGTTCCAAAGGACGGAGTGTCTTGTCGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PLSKSCFAVDGS*RSKGRSVLSVQ Trigger: CTGGACCGACAAGACACTCCGTCCTTTGGAACGCCATGATCCATCCACTGCAAAACATGACTTTGAAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS TCA 72 bp | ATTAGGGACTCCACAGGCTTTCAGTGTCCTTCTAGATaGCCAGACTTCAATGTACGTCCCACCCCAACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: IRDSTGFQCPSR*PDFNVRPTPTG Trigger: TCCAGTTGGGGTGGGACGTACATTGAAGTCTGGTCATCTAGAAGGACACTGAAAGCCTGTGGAGTCCCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CCA 72 bp | CACACCACCCCTTTCAAAGTCATGTTTTGCAGTGGATaGATCATGGCGTTCCAAAGGACGGAGTGTCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HTTPFKVMFCSG*IMAFQRTECLV Trigger: GACAAGACACTCCGTCCTTTGGAACGCCATGATCCATCCACTGCAAAACATGACTTTGAAAGGGGTGGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CCA 72 bp | GTACCACACCACCCCTTTCAAAGTCATGTTTTGCAGTaGATGGATCATGGCGTTCCAAAGGACGGAGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VPHHPFQSHVLQ*MDHGVPKDGVS Trigger: AGACACTCCGTCCTTTGGAACGCCATGATCCATCCACTGCAAAACATGACTTTGAAAGGGGTGGTGTGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CAA 72 bp | CATCTTCGGGTTGGGGACATGGCCAAAGTCTGCAGTTaGATGCCAACGGATCTCTGGAAATCCATAATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: HLRVGDMAKVCS*MPTDLWKSIIR Trigger: TCGGATTATGGATTTCCAGAGATCCGTTGGCATCAAACTGCAGACTTTGGCCATGTCCCCAACCCGAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CCA 72 bp | GACATGAGGACTCCTCACTGTTACATTCATTCCTCATaGGCTTTATCTCGGGCTGACCAACTCTTTCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: DMRTPHCYIHSS*ALSRADQLFHP Trigger: GGGATGAAAGAGTTGGTCAGCCCGAGATAAAGCCCATGAGGAATGAATGTAACAGTGAGGAGTCCTCATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CCA 72 bp | GGTAAACAGCACATTGCTTATATTCACAAGGCCATGTaGTCCAGGCATAGCGAACAGCAACCACTGTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GKQHIAYIHKAM*SRHSEQQPLCQ Trigger: TTGGCACAGTGGTTGCTGTTCGCTATGCCTGGACCACATGGCCTTGTGAATATAAGCAATGTGCTGTTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS TCA 72 bp | AGTCACACGAACAGATGGGACAACCCTAAAAGGACATaGGGACTCCTCACTGTTACATTCATTCCTCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: SHTNRWDNPKRT*GLLTVTFIPHG Trigger: CCCATGAGGAATGAATGTAACAGTGAGGAGTCCTCATGTCCTTTTAGGGTTGTCCCATCTGTTCGTGTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CCA 72 bp | GTGCCAAGACAAGCATTGAGATCCAAAATCAGAGTCTaGGTGGAGAAAGTGTTAACAGGAGCTGGAAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VPRQALRSKIRV*VEKVLTGAGSH Trigger: ATGGCTTCCAGCTCCTGTTAACACTTTCTCCACCCAGACTCTGATTTTGGATCTCAATGCTTGTCTTGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
||
| CDS CAA 72 bp | TGCATTTGCACCTGGATTTCCTGGTCATATGTGAGGTaGAGCAGGCCATTGGAAGCCAAGAGTTCTATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CICTWISWSYVR*SRPLEAKSSIF Trigger: GAAGATAGAACTCTTGGCTTCCAATGGCCTGCTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000213964.2 ENSMUST00000215474.2 |
||
| CDS CAA 72 bp | AGCTGGCAACATACTGCTGGTGTGGTAAACAGCACATaGCTTATATTCACAAGGCCATGTGGTCCAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: SWQHTAGVVNST*LIFTRPCGPGI Trigger: TATGCCTGGACCACATGGCCTTGTGAATATAAGCAATGTGCTGTTTACCACACCAGCAGTATGTTGCCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS CAA 72 bp | TGGATTTCCTGGTCATATGTGAGGTTGAGCAGGCCATaGGAAGCCAAGAGTTCTATCTTCTTAGGTAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: WISWSYVRLSRP*EAKSSIFLGSG Trigger: ACCACTACCTAAGAAGATAGAACTCTTGGCTTCCAATGGCCTGCTCAACCTCACATATGACCAGGAAATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000213964.2 ENSMUST00000215474.2 |
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| CDS TCA 72 bp | AGACATCTCCAAATAAGACATCATGGACTCTCAGGGTaGAATTCATTGTCCCCAAAGTCTGTTGCGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: RHLQIRHHGLSG*NSLSPKSVAPS Trigger: TGATGGCGCAACAGACTTTGGGGACAATGAATTTCACCCTGAGAGTCCATGATGTCTTATTTGGAGATGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 ENSMUST00000215829.2 |
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| CDS GCA 72 bp | TCTGTGAAACAGTCATCTGCATGTTACTCTGCCCACTaGAAAGCCAGACATCTCCAAATAAGACATCATGGA | + |
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Preference number: 6 (lower is better) Translates to: SVKQSSACYSAH*KARHLQIRHHG Trigger: TCCATGATGTCTTATTTGGAGATGTCTGGCTTTGCAGTGGGCAGAGTAACATGCAGATGACTGTTTCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 ENSMUST00000215829.2 |
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| CDS CCA 72 bp | AATGTTTTGTTATCTTGCATTTGCACCTGGATTTCCTaGTCATATGTGAGGTTGAGCAGGCCATTGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: NVLLSCICTWIS*SYVRLSRPLEA Trigger: GGCTTCCAATGGCCTGCTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000213964.2 ENSMUST00000215474.2 |
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| CDS CCA 72 bp | CTCACCTCAAATGTTTTGTTATCTTGCATTTGCACCTaGATTTCCTGGTCATATGTGAGGTTGAGCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LTSNVLLSCICT*ISWSYVRLSRP Trigger: TGGCCTGCTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATTTGAGGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213964.2 |
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| CDS CAA 90 bp | TTGTTATCTTGCATTTGCACCTGGATTTCCTGGTCATATGTGAGGTaGAGCAGGCCATTGGAAGCCAAGAGTTCTATCTTCTTAGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LLSCICTWISWSYVR*SRPLEAKSSIFLGS Trigger: ACTACCTAAGAAGATAGAACTCTTGGCTTCCAATGGCCTGCTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000213964.2 ENSMUST00000215474.2 |
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| CDS CAA 90 bp | ACGGTCACTACAACAGGAGATCTCAAATGTTTTGTTATCTTGCATTaGCACCTGGATTTCCTGGTCATATGTGAGGTTGAGCAGGCCATT | + |
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Preference number: 6 (lower is better) Translates to: TVTTTGDLKCFVILH*HLDFLVICEVEQAI Trigger: AATGGCCTGCTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATTTGAGATCTCCTGTTGTAGTGACCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS CAA 90 bp | CTTTCCTCCTGCTATTCTCACCTCAAATGTTTTGTTATCTTGCATTaGCACCTGGATTTCCTGGTCATATGTGAGGTTGAGCAGGCCATT | + |
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Preference number: 6 (lower is better) Translates to: LSSCYSHLKCFVILH*HLDFLVICEVEQAI Trigger: AATGGCCTGCTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATTTGAGGTGAGAATAGCAGGAGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213964.2 |
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| CDS CCA 72 bp | GAGATCTCAAATGTTTTGTTATCTTGCATTTGCACCTaGATTTCCTGGTCATATGTGAGGTTGAGCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: EISNVLLSCICT*ISWSYVRLSRP Trigger: TGGCCTGCTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATTTGAGATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS CAA 90 bp | TCAGTACCAAAAGGCTTTCCTCCTGCTATTCTCACCTCAAATGTTTaGTTATCTTGCATTTGCACCTGGATTTCCTGGTCATATGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SVPKGFPPAILTSNV*LSCICTWISWSYVR Trigger: CCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATTTGAGGTGAGAATAGCAGGAGGAAAGCCTTTTGGTACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213964.2 |
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| CDS TCA 72 bp | GAAGCCAAGAGTTCTATCTTCTTAGGTAGTGGTCCTTaGAAGGTCAAATTTTTCTCACCATATGCCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: EAKSSIFLGSGP*KVKFFSPYATA Trigger: AGCTGTGGCATATGGTGAGAAAAATTTGACCTTTCAAGGACCACTACCTAAGAAGATAGAACTCTTGGCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000213964.2 ENSMUST00000215474.2 |
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| CDS GCA 72 bp | TTAAAGATCTGTGAAACAGTCATCTGCATGTTACTCTaGCCACTGCAAAGCCAGACATCTCCAAATAAGACA | + |
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Preference number: 6 (lower is better) Translates to: LKICETVICMLL*PLQSQTSPNKT Trigger: TGTCTTATTTGGAGATGTCTGGCTTTGCAGTGGGCAGAGTAACATGCAGATGACTGTTTCACAGATCTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 ENSMUST00000215829.2 |
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| CDS GCA 72 bp | CAACAGGAGATCTCAAATGTTTTGTTATCTTGCATTTaGACCTGGATTTCCTGGTCATATGTGAGGTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: QQEISNVLLSCI*TWISWSYVRLS Trigger: GCTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATTTGAGATCTCCTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS GCA 72 bp | TGGAAAGAGCCTCTCAGTACCAAAAGGCTTTCCTCCTaGTATTCTCACCTCAAATGTTTTGTTATCTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: WKEPLSTKRLSS*YSHLKCFVILH Trigger: ATGCAAGATAACAAAACATTTGAGGTGAGAATAGCAGGAGGAAAGCCTTTTGGTACTGAGAGGCTCTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213964.2 |
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| CDS CAA 72 bp | ACAACAGGAGATCTCAAATGTTTTGTTATCTTGCATTaGCACCTGGATTTCCTGGTCATATGTGAGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: TTGDLKCFVILH*HLDFLVICEVE Trigger: CTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATTTGAGATCTCCTGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002007.5 ENSMUST00000213126.2 ENSMUST00000215474.2 |
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| CDS CAA 72 bp | TGCTATTCTCACCTCAAATGTTTTGTTATCTTGCATTaGCACCTGGATTTCCTGGTCATATGTGAGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: CYSHLKCFVILH*HLDFLVICEVE Trigger: CTCAACCTCACATATGACCAGGAAATCCAGGTGCAAATGCAAGATAACAAAACATTTGAGGTGAGAATAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213964.2 |
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