Pregenerated sensors for SHTN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041362Ensembl transcript IDs: ENSMUST00000047511.15, ENSMUST00000163821.3
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACACGCAGACGAGCCACGTGCTCCTTGAGAAGGCCCCACCAACCTaGCAGCCTCTGGTTTCAGATCAGCAGTTGGAACTGTCCGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: YTQTSHVLLEKAPPT*QPLVSDQQLELSVS Trigger: AGAGACGGACAGTTCCAACTGCTGATCTGAAACCAGAGGCTGGCAGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR CCA 90 bp | AGAAGGCCCCACCAACCTGCCAGCCTCTGGTTTCAGATCAGCAGTTaGAACTGTCCGTCTCTCCTGTTTTCCCACCGCTGTCTTCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: RRPHQPASLWFQISS*NCPSLLFSHRCLLC Trigger: ACAAAGAAGACAGCGGTGGGAAAACAGGAGAGACGGACAGTTCCAACTGCTGATCTGAAACCAGAGGCTGGCAGGTTGGTGGGGCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR CCA 90 bp | TGTGTGATCCAAACTAAGACTCAGGCTCACGTGATCCTCTTGCCTTaGTCTCTCCATGCCCTAGGGCTTGGATTAAAGGGTGCCTTTAAG | + |
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Preference number: 1 (lower is better) Translates to: CVIQTKTQAHVILLP*SLHALGLGLKGAFK Trigger: CTTAAAGGCACCCTTTAATCCAAGCCCTAGGGCATGGAGAGACCAAGGCAAGAGGATCACGTGAGCCTGAGTCTTAGTTTGGATCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR CCA 90 bp | ACTGTCCGTCTCTCCTGTTTTCCCACCGCTGTCTTCTTTGTATTCTaGTTGGGTTTCACCTCCCTCCTCCTCGAATTGAGTTGGGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: TVRLSCFPTAVFFVF*LGFTSLLLELSWVF Trigger: AAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAAACCCAACCAGAATACAAAGAAGACAGCGGTGGGAAAACAGGAGAGACGGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR TCA 90 bp | TCTTCTTTGTATTCTGGTTGGGTTTCACCTCCCTCCTCCTCGAATTaGGTTGGGTCTTTTTCAGCAGCCTGGTCTTTGGTTTGGGGTTCG | + |
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Preference number: 1 (lower is better) Translates to: SSLYSGWVSPPSSSN*VGSFSAAWSLVWGS Trigger: CGAACCCCAAACCAAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAAACCCAACCAGAATACAAAGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR CCA 90 bp | TTTGTATTCTGGTTGGGTTTCACCTCCCTCCTCCTCGAATTGAGTTaGGTCTTTTTCAGCAGCCTGGTCTTTGGTTTGGGGTTCGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: FVFWLGFTSLLLELS*VFFSSLVFGLGFVC Trigger: ACACACGAACCCCAAACCAAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAAACCCAACCAGAATACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR CCA 90 bp | CCTCCTCCTCGAATTGAGTTGGGTCTTTTTCAGCAGCCTGGTCTTTaGTTTGGGGTTCGTGTGTGGAAACAGGATCTAATACTACAACTG | + |
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Preference number: 1 (lower is better) Translates to: PPPRIELGLFQQPGL*FGVRVWKQDLILQL Trigger: CAGTTGTAGTATTAGATCCTGTTTCCACACACGAACCCCAAACCAAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR TCA 90 bp | AATTTGATGAGGGGTACATATGTTCCCTGTAAAGACACCAACCTCTaGGTTCCGCCACCGCCTCAGGGAAGTCATACTTCATATAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: NLMRGTYVPCKDTNL*VPPPPQGSHTSYRN Trigger: GTTTCTATATGAAGTATGACTTCCCTGAGGCGGTGGCGGAACTCAGAGGTTGGTGTCTTTACAGGGAACATATGTACCCCTCATCAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR CCA 90 bp | CGTGAGAGCTGGTGTAAAATATGGTACTTGTGGCACGTGAATGTGTaGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCG | + |
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Preference number: 1 (lower is better) Translates to: RESWCKIWYLWHVNV*ENTVNSWNRTSSLP Trigger: CGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCAGCTCTCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR TCA 90 bp | TCACTGTGCGTGAGAGCTGGTGTAAAATATGGTACTTGTGGCACGTaGATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTA | + |
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Preference number: 1 (lower is better) Translates to: SLCVRAGVKYGTCGT*MCGKTQLTHGTELV Trigger: TACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCAGCTCTCACGCACAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR CCA 90 bp | CTTATCTTCACTGTGCGTGAGAGCTGGTGTAAAATATGGTACTTGTaGCACGTGAATGTGTGGGAAAACACAGTTAACTCATGGAACAGA | + |
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Preference number: 1 (lower is better) Translates to: LIFTVRESWCKIWYL*HVNVWENTVNSWNR Trigger: TCTGTTCCATGAGTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCAGCTCTCACGCACAGTGAAGATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR CCA 90 bp | TGCTTGTCACTTATCTTCACTGTGCGTGAGAGCTGGTGTAAAATATaGTACTTGTGGCACGTGAATGTGTGGGAAAACACAGTTAACTCA | + |
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Preference number: 1 (lower is better) Translates to: CLSLIFTVRESWCKI*YLWHVNVWENTVNS Trigger: TGAGTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCAGCTCTCACGCACAGTGAAGATAAGTGACAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR CAA 90 bp | GAGAAGGCCCCACCAACCTGCCAGCCTCTGGTTTCAGATCAGCAGTaGGAACTGTCCGTCTCTCCTGTTTTCCCACCGCTGTCTTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: EKAPPTCQPLVSDQQ*ELSVSPVFPPLSSL Trigger: CAAAGAAGACAGCGGTGGGAAAACAGGAGAGACGGACAGTTCCAACTGCTGATCTGAAACCAGAGGCTGGCAGGTTGGTGGGGCCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR-3UTR TCA 90 bp | GCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTTCCCATCAGAAGACCAGAAAAGACACCAACCTCTaGGTTCCGCCACCGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: AIGPTDVEAAAVSHQKTRKDTNL*VPPPPQ Trigger: CTGAGGCGGTGGCGGAACTCAGAGGTTGGTGTCTTT...TCTGGTCTTCTGATGGGAAACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR GCA 90 bp | ACCGCTGTCTTCTTTGTATTCTGGTTGGGTTTCACCTCCCTCCTCCTCGAATTGCGCAGACGAGCCACGTaGTCCTTGAGAAGGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: TAVFFVFWLGFTSLLLELRRRAT*SLRRPH Trigger: GTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCG...CAATTCGAGGAGGAGGGAGGTGAAACCCAACCAGAATACAAAGAAGACAGCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR CAA 90 bp | CAGACAGGGAAAACAGTCAAGCCCATTGACCCTACAGAAAGAGAATaGTCCCCAAGCCGAGGAAGTGTCCTCACCTGCCTTCCCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: QTGKTVKPIDPTERE*SPSRGSVLTCLPTS Trigger: GGAGGTGGGAAGGCAGGTGAGGACACTTCCTCGGCTTGGGGACAATTCTCTTTCTGTAGGGTCAATGGGCTTGACTGTTTTCCCTGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR GCA 90 bp | AATTGTTATCATTTTCTTTTGCCCTCAGGTGCAGAGCACCTGACAGCTACATGCCGCAGACGAGCCACGTaGTCCTTGAGAAGGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: NCYHFLLPSGAEHLTATCRRRAT*SLRRPH Trigger: GTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCG...GCATGTAGCTGTCAGGTGCTCTGCACCTGAGGGCAAAAGAAAATGATAACAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCTTCAAAACAGAGACGCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTCAACCTGCCAGCCTCTaGTTTCAGATCAGCAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: TLQNRDAIGPTDVEAAAVQPASL*FQISSW Trigger: CCAACTGCTGATCTGAAACCAGAGGCTGGCAGGTTG...AACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGCGTCTCTGTTTTGAAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR CAA 90 bp | GTCCGTCTCTCCTGTTTTCCCACCGCTGTCTTCTTTGTATTCTGGTaGGGTTTCACCTCCCTCCTCCTCGAATTGAGTTGGGTCTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: VRLSCFPTAVFFVFW*GFTSLLLELSWVFF Trigger: GAAAAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAAACCCAACCAGAATACAAAGAAGACAGCGGTGGGAAAACAGGAGAGACGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTAACAAAACTAAGCGCCTTGGTCTCTCCATaGCCTAGGGCTTGGATTAAA | + |
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Preference number: 2 (lower is better) Translates to: SGAEHLTATCRVMLTKLSALVSP*PRAWIK Trigger: TTTAATCCAAGCCCTAGGGCATGGAGAGACCAAGGC...GCTTAGTTTTGTTAGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR GCA 90 bp | GCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTTCCCATCAGAAGACCAGACAGCTTGGTTTTCACTaGCCACACATTTTCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: AIGPTDVEAAAVSHQKTRQLGFH*PHIFSC Trigger: ACAGGAGAAAATGTGTGGGCAGTGAAAACCAAGCTG...TCTGGTCTTCTGATGGGAAACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR CAA 90 bp | GTCTTCTTTGTATTCTGGTTGGGTTTCACCTCCCTCCTCCTCGAATaGAGTTGGGTCTTTTTCAGCAGCCTGGTCTTTGGTTTGGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: VFFVFWLGFTSLLLE*SWVFFSSLVFGLGF Trigger: GAACCCCAAACCAAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAAACCCAACCAGAATACAAAGAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR-3UTR GCA 90 bp | ATTCAAGGTTTGAGCGTCCCTCTAAGCCAATTCTCTGTTGATGCTGCCAAGACAGCCTTGGTCTCTCCATaGCCTAGGGCTTGGATTAAA | + |
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Preference number: 2 (lower is better) Translates to: IQGLSVPLSQFSVDAAKTALVSP*PRAWIK Trigger: TTTAATCCAAGCCCTAGGGCATGGAGAGACCAAGGC...TGTCTTGGCAGCATCAACAGAGAATTGGCTTAGAGGGACGCTCAAACCTTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR GCA 90 bp | GAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAATCCCTGTAAGGCCCCACCAACCTaGCAGCCTCTGGTTTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: ENTVNSWNRTSSLPRNPCKAPPT*QPLVSD Trigger: ATCTGAAACCAGAGGCTGGCAGGTTGGTGGGGCCTT...ACAGGGATTCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR-3UTR CCA 90 bp | GAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAATCCCTGTGTGATCCTCTTGCCTTaGTCTCTCCATGCCCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: ENTVNSWNRTSSLPRNPCVILLP*SLHALG Trigger: CCCTAGGGCATGGAGAGACCAAGGCAAGAGGATCAC...ACAGGGATTCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR TCA 90 bp | ACCCTTCAAAACAGAGACGCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTTTGCTACTTACAAAGTaGTACCAGCAAAGAAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TLQNRDAIGPTDVEAAAVLLLTK*YQQRSV Trigger: CACACTTCTTTGCTGGTATCACTTTGTAAGTAGCAA...AACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGCGTCTCTGTTTTGAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR TCA 90 bp | AAAAACAATGTGTGCTTGTCACTTATCTTCACTGTGCGTGAGAGCTGGTGTAAAAGACTCAGGCTCACGTaGTCCTCTTGCCTTGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: KNNVCLSLIFTVRESWCKRLRLT*SSCLGL Trigger: GAGACCAAGGCAAGAGGATCACGTGAGCCTGAGTCT...TTTACACCAGCTCTCACGCACAGTGAAGATAAGTGACAAGCACACATTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR TCA 90 bp | AAAAACAATGTGTGCTTGTCACTTATCTTCACTGTGCGTGAGAGCTGGTGTAAAAGACCTAAGAGTCCATaGTGCCACCTCCTGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: KNNVCLSLIFTVRESWCKRPKSP*CHLLSS Trigger: TGAGCTCAGGAGGTGGCATCATGGACTCTTAGGTCT...TTTACACCAGCTCTCACGCACAGTGAAGATAAGTGACAAGCACACATTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTAACAAAACTAAGCCTAAAATATGGTACTTGTaGCACGTGAATGTGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RCRAPDSYMPSHANKTKPKIWYL*HVNVWE Trigger: TTCCCACACATTCACGTGCCACAAGTACCATATTTT...AGGCTTAGTTTTGTTAGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTAACAAAACTAAGCCTTTTGGGGTTCGTGTGTaGAAACAGGATCTAATACTA | + |
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Preference number: 2 (lower is better) Translates to: RCRAPDSYMPSHANKTKPFGVRV*KQDLIL Trigger: TAGTATTAGATCCTGTTTCCACACACGAACCCCAAA...AGGCTTAGTTTTGTTAGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTACTCCTCGAATTGAGTTaGGTCTTTTTCAGCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: EDQTPETLAGLLFFICSLLLELS*VFFSSL Trigger: CAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAG...TAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR-3UTR TCA 90 bp | GGATATAAAATCAGCACTGACAGACAGGGAAAACAGTCAAGCCCATTGACCCTATGGAGTTGTACTGTGTaGTCCAAACTAAGACTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GYKISTDRQGKQSSPLTLWSCTV*SKLRLR Trigger: CCTGAGTCTTAGTTTGGATCACACAGTACAACTCCA...TAGGGTCAATGGGCTTGACTGTTTTCCCTGTCTGTCAGTGCTGATTTTATATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR GCA 90 bp | GTTCCGCCACCGCCTCAGGGAAGTCATACTTCATATAGAAACCGGAAAGAACCCCAGCTTACTTATGATTaGTACTTACAAAGTGATACC | + |
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Preference number: 2 (lower is better) Translates to: VPPPPQGSHTSYRNRKEPQLTYD*YLQSDT Trigger: GGTATCACTTTGTAAGTAGCAATCATAAGTAAGCTG...GGGTTCTTTCCGGTTTCTATATGAAGTATGACTTCCCTGAGGCGGTGGCGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR CAA 90 bp | TCACTTATCTTCACTGTGCGTGAGAGCTGGTGTAAAATATGGTACTaGTGGCACGTGAATGTGTGGGAAAACACAGTTAACTCATGGAAC | + |
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Preference number: 2 (lower is better) Translates to: SLIFTVRESWCKIWY*WHVNVWENTVNSWN Trigger: GTTCCATGAGTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCAGCTCTCACGCACAGTGAAGATAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR TCA 90 bp | ATTCAAGGTTTGAGCGTCCCTCTAAGCCAATTCTCTGTTGATGCTGCCAAGACATTGCTACTTACAAAGTaGTACCAGCAAAGAAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: IQGLSVPLSQFSVDAAKTLLLTK*YQQRSV Trigger: CACACTTCTTTGCTGGTATCACTTTGTAAGTAGCAA...TGTCTTGGCAGCATCAACAGAGAATTGGCTTAGAGGGACGCTCAAACCTTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR TCA 90 bp | GGATATAAAATCAGCACTGACAGACAGGGAAAACAGTCAAGCCCATTGACCCTATTGGACACAGGGTCATaGTTTCCACACAATAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: GYKISTDRQGKQSSPLTLLDTGS*FPHNSQ Trigger: TTGACTATTGTGTGGAAATCATGACCCTGTGTCCAA...TAGGGTCAATGGGCTTGACTGTTTTCCCTGTCTGTCAGTGCTGATTTTATATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR CCA 90 bp | GAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAATCCCTGTCAGCAAAGAAGTGTGTaGCCAGAACAAAGGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: ENTVNSWNRTSSLPRNPCQQRSV*PEQRNV Trigger: GACATTCCTTTGTTCTGGCCACACACTTCTTTGCTG...ACAGGGATTCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR CCA 90 bp | AAAAACAATGTGTGCTTGTCACTTATCTTCACTGTGCGTGAGAGCTGGTGTAAAACAACTGGCTCAGCTTaGTTTTCACTGCCCACACAT | + |
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Preference number: 2 (lower is better) Translates to: KNNVCLSLIFTVRESWCKTTGSA*FSLPTH Trigger: ATGTGTGGGCAGTGAAAACCAAGCTGAGCCAGTTGT...TTTACACCAGCTCTCACGCACAGTGAAGATAAGTGACAAGCACACATTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR-3UTR CCA 90 bp | AAAAACAATGTGTGCTTGTCACTTATCTTCACTGTGCGTGAGAGCTGGTGTAAATTTCAGATCAGCAGTTaGAACTGTCCGTCTCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: KNNVCLSLIFTVRESWCKFQISS*NCPSLL Trigger: CAGGAGAGACGGACAGTTCCAACTGCTGATCTGAAA...TTTACACCAGCTCTCACGCACAGTGAAGATAAGTGACAAGCACACATTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
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| 3UTR CAA 90 bp | AGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTATATGGAGTaGTACTGTGTGATCCAAACTAAGACTCAGGCTCACGTGATCCTC | + |
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Preference number: 2 (lower is better) Translates to: RLLRAFFSLYVLYME*YCVIQTKTQAHVIL Trigger: GAGGATCACGTGAGCCTGAGTCTTAGTTTGGATCACACAGTACAACTCCATATAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR CCA 90 bp | CATGCCCTAGGGCTTGGATTAAAGGGTGCCTTTAAGATAATTGTTAAGTTTGGTCAGCAAAGAAGTGTGTaGCCAGAACAAAGGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: HALGLGLKGAFKIIVKFGQQRSV*PEQRNV Trigger: GACATTCCTTTGTTCTGGCCACACACTTCTTTGCTG...ACCAAACTTAACAATTATCTTAAAGGCACCCTTTAATCCAAGCCCTAGGGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR CAA 90 bp | AAAAATACAATAGGATACAACTACTGCAATTGTTATCATTTTCTTTaGCCCTCAGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATG | + |
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Preference number: 2 (lower is better) Translates to: KNTIGYNYCNCYHFL*PSGAEHLTATCRVM Trigger: CATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCTGAGGGCAAAAGAAAATGATAACAATTGCAGTAGTTGTATCCTATTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR GCA 90 bp | GAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAATCCCTGTCAGCTTACTTATGATTaGTACTTACAAAGTGATACC | + |
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Preference number: 2 (lower is better) Translates to: ENTVNSWNRTSSLPRNPCQLTYD*YLQSDT Trigger: GGTATCACTTTGTAAGTAGCAATCATAAGTAAGCTG...ACAGGGATTCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR GCA 90 bp | GACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTATATGGAGTAAACTACCCAGAAGATaGATTTTGCTAAACAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: DPRDSCGPSFLYMFFIWSKLPRR*ILLNSL Trigger: TAAGCTGTTTAGCAAAATGCATCTTCTGGGTAGTTT...ACTCCATATAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAAACACAGTTAACTCATaGAACAGAACTAGTAGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: MCGKTQLTHGTELVAYRGNTVNS*NRTSSL Trigger: TAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTT...TCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAAACAATGTGTGCTTGTCACTTATCTTCACTGTGCGTGAGAGCTGGTGTAAAAACACAGTTAACTCATaGAACAGAACTAGTAGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: KNNVCLSLIFTVRESWCKNTVNS*NRTSSL Trigger: TAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTT...TTTACACCAGCTCTCACGCACAGTGAAGATAAGTGACAAGCACACATTGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR TCA 72 bp | TCCTGCCGGTTACACGCAGACGAGCCACGTGCTCCTTaGGAAGGCCCCACCAACCTGCCAGCCTCTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SCRLHADEPRAP*EGPTNLPASGF Trigger: GAAACCAGAGGCTGGCAGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCGTGTAACCGGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR GCA 72 bp | CAACAGTTCCTGCCGGTTACACGCAGACGAGCCACGTaGTCCTTGAGAAGGCCCCACCAACCTGCCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QQFLPVTRRRAT*SLRRPHQPASL Trigger: GAGGCTGGCAGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCGTGTAACCGGCAGGAACTGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR GCA 72 bp | ACGAGCCACGTGCTCCTTGAGAAGGCCCCACCAACCTaGCAGCCTCTGGTTTCAGATCAGCAGTTGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: TSHVLLEKAPPT*QPLVSDQQLEL Trigger: CAGTTCCAACTGCTGATCTGAAACCAGAGGCTGGCAGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCTTTTGCCCTCAGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTCGAGCCACGTGCTCCTaGAGAAGGCCCCACCAACCT | + |
|
Preference number: 3 (lower is better) Translates to: FSFALRCRAPDSYMPSHARATCS*RRPHQP Trigger: AGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCG...AGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCTGAGGGCAAAAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTTGAGAAGGCCCCACCAACCTGCCAGCCTCTGGTTTCAGATCAGCAGTTGAGCCTGGTCTTTGGTTaGGGGTTCGTGTGTGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLEKAPPTCQPLVSDQQLSLVFG*GFVCGN Trigger: GTTTCCACACACGAACCCCAAACCAAAGACCAGGCT...CAACTGCTGATCTGAAACCAGAGGCTGGCAGGTTGGTGGGGCCTTCTCAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCCCACCAACCTGCCAGCCTCTGGTTTCAGATCAGCAGTTGGAACTGTCCGTCCCTCCTCGAATTGAGTaGGGTCTTTTTCAGCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: APPTCQPLVSDQQLELSVPPRIE*GLFQQP Trigger: AGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGG...GACGGACAGTTCCAACTGCTGATCTGAAACCAGAGGCTGGCAGGTTGGTGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR CCA 72 bp | CACCAACCTGCCAGCCTCTGGTTTCAGATCAGCAGTTaGAACTGTCCGTCTCTCCTGTTTTCCCACCGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HQPASLWFQISS*NCPSLLFSHRC Trigger: ACAGCGGTGGGAAAACAGGAGAGACGGACAGTTCCAACTGCTGATCTGAAACCAGAGGCTGGCAGGTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTAACAAAACTAAGCCGTGATCCTCTTGCCTaGGTCTCTCCATGCCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGAEHLTATCRVMLTKLSRDPLA*VSPCPR Trigger: CCTAGGGCATGGAGAGACCAAGGCAAGAGGATCACG...GCTTAGTTTTGTTAGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR CCA 72 bp | TGGTTGGGTTTCACCTCCCTCCTCCTCGAATTGAGTTaGGTCTTTTTCAGCAGCCTGGTCTTTGGTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: WLGFTSLLLELS*VFFSSLVFGLG Trigger: CCCCAAACCAAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAAACCCAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGACGAGCCACGTGCTCCTaGAGAAGGCCCCACCAACCT | + |
|
Preference number: 3 (lower is better) Translates to: MCGKTQLTHGTELVAYRGRATCS*RRPHQP Trigger: AGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCG...TCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR TCA 72 bp | AGGGGTACATATGTTCCCTGTAAAGACACCAACCTCTaGGTTCCGCCACCGCCTCAGGGAAGTCATACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RGTYVPCKDTNL*VPPPPQGSHTS Trigger: TGAAGTATGACTTCCCTGAGGCGGTGGCGGAACTCAGAGGTTGGTGTCTTTACAGGGAACATATGTACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR CCA 72 bp | CAAACTAAGACTCAGGCTCACGTGATCCTCTTGCCTTaGTCTCTCCATGCCCTAGGGCTTGGATTAAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: QTKTQAHVILLP*SLHALGLGLKG Trigger: ACCCTTTAATCCAAGCCCTAGGGCATGGAGAGACCAAGGCAAGAGGATCACGTGAGCCTGAGTCTTAGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | GGATATAAAATCAGCACTGACAGACAGGGAAAACAGTCAAGCCCATTGACCCTAGCTCACGTGATCCTCTaGCCTTGGTCTCTCCATGCC | + |
|
Preference number: 3 (lower is better) Translates to: GYKISTDRQGKQSSPLTLAHVIL*PWSLHA Trigger: GGCATGGAGAGACCAAGGCAAGAGGATCACGTGAGC...TAGGGTCAATGGGCTTGACTGTTTTCCCTGTCTGTCAGTGCTGATTTTATATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR CCA 72 bp | CTCTCCTGTTTTCCCACCGCTGTCTTCTTTGTATTCTaGTTGGGTTTCACCTCCCTCCTCCTCGAATTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSCFPTAVFFVF*LGFTSLLLELS Trigger: ACTCAATTCGAGGAGGAGGGAGGTGAAACCCAACCAGAATACAAAGAAGACAGCGGTGGGAAAACAGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | CCACTGACGTTGAGGCTGCTGCAGTTTCCCATCAGAAGACCAGACCCCAGAGACGTTCTTTATATGGAGTaGTACTGTGTGATCCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: PLTLRLLQFPIRRPDPRDVLYME*YCVIQT Trigger: AGTTTGGATCACACAGTACAACTCCATATAAAGAAC...GTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGCAGCAGCCTCAACGTCAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR TCA 72 bp | ATAGTCAACTGTGTTCAATTGAGACCTAAGAGTCCATaGTGCCACCTCCTGAGCTCAGAGACGGAAGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: IVNCVQLRPKSP*CHLLSSETEGL Trigger: GAGACCTTCCGTCTCTGAGCTCAGGAGGTGGCATCATGGACTCTTAGGTCTCAATTGAACACAGTTGACTAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR TCA 72 bp | TATTCTGGTTGGGTTTCACCTCCCTCCTCCTCGAATTaGGTTGGGTCTTTTTCAGCAGCCTGGTCTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: YSGWVSPPSSSN*VGSFSAAWSLV Trigger: AACCAAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAAACCCAACCAGAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAAGAGAATTGTCCCCAAGCCGAGGAAGTGTCCTCACCTGCCTTCCCACCTTTCCCGTGAATAATTaGATGAGGGGTACATATGTT | + |
|
Preference number: 3 (lower is better) Translates to: TERELSPSRGSVLTCLPTFPVNN*MRGTYV Trigger: AACATATGTACCCCTCATCAAATTATTCACGGGAAA...GGTGGGAAGGCAGGTGAGGACACTTCCTCGGCTTGGGGACAATTCTCTTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR CCA 72 bp | TTTCAGCAGCCTGGTCTTTGGTTTGGGGTTCGTGTGTaGAAACAGGATCTAATACTACAACTGGCTCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FQQPGLWFGVRV*KQDLILQLAQL Trigger: AAGCTGAGCCAGTTGTAGTATTAGATCCTGTTTCCACACACGAACCCCAAACCAAAGACCAGGCTGCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR CCA 72 bp | GTGTGCTTGTCACTTATCTTCACTGTGCGTGAGAGCTaGTGTAAAATATGGTACTTGTGGCACGTGAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: VCLSLIFTVRES*CKIWYLWHVNV Trigger: CACATTCACGTGCCACAAGTACCATATTTTACACCAGCTCTCACGCACAGTGAAGATAAGTGACAAGCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR CCA 72 bp | CGAATTGAGTTGGGTCTTTTTCAGCAGCCTGGTCTTTaGTTTGGGGTTCGTGTGTGGAAACAGGATCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: RIELGLFQQPGL*FGVRVWKQDLI Trigger: TATTAGATCCTGTTTCCACACACGAACCCCAAACCAAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | GGATATAAAATCAGCACTGACAGACAGGGAAAACAGTCAAGCCCATTGACCCTATGTTATCATTTTCTTTaGCCCTCAGGTGCAGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GYKISTDRQGKQSSPLTLCYHFL*PSGAEH Trigger: GTGCTCTGCACCTGAGGGCAAAAGAAAATGATAACA...TAGGGTCAATGGGCTTGACTGTTTTCCCTGTCTGTCAGTGCTGATTTTATATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGTAAAATATGGTACTTGTGGCACGTGAATGTGTGGGAAAACACAGTTAACTCCCTCCTCCTCGAATaGAGTTGGGTCTTTTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: WCKIWYLWHVNVWENTVNSLLLE*SWVFFS Trigger: GCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGA...GTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR CCA 72 bp | ACTGTGCGTGAGAGCTGGTGTAAAATATGGTACTTGTaGCACGTGAATGTGTGGGAAAACACAGTTAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: TVRESWCKIWYL*HVNVWENTVNS Trigger: TGAGTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCAGCTCTCACGCACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAAGGTTTGAGCGTCCCTCTAAGCCAATTCTCTGTTGATGCTGCCAAGACACCCAGAAGATGCATTTaGCTAAACAGCTTACTTATG | + |
|
Preference number: 3 (lower is better) Translates to: IQGLSVPLSQFSVDAAKTPRRCI*LNSLLM Trigger: CATAAGTAAGCTGTTTAGCAAAATGCATCTTCTGGG...TGTCTTGGCAGCATCAACAGAGAATTGGCTTAGAGGGACGCTCAAACCTTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTATATGGAGTTGTACTGTACAACTGGCTCAGCTaGGTTTTCACTGCCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: ETLAGLLFFICSLYGVVLYNWLS*VFTAHT Trigger: TGTGTGGGCAGTGAAAACCAAGCTGAGCCAGTTGTA...CAGTACAACTCCATATAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR TCA 72 bp | GTGAGAGCTGGTGTAAAATATGGTACTTGTGGCACGTaGATGTGTGGGAAAACACAGTTAACTCATGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: VRAGVKYGTCGT*MCGKTQLTHGT Trigger: TGTTCCATGAGTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCAGCTCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | AATCTGCCAGCAGTTAGCATATTGTTTAGCAGTCTTATTCAGTCAGAGAAACACCCACCGCTGTCTTCTTaGTATTCTGGTTGGGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NLPAVSILFSSLIQSEKHPPLSS*YSGWVS Trigger: TGAAACCCAACCAGAATACAAAGAAGACAGCGGTGG...GTGTTTCTCTGACTGAATAAGACTGCTAAACAATATGCTAACTGCTGGCAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGACCCAGAAGATGCATTTaGCTAAACAGCTTACTTATG | + |
|
Preference number: 3 (lower is better) Translates to: MCGKTQLTHGTELVAYRGPRRCI*LNSLLM Trigger: CATAAGTAAGCTGTTTAGCAAAATGCATCTTCTGGG...TCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR CCA 72 bp | TGGTGTAAAATATGGTACTTGTGGCACGTGAATGTGTaGGAAAACACAGTTAACTCATGGAACAGAACTAGT | + |
|
Preference number: 3 (lower is better) Translates to: WCKIWYLWHVNV*ENTVNSWNRTS Trigger: ACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR GCA 72 bp | TTGCAGCATAACAGAACCCATCTAAAAGAATTAATCTaGCAGCAGTTAGCATATTGTTTAGCAGTCTTATTC | + |
|
Preference number: 3 (lower is better) Translates to: LQHNRTHLKELI*QQLAYCLAVLF Trigger: GAATAAGACTGCTAAACAATATGCTAACTGCTGGCAGATTAATTCTTTTAGATGGGTTCTGTTATGCTGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR CAA 72 bp | TTCCTGCCGGTTACACGCAGACGAGCCACGTGCTCCTaGAGAAGGCCCCACCAACCTGCCAGCCTCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLPVTRRRATCS*RRPHQPASLWF Trigger: AAACCAGAGGCTGGCAGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCGTGTAACCGGCAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | CCACTGACGTTGAGGCTGCTGCAGTTTCCCATCAGAAGACCAGACCCCAGAGACCTATTGCCACTGGGGTaGGATCGCTTCCGGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: PLTLRLLQFPIRRPDPRDLLPLG*DRFRII Trigger: TATGATCCGGAAGCGATCTCACCCCAGTGGCAATAG...GTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGCAGCAGCCTCAACGTCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | GTTACACGCAGACGAGCCACGTGCTCCTTGAGAAGGCCCCACCAACCTGCCAGCCAGCTTGGTTTTCACTaGCCACACATTTTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTRRRATCSLRRPHQPASQLGFH*PHIFSC Trigger: ACAGGAGAAAATGTGTGGGCAGTGAAAACCAAGCTG...GCTGGCAGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCGTGTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CCA 90 bp | CTCCTTGAGAAGGCCCCACCAACCTGCCAGCCTCTGGTTTCAGATCAGCAGTTGGCTTTCAAAAGCTGCTaGTCAGGAAGGGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLEKAPPTCQPLVSDQQLAFKSC*SGRELC Trigger: GCAGAGCTCCCTTCCTGACCAGCAGCTTTTGAAAGC...CAACTGCTGATCTGAAACCAGAGGCTGGCAGGTTGGTGGGGCCTTCTCAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | GCAGTTTCCCATCAGAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTTCTGCCCTTGAGAGAGTCTaGCTTTGCCTTGGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVSHQKTRPQRLLRAFFSALERV*LCLGSG Trigger: GCCAGACCCAAGGCAAAGCCAGACTCTCTCAAGGGC...AGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR CAA 72 bp | CTGTCCGTCTCTCCTGTTTTCCCACCGCTGTCTTCTTaGTATTCTGGTTGGGTTTCACCTCCCTCCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSVSPVFPPLSS*YSGWVSPPSSS Trigger: CGAGGAGGAGGGAGGTGAAACCCAACCAGAATACAAAGAAGACAGCGGTGGGAAAACAGGAGAGACGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | GTTCCGCCACCGCCTCAGGGAAGTCATACTTCATATAGAAACCGGAAAGAACCCATCCACCGCACTTTCTaGGCCCTTGAGAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPPPPQGSHTSYRNRKEPIHRTF*ALERVW Trigger: CCAGACTCTCTCAAGGGCTCAGAAAGTGCGGTGGAT...GGGTTCTTTCCGGTTTCTATATGAAGTATGACTTCCCTGAGGCGGTGGCGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | GTTACACGCAGACGAGCCACGTGCTCCTTGAGAAGGCCCCACCAACCTGCCAGCGCTTCATCTCGTTCTTaGCTAATTTTGTCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTRRRATCSLRRPHQPASASSRS*LILSHF Trigger: GAAGTGTGACAAAATTAGGCAAGAACGAGATGAAGC...GCTGGCAGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCGTGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | CTCCTTGAGAAGGCCCCACCAACCTGCCAGCCTCTGGTTTCAGATCAGCAGTTGAAAGCTTTCAAAAGCTaGTGGTCAGGAAGGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLEKAPPTCQPLVSDQQLKAFKS*WSGREL Trigger: GAGCTCCCTTCCTGACCAGCAGCTTTTGAAAGCTTT...CAACTGCTGATCTGAAACCAGAGGCTGGCAGGTTGGTGGGGCCTTCTCAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | TGTTTTCCCACCGCTGTCTTCTTTGTATTCTGGTTGGGTTTCACCTCCCTCCTCGCCCTTGAGAGAGTCTaGCTTTGCCTTGGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFPTAVFFVFWLGFTSLLALERV*LCLGSG Trigger: GCCAGACCCAAGGCAAAGCCAGACTCTCTCAAGGGC...GAGGAGGGAGGTGAAACCCAACCAGAATACAAAGAAGACAGCGGTGGGAAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | GCCCCACCAACCTGCCAGCCTCTGGTTTCAGATCAGCAGTTGGAACTGTCCGTCTTATGGATCTCTTTGTaGAGTGCTTCATTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: APPTCQPLVSDQQLELSVLWISL*SASFSS Trigger: GCTGGAGAATGAAGCACTTCACAAAGAGATCCATAA...GACGGACAGTTCCAACTGCTGATCTGAAACCAGAGGCTGGCAGGTTGGTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | TCAGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTAACAAAACTAAGCAAGCTGGTGATGAGCTaGAGCTGCTTCTCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGAEHLTATCRVMLTKLSKLVMS*SCFSSS Trigger: GGACGAGGAGAAGCAGCTGCAGCTCATCACCAGCTT...GCTTAGTTTTGTTAGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | TTCACCTCCCTCCTCCTCGAATTGAGTTGGGTCTTTTTCAGCAGCCTGGTCTTTAAGCTGGTGATGAGCTaGAGCTGCTTCTCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTSLLLELSWVFFSSLVFKLVMS*SCFSSS Trigger: GGACGAGGAGAAGCAGCTGCAGCTCATCACCAGCTT...AAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGTTTCCCATCAGAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTACAACTGGCTCAGCTTaGTTTTCACTGCCCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: AAVSHQKTRPQRLLRAFFTTGSA*FSLPTH Trigger: ATGTGTGGGCAGTGAAAACCAAGCTGAGCCAGTTGT...AAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR TCA 90 bp | GCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTTCCCATCAGAAGACCAGAGCTCCAGCTGTTGTCTaGGGTTATGGATCTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AIGPTDVEAAAVSHQKTRAPAVV*GYGSLC Trigger: ACAAAGAGATCCATAACCTCAGACAACAGCTGGAGC...TCTGGTCTTCTGATGGGAAACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | AGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTAACAAAACTAAGCCTCTGAAGTTCATCCACTaGATGCTTCAGGTTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RCRAPDSYMPSHANKTKPLKFIH*MLQVPG Trigger: GCCCGGAACCTGAAGCATTCAGTGGATGAACTTCAG...AGGCTTAGTTTTGTTAGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | TTCACCTCCCTCCTCCTCGAATTGAGTTGGGTCTTTTTCAGCAGCCTGGTCTTTCTATTGCCACTGGGGTaGGATCGCTTCCGGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: FTSLLLELSWVFFSSLVFLLPLG*DRFRII Trigger: TATGATCCGGAAGCGATCTCACCCCAGTGGCAATAG...AAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAGAGAATTGTCCCCAAGCCGAGGAAGTGTCCTCACCTGCCTTCCCACCAAGACTCTGCTTTCTTaGGAAGGTCCTTCTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TERELSPSRGSVLTCLPTKTLLS*EGPSPV Trigger: AACTGGAGAAGGACCTTCGCAAGAAAGCAGAGTCTT...GGTGGGAAGGCAGGTGAGGACACTTCCTCGGCTTGGGGACAATTCTCTTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | ACCCTTCAAAACAGAGACGCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTCAGCATCTGTGTCGGTaGCTGGGTCATCATCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLQNRDAIGPTDVEAAAVQHLCR*LGHHHQ Trigger: TTGATGATGATGACCCAGCCACCGACACAGATGCTG...AACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGCGTCTCTGTTTTGAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | CCACTGACGTTGAGGCTGCTGCAGTTTCCCATCAGAAGACCAGACCCCAGAGACGATCTCGAAGTTCTTTaGTTTGCTTCTGACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLTLRLLQFPIRRPDPRDDLEVL*FASDTE Trigger: TTCAGTGTCAGAAGCAAATCAAAGAACTTCGAGATC...GTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGCAGCAGCCTCAACGTCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | GTGGAAACAGGATCTAATACTACAACTGGCTCAGCTTGGTTTTCACTGCCCACAGAGAGAGTCTGGCTTTaGCTTGGGTCTGGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VETGSNTTTGSAWFSLPTERVWL*LGSGCL Trigger: CAGACAGCCAGACCCAAGGCAAAGCCAGACTCTCTC...TGTGGGCAGTGAAAACCAAGCTGAGCCAGTTGTAGTATTAGATCCTGTTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | ACCCTTCAAAACAGAGACGCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTCTCTGTAATTACGTCTaGCCCCAGTTTGGCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLQNRDAIGPTDVEAAAVLCNYV*PQFGHV Trigger: TACATGGCCAAACTGGGGCCAGACGTAATTACAGAG...AACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGCGTCTCTGTTTTGAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR CAA 72 bp | GTATTCTGGTTGGGTTTCACCTCCCTCCTCCTCGAATaGAGTTGGGTCTTTTTCAGCAGCCTGGTCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFWLGFTSLLLE*SWVFFSSLVFG Trigger: ACCAAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAAACCCAACCAGAATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| 3UTR CAA 72 bp | TCCTGTTTTCCCACCGCTGTCTTCTTTGTATTCTGGTaGGGTTTCACCTCCCTCCTCCTCGAATTGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCFPTAVFFVFW*GFTSLLLELSW Trigger: CCAACTCAATTCGAGGAGGAGGGAGGTGAAACCCAACCAGAATACAAAGAAGACAGCGGTGGGAAAACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | GCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTTCCCATCAGAAGACCAGATTATGGATCTCTTTGTaGAGTGCTTCATTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AIGPTDVEAAAVSHQKTRLWISL*SASFSS Trigger: GCTGGAGAATGAAGCACTTCACAAAGAGATCCATAA...TCTGGTCTTCTGATGGGAAACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | GGTTTCAGATCAGCAGTTGGAACTGTCCGTCTCTCCTGTTTTCCCACCGCTGTCTCAGCTGTCTCTGGCTaGGTTGTCTTTTCTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GFRSAVGTVRLSCFPTAVSAVSG*VVFSFL Trigger: TAAGAAAGAAAAGACAACTCAGCCAGAGACAGCTGA...GACAGCGGTGGGAAAACAGGAGAGACGGACAGTTCCAACTGCTGATCTGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | GGATATAAAATCAGCACTGACAGACAGGGAAAACAGTCAAGCCCATTGACCCTAATCCACCGCACTTTCTaGGCCCTTGAGAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYKISTDRQGKQSSPLTLIHRTF*ALERVW Trigger: CCAGACTCTCTCAAGGGCTCAGAAAGTGCGGTGGAT...TAGGGTCAATGGGCTTGACTGTTTTCCCTGTCTGTCAGTGCTGATTTTATATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | GCTGCAGTTTCCCATCAGAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTTGTTTTCTGGTTCTCTaGTCGAAGGTCTTCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: AAVSHQKTRPQRLLRAFFCFLVL*SKVFIF Trigger: GAATATGAAGACCTTCGAGCAGAGAACCAGAAAACA...AAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | ACCCTTCAAAACAGAGACGCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTAAGACTCTGCTTTCTTaGGAAGGTCCTTCTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLQNRDAIGPTDVEAAAVKTLLS*EGPSPV Trigger: AACTGGAGAAGGACCTTCGCAAGAAAGCAGAGTCTT...AACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGCGTCTCTGTTTTGAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | AGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTAACAAAACTAAGCCTCTCTGTAATTACGTCTaGCCCCAGTTTGGCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: RCRAPDSYMPSHANKTKPLCNYV*PQFGHV Trigger: TACATGGCCAAACTGGGGCCAGACGTAATTACAGAG...AGGCTTAGTTTTGTTAGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | ACAGAAAGAGAATTGTCCCCAAGCCGAGGAAGTGTCCTCACCTGCCTTCCCACCTCTTCTTCAAGCTGCTaGATAAGTTTTGCGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TERELSPSRGSVLTCLPTSSSSC*ISFAFS Trigger: CGAAAACGCAAAACTTATCCAGCAGCTTGAAGAAGA...GGTGGGAAGGCAGGTGAGGACACTTCCTCGGCTTGGGGACAATTCTCTTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | GCAGTTTCCCATCAGAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTTCTGATCTCGAAGTTCTTTaGTTTGCTTCTGACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVSHQKTRPQRLLRAFFSDLEVL*FASDTE Trigger: TTCAGTGTCAGAAGCAAATCAAAGAACTTCGAGATC...AGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | ATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAGCCTCTTCAGGTCTGTaGCTTCCTCAGCTGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MCGKTQLTHGTELVAYRGASSGL*LPQLSL Trigger: CAGAGACAGCTGAGGAAGTCACAGACCTGAAGAGGC...TCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | GGTTTCAGATCAGCAGTTGGAACTGTCCGTCTCTCCTGTTTTCCCACCGCTGTCTTAACCGGTCTAAGATaGACTCCCTTCTTAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GFRSAVGTVRLSCFPTAVLTGLR*TPFLIL Trigger: CAGAATTAAGAAGGGAGTTCATCTTAGACCGGTTAA...GACAGCGGTGGGAAAACAGGAGAGACGGACAGTTCCAACTGCTGATCTGAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | GCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTTCCCATCAGAAGACCAGATGTTTTCTGGTTCTCTaGTCGAAGGTCTTCATATTC | + |
|
Preference number: 4 (lower is better) Translates to: AIGPTDVEAAAVSHQKTRCFLVL*SKVFIF Trigger: GAATATGAAGACCTTCGAGCAGAGAACCAGAAAACA...TCTGGTCTTCTGATGGGAAACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| CDS-3UTR GCA 90 bp | TTTTCTTTTGCCCTCAGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTAGTTCCAGGTTCACTTaGAGTTCCTCATACTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFALRCRAPDSYMPSHASSRFT*SSSYSS Trigger: TGAAGAGTATGAGGAACTGCAAGTGAACCTGGAACT...AGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCTGAGGGCAAAAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | GTTCCGCCACCGCCTCAGGGAAGTCATACTTCATATAGAAACCGGAAAGAACCCAGTTCCAGGTTCACTTaGAGTTCCTCATACTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPPPPQGSHTSYRNRKEPSSRFT*SSSYSS Trigger: TGAAGAGTATGAGGAACTGCAAGTGAACCTGGAACT...GGGTTCTTTCCGGTTTCTATATGAAGTATGACTTCCCTGAGGCGGTGGCGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| CDS-3UTR GCA 90 bp | GTTCCGCCACCGCCTCAGGGAAGTCATACTTCATATAGAAACCGGAAAGAACCCTTGTGCAAAAGACTCTaGTTTCTTGCGAAGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPPPPQGSHTSYRNRKEPLCKRL*FLAKVL Trigger: AAGGACCTTCGCAAGAAAGCAGAGTCTTTTGCACAA...GGGTTCTTTCCGGTTTCTATATGAAGTATGACTTCCCTGAGGCGGTGGCGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| CDS-3UTR GCA 90 bp | ATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAGAGAGAGTCTGGCTTTaGCTTGGGTCTGGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MCGKTQLTHGTELVAYRGERVWL*LGSGCL Trigger: CAGACAGCCAGACCCAAGGCAAAGCCAGACTCTCTC...TCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| CDS-3UTR CCA 90 bp | ACCCTTCAAAACAGAGACGCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTGGTTTTCCAGCTCGATaGCTAACACCTTCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLQNRDAIGPTDVEAAAVGFPAR*LTPSFL Trigger: AAGAAAAGAAGGTGTTAGCCATCGAGCTGGAAAACC...AACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGCGTCTCTGTTTTGAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| CDS-3UTR CCA 90 bp | GGTTTCAGATCAGCAGTTGGAACTGTCCGTCTCTCCTGTTTTCCCACCGCTGTCTCTTCTTCAAGCTGCTaGATAAGTTTTGCGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GFRSAVGTVRLSCFPTAVSSSSC*ISFAFS Trigger: CGAAAACGCAAAACTTATCCAGCAGCTTGAAGAAGA...GACAGCGGTGGGAAAACAGGAGAGACGGACAGTTCCAACTGCTGATCTGAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | GGATATAAAATCAGCACTGACAGACAGGGAAAACAGTCAAGCCCATTGACCCTAAACCCAACACTGGCATaGACTTGGACTCTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYKISTDRQGKQSSPLTLNPTLA*TWTLRW Trigger: CCACCTCAGAGTCCAAGTCCATGCCAGTGTTGGGTT...TAGGGTCAATGGGCTTGACTGTTTTCCCTGTCTGTCAGTGCTGATTTTATATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR TCA 90 bp | CATGCCCTAGGGCTTGGATTAAAGGGTGCCTTTAAGATAATTGTTAAGTTTGGTGCCTCTTCAGGTCTGTaGCTTCCTCAGCTGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HALGLGLKGAFKIIVKFGASSGL*LPQLSL Trigger: CAGAGACAGCTGAGGAAGTCACAGACCTGAAGAGGC...ACCAAACTTAACAATTATCTTAAAGGCACCCTTTAATCCAAGCCCTAGGGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | GACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTATATGGAGTCACTTTCTGAGCCCTTaGGAGAGTCTGGCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPRDSCGPSFLYMFFIWSHFLSP*ESLALP Trigger: AGGCAAAGCCAGACTCTCTCAAGGGCTCAGAAAGTG...ACTCCATATAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | GCAGTTTCCCATCAGAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTTCTACATGGACACTCTGTTaGATTTTTCTAAGACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVSHQKTRPQRLLRAFFSTWTLC*IFLRLS Trigger: GGAAAGTCTTAGAAAAATGCAACAGAGTGTCCATGT...AGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | TCAGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTAACAAAACTAAGCGGTTTTCCAGCTCGATaGCTAACACCTTCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGAEHLTATCRVMLTKLSGFPAR*LTPSFL Trigger: AAGAAAAGAAGGTGTTAGCCATCGAGCTGGAAAACC...GCTTAGTTTTGTTAGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | GAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTATTCTCCTCCGAGCTCTaGTATTTCTGCTCTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EDQTPETLAGLLFFICSLFSSEL*YFCSSS Trigger: GGAGCTAGAGCAGAAATACCAGAGCTCGGAGGAGAA...TAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGGTTTGAGCGTCCCTCTAAGCCAATTCTCTGTTGATGCTGCCAAGACACTCCTCGAATTGAGTTaGGTCTTTTTCAGCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQGLSVPLSQFSVDAAKTLLELS*VFFSSL Trigger: CAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAG...TGTCTTGGCAGCATCAACAGAGAATTGGCTTAGAGGGACGCTCAAACCTTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR TCA 90 bp | AAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAATCCCTGTTCTGAAGTTCATCCACTaGATGCTTCAGGTTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTQLTHGTELVAYRGIPVLKFIH*MLQVPG Trigger: GCCCGGAACCTGAAGCATTCAGTGGATGAACTTCAG...AACAGGGATTCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | CATGCCCTAGGGCTTGGATTAAAGGGTGCCTTTAAGATAATTGTTAAGTTTGGTCACTTTCTGAGCCCTTaGGAGAGTCTGGCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HALGLGLKGAFKIIVKFGHFLSP*ESLALP Trigger: AGGCAAAGCCAGACTCTCTCAAGGGCTCAGAAAGTG...ACCAAACTTAACAATTATCTTAAAGGCACCCTTTAATCCAAGCCCTAGGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | CACGTGAATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTAGGGGACACGGGTTGTTaGATTCTGCCTCCAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HVNVWENTVNSWNRTSSLGDTGC*ILPPEF Trigger: AAACTCTGGAGGCAGAATTCAACAACCCGTGTCCCC...TAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACATTCACGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR GCA 90 bp | GGTTTCAGATCAGCAGTTGGAACTGTCCGTCTCTCCTGTTTTCCCACCGCTGTCAATGAACATCTCTTGTaGAAAAGACTCTGCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFRSAVGTVRLSCFPTAVNEHLL*KRLCFL Trigger: AAGAAAGCAGAGTCTTTTGCACAAGAGATGTTCATT...GACAGCGGTGGGAAAACAGGAGAGACGGACAGTTCCAACTGCTGATCTGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | GAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTACTTCATATTCGCCAATaGCTTGCTCCTTCAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EDQTPETLAGLLFFICSLLHIRQ*LAPSSW Trigger: CCAGCTTGAAGGAGCAAGCCATTGGCGAATATGAAG...TAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTCTCTGCAGCAGAAGGTaGCTTTGTCTCTTCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRPDPRDSCGPSFLYMFFLCSRR*LCLFSL Trigger: CAAACTGAAGAGACAAAGCCACCTTCTGCTGCAGAG...AAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | CACGTGAATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTAGCTTTCAAAAGCTGCTaGTCAGGAAGGGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HVNVWENTVNSWNRTSSLAFKSC*SGRELC Trigger: GCAGAGCTCCCTTCCTGACCAGCAGCTTTTGAAAGC...TAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACATTCACGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | GGATATAAAATCAGCACTGACAGACAGGGAAAACAGTCAAGCCCATTGACCCTAACACTGGCATGGACTTaGACTCTGAGGTGGCTAATA | + |
|
Preference number: 4 (lower is better) Translates to: GYKISTDRQGKQSSPLTLTLAWT*TLRWLI Trigger: TATTAGCCACCTCAGAGTCCAAGTCCATGCCAGTGT...TAGGGTCAATGGGCTTGACTGTTTTCCCTGTCTGTCAGTGCTGATTTTATATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CCA 90 bp | TCAGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTAACAAAACTAAGCTTTGGGGTTCGTGTGTaGAAACAGGATCTAATACTA | + |
|
Preference number: 4 (lower is better) Translates to: SGAEHLTATCRVMLTKLSFGVRV*KQDLIL Trigger: TAGTATTAGATCCTGTTTCCACACACGAACCCCAAA...GCTTAGTTTTGTTAGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR GCA 90 bp | GACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTATATGGAGTAAAGCTTTCAAAAGCTaGTGGTCAGGAAGGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPRDSCGPSFLYMFFIWSKAFKS*WSGREL Trigger: GAGCTCCCTTCCTGACCAGCAGCTTTTGAAAGCTTT...ACTCCATATAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | GAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAATCCCTGTCATCATCTCTTCCACTaGTTGCCTCTTCAGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ENTVNSWNRTSSLPRNPCHHLFH*LPLQVC Trigger: ACAGACCTGAAGAGGCAAGCAGTGGAAGAGATGATG...ACAGGGATTCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | CATGCCCTAGGGCTTGGATTAAAGGGTGCCTTTAAGATAATTGTTAAGTTTGGTTTCTCCTCCGAGCTCTaGTATTTCTGCTCTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HALGLGLKGAFKIIVKFGFSSEL*YFCSSS Trigger: GGAGCTAGAGCAGAAATACCAGAGCTCGGAGGAGAA...ACCAAACTTAACAATTATCTTAAAGGCACCCTTTAATCCAAGCCCTAGGGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGGTTTGAGCGTCCCTCTAAGCCAATTCTCTGTTGATGCTGCCAAGACATTCCTCAGCTGTCTCTaGCTGAGTTGTCTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IQGLSVPLSQFSVDAAKTFLSCL*LSCLFF Trigger: AAAGAAAAGACAACTCAGCCAGAGACAGCTGAGGAA...TGTCTTGGCAGCATCAACAGAGAATTGGCTTAGAGGGACGCTCAAACCTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | GACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTATATGGAGTTCTTTTTCAGCAGCCTaGTCTTTGGTTTGGGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DPRDSCGPSFLYMFFIWSSFSAA*SLVWGS Trigger: CGAACCCCAAACCAAAGACCAGGCTGCTGAAAAAGA...ACTCCATATAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| 3UTR CAA 72 bp | TTCACTGTGCGTGAGAGCTGGTGTAAAATATGGTACTaGTGGCACGTGAATGTGTGGGAAAACACAGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTVRESWCKIWY*WHVNVWENTVN Trigger: GTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCAGCTCTCACGCACAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR TCA 90 bp | AGAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTTCAGCTGTCTCTGGCTaGGTTGTCTTTTCTTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RRPDPRDSCGPSFLYMFFSAVSG*VVFSFL Trigger: TAAGAAAGAAAAGACAACTCAGCCAGAGACAGCTGA...AAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | AAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAATCCCTGTTCATCATCTCTTCCACTaGTTGCCTCTTCAGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KTQLTHGTELVAYRGIPVHHLFH*LPLQVC Trigger: ACAGACCTGAAGAGGCAAGCAGTGGAAGAGATGATG...AACAGGGATTCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | AAAAACAATGTGTGCTTGTCACTTATCTTCACTGTGCGTGAGAGCTGGTGTAAACTTCATATTCGCCAATaGCTTGCTCCTTCAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNNVCLSLIFTVRESWCKLHIRQ*LAPSSW Trigger: CCAGCTTGAAGGAGCAAGCCATTGGCGAATATGAAG...TTTACACCAGCTCTCACGCACAGTGAAGATAAGTGACAAGCACACATTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | AAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAATCCCTGTTCTCTGCAGCAGAAGGTaGCTTTGTCTCTTCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTQLTHGTELVAYRGIPVLCSRR*LCLFSL Trigger: CAAACTGAAGAGACAAAGCCACCTTCTGCTGCAGAG...AACAGGGATTCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | AATTGTTATCATTTTCTTTTGCCCTCAGGTGCAGAGCACCTGACAGCTACATGCTTCCTCAGCTGTCTCTaGCTGAGTTGTCTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NCYHFLLPSGAEHLTATCFLSCL*LSCLFF Trigger: AAAGAAAAGACAACTCAGCCAGAGACAGCTGAGGAA...GCATGTAGCTGTCAGGTGCTCTGCACCTGAGGGCAAAAGAAAATGATAACAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | GACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTATATGGAGTTTGTGCAAAAGACTCTaGTTTCTTGCGAAGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DPRDSCGPSFLYMFFIWSLCKRL*FLAKVL Trigger: AAGGACCTTCGCAAGAAAGCAGAGTCTTTTGCACAA...ACTCCATATAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | GGATATAAAATCAGCACTGACAGACAGGGAAAACAGTCAAGCCCATTGACCCTACTCTCTTCTTCAAGCTaGTGGATAAGTTTTGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GYKISTDRQGKQSSPLTLLSSSS*WISFAF Trigger: AAACGCAAAACTTATCCAGCAGCTTGAAGAAGAGAG...TAGGGTCAATGGGCTTGACTGTTTTCCCTGTCTGTCAGTGCTGATTTTATATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CCA 90 bp | TGGTGTAAAATATGGTACTTGTGGCACGTGAATGTGTGGGAAAACACAGTTAACGTCTTCTTTGTATTCTaGTTGGGTTTCACCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WCKIWYLWHVNVWENTVNVFFVF*LGFTSL Trigger: GAGGGAGGTGAAACCCAACCAGAATACAAAGAAGAC...GTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR GCA 90 bp | GGATATAAAATCAGCACTGACAGACAGGGAAAACAGTCAAGCCCATTGACCCTAACATGGACACTCTGTTaGATTTTTCTAAGACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GYKISTDRQGKQSSPLTLTWTLC*IFLRLS Trigger: GGAAAGTCTTAGAAAAATGCAACAGAGTGTCCATGT...TAGGGTCAATGGGCTTGACTGTTTTCCCTGTCTGTCAGTGCTGATTTTATATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | AAAAACAATGTGTGCTTGTCACTTATCTTCACTGTGCGTGAGAGCTGGTGTAAACGGGTTGTTGAATTCTaGCTCCAGAGTTTTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KNNVCLSLIFTVRESWCKRVVEF*LQSFLV Trigger: AACAAGAAAACTCTGGAGGCAGAATTCAACAACCCG...TTTACACCAGCTCTCACGCACAGTGAAGATAAGTGACAAGCACACATTGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR TCA 90 bp | AAAAACAATGTGTGCTTGTCACTTATCTTCACTGTGCGTGAGAGCTGGTGTAAATTAACCGGTCTAAGATaGACTCCCTTCTTAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNNVCLSLIFTVRESWCKLTGLR*TPFLIL Trigger: CAGAATTAAGAAGGGAGTTCATCTTAGACCGGTTAA...TTTACACCAGCTCTCACGCACAGTGAAGATAAGTGACAAGCACACATTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | AATTGTTATCATTTTCTTTTGCCCTCAGGTGCAGAGCACCTGACAGCTACATGCAATGAACATCTCTTGTaGAAAAGACTCTGCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NCYHFLLPSGAEHLTATCNEHLL*KRLCFL Trigger: AAGAAAGCAGAGTCTTTTGCACAAGAGATGTTCATT...GCATGTAGCTGTCAGGTGCTCTGCACCTGAGGGCAAAAGAAAATGATAACAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR GCA 90 bp | CATGCCCTAGGGCTTGGATTAAAGGGTGCCTTTAAGATAATTGTTAAGTTTGGTCTCTCTTCTTCAAGCTaGTGGATAAGTTTTGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HALGLGLKGAFKIIVKFGLSSSS*WISFAF Trigger: AAACGCAAAACTTATCCAGCAGCTTGAAGAAGAGAG...ACCAAACTTAACAATTATCTTAAAGGCACCCTTTAATCCAAGCCCTAGGGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| 3UTR CAA 72 bp | CCATCTAAAAGAATTAATCTGCCAGCAGTTAGCATATaGTTTAGCAGTCTTATTCAGTCAGAGAAACACACG | + |
|
Preference number: 4 (lower is better) Translates to: PSKRINLPAVSI*FSSLIQSEKHT Trigger: CGTGTGTTTCTCTGACTGAATAAGACTGCTAAACAATATGCTAACTGCTGGCAGATTAATTCTTTTAGATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS TCA 90 bp | GGAGGCGGGGGAGGTACCGAATTCTCAGACTGGTTCACTCGCTTCTaGAGTTCATCCACTGAATGCTTCAGGTTCCGGGCCTTCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGGGGTEFSDWFTRF*SSSTECFRFRAFSS Trigger: GGAGGAGAAGGCCCGGAACCTGAAGCATTCAGTGGATGAACTTCAGAAGCGAGTGAACCAGTCTGAGAATTCGGTACCTCCCCCGCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS TCA 90 bp | TTACTGGGAGGCCAGGATTCCCTTCAGCTCATCCACCGCACTTTCTaGGCCCTTGAGAGAGTCTGGCTTTGCCTTGGGTCTGGCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLGGQDSLQLIHRTF*ALERVWLCLGSGCL Trigger: CAGACAGCCAGACCCAAGGCAAAGCCAGACTCTCTCAAGGGCTCAGAAAGTGCGGTGGATGAGCTGAAGGGAATCCTGGCCTCCCAGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | GTTACACGCAGACGAGCCACGTGCTCCTTGAGAAGGCCCCACCAACCTGCCAGCAAAGACTCTGCTTTCTaGCGAAGGTCCTTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VTRRRATCSLRRPHQPASKDSAF*RRSFSS Trigger: ACTGGAGAAGGACCTTCGCAAGAAAGCAGAGTCTTT...GCTGGCAGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCGTGTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | CCACTGACGTTGAGGCTGCTGCAGTTTCCCATCAGAAGACCAGACCCCAGAGACGCACTTTCTGAGCCCTaGAGAGAGTCTGGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLTLRLLQFPIRRPDPRDALSEP*RESGFA Trigger: GGCAAAGCCAGACTCTCTCAAGGGCTCAGAAAGTGC...GTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGCAGCAGCCTCAACGTCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS TCA 90 bp | GTTAAGTGTCCCCAGGATTCCCTTCAGCTCATCCACCGCACTTTCTaGGCCCTTGAGAGAGTCTGGCTTTGCCTTGGGTCTGGCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VKCPQDSLQLIHRTF*ALERVWLCLGSGCL Trigger: CAGACAGCCAGACCCAAGGCAAAGCCAGACTCTCTCAAGGGCTCAGAAAGTGCGGTGGATGAGCTGAAGGGAATCCTGGGGACACTTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CAA 90 bp | GTTACACGCAGACGAGCCACGTGCTCCTTGAGAAGGCCCCACCAACCTGCCAGCTGTCACACTTCTCCTTaGTTTTCTGGTTCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VTRRRATCSLRRPHQPASCHTSP*FSGSLL Trigger: GAGCAGAGAACCAGAAAACAAAGGAGAAGTGTGACA...GCTGGCAGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCGTGTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | CCACTGACGTTGAGGCTGCTGCAGTTTCCCATCAGAAGACCAGACCCCAGAGACAGCCTGGTCTTTGGTTaGGGGTTCGTGTGTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PLTLRLLQFPIRRPDPRDSLVFG*GFVCGN Trigger: GTTTCCACACACGAACCCCAAACCAAAGACCAGGCT...GTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGCAGCAGCCTCAACGTCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CAA 90 bp | GCTGCAGTTTCCCATCAGAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTTCCCCGAGTTTGCTCTaGAGGTTTTCCAGCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: AAVSHQKTRPQRLLRAFFSPSLL*RFSSSM Trigger: CATCGAGCTGGAAAACCTCAAGAGCAAACTCGGGGA...AAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | GCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTTCCCATCAGAAGACCAGATGCTCTAGCTCCCTCTaGTCGTCTTCCAGAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIGPTDVEAAAVSHQKTRCSSSL*SSSRSS Trigger: GGAGCTTCTGGAAGACGACAAGAGGGAGCTAGAGCA...TCTGGTCTTCTGATGGGAAACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | GCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTTCCCATCAGAAGACCAGACATCTCTTCCACTGCTaGCCTCTTCAGGTCTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AIGPTDVEAAAVSHQKTRHLFHC*PLQVCD Trigger: GTCACAGACCTGAAGAGGCAAGCAGTGGAAGAGATG...TCTGGTCTTCTGATGGGAAACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | ACCCTTCAAAACAGAGACGCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTGAGTCTGGCTTTGCCTaGGGTCTGGCTGTCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TLQNRDAIGPTDVEAAAVESGFA*GLAVWL Trigger: TAACCAGACAGCCAGACCCAAGGCAAAGCCAGACTC...AACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGCGTCTCTGTTTTGAAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | ACCCTTCAAAACAGAGACGCTATAGGACCCACTGACGTTGAGGCTGCTGCAGTTTCCCCGAGTTTGCTCTaGAGGTTTTCCAGCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TLQNRDAIGPTDVEAAAVSPSLL*RFSSSM Trigger: CATCGAGCTGGAAAACCTCAAGAGCAAACTCGGGGA...AACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGCGTCTCTGTTTTGAAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | GTTACACGCAGACGAGCCACGTGCTCCTTGAGAAGGCCCCACCAACCTGCCAGCAACATGGACACTCTGTaGCATTTTTCTAAGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VTRRRATCSLRRPHQPASNMDTL*HFSKTF Trigger: GAAAGTCTTAGAAAAATGCAACAGAGTGTCCATGTT...GCTGGCAGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCGTGTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | ACCGCTGTCTTCTTTGTATTCTGGTTGGGTTTCACCTCCCTCCTCCTCGAATTGGAGTCTGGCTTTGCCTaGGGTCTGGCTGTCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TAVFFVFWLGFTSLLLELESGFA*GLAVWL Trigger: TAACCAGACAGCCAGACCCAAGGCAAAGCCAGACTC...CAATTCGAGGAGGAGGGAGGTGAAACCCAACCAGAATACAAAGAAGACAGCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | GCTGCAGTTTCCCATCAGAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTCCACCGCTGTCTTCTTaGTATTCTGGTTGGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AAVSHQKTRPQRLLRAFFPPLSS*YSGWVS Trigger: TGAAACCCAACCAGAATACAAAGAAGACAGCGGTGG...AAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CAA 90 bp | ACAGAAAGAGAATTGTCCCCAAGCCGAGGAAGTGTCCTCACCTGCCTTCCCACCCAGCAGAAGGTGGCTTaGTCTCTTCAGTTTGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TERELSPSRGSVLTCLPTQQKVA*SLQFVL Trigger: CAAAACAAACTGAAGAGACAAAGCCACCTTCTGCTG...GGTGGGAAGGCAGGTGAGGACACTTCCTCGGCTTGGGGACAATTCTCTTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS TCA 90 bp | TACCGAATTCTCAGACTGGTTCACTCGCTTCTGAAGTTCATCCACTaGATGCTTCAGGTTCCGGGCCTTCTCCTCCGAGCTCTGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: YRILRLVHSLLKFIH*MLQVPGLLLRALVF Trigger: AAATACCAGAGCTCGGAGGAGAAGGCCCGGAACCTGAAGCATTCAGTGGATGAACTTCAGAAGCGAGTGAACCAGTCTGAGAATTCGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS TCA 90 bp | TCACTGCCCACACATTTTCTCCTGTATCCACCTTTACTGGGAGGCTaGAAGGTAACCTTGGGATTCGTGCATCCTTCCAATTTACGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLPTHFLLYPPLLGG*KVTLGFVHPSNLRG Trigger: GCCCCGTAAATTGGAAGGATGCACGAATCCCAAGGTTACCTTTCAGCCTCCCAGTAAAGGTGGATACAGGAGAAAATGTGTGGGCAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS CCA 90 bp | CTGAACAGACACACAGGTCTCAGCCGCAGCATCTGTGTCGGTGGCTaGGTCATCATCATCAATGTTTATCTCCTCTGTAATTACGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LNRHTGLSRSICVGG*VIIINVYLLCNYVW Trigger: CCAGACGTAATTACAGAGGAGATAAACATTGATGATGATGACCCAGCCACCGACACAGATGCTGCGGCTGAGACCTGTGTGTCTGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | GCAGTTTCCCATCAGAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTGTCACACTTCTCCTTaGTTTTCTGGTTCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AVSHQKTRPQRLLRAFFSCHTSP*FSGSLL Trigger: GAGCAGAGAACCAGAAAACAAAGGAGAAGTGTGACA...AGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTCTGATGGGAAACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | TTCACCTCCCTCCTCCTCGAATTGAGTTGGGTCTTTTTCAGCAGCCTGGTCTTTCAGAAGCTCCAGCTGTaGTCTGAGGTTATGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: FTSLLLELSWVFFSSLVFQKLQL*SEVMDL Trigger: GAGATCCATAACCTCAGACAACAGCTGGAGCTTCTG...AAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | TCAGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTAACAAAACTAAGCTACAACTGGCTCAGCTaGGTTTTCACTGCCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: SGAEHLTATCRVMLTKLSYNWLS*VFTAHT Trigger: TGTGTGGGCAGTGAAAACCAAGCTGAGCCAGTTGTA...GCTTAGTTTTGTTAGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS TCA 90 bp | TCTCTTTGTGAAGTGCTTCATTCTCCAGCCGCTCCTCCAGCTCTTTaGCCTTTTTCTGATGCTGGATCCTCTCTTCTTCAAGCTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLCEVLHSPAAPPAL*PFSDAGSSLLQAAG Trigger: TCCAGCAGCTTGAAGAAGAGAGGATCCAGCATCAGAAAAAGGTCAAAGAGCTGGAGGAGCGGCTGGAGAATGAAGCACTTCACAAAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS TCA 90 bp | TCTGGCTTTGCCTTGGGTCTGGCTGTCTGGTTAACCGGTCTAAGATaGACTCCCTTCTTAATTCTGTCCATCATCTCTTCCACTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGFALGLAVWLTGLR*TPFLILSIISSTAC Trigger: GCAAGCAGTGGAAGAGATGATGGACAGAATTAAGAAGGGAGTTCATCTTAGACCGGTTAACCAGACAGCCAGACCCAAGGCAAAGCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS GCA 90 bp | GACTCTGCTTTCTTGCGAAGGTCCTTCTCCAGTTCCAGGTTCACTTaGAGTTCCTCATACTCTTCAACAGCCAACATGGACACTCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DSAFLRRSFSSSRFT*SSSYSSTANMDTLL Trigger: CAACAGAGTGTCCATGTTGGCTGTTGAAGAGTATGAGGAACTGCAAGTGAACCTGGAACTGGAGAAGGACCTTCGCAAGAAAGCAGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | GGATATAAAATCAGCACTGACAGACAGGGAAAACAGTCAAGCCCATTGACCCTAACGTCTGGCCCCAGTTaGGCCATGTATAGCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GYKISTDRQGKQSSPLTLTSGPS*AMYSML Trigger: CAGCATGCTATACATGGCCAAACTGGGGCCAGACGT...TAGGGTCAATGGGCTTGACTGTTTTCCCTGTCTGTCAGTGCTGATTTTATATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS GCA 90 bp | TCTAAGATGAACTCCCTTCTTAATTCTGTCCATCATCTCTTCCACTaGTTGCCTCTTCAGGTCTGTGACTTCCTCAGCTGTCTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SKMNSLLNSVHHLFH*LPLQVCDFLSCLWL Trigger: CAGCCAGAGACAGCTGAGGAAGTCACAGACCTGAAGAGGCAAGCAGTGGAAGAGATGATGGACAGAATTAAGAAGGGAGTTCATCTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAACGTCTGGCCCCAGTTaGGCCATGTATAGCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MCGKTQLTHGTELVAYRGTSGPS*AMYSML Trigger: CAGCATGCTATACATGGCCAAACTGGGGCCAGACGT...TCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | GGATATAAAATCAGCACTGACAGACAGGGAAAACAGTCAAGCCCATTGACCCTAAGGGGACACGGGTTGTaGAATTCTGCCTCCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GYKISTDRQGKQSSPLTLRGHGL*NSASRV Trigger: AACTCTGGAGGCAGAATTCAACAACCCGTGTCCCCT...TAGGGTCAATGGGCTTGACTGTTTTCCCTGTCTGTCAGTGCTGATTTTATATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGGTTTGAGCGTCCCTCTAAGCCAATTCTCTGTTGATGCTGCCAAGACAAAAGACTCTGCTTTCTaGCGAAGGTCCTTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IQGLSVPLSQFSVDAAKTKDSAF*RRSFSS Trigger: ACTGGAGAAGGACCTTCGCAAGAAAGCAGAGTCTTT...TGTCTTGGCAGCATCAACAGAGAATTGGCTTAGAGGGACGCTCAAACCTTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | CATGCCCTAGGGCTTGGATTAAAGGGTGCCTTTAAGATAATTGTTAAGTTTGGTTGCTCTAGCTCCCTCTaGTCGTCTTCCAGAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HALGLGLKGAFKIIVKFGCSSSL*SSSRSS Trigger: GGAGCTTCTGGAAGACGACAAGAGGGAGCTAGAGCA...ACCAAACTTAACAATTATCTTAAAGGCACCCTTTAATCCAAGCCCTAGGGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | TGGTGTAAAATATGGTACTTGTGGCACGTGAATGTGTGGGAAAACACAGTTAACGCACTTTCTGAGCCCTaGAGAGAGTCTGGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: WCKIWYLWHVNVWENTVNALSEP*RESGFA Trigger: GGCAAAGCCAGACTCTCTCAAGGGCTCAGAAAGTGC...GTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS GCA 90 bp | TGGAAACAGGATCTAATACTACAACTGGCTCAGCTTGGTTTTCACTaGCCACACATTTTCTCCTGTATCCACCTTTACTGGGAGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: WKQDLILQLAQLGFH*PHIFSCIHLYWEAE Trigger: TTCAGCCTCCCAGTAAAGGTGGATACAGGAGAAAATGTGTGGGCAGTGAAAACCAAGCTGAGCCAGTTGTAGTATTAGATCCTGTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CAA 90 bp | TTCACCTCCCTCCTCCTCGAATTGAGTTGGGTCTTTTTCAGCAGCCTGGTCTTTAGCTTCATCTCGTTCTaGCCTAATTTTGTCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: FTSLLLELSWVFFSSLVFSFISF*PNFVTL Trigger: AAGTGTGACAAAATTAGGCAAGAACGAGATGAAGCT...AAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGAGGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | TTTTCTTTTGCCCTCAGGTGCAGAGCACCTGACAGCTACATGCCGAGTCATGCTCTGAACAGACACAATTaGATCTCGAAGTTCTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FSFALRCRAPDSYMPSHALNRHN*ISKFFD Trigger: ATCAAAGAACTTCGAGATCAAATTGTGTCTGTTCAG...AGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCTGAGGGCAAAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGACAGAAGCTCCAGCTGTaGTCTGAGGTTATGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: MCGKTQLTHGTELVAYRGQKLQL*SEVMDL Trigger: GAGATCCATAACCTCAGACAACAGCTGGAGCTTCTG...TCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGACCTCCTCGAATTGAGTaGGGTCTTTTTCAGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MCGKTQLTHGTELVAYRGPPRIE*GLFQQP Trigger: AGGCTGCTGAAAAAGACCCAACTCAATTCGAGGAGG...TCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CAA 90 bp | GACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTATATGGAGTATATTCGCCAATGGCTaGCTCCTTCAAGCTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: DPRDSCGPSFLYMFFIWSIFANG*LLQAGD Trigger: ATCACCAGCTTGAAGGAGCAAGCCATTGGCGAATAT...ACTCCATATAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | AATCTGCCAGCAGTTAGCATATTGTTTAGCAGTCTTATTCAGTCAGAGAAACACCATCTCTTCCACTGCTaGCCTCTTCAGGTCTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NLPAVSILFSSLIQSEKHHLFHC*PLQVCD Trigger: GTCACAGACCTGAAGAGGCAAGCAGTGGAAGAGATG...GTGTTTCTCTGACTGAATAAGACTGCTAAACAATATGCTAACTGCTGGCAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | CACGTGAATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTAAACACTGGCATGGACTaGGACTCTGAGGTGGCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: HVNVWENTVNSWNRTSSLNTGMD*DSEVAN Trigger: ATTAGCCACCTCAGAGTCCAAGTCCATGCCAGTGTT...TAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACATTCACGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CAA 90 bp | AAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAATCCCTGTTTCCCTCCTCCTCGAATaGAGTTGGGTCTTTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KTQLTHGTELVAYRGIPVSLLLE*SWVFFS Trigger: GCTGAAAAAGACCCAACTCAATTCGAGGAGGAGGGA...AACAGGGATTCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CAA 90 bp | AAAAACAATGTGTGCTTGTCACTTATCTTCACTGTGCGTGAGAGCTGGTGTAAAATATTCGCCAATGGCTaGCTCCTTCAAGCTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KNNVCLSLIFTVRESWCKIFANG*LLQAGD Trigger: ATCACCAGCTTGAAGGAGCAAGCCATTGGCGAATAT...TTTACACCAGCTCTCACGCACAGTGAAGATAAGTGACAAGCACACATTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS CCA 90 bp | GCCAAGGCTTCAGCGCTCTCTCGACATGTCTTCTCTATTTCAAGATaGTTCTGCATGAAATTCACCTCCTCTATAACCATATGTGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: AKASALSRHVFSISR*FCMKFTSSITICEI Trigger: AATTTCACATATGGTTATAGAGGAGGTGAATTTCATGCAGAACCATCTTGAAATAGAGAAGACATGTCGAGAGAGCGCTGAAGCCTTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | TGGAAACAGGATCTAATACTACAACTGGCTCAGCTTGGTTTTCACTGCCCACACTTCAATGAACATCTCTaGTGCAAAAGACTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WKQDLILQLAQLGFHCPHFNEHL*CKRLCF Trigger: AAAGCAGAGTCTTTTGCACAAGAGATGTTCATTGAA...GTGTGGGCAGTGAAAACCAAGCTGAGCCAGTTGTAGTATTAGATCCTGTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | CATGCCCTAGGGCTTGGATTAAAGGGTGCCTTTAAGATAATTGTTAAGTTTGGTCAGCAGAAGGTGGCTTaGTCTCTTCAGTTTGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HALGLGLKGAFKIIVKFGQQKVA*SLQFVL Trigger: CAAAACAAACTGAAGAGACAAAGCCACCTTCTGCTG...ACCAAACTTAACAATTATCTTAAAGGCACCCTTTAATCCAAGCCCTAGGGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | GACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTATATGGAGTCGTTCTTGCCTAATTTaGTCACACTTCTCCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: DPRDSCGPSFLYMFFIWSRSCLI*SHFSFV Trigger: AACAAAGGAGAAGTGTGACAAAATTAGGCAAGAACG...ACTCCATATAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTACCGAGGAAGCTTCATCTCGTTCTaGCCTAATTTTGTCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: MCGKTQLTHGTELVAYRGSFISF*PNFVTL Trigger: AAGTGTGACAAAATTAGGCAAGAACGAGATGAAGCT...TCCTCGGTAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | GAAGACCAGACCCCAGAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTACTGAACAGACACAATTaGATCTCGAAGTTCTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EDQTPETLAGLLFFICSLLNRHN*ISKFFD Trigger: ATCAAAGAACTTCGAGATCAAATTGTGTCTGTTCAG...TAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | GAGACTCTTGCGGGCCTTCTTTTCTTTATATGTTCTTTATATGGAGTTGTACTGCTCGAACTAGTGGATTaGTTAAGTGTCCCCAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: ETLAGLLFFICSLYGVVLLELVD*LSVPRI Trigger: AATCCTGGGGACACTTAACAAATCCACTAGTTCGAG...CAGTACAACTCCATATAAAGAACATATAAAGAAAAGAAGGCCCGCAAGAGTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CAA 90 bp | CACGTGAATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTAGCCTCCAGAGTTTTCTaGTTCAAGGCTGATTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HVNVWENTVNSWNRTSSLASRVF*FKADFV Trigger: AACAAAATCAGCCTTGAACAAGAAAACTCTGGAGGC...TAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACATTCACGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CAA 90 bp | CACGTGAATGTGTGGGAAAACACAGTTAACTCATGGAACAGAACTAGTAGCTTATGTTCAAGGCTGATTTaGTTACACTGGATACAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HVNVWENTVNSWNRTSSLCSRLI*LHWIQN Trigger: GTTCTGTATCCAGTGTAACAAAATCAGCCTTGAACA...TAAGCTACTAGTTCTGTTCCATGAGTTAACTGTGTTTTCCCACACATTCACGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS-3UTR CAA 90 bp | CATGCCCTAGGGCTTGGATTAAAGGGTGCCTTTAAGATAATTGTTAAGTTTGGTAACATGGACACTCTGTaGCATTTTTCTAAGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HALGLGLKGAFKIIVKFGNMDTL*HFSKTF Trigger: GAAAGTCTTAGAAAAATGCAACAGAGTGTCCATGTT...ACCAAACTTAACAATTATCTTAAAGGCACCCTTTAATCCAAGCCCTAGGGCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS-3UTR CAA 90 bp | TGGTGTAAAATATGGTACTTGTGGCACGTGAATGTGTGGGAAAACACAGTTAACTTCAATGAACATCTCTaGTGCAAAAGACTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WCKIWYLWHVNVWENTVNFNEHL*CKRLCF Trigger: AAAGCAGAGTCTTTTGCACAAGAGATGTTCATTGAA...GTTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS TCA 72 bp | GGCCAGGATTCCCTTCAGCTCATCCACCGCACTTTCTaGGCCCTTGAGAGAGTCTGGCTTTGCCTTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GQDSLQLIHRTF*ALERVWLCLGS Trigger: AGACCCAAGGCAAAGCCAGACTCTCTCAAGGGCTCAGAAAGTGCGGTGGATGAGCTGAAGGGAATCCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163821.3 |
||
| CDS TCA 72 bp | TTCCCTTCAGCTCATCCACCGCACTTTCTGAGCCCTTaGGAGAGTCTGGCTTTGCCTTGGGTCTGGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FPSAHPPHFLSP*ESLALPWVWLS Trigger: AGACAGCCAGACCCAAGGCAAAGCCAGACTCTCTCAAGGGCTCAGAAAGTGCGGTGGATGAGCTGAAGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS CAA 90 bp | CGGGCCTTCTCCTCCGAGCTCTGGTATTTCTGCTCTAGCTCCCTCTaGTCGTCTTCCAGAAGCTCCAGCTGTTGTCTGAGGTTATGGATC | + |
|
Preference number: 6 (lower is better) Translates to: RAFSSELWYFCSSSL*SSSRSSSCCLRLWI Trigger: GATCCATAACCTCAGACAACAGCTGGAGCTTCTGGAAGACGACAAGAGGGAGCTAGAGCAGAAATACCAGAGCTCGGAGGAGAAGGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS TCA 72 bp | CTCAGACTGGTTCACTCGCTTCTGAAGTTCATCCACTaGATGCTTCAGGTTCCGGGCCTTCTCCTCCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRLVHSLLKFIH*MLQVPGLLLRA Trigger: AGCTCGGAGGAGAAGGCCCGGAACCTGAAGCATTCAGTGGATGAACTTCAGAAGCGAGTGAACCAGTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS TCA 72 bp | GGAGGTACCGAATTCTCAGACTGGTTCACTCGCTTCTaGAGTTCATCCACTGAATGCTTCAGGTTCCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GGTEFSDWFTRF*SSSTECFRFRA Trigger: GGCCCGGAACCTGAAGCATTCAGTGGATGAACTTCAGAAGCGAGTGAACCAGTCTGAGAATTCGGTACCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS CAA 72 bp | GGCCCTTCACCTGGCTCAGGTGTTAGGGGACACGGGTaGTTGAATTCTGCCTCCAGAGTTTTCTTGTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GPSPGSGVRGHG*LNSASRVFLFK Trigger: CTTGAACAAGAAAACTCTGGAGGCAGAATTCAACAACCCGTGTCCCCTAACACCTGAGCCAGGTGAAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS TCA 72 bp | AGCTCCAGCTGTTGTCTGAGGTTATGGATCTCTTTGTaGAGTGCTTCATTCTCCAGCCGCTCCTCCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSCCLRLWISL*SASFSSRSSSS Trigger: AGAGCTGGAGGAGCGGCTGGAGAATGAAGCACTTCACAAAGAGATCCATAACCTCAGACAACAGCTGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS TCA 72 bp | CTTCACCTGGCTCAGGTGTTAGGGGACACGGGTTGTTaGATTCTGCCTCCAGAGTTTTCTTGTTCAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LHLAQVLGDTGC*ILPPEFSCSRL Trigger: CAGCCTTGAACAAGAAAACTCTGGAGGCAGAATTCAACAACCCGTGTCCCCTAACACCTGAGCCAGGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS CAA 72 bp | CCTTCACCTGGCTCAGGTGTTAGGGGACACGGGTTGTaGAATTCTGCCTCCAGAGTTTTCTTGTTCAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPGSGVRGHGL*NSASRVFLFKA Trigger: AGCCTTGAACAAGAAAACTCTGGAGGCAGAATTCAACAACCCGTGTCCCCTAACACCTGAGCCAGGTGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS GCA 72 bp | CAGCTGTTGTCTGAGGTTATGGATCTCTTTGTGAAGTaGTTCATTCTCCAGCCGCTCCTCCAGCTCTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: QLLSEVMDLFVK*FILQPLLQLFD Trigger: GTCAAAGAGCTGGAGGAGCGGCTGGAGAATGAAGCACTTCACAAAGAGATCCATAACCTCAGACAACAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS CCA 72 bp | CACACAGGTCTCAGCCGCAGCATCTGTGTCGGTGGCTaGGTCATCATCATCAATGTTTATCTCCTCTGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: HTGLSRSICVGG*VIIINVYLLCN Trigger: ATTACAGAGGAGATAAACATTGATGATGATGACCCAGCCACCGACACAGATGCTGCGGCTGAGACCTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS CAA 72 bp | GTTACACTGGATACAGAACCCAACACTGGCATGGACTaGGACTCTGAGGTGGCTAATATCCCGGTAGGACTA | + |
|
Preference number: 6 (lower is better) Translates to: VTLDTEPNTGMD*DSEVANIPVGL Trigger: TAGTCCTACCGGGATATTAGCCACCTCAGAGTCCAAGTCCATGCCAGTGTTGGGTTCTGTATCCAGTGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS CAA 90 bp | CTGTTCTCAGGGCCAAGGGATTTTAAGCTTCTCGAACTAGTGGATTaGTTAAGTGTCCCCAGGATTCCCTTCAGCTCATCCACCGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: LFSGPRDFKLLELVD*LSVPRIPFSSSTAL Trigger: AAGTGCGGTGGATGAGCTGAAGGGAATCCTGGGGACACTTAACAAATCCACTAGTTCGAGAAGCTTAAAATCCCTTGGCCCTGAGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS TCA 72 bp | GCCTTGGGTCTGGCTGTCTGGTTAACCGGTCTAAGATaGACTCCCTTCTTAATTCTGTCCATCATCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALGLAVWLTGLR*TPFLILSIISS Trigger: GGAAGAGATGATGGACAGAATTAAGAAGGGAGTTCATCTTAGACCGGTTAACCAGACAGCCAGACCCAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS GCA 72 bp | CCCTTCTTAATTCTGTCCATCATCTCTTCCACTGCTTaGCTCTTCAGGTCTGTGACTTCCTCAGCTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PFLILSIISSTA*LFRSVTSSAVS Trigger: AGAGACAGCTGAGGAAGTCACAGACCTGAAGAGGCAAGCAGTGGAAGAGATGATGGACAGAATTAAGAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
||
| CDS CAA 72 bp | GGGCCAAGGGATTTTAAGCTTCTCGAACTAGTGGATTaGTTAAGTGTCCCCAGGATTCCCTTCAGCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: GPRDFKLLELVD*LSVPRIPFSSS Trigger: GGATGAGCTGAAGGGAATCCTGGGGACACTTAACAAATCCACTAGTTCGAGAAGCTTAAAATCCCTTGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
||
| CDS CAA 90 bp | AAGATGAACTCCCTTCTTAATTCTGTCCATCATCTCTTCCACTGCTaGCCTCTTCAGGTCTGTGACTTCCTCAGCTGTCTCTGGCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: KMNSLLNSVHHLFHC*PLQVCDFLSCLWLS Trigger: ACTCAGCCAGAGACAGCTGAGGAAGTCACAGACCTGAAGAGGCAAGCAGTGGAAGAGATGATGGACAGAATTAAGAAGGGAGTTCATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| CDS CAA 90 bp | GCTGATTTTGTTACACTGGATACAGAACCCAACACTGGCATGGACTaGGACTCTGAGGTGGCTAATATCCCGGTAGGACTACTGCTATCT | + |
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Preference number: 6 (lower is better) Translates to: ADFVTLDTEPNTGMD*DSEVANIPVGLLLS Trigger: AGATAGCAGTAGTCCTACCGGGATATTAGCCACCTCAGAGTCCAAGTCCATGCCAGTGTTGGGTTCTGTATCCAGTGTAACAAAATCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
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| CDS CAA 72 bp | TTATTTACCTCCTCCATCACCTCCCCGAGTTTGCTCTaGAGGTTTTCCAGCTCGATGGCTAACACCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LFTSSITSPSLL*RFSSSMANTFF Trigger: AAAGAAGGTGTTAGCCATCGAGCTGGAAAACCTCAAGAGCAAACTCGGGGAGGTGATGGAGGAGGTAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| CDS CAA 72 bp | TTAACTTTATTTACCTCCTCCATCACCTCCCCGAGTTaGCTCTTGAGGTTTTCCAGCTCGATGGCTAACACC | + |
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Preference number: 6 (lower is better) Translates to: LTLFTSSITSPS*LLRFSSSMANT Trigger: GGTGTTAGCCATCGAGCTGGAAAACCTCAAGAGCAAACTCGGGGAGGTGATGGAGGAGGTAAATAAAGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| CDS TCA 72 bp | ACACATTTTCTCCTGTATCCACCTTTACTGGGAGGCTaGAAGGTAACCTTGGGATTCGTGCATCCTTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: THFLLYPPLLGG*KVTLGFVHPSN Trigger: ATTGGAAGGATGCACGAATCCCAAGGTTACCTTTCAGCCTCCCAGTAAAGGTGGATACAGGAGAAAATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047511.15 |
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| CDS CAA 72 bp | TCAATGAACATCTCTTGTGCAAAAGACTCTGCTTTCTaGCGAAGGTCCTTCTCCAGTTCCAGGTTCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: SMNISCAKDSAF*RRSFSSSRFTC Trigger: GCAAGTGAACCTGGAACTGGAGAAGGACCTTCGCAAGAAAGCAGAGTCTTTTGCACAAGAGATGTTCATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| CDS GCA 72 bp | GTTTTGTTCAATGAACATCTCTTGTGCAAAAGACTCTaGTTTCTTGCGAAGGTCCTTCTCCAGTTCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: VLFNEHLLCKRL*FLAKVLLQFQV Trigger: AACCTGGAACTGGAGAAGGACCTTCGCAAGAAAGCAGAGTCTTTTGCACAAGAGATGTTCATTGAACAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| CDS CCA 72 bp | TCAGCGCTCTCTCGACATGTCTTCTCTATTTCAAGATaGTTCTGCATGAAATTCACCTCCTCTATAACCATA | + |
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Preference number: 6 (lower is better) Translates to: SALSRHVFSISR*FCMKFTSSITI Trigger: TATGGTTATAGAGGAGGTGAATTTCATGCAGAACCATCTTGAAATAGAGAAGACATGTCGAGAGAGCGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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| CDS CAA 72 bp | ATGTTTATCTCCTCTGTAATTACGTCTGGCCCCAGTTaGGCCATGTATAGCATGCTGATTCTTTTCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: MFISSVITSGPS*AMYSMLILFSV Trigger: AACACTGAAAAGAATCAGCATGCTATACATGGCCAAACTGGGGCCAGACGTAATTACAGAGGAGATAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047511.15 ENSMUST00000163821.3 |
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