Pregenerated sensors for SHROOM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018387Ensembl transcript IDs: ENSMUST00000018531.12, ENSMUST00000093114.5, ENSMUST00000109013.9
Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGGCCTTGGAGGCCAGCAGCACACAATAGGAGCGCAGATGCTCTaGGGGCAGCTCCCGCTCCAACACCTGACGCAGGGTTTGCTCCCG | + |
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Preference number: 1 (lower is better) Translates to: PGLGGQQHTIGAQML*GQLPLQHLTQGLLP Trigger: CGGGAGCAAACCCTGCGTCAGGTGTTGGAGCGGGAGCTGCCCGCAGAGCATCTGCGCTCCTATTGTGTGCTGCTGGCCTCCAAGGCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR CCA 90 bp | TGCTCCTTCAGCTCCTTAGCTTCTTCTTGCTGTCGCTGCAGAAGTTaGAGTCGCTGCAGCAGAGAGGCCTGGAACCACCGGGAGAGGGCG | + |
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Preference number: 1 (lower is better) Translates to: CSFSSLASSCCRCRS*SRCSREAWNHRERA Trigger: CGCCCTCTCCCGGTGGTTCCAGGCCTCTCTGCTGCAGCGACTCCAACTTCTGCAGCGACAGCAAGAAGAAGCTAAGGAGCTGAAGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR TCA 90 bp | AGAGGACGGATTGCTGGGGCCCAGGTCAGTCTGGGAGAAAGGGGATaGTGGCTGAGGTCGCTCCAGATAGTGTCCAGTTGGTCCTTAAGG | + |
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Preference number: 1 (lower is better) Translates to: RGRIAGAQVSLGERG*WLRSLQIVSSWSLR Trigger: CCTTAAGGACCAACTGGACACTATCTGGAGCGACCTCAGCCATCATCCCCTTTCTCCCAGACTGACCTGGGCCCCAGCAATCCGTCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR CCA 90 bp | AAGGTCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTaGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAA | + |
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Preference number: 1 (lower is better) Translates to: KVTGEHRGKMCPRKA*SDSSLLPQGKALYK Trigger: TTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| 3UTR CCA 90 bp | ATAAAACCCAGGTCCTCTGGCAGAACAGCACGTGATCTTAACTGCTaGTCCATCTCTTCACACACACACACACCCCCAACCCTGTATCCC | + |
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Preference number: 1 (lower is better) Translates to: IKPRSSGRTARDLNC*SISSHTHTPPTLYP Trigger: GGGATACAGGGTTGGGGGTGTGTGTGTGTGTGAAGAGATGGACCAGCAGTTAAGATCACGTGCTGTTCTGCCAGAGGACCTGGGTTTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR GCA 90 bp | GAAATAAAACCCAGGTCCTCTGGCAGAACAGCACGTGATCTTAACTaGTGGTCCATCTCTTCACACACACACACACCCCCAACCCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: EIKPRSSGRTARDLN*WSISSHTHTPPTLY Trigger: ATACAGGGTTGGGGGTGTGTGTGTGTGTGAAGAGATGGACCAGCAGTTAAGATCACGTGCTGTTCTGCCAGAGGACCTGGGTTTTATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR TCA 90 bp | TACTGCAGTTTTTACGACCCACAAATTCCCAAAGAATTACAAACTTaGATAAGGTCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: YCSFYDPQIPKELQT*IRSQENTVGRCVLG Trigger: TCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGGTCGTAAAAACTGCAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| 3UTR GCA 90 bp | TATTTATTTGTTTATTTAGGGGTGTTGTGCCTGCATGTATGTCTGTaGATTACCTGTGTGCAAACCAGAGAGTGTCAGATTCCCTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: YLFVYLGVLCLHVCL*ITCVQTRECQIPWN Trigger: GTTCCAGGGAATCTGACACTCTCTGGTTTGCACACAGGTAATGCACAGACATACATGCAGGCACAACACCCCTAAATAAACAAATAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGCGCAGATGCTCTGCGGGCAGCTCCCGCTCCAACACCTGACGCAGGGTTTGTGCAGCAGAGAGGCCTaGAACCACCGGGAGAGGGCG | + |
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Preference number: 2 (lower is better) Translates to: GAQMLCGQLPLQHLTQGLCSREA*NHRERA Trigger: CGCCCTCTCCCGGTGGTTCCAGGCCTCTCTGCTGCA...CAAACCCTGCGTCAGGTGTTGGAGCGGGAGCTGCCCGCAGAGCATCTGCGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGCGCCCCAGTTGTGGGTaGGCCTGGGACAATGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GKMCPRKAWSDSSLLPQGRPSCG*AWDNVP Trigger: GGGAACATTGTCCCAGGCTCACCCACAACTGGGGCG...CCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| 3UTR CAA 90 bp | GTGCTCCTTCAGCTCCTTAGCTTCTTCTTGCTGTCGCTGCAGAAGTaGGAGTCGCTGCAGCAGAGAGGCCTGGAACCACCGGGAGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: VLLQLLSFFLLSLQK*ESLQQRGLEPPGEG Trigger: GCCCTCTCCCGGTGGTTCCAGGCCTCTCTGCTGCAGCGACTCCAACTTCTGCAGCGACAGCAAGAAGAAGCTAAGGAGCTGAAGGAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR-3UTR CCA 90 bp | GTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTGCTGTGACAGGATCCTaGCCTTGGAGGCCAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: VLGRPGLTPPYSLKGKLSAVTGS*PWRPAA Trigger: TGCTGCTGGCCTCCAAGGCCAGGATCCTGTCACAGC...AGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR-3UTR CCA 90 bp | GGTCCATCTCTTCACACACACACACACCCCCAACCCTGTATCCCCAACTCCCACTGTCCTAGGAAGGCCTaGTCTGACTCCTCCCTACTC | + |
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Preference number: 2 (lower is better) Translates to: GPSLHTHTHPQPCIPNSHCPRKA*SDSSLL Trigger: GAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACA...GTGGGAGTTGGGGATACAGGGTTGGGGGTGTGTGTGTGTGTGAAGAGATGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR-3UTR TCA 90 bp | ACAAACTTGAATAAGGTCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGCGCCCCAGTTGTGGGTaGGCCTGGGACAATGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: TNLNKVTGEHRGKMCPRKRPSCG*AWDNVP Trigger: GGGAACATTGTCCCAGGCTCACCCACAACTGGGGCG...CTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTTCCTGTCCTAGGAAGGCCTaGTCTGACTCCTCCCTACTC | + |
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Preference number: 2 (lower is better) Translates to: KALYKASPQLWVSLGQCSCPRKA*SDSSLL Trigger: GAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACA...GGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| 3UTR-3UTR TCA 90 bp | AGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCACCAGGCCAGGCTTTaGATACTGCAGTTTTTACGA | + |
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Preference number: 2 (lower is better) Translates to: RCVLGRPGLTPPYSLKGKHQARL*ILQFLR Trigger: TCGTAAAAACTGCAGTATTCAAAGCCTGGCCTGGTG...CTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTTCCCCTAACCCGAAACCCTaGAGCCCTCTTTTTACGTCT | + |
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Preference number: 2 (lower is better) Translates to: KALYKASPQLWVSLGQCSPNPKP*SPLFTS Trigger: AGACGTAAAAAGAGGGCTGCAGGGTTTCGGGTTAGG...GGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR-3UTR GCA 90 bp | CCCACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGTGGCCCCTCCAAACCCTaGTCTTCCCCCAACCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: PTNSQRITNLNKVTGEHRGPSKP*SSPNLN Trigger: GTTGAGGTTGGGGGAAGAGCAGGGTTTGGAGGGGCC...ACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR CAA 90 bp | GCTTCCCATATAGCGGGGAGTACAGCTACACCACCAGGCCAGGCTTaGAATACTGCAGTTTTTACGACCCACAAATTCCCAAAGAATTAC | + |
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Preference number: 2 (lower is better) Translates to: ASHIAGSTATPPGQA*NTAVFTTHKFPKNY Trigger: GTAATTCTTTGGGAATTTGTGGGTCGTAAAAACTGCAGTATTCAAAGCCTGGCCTGGTGGTGTAGCTGTACTCCCCGCTATATGGGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR-3UTR CCA 90 bp | ACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGTGGGTGTCCTAGGAAGGCCTaGTCTGACTCCTCCCTACTC | + |
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Preference number: 2 (lower is better) Translates to: TNSQRITNLNKVTGEHRGCPRKA*SDSSLL Trigger: GAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACA...CCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| 3UTR TCA 72 bp | CGCAGATGCTCTGCGGGCAGCTCCCGCTCCAACACCTaGCGCAGGGTTTGCTCCCGCCGAGCCACGTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: RRCSAGSSRSNT*RRVCSRRATCS Trigger: GGAGCACGTGGCTCGGCGGGAGCAAACCCTGCGTCAGGTGTTGGAGCGGGAGCTGCCCGCAGAGCATCTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR GCA 72 bp | GGAGGCCAGCAGCACACAATAGGAGCGCAGATGCTCTaGGGGCAGCTCCCGCTCCAACACCTGACGCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: GGQQHTIGAQML*GQLPLQHLTQG Trigger: ACCCTGCGTCAGGTGTTGGAGCGGGAGCTGCCCGCAGAGCATCTGCGCTCCTATTGTGTGCTGCTGGCCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR GCA 72 bp | GCTTCTTCTTGCTGTCGCTGCAGAAGTTGGAGTCGCTaGAGCAGAGAGGCCTGGAACCACCGGGAGAGGGCG | + |
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Preference number: 3 (lower is better) Translates to: ASSCCRCRSWSR*SREAWNHRERA Trigger: CGCCCTCTCCCGGTGGTTCCAGGCCTCTCTGCTGCAGCGACTCCAACTTCTGCAGCGACAGCAAGAAGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR-3UTR CAA 90 bp | ATTCGATCGTCCAGGCTGCGCTGCTGTGACAGGATCCTGGCCTTGGAGGCCAGCAAAGCATCGCCCCAGTaGTGGGTGAGCCTGGGACAA | + |
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Preference number: 3 (lower is better) Translates to: IRSSRLRCCDRILALEASKASPQ*WVSLGQ Trigger: TTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTT...GCTGGCCTCCAAGGCCAGGATCCTGTCACAGCAGCGCAGCCTGGACGATCGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR GCA 72 bp | TCCTTAAGGAACCGGATTCGATCGTCCAGGCTGCGCTaGTGTGACAGGATCCTGGCCTTGGAGGCCAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: SLRNRIRSSRLR*CDRILALEASS Trigger: GCTGCTGGCCTCCAAGGCCAGGATCCTGTCACAGCAGCGCAGCCTGGACGATCGAATCCGGTTCCTTAAGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR CCA 72 bp | TTCGATCGTCCAGGCTGCGCTGCTGTGACAGGATCCTaGCCTTGGAGGCCAGCAGCACACAATAGGAGCGCA | + |
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Preference number: 3 (lower is better) Translates to: FDRPGCAAVTGS*PWRPAAHNRSA Trigger: TGCGCTCCTATTGTGTGCTGCTGGCCTCCAAGGCCAGGATCCTGTCACAGCAGCGCAGCCTGGACGATCGAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR TCA 72 bp | ATTGCTGGGGCCCAGGTCAGTCTGGGAGAAAGGGGATaGTGGCTGAGGTCGCTCCAGATAGTGTCCAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: IAGAQVSLGERG*WLRSLQIVSSW Trigger: CCAACTGGACACTATCTGGAGCGACCTCAGCCATCATCCCCTTTCTCCCAGACTGACCTGGGCCCCAGCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR-3UTR CAA 90 bp | AGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGAAAGCATCGCCCCAGTaGTGGGTGAGCCTGGGACAA | + |
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Preference number: 3 (lower is better) Translates to: RCVLGRPGLTPPYSLKGKKASPQ*WVSLGQ Trigger: TTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTT...CTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| 3UTR GCA 72 bp | TGCTCCTTCAGCTCCTTAGCTTCTTCTTGCTGTCGCTaGAGAAGTTGGAGTCGCTGCAGCAGAGAGGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: CSFSSLASSCCR*RSWSRCSREAW Trigger: CCAGGCCTCTCTGCTGCAGCGACTCCAACTTCTGCAGCGACAGCAAGAAGAAGCTAAGGAGCTGAAGGAGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| 3UTR CCA 72 bp | GGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTaGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: GEHRGKMCPRKA*SDSSLLPQGKA Trigger: AGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| 3UTR GCA 72 bp | CCCAGGTCCTCTGGCAGAACAGCACGTGATCTTAACTaGTGGTCCATCTCTTCACACACACACACACCCCCA | + |
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Preference number: 3 (lower is better) Translates to: PRSSGRTARDLN*WSISSHTHTPP Trigger: TGGGGGTGTGTGTGTGTGTGAAGAGATGGACCAGCAGTTAAGATCACGTGCTGTTCTGCCAGAGGACCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR CCA 72 bp | CAAGGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTaGGTGAGCCTGGGACAATGTTCCCACCTCCGCTAC | + |
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Preference number: 3 (lower is better) Translates to: QGKALYKASPQL*VSLGQCSHLRY Trigger: GTAGCGGAGGTGGGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| 3UTR TCA 72 bp | GGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTaGGCCTGGGACAATGTTCCCACCTCCGCTACATGT | + |
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Preference number: 3 (lower is better) Translates to: GKLSIKHRPSCG*AWDNVPTSATC Trigger: ACATGTAGCGGAGGTGGGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGCATTACCTGTGTGCAAACCAGAGAGTGTCAGATTCCCTGGAACTGGAGAAAGCATCGCCCCAGTaGTGGGTGAGCCTGGGACAA | + |
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Preference number: 3 (lower is better) Translates to: SVHYLCANQRVSDSLELEKASPQ*WVSLGQ Trigger: TTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTT...CTCCAGTTCCAGGGAATCTGACACTCTCTGGTTTGCACACAGGTAATGCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR CCA 72 bp | TGTGTGCAAACCAGAGAGTGTCAGATTCCCTGGAACTaGAGTTACAGACGGGTGTGGGCCATATACCATAGA | + |
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Preference number: 3 (lower is better) Translates to: CVQTRECQIPWN*SYRRVWAIYHR Trigger: TCTATGGTATATGGCCCACACCCGTCTGTAACTCCAGTTCCAGGGAATCTGACACTCTCTGGTTTGCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR CCA 72 bp | ATTACCTGTGTGCAAACCAGAGAGTGTCAGATTCCCTaGAACTGGAGTTACAGACGGGTGTGGGCCATATAC | + |
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Preference number: 3 (lower is better) Translates to: ITCVQTRECQIP*NWSYRRVWAIY Trigger: GTATATGGCCCACACCCGTCTGTAACTCCAGTTCCAGGGAATCTGACACTCTCTGGTTTGCACACAGGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR-3UTR CAA 90 bp | CTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGTTTTTACGTCTTATTTaGAGGGAGAGTCTCCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: LPQGKALYKASPQLWVSLFLRLI*RESLLS Trigger: ACTTAGGAGACTCTCCCTCAAAATAAGACGTAAAAA...CAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR GCA 72 bp | GAGTACAGCTACACCACCAGGCCAGGCTTTGAATACTaGAGTTTTTACGACCCACAAATTCCCAAAGAATTA | + |
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Preference number: 3 (lower is better) Translates to: EYSYTTRPGFEY*SFYDPQIPKEL Trigger: TAATTCTTTGGGAATTTGTGGGTCGTAAAAACTGCAGTATTCAAAGCCTGGCCTGGTGGTGTAGCTGTACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR GCA 72 bp | GTTTATTTAGGGGTGTTGTGCCTGCATGTATGTCTGTaGATTACCTGTGTGCAAACCAGAGAGTGTCAGATT | + |
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Preference number: 3 (lower is better) Translates to: VYLGVLCLHVCL*ITCVQTRECQI Trigger: AATCTGACACTCTCTGGTTTGCACACAGGTAATGCACAGACATACATGCAGGCACAACACCCCTAAATAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| 3UTR TCA 72 bp | TTTTACGACCCACAAATTCCCAAAGAATTACAAACTTaGATAAGGTCACAGGAGAACACCGTGGGAAGATGT | + |
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Preference number: 3 (lower is better) Translates to: FYDPQIPKELQT*IRSQENTVGRC Trigger: ACATCTTCCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGGTCGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR GCA 90 bp | ATTCGATCGTCCAGGCTGCGCTGCTGTGACAGGATCCTGGCCTTGGAGGCCAGCAAGTCGCGTGGGGACTaGGGGACGCAGGCGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: IRSSRLRCCDRILALEASKSRGD*GTQAAR Trigger: CCGGGCCGCCTGCGTCCCGCAGTCCCCACGCGACTT...GCTGGCCTCCAAGGCCAGGATCCTGTCACAGCAGCGCAGCCTGGACGATCGAAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| CDS-3UTR GCA 90 bp | TGCTTCCCGGATGATCCGGGCGGTAGAAGGAAGGCCCCTCCAAACCCTGCTCTTGCGCTGGGACAGCGGTaGGCGCCGGCTCCTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: CFPDDPGGRRKAPPNPALALGQR*APAPLL Trigger: GAGAAGAGGAGCCGGCGCGCACCGCTGTCCCAGCGC...AAGAGCAGGGTTTGGAGGGGCCTTCCTTCTACCGCCCGGATCATCCGGGAAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| CDS-3UTR GCA 90 bp | ATCCGGGCGGTAGAAGGAAGGCCCCTCCAAACCCTGCTCTTCCCCCAACCTCAACCATCCAGCAGGCCCTaGGGTGGCTCTGGACCGGGC | + |
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Preference number: 4 (lower is better) Translates to: IRAVEGRPLQTLLFPQPQPSSRP*GGSGPG Trigger: GCCCGGTCCAGAGCCACCGCAGGGCCTGCTGGATGG...TTGAGGTTGGGGGAAGAGCAGGGTTTGGAGGGGCCTTCCTTCTACCGCCCGGAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| CDS-3UTR CCA 90 bp | GTGGAGGCAGACCTCCCCCAACCCTGTATACCTAACCCGAAACCCTGCAGCCCTCCAGCTCCTGGCTGCTaGAGGCGGAGCGCACGTGCG | + |
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Preference number: 4 (lower is better) Translates to: VEADLPQPCIPNPKPCSPPAPGC*RRSARA Trigger: CGCACGTGCGCTCCGCCTCCAGCAGCCAGGAGCTGG...AGGGCTGCAGGGTTTCGGGTTAGGTATACAGGGTTGGGGGAGGTCTGCCTCCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| CDS-3UTR GCA 90 bp | GAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACAAGTCGCGTGGGGACTaGGGGACGCAGGCGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: ENTVGRCVLGRPGLTPPYKSRGD*GTQAAR Trigger: CCGGGCCGCCTGCGTCCCGCAGTCCCCACGCGACTT...GTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CCA 90 bp | GGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGCCGTGGGAAGTCGCGTaGGGACTGCGGGACGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GKMCPRKAWSDSSLLPQGPWEVA*GLRDAG Trigger: GCCTGCGTCCCGCAGTCCCCACGCGACTTCCCACGG...CCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CCA 90 bp | TGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCCAGCAGGCCCTGCGGTaGCTCTGGACCGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPRKAWSDSSLLPQGKALQQALR*LWTGLG Trigger: GCCCAGCCCGGTCCAGAGCCACCGCAGGGCCTGCTG...GAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACCCGTGGGAAGTCGCGTaGGGACTGCGGGACGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ENTVGRCVLGRPGLTPPYPWEVA*GLRDAG Trigger: GCCTGCGTCCCGCAGTCCCCACGCGACTTCCCACGG...GTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCAGCTCCTGGCTGCTaGAGGCGGAGCGCACGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: EHRGKMCPRKAWSDSSLLPAPGC*RRSARA Trigger: CGCACGTGCGCTCCGCCTCCAGCAGCCAGGAGCTGG...GAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | AGGTCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCAGCAGGCCCTGCGGTaGCTCTGGACCGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSQENTVGRCVLGRPGLTQQALR*LWTGLG Trigger: GCCCAGCCCGGTCCAGAGCCACCGCAGGGCCTGCTG...AGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCCAGCAGGCCCTGCGGTaGCTCTGGACCGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLTPPYSLKGKLSIKHRPQQALR*LWTGLG Trigger: GCCCAGCCCGGTCCAGAGCCACCGCAGGGCCTGCTG...GGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | ATTCGATCGTCCAGGCTGCGCTGCTGTGACAGGATCCTGGCCTTGGAGGCCAGCGCCGGTAGGAGGTGCTaGTGGGGAGCCCTTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IRSSRLRCCDRILALEASAGRRC*WGALGN Trigger: ATTCCCAAGGGCTCCCCACCAGCACCTCCTACCGGC...GCTGGCCTCCAAGGCCAGGATCCTGTCACAGCAGCGCAGCCTGGACGATCGAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
||
| CDS-3UTR TCA 90 bp | GGAGTCGCTGCAGCAGAGAGGCCTGGAACCACCGGGAGAGGGCGCAGTGAACACCGGATGTCTGCTCTTTaGGGAACAGCCTGGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVAAAERPGTTGRGRSEHRMSAL*GTAWTV Trigger: CACTGTCCAGGCTGTTCCTCAAAGAGCAGACATCCG...GTGTTCACTGCGCCCTCTCCCGGTGGTTCCAGGCCTCTCTGCTGCAGCGACTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
||
| CDS-3UTR GCA 90 bp | AGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGGCGCTGGGACAGCGGTaGGCGCCGGCTCCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RCVLGRPGLTPPYSLKGKALGQR*APAPLL Trigger: GAGAAGAGGAGCCGGCGCGCACCGCTGTCCCAGCGC...CTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | GGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGGGAGCGCAGATGCTCTaGGGGCAGCTCCCGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GKMCPRKAWSDSSLLPQGGAQML*GQLPLQ Trigger: TTGGAGCGGGAGCTGCCCGCAGAGCATCTGCGCTCC...CCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGCCGTGGGAAGTCGCGTaGGGACTGCGGGACGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPQGKALYKASPQLWVSLPWEVA*GLRDAG Trigger: GCCTGCGTCCCGCAGTCCCCACGCGACTTCCCACGG...CAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | CCCGCTCCAACACCTGACGCAGGGTTTGCTCCCGCCGAGCCACGTGCTCCTTCATCCTGCAGCATCTTTTaGAGGAGGCGGGCTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAPTPDAGFAPAEPRAPSSCSIF*RRRASS Trigger: GGAACTAGCCCGCCTCCTCCAAAAGATGCTGCAGGA...TGAAGGAGCACGTGGCTCGGCGGGAGCAAACCCTGCGTCAGGTGTTGGAGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
||
| CDS-3UTR TCA 90 bp | TGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCCAGGCTTTCAGTGGCTaGGGCCTGGGAGGTGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CPRKAWSDSSLLPQGKALQAFSG*GLGGAV Trigger: GACCGCACCTCCCAGGCCTCAGCCACTGAAAGCCTG...GAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTCCATCCAGCAGGCCCTaGGGTGGCTCTGGACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKALYKASPQLWVSLGQCPSSRP*GGSGPG Trigger: GCCCGGTCCAGAGCCACCGCAGGGCCTGCTGGATGG...ACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCCATCCAGCAGGCCCTaGGGTGGCTCTGGACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRPGLTPPYSLKGKLSIKPSSRP*GGSGPG Trigger: GCCCGGTCCAGAGCCACCGCAGGGCCTGCTGGATGG...CTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | GTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTACTGCCGGTAGGAGGTaGTGGTGGGGAGCCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGRPGLTPPYSLKGKLSTAGRR*WWGALG Trigger: CCCAAGGGCTCCCCACCAGCACCTCCTACCGGCAGT...AGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCTCTTCTCCCAGCTCCTaGCTGCTGGAGGCGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EHRGKMCPRKAWSDSSLLSSPSS*LLEAER Trigger: GCGCTCCGCCTCCAGCAGCCAGGAGCTGGGAGAAGA...GAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTATCTTCTCCCAGCTCCTaGCTGCTGGAGGCGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GEHRGKMCPRKAWSDSSLSSPSS*LLEAER Trigger: GCGCTCCGCCTCCAGCAGCCAGGAGCTGGGAGAAGA...TAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTTCCGCGCTGGGACAGCGGTaGGCGCCGGCTCCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KALYKASPQLWVSLGQCSALGQR*APAPLL Trigger: GAGAAGAGGAGCCGGCGCGCACCGCTGTCCCAGCGC...GGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGGGAGCGCAGATGCTCTaGGGGCAGCTCCCGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPYSLKGKLSIKHRPSCGGAQML*GQLPLQ Trigger: TTGGAGCGGGAGCTGCCCGCAGAGCATCTGCGCTCC...CCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | AGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGACTGCCGGTAGGAGGTaGTGGTGGGGAGCCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCVLGRPGLTPPYSLKGKTAGRR*WWGALG Trigger: CCCAAGGGCTCCCCACCAGCACCTCCTACCGGCAGT...CTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAGCTTCCCTGGACCTCTaGGGACCGTGGGTCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRCVLGRPGLTPPYSLKGASLDL*GPWVTV Trigger: CACAGTGACCCACGGTCCCCAGAGGTCCAGGGAAGC...TCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | ATCCGGGCGGTAGAAGGAAGGCCCCTCCAAACCCTGCTCTTCCCCCAACCTCAACGAAACTCCTTTCGCTaGAAGGACGTCTCCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRAVEGRPLQTLLFPQPQRNSFR*KDVSRS Trigger: GCTGCGGGAGACGTCCTTCCAGCGAAAGGAGTTTCG...TTGAGGTTGGGGGAAGAGCAGGGTTTGGAGGGGCCTTCCTTCTACCGCCCGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| CDS-3UTR CCA 90 bp | AAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTTCCCCAGCTCCTGGCTGCTaGAGGCGGAGCGCACGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KALYKASPQLWVSLGQCSPAPGC*RRSARA Trigger: CGCACGTGCGCTCCGCCTCCAGCAGCCAGGAGCTGG...GGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CCA 90 bp | GTGGAGGCAGACCTCCCCCAACCCTGTATACCTAACCCGAAACCCTGCAGCCCTCGACCCGCAGGTCTATaGGCATTGCCAAGATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VEADLPQPCIPNPKPCSPRPAGL*ALPRSA Trigger: AGCGGATCTTGGCAATGCCCATAGACCTGCGGGTCG...AGGGCTGCAGGGTTTCGGGTTAGGTATACAGGGTTGGGGGAGGTCTGCCTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTCAGGCTTTCAGTGGCTaGGGCCTGGGAGGTGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKALYKASPQLWVSLGQCQAFSG*GLGGAV Trigger: GACCGCACCTCCCAGGCCTCAGCCACTGAAAGCCTG...ACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR TCA 90 bp | GGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGCCTTGCAGGGACCCATaGCCTCGCCTGAAACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKMCPRKAWSDSSLLPQGPCRDP*PRLKHS Trigger: AGAGTGTTTCAGGCGAGGTCATGGGTCCCTGCAAGG...CCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTAGTCAGGGAAGTGTGGTaGGGGGACCCTGGAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GEHRGKMCPRKAWSDSSLVREVW*GDPGVS Trigger: TGAGACTCCAGGGTCCCCTCACCACACTTCCCTGAC...TAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR TCA 90 bp | GGAGTCGCTGCAGCAGAGAGGCCTGGAACCACCGGGAGAGGGCGCAGTGAACACAGAGTTTTCAGACCTTaGTGCCTCTTGGGAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVAAAERPGTTGRGRSEHRVFRP*CLLGSL Trigger: CAGACTTCCCAAGAGGCATCAAGGTCTGAAAACTCT...GTGTTCACTGCGCCCTCTCCCGGTGGTTCCAGGCCTCTCTGCTGCAGCGACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
||
| CDS-3UTR GCA 90 bp | GGAGAGTCTCCTAAGTTGTCCAGGCTGGCTTTGAGTTCCCTTTGTAGCCCGGATCGGGCTGGGCGGCTCTaGGGTGTGAGCTGTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GESPKLSRLALSSLCSPDRAGRL*GVSCSF Trigger: GAAGCTACAGCTCACACCGCAGAGCCGCCCAGCCCG...ATCCGGGCTACAAAGGGAACTCAAAGCCAGCCTGGACAACTTAGGAGACTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | AACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCGAGCCGTTCACCGCTTaGCCACAGTCCTCTGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: NTVGRCVLGRPGLTPPYSEPFTA*PQSSVP Trigger: GGGTACAGAGGACTGTGGGCAAGCGGTGAACGGCTC...GGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCTCAGTGGCTGAGGCCTaGGAGGTGCGGTCTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLTPPYSLKGKLSIKHRPSVAEA*EVRSLP Trigger: TGGGAGAGACCGCACCTCCCAGGCCTCAGCCACTGA...GGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | AACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCAGTCCAGGCTTTCAGTaGCTGAGGCCTGGGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTVGRCVLGRPGLTPPYSSPGFQ*LRPGRC Trigger: GCACCTCCCAGGCCTCAGCCACTGAAAGCCTGGACT...GGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | TCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTGCTTCCCTGGACCTCTaGGGACCGTGGGTCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQENTVGRCVLGRPGLTPASLDL*GPWVTV Trigger: CACAGTGACCCACGGTCCCCAGAGGTCCAGGGAAGC...AGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGTCTCCTAAGTTGTCCAGGCTGGCTTTGAGTTCCCTTTGTAGCCCGGATTCTTCTCCCAGCTCCTaGCTGCTGGAGGCGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GESPKLSRLALSSLCSPDSSPSS*LLEAER Trigger: GCGCTCCGCCTCCAGCAGCCAGGAGCTGGGAGAAGA...ATCCGGGCTACAAAGGGAACTCAAAGCCAGCCTGGACAACTTAGGAGACTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | GTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTCCTTGCAGGGACCCATaGCCTCGCCTGAAACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGRPGLTPPYSLKGKLSPCRDP*PRLKHS Trigger: AGAGTGTTTCAGGCGAGGTCATGGGTCCCTGCAAGG...AGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | AGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGGTCAGGGAAGTGTGGTaGGGGGACCCTGGAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCVLGRPGLTPPYSLKGKVREVW*GDPGVS Trigger: TGAGACTCCAGGGTCCCCTCACCACACTTCCCTGAC...CTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGTCAGGGAAGTGTGGTaGGGGGACCCTGGAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPQGKALYKASPQLWVSLVREVW*GDPGVS Trigger: TGAGACTCCAGGGTCCCCTCACCACACTTCCCTGAC...CAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | AACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCGAATTCCTGGCCACTTaGTTGGTCAGGGTCGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTVGRCVLGRPGLTPPYSEFLAT*LVRVGG Trigger: ACCCCCGACCCTGACCAATCAAGTGGCCAGGAATTC...GGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAGAATTCCTGGCCACTTaGTTGGTCAGGGTCGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRCVLGRPGLTPPYSLKGEFLAT*LVRVGG Trigger: ACCCCCGACCCTGACCAATCAAGTGGCCAGGAATTC...TCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | GCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTTCCCACCTCCGCTACATGCCTGTGACCTCCTTCTaGGTCAAAGACCTGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASPQLWVSLGQCSHLRYMPVTSF*VKDLES Trigger: GCTTTCCAGGTCTTTGACTCAGAAGGAGGTCACAGG...CATGTAGCGGAGGTGGGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | AATAGGAGCGCAGATGCTCTGCGGGCAGCTCCCGCTCCAACACCTGACGCAGGGTTGGGAATCTTGAGGTaGCGGTGTTTTGGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRSADALRAAPAPTPDAGLGILR*RCFGFS Trigger: AGAGAAGCCAAAACACCGTCACCTCAAGATTCCCAA...CCCTGCGTCAGGTGTTGGAGCGGGAGCTGCCCGCAGAGCATCTGCGCTCCTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTTCCCGGGCTGGGCGGCTCTaGGGTGTGAGCTGTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KALYKASPQLWVSLGQCSRAGRL*GVSCSF Trigger: GAAGCTACAGCTCACACCGCAGAGCCGCCCAGCCCG...GGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGAGTCCAGGCTTTCAGTaGCTGAGGCCTGGGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPQGKALYKASPQLWVSLSPGFQ*LRPGRC Trigger: GCACCTCCCAGGCCTCAGCCACTGAAAGCCTGGACT...CAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGTCTCCTAAGTTGTCCAGGCTGGCTTTGAGTTCCCTTTGTAGCCCGGATGCTTCCCTGGACCTCTaGGGACCGTGGGTCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GESPKLSRLALSSLCSPDASLDL*GPWVTV Trigger: CACAGTGACCCACGGTCCCCAGAGGTCCAGGGAAGC...ATCCGGGCTACAAAGGGAACTCAAAGCCAGCCTGGACAACTTAGGAGACTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCCGACCCGCAGGTCTATaGGCATTGCCAAGATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPRKAWSDSSLLPQGKALRPAGL*ALPRSA Trigger: AGCGGATCTTGGCAATGCCCATAGACCTGCGGGTCG...GAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTTCCTGGCCACTTGATTaGTCAGGGTCGGGGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGRPGLTPPYSLKGKLSSWPLD*SGSGVE Trigger: CTCTACCCCCGACCCTGACCAATCAAGTGGCCAGGA...AGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | AGGTCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTGCTGTGACAGGATCCTaGCCTTGGAGGCCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSQENTVGRCVLGRPGLTAVTGS*PWRPAA Trigger: TGCTGCTGGCCTCCAAGGCCAGGATCCTGTCACAGC...AGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCGCCGGTAGGAGGTGCTaGTGGGGAGCCCTTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGLTPPYSLKGKLSIKHRAGRRC*WGALGN Trigger: ATTCCCAAGGGCTCCCCACCAGCACCTCCTACCGGC...GCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | GTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTGAGGGGTCTCTCTGCTaGAACTGCAATCTGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGRPGLTPPYSLKGKLSEGSLC*NCNLTS Trigger: GCTGGTCAGATTGCAGTTTCAGCAGAGAGACCCCTC...AGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTAGAGGGGTCTCTCTGCTaGAACTGCAATCTGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GEHRGKMCPRKAWSDSSLEGSLC*NCNLTS Trigger: GCTGGTCAGATTGCAGTTTCAGCAGAGAGACCCCTC...TAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCGAGGGGTCTCTCTGCTaGAACTGCAATCTGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPRKAWSDSSLLPQGKALEGSLC*NCNLTS Trigger: GCTGGTCAGATTGCAGTTTCAGCAGAGAGACCCCTC...GAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | GTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTCGCTCCTGCTCAGCGTaGAGATCCTGCAGCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLGRPGLTPPYSLKGKLSRSCSA*RSCSIF Trigger: AAAGATGCTGCAGGATCTTCACGCTGAGCAGGAGCG...AGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | GGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCTCAGAGAAGCAGCACTaGCGCTGCTGGCTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLTPPYSLKGKLSIKHRPSEKQH*RCWLER Trigger: TCTCTCCAGCCAGCAGCGGCAGTGCTGCTTCTCTGA...GGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGGAGCCGTTCACCGCTTaGCCACAGTCCTCTGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: GRPGLTPPYSLKGKLSIKEPFTA*PQSSVP Trigger: GGGTACAGAGGACTGTGGGCAAGCGGTGAACGGCTC...CTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | GAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACGAAGTCTGCAGGTCCTaGGTGAGGTGGTGTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ENTVGRCVLGRPGLTPPYEVCRS*VRWCPQ Trigger: TTGTGGACACCACCTCACGCAGGACCTGCAGACTTC...GTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCCGAAACTCCTTTCGCTaGAAGGACGTCTCCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLTPPYSLKGKLSIKHRPRNSFR*KDVSRS Trigger: GCTGCGGGAGACGTCCTTCCAGCGAAAGGAGTTTCG...GGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCGCCGGTAGGAGGTGCTaGAAAGCTTGGTGTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPRKAWSDSSLLPQGKALAGRRC*KAWCEA Trigger: TGCTTCACACCAAGCTTTCCAGCACCTCCTACCGGC...GAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018531.12 |
||
| CDS-3UTR CCA 90 bp | CTGCAGCAGAGAGGCCTGGAACCACCGGGAGAGGGCGCAGTGAACACCGTTGCTGTCATTTGTAGTCTCTaGAATGCTTGTGGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQQRGLEPPGEGAVNTVAVICSL*NACGSG Trigger: TCCAGACCCACAAGCATTCCAGAGACTACAAATGAC...AGCAACGGTGTTCACTGCGCCCTCTCCCGGTGGTTCCAGGCCTCTCTGCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
||
| CDS-3UTR CCA 90 bp | GTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTGACCTTGATGCCTCTTaGGAAGTCTGCAGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGRPGLTPPYSLKGKLSDLDAS*EVCRSC Trigger: GCAGGACCTGCAGACTTCCCAAGAGGCATCAAGGTC...AGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | CTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATACGGGGTGTACAGGCCTaGCTCACAGCAGCCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGRPGLTPPYSLKGKLSIRGVQA*LTAASR Trigger: TCTAGAGGCTGCTGTGAGCCAGGCCTGTACACCCCG...TATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | CTCCAGATAGTGTCCAGTTGGTCCTTAAGGAACCGGATTCGATCGTCCAGGCTGCGGGGTGTACAGGCCTaGCTCACAGCAGCCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQIVSSWSLRNRIRSSRLRGVQA*LTAASR Trigger: TCTAGAGGCTGCTGTGAGCCAGGCCTGTACACCCCG...CAGCCTGGACGATCGAATCCGGTTCCTTAAGGACCAACTGGACACTATCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
||
| CDS-3UTR CCA 90 bp | GAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCACAGGATCCTGGCCTTaGAGGCCAGCAGCACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: EHRGKMCPRKAWSDSSLLTGSWP*RPAAHN Trigger: ATTGTGTGCTGCTGGCCTCCAAGGCCAGGATCCTGT...GAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCGCTGTGACAGGATCCTaGCCTTGGAGGCCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLTPPYSLKGKLSIKHRAVTGS*PWRPAA Trigger: TGCTGCTGGCCTCCAAGGCCAGGATCCTGTCACAGC...GCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGGGGCCCAGGTCAGTCTaGGAGAAAGGGGATGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRPGLTPPYSLKGKLSIKGPRSV*EKGDDG Trigger: GCCATCATCCCCTTTCTCCCAGACTGACCTGGGCCC...CTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
||
| 3UTR CAA 72 bp | CCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCAGTaGTGGGTGAGCCTGGGACAATGTTCCCACCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PQGKALYKASPQ*WVSLGQCSHLR Trigger: GCGGAGGTGGGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGGAATTCCTGGCCACTTaGTTGGTCAGGGTCGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRPGLTPPYSLKGKLSIKEFLAT*LVRVGG Trigger: ACCCCCGACCCTGACCAATCAAGTGGCCAGGAATTC...CTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | GGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCCGCTCCTGCTCAGCGTaGAGATCCTGCAGCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLTPPYSLKGKLSIKHRPRSCSA*RSCSIF Trigger: AAAGATGCTGCAGGATCTTCACGCTGAGCAGGAGCG...GGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | AGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAACTGGGAGAAAGGGGATaGTGGCTGAGGTCGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKAWSDSSLLPQGKALYKLGERG*WLRSLQ Trigger: CTGGAGCGACCTCAGCCATCATCCCCTTTCTCCCAG...TTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGTCAGAGAAGCAGCACTaGCGCTGCTGGCTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLLPQGKALYKASPQLWSEKQH*RCWLER Trigger: TCTCTCCAGCCAGCAGCGGCAGTGCTGCTTCTCTGA...CCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | GGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTATGGTCTGCGGATGTCTaGTCTTTGAGGAACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEHRGKMCPRKAWSDSSLWSADV*SLRNSL Trigger: CAGGCTGTTCCTCAAAGAGCAGACATCCGCAGACCA...TAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | AGGTCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTGAAGTCTGCAGGTCCTaGGTGAGGTGGTGTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RSQENTVGRCVLGRPGLTEVCRS*VRWCPQ Trigger: TTGTGGACACCACCTCACGCAGGACCTGCAGACTTC...AGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | CTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGAAGTCTGCAGGTCCTaGGTGAGGTGGTGTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LPQGKALYKASPQLWVSLEVCRS*VRWCPQ Trigger: TTGTGGACACCACCTCACGCAGGACCTGCAGACTTC...CAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAAGTCCAGGCTTTCAGTaGCTGAGGCCTGGGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKAWSDSSLLPQGKALYKSPGFQ*LRPGRC Trigger: GCACCTCCCAGGCCTCAGCCACTGAAAGCCTGGACT...TTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | CTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATACGAAACTCCTTTCGCTaGAAGGACGTCTCCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGRPGLTPPYSLKGKLSIRNSFR*KDVSRS Trigger: GCTGCGGGAGACGTCCTTCCAGCGAAAGGAGTTTCG...TATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCGACCCGCAGGTCTATaGGCATTGCCAAGATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLTPPYSLKGKLSIKHRRPAGL*ALPRSA Trigger: AGCGGATCTTGGCAATGCCCATAGACCTGCGGGTCG...GCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | TCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTGACCTTGATGCCTCTTaGGAAGTCTGCAGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQENTVGRCVLGRPGLTPDLDAS*EVCRSC Trigger: GCAGGACCTGCAGACTTCCCAAGAGGCATCAAGGTC...AGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCTCCTGCAGCATCTTTTaGAGGAGGCGGGCTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLTPPYSLKGKLSIKHRPSCSIF*RRRASS Trigger: GGAACTAGCCCGCCTCCTCCAAAAGATGCTGCAGGA...GGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCACGGGGTGTACAGGCCTaGCTCACAGCAGCCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAWSDSSLLPQGKALYKARGVQA*LTAASR Trigger: TCTAGAGGCTGCTGTGAGCCAGGCCTGTACACCCCG...TGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTTCCGGGCCCAGGTCAGTCTaGGAGAAAGGGGATGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KALYKASPQLWVSLGQCSGPRSV*EKGDDG Trigger: GCCATCATCCCCTTTCTCCCAGACTGACCTGGGCCC...GGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GAGGTCGCTCCAGATAGTGTCCAGTTGGTCCTTAAGGAACCGGATTCGATCGTCGGTAGGAGGTGCTGGTaGGGAGCCCTTGGGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EVAPDSVQLVLKEPDSIVGRRCW*GALGNL Trigger: AAGATTCCCAAGGGCTCCCCACCAGCACCTCCTACC...GACGATCGAATCCGGTTCCTTAAGGACCAACTGGACACTATCTGGAGCGACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
||
| CDS-3UTR TCA 90 bp | TCTGTGCATTACCTGTGTGCAAACCAGAGAGTGTCAGATTCCCTGGAACTGGAGCTGGGAGAAAGGGGATaGTGGCTGAGGTCGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVHYLCANQRVSDSLELELGERG*WLRSLQ Trigger: CTGGAGCGACCTCAGCCATCATCCCCTTTCTCCCAG...CTCCAGTTCCAGGGAATCTGACACTCTCTGGTTTGCACACAGGTAATGCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTTCCTCAGAGAAGCAGCACTaGCGCTGCTGGCTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KALYKASPQLWVSLGQCSSEKQH*RCWLER Trigger: TCTCTCCAGCCAGCAGCGGCAGTGCTGCTTCTCTGA...GGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | GAAATAAAACCCAGGTCCTCTGGCAGAACAGCACGTGATCTTAACTGCTGGTCCGAGCCGTTCACCGCTTaGCCACAGTCCTCTGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: EIKPRSSGRTARDLNCWSEPFTA*PQSSVP Trigger: GGGTACAGAGGACTGTGGGCAAGCGGTGAACGGCTC...GGACCAGCAGTTAAGATCACGTGCTGTTCTGCCAGAGGACCTGGGTTTTATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTTTCGAGGTAGGAGATTaGCTGCCCCAAACCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GKALYKASPQLWVSLGQCFEVGD*LPQTTR Trigger: GCGAGTGGTTTGGGGCAGCCAATCTCCTACCTCGAA...ACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | TTCCCATATAGCGGGGAGTACAGCTACACCACCAGGCCAGGCTTTGAATACTGCTTCGAGGTAGGAGATTaGCTGCCCCAAACCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FPYSGEYSYTTRPGFEYCFEVGD*LPQTTR Trigger: GCGAGTGGTTTGGGGCAGCCAATCTCCTACCTCGAA...GCAGTATTCAAAGCCTGGCCTGGTGGTGTAGCTGTACTCCCCGCTATATGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGTCTCCAGCAGCCCTTTaGACTTTGCGTGCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLPQGKALYKASPQLWSPAAL*TLRASH Trigger: GTGGGATGCACGCAAAGTCCAAAGGGCTGCTGGAGA...CCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | TGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCTCTCCAGCAGCCCTTTaGACTTTGCGTGCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WSDSSLLPQGKALYKASPSPAAL*TLRASH Trigger: GTGGGATGCACGCAAAGTCCAAAGGGCTGCTGGAGA...GGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGTCTCCAGCAGCCCTTTaGACTTTGCGTGCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRPGLTPPYSLKGKLSIKSPAAL*TLRASH Trigger: GTGGGATGCACGCAAAGTCCAAAGGGCTGCTGGAGA...CTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | TCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTGAATGCTTGTGGGTCTaGAGAGATCCACAGAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SQENTVGRCVLGRPGLTPECLWV*RDPQSR Trigger: ACGGCTCTGTGGATCTCTCCAGACCCACAAGCATTC...AGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCTCTCTGGAATGCTTGTaGGTCTGGAGAGATCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TGEHRGKMCPRKAWSDSSSLECL*VWRDPQ Trigger: CTGTGGATCTCTCCAGACCCACAAGCATTCCAGAGA...GGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTGACCTTGATGCCTCTTaGGAAGTCTGCAGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKALYKASPQLWVSLGQCDLDAS*EVCRSC Trigger: GCAGGACCTGCAGACTTCCCAAGAGGCATCAAGGTC...ACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATTCCTGGCCACTTGATTaGTCAGGGTCGGGGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPGLTPPYSLKGKLSIKHSWPLD*SGSGVE Trigger: CTCTACCCCCGACCCTGACCAATCAAGTGGCCAGGA...ATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGGATGTCTGCTCTTTaGGGAACAGCCTGGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPGLTPPYSLKGKLSIKHRMSAL*GTAWTV Trigger: CACTGTCCAGGCTGTTCCTCAAAGAGCAGACATCCG...ATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | ATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTTCCCACCTCCGCTACATGTAAGAGTTTTCAGACCTTaGTGCCTCTTGGGAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IAPVVGEPGTMFPPPLHVRVFRP*CLLGSL Trigger: CAGACTTCCCAAGAGGCATCAAGGTCTGAAAACTCT...TACATGTAGCGGAGGTGGGAACATTGTCCCAGGCTCACCCACAACTGGGGCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | AAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTTCCCGCTCCTGCTCAGCGTaGAGATCCTGCAGCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KALYKASPQLWVSLGQCSRSCSA*RSCSIF Trigger: AAAGATGCTGCAGGATCTTCACGCTGAGCAGGAGCG...GGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | TTCCCATATAGCGGGGAGTACAGCTACACCACCAGGCCAGGCTTTGAATACTGCCCTGTGACCTCCTTCTaGGTCAAAGACCTGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPYSGEYSYTTRPGFEYCPVTSF*VKDLES Trigger: GCTTTCCAGGTCTTTGACTCAGAAGGAGGTCACAGG...GCAGTATTCAAAGCCTGGCCTGGTGGTGTAGCTGTACTCCCCGCTATATGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATTCGAGGTAGGAGATTaGCTGCCCCAAACCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KAWSDSSLLPQGKALYKAFEVGD*LPQTTR Trigger: GCGAGTGGTTTGGGGCAGCCAATCTCCTACCTCGAA...TGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTGAACAGCCTGGACAGTaGCCACAGTCCTTTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GKALYKASPQLWVSLGQCEQPGQ*PQSFLN Trigger: GTTCAGAAAGGACTGTGGCCACTGTCCAGGCTGTTC...ACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | CTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAGAATGCTTGTGGGTCTaGAGAGATCCACAGAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGRPGLTPPYSLKGKLSIECLWV*RDPQSR Trigger: ACGGCTCTGTGGATCTCTCCAGACCCACAAGCATTC...TATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CCA 90 bp | GGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGGAATGCTTGTGGGTCTaGAGAGATCCACAGAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GRPGLTPPYSLKGKLSIKECLWV*RDPQSR Trigger: ACGGCTCTGTGGATCTCTCCAGACCCACAAGCATTC...CTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCTCTCTGGAATGCTTGTaGGTCTGGAGAGATCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GLTPPYSLKGKLSIKHRPSLECL*VWRDPQ Trigger: CTGTGGATCTCTCCAGACCCACAAGCATTCCAGAGA...GGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CCA 90 bp | AAAGCTCTCTATAAAGCATCGCCCCAGTTGTGGGTGAGCCTGGGACAATGTTCCACAGGATCCTGGCCTTaGAGGCCAGCAGCACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: KALYKASPQLWVSLGQCSTGSWP*RPAAHN Trigger: ATTGTGTGCTGCTGGCCTCCAAGGCCAGGATCCTGT...GGAACATTGTCCCAGGCTCACCCACAACTGGGGCGATGCTTTATAGAGAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTGCATTACCTGTGTGCAAACCAGAGAGTGTCAGATTCCCTGGAACTGGAGAGTCTGGCCAGCTCTTaGACCAGCGCCTCAAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SVHYLCANQRVSDSLELESLASS*TSASKC Trigger: GCATTTTGAGGCGCTGGTTCAAGAGCTGGCCAGACT...CTCCAGTTCCAGGGAATCTGACACTCTCTGGTTTGCACACAGGTAATGCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | AGGTCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTTTGGGAATCTTGAGGTaGCGGTGTTTTGGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSQENTVGRCVLGRPGLTLGILR*RCFGFS Trigger: AGAGAAGCCAAAACACCGTCACCTCAAGATTCCCAA...AGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATTGGTCTGCGGATGTCTaGTCTTTGAGGAACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPGLTPPYSLKGKLSIKHWSADV*SLRNSL Trigger: CAGGCTGTTCCTCAAAGAGCAGACATCCGCAGACCA...ATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | TGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCTCTCTGGAATGCTTGTaGGTCTGGAGAGATCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WSDSSLLPQGKALYKASPSLECL*VWRDPQ Trigger: CTGTGGATCTCTCCAGACCCACAAGCATTCCAGAGA...GGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCCTAGTTCCACTTTCTTaGCCTGGGTGCTGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLTPPYSLKGKLSIKHRPLVPLS*PGCCFL Trigger: AAGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAG...GGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CCA 90 bp | TCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCTAGTTCCACTTTCTTaGCCTGGGTGCTGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQENTVGRCVLGRPGLTPLVPLS*PGCCFL Trigger: AAGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAG...AGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CCA 90 bp | GGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTATCTGAGTCAAAGACCTaGAAAGCTTGGTGTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEHRGKMCPRKAWSDSSLSESKT*KAWCEA Trigger: TGCTTCACACCAAGCTTTCCAGGTCTTTGACTCAGA...TAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR TCA 90 bp | CCCACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGTCAGGCTTTCAGTGGCTaGGGCCTGGGAGGTGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTNSQRITNLNKVTGEHRQAFSG*GLGGAV Trigger: GACCGCACCTCCCAGGCCTCAGCCACTGAAAGCCTG...ACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR TCA 90 bp | GGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGAGAGTTTTCAGACCTTaGTGCCTCTTGGGAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRPGLTPPYSLKGKLSIKRVFRP*CLLGSL Trigger: CAGACTTCCCAAGAGGCATCAAGGTCTGAAAACTCT...CTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR TCA 90 bp | GAAATAAAACCCAGGTCCTCTGGCAGAACAGCACGTGATCTTAACTGCTGGTCCCAGGACACACTCCTGTaGCCTCCTTCTGAGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EIKPRSSGRTARDLNCWSQDTLL*PPSESK Trigger: CTTTGACTCAGAAGGAGGTCACAGGAGTGTGTCCTG...GGACCAGCAGTTAAGATCACGTGCTGTTCTGCCAGAGGACCTGGGTTTTATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
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| CDS-3UTR GCA 90 bp | CGACCCACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGGGCTGGGCGGCTCTaGGGTGTGAGCTGTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPTNSQRITNLNKVTGEHRAGRL*GVSCSF Trigger: GAAGCTACAGCTCACACCGCAGAGCCGCCCAGCCCG...GTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CCA 90 bp | TCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTTCTGAGTCAAAGACCTaGAAAGCTTGGTGTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQENTVGRCVLGRPGLTPSESKT*KAWCEA Trigger: TGCTTCACACCAAGCTTTCCAGGTCTTTGACTCAGA...AGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | ACAAACTTGAATAAGGTCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGGTAGGAGGTGCTGGTaGGGAGCCCTTGGGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TNLNKVTGEHRGKMCPRKGRRCW*GALGNL Trigger: AAGATTCCCAAGGGCTCCCCACCAGCACCTCCTACC...CTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | ACAAACTTGAATAAGGTCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGAGTCTGGCCAGCTCTTaGACCAGCGCCTCAAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TNLNKVTGEHRGKMCPRKSLASS*TSASKC Trigger: GCATTTTGAGGCGCTGGTTCAAGAGCTGGCCAGACT...CTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CCA 90 bp | CGACCCACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACTCAGTGGCTGAGGCCTaGGAGGTGCGGTCTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPTNSQRITNLNKVTGEHSVAEA*EVRSLP Trigger: TGGGAGAGACCGCACCTCCCAGGCCTCAGCCACTGA...GTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGGTCATTTGTAGTCTCTaGAATGCTTGTGGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRPGLTPPYSLKGKLSIKVICSL*NACGSG Trigger: TCCAGACCCACAAGCATTCCAGAGACTACAAATGAC...CTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCTAGTTCCACTTTCTTaGCCTGGGTGCTGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPGLTPPYSLKGKLSIKHLVPLS*PGCCFL Trigger: AAGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAG...ATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | ACAAACTTGAATAAGGTCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGTGGTCTGCGGATGTCTaGTCTTTGAGGAACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TNLNKVTGEHRGKMCPRKWSADV*SLRNSL Trigger: CAGGCTGTTCCTCAAAGAGCAGACATCCGCAGACCA...CTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | ACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGTGGGTCCTGGCCACTTGATTaGTCAGGGTCGGGGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TNSQRITNLNKVTGEHRGSWPLD*SGSGVE Trigger: CTCTACCCCCGACCCTGACCAATCAAGTGGCCAGGA...CCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | CCCACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGTCGGATGTCTGCTCTTTaGGGAACAGCCTGGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTNSQRITNLNKVTGEHRRMSAL*GTAWTV Trigger: CACTGTCCAGGCTGTTCCTCAAAGAGCAGACATCCG...ACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | ACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGTGGGAGTCTGGCCAGCTCTTaGACCAGCGCCTCAAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TNSQRITNLNKVTGEHRGSLASS*TSASKC Trigger: GCATTTTGAGGCGCTGGTTCAAGAGCTGGCCAGACT...CCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CCA 90 bp | CGACCCACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACTCCTGCAGCATCTTTTaGAGGAGGCGGGCTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPTNSQRITNLNKVTGEHSCSIF*RRRASS Trigger: GGAACTAGCCCGCCTCCTCCAAAAGATGCTGCAGGA...GTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| 3UTR CAA 72 bp | CTTTTTACGTCTTATTTTGAGGGAGAGTCTCCTAAGTaGTCCAGGCTGGCTTTGAGTTCCCTTTGTAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LFTSYFEGESPK*SRLALSSLCSP Trigger: CGGGCTACAAAGGGAACTCAAAGCCAGCCTGGACAACTTAGGAGACTCTCCCTCAAAATAAGACGTAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
||
| CDS-3UTR TCA 90 bp | CCCACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGTCAGGACACACTCCTGTaGCCTCCTTCTGAGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTNSQRITNLNKVTGEHRQDTLL*PPSESK Trigger: CTTTGACTCAGAAGGAGGTCACAGGAGTGTGTCCTG...ACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR GCA 90 bp | ACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGTGGGACTGCCGGTAGGAGGTaGTGGAAAGCTTGGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TNSQRITNLNKVTGEHRGTAGRR*WKAWCE Trigger: TTCACACCAAGCTTTCCAGCACCTCCTACCGGCAGT...CCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018531.12 |
||
| CDS-3UTR CCA 90 bp | CCCACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGTGAACAGCCTGGACAGTaGCCACAGTCCTTTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PTNSQRITNLNKVTGEHREQPGQ*PQSFLN Trigger: GTTCAGAAAGGACTGTGGCCACTGTCCAGGCTGTTC...ACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CCA 90 bp | CGACCCACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACGAACAGCCTGGACAGTaGCCACAGTCCTTTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPTNSQRITNLNKVTGEHEQPGQ*PQSFLN Trigger: GTTCAGAAAGGACTGTGGCCACTGTCCAGGCTGTTC...GTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGGTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CCA 90 bp | ACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGTGGGGTCATTTGTAGTCTCTaGAATGCTTGTGGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNSQRITNLNKVTGEHRGVICSL*NACGSG Trigger: TCCAGACCCACAAGCATTCCAGAGACTACAAATGAC...CCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| 3UTR CAA 72 bp | TTTTTACGACCCACAAATTCCCAAAGAATTACAAACTaGAATAAGGTCACAGGAGAACACCGTGGGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: FLRPTNSQRITN*NKVTGEHRGKM Trigger: CATCTTCCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGGTCGTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 90 bp | CCGCTGGCGGTAGGCGTCCCGCGAGGCTGGCGGGCTGGGCGGCTCTaGGGTGTGAGCTGTAGCTTCAGCCTCCGCGGCCAGCGCGTACAG | + |
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Preference number: 5 (lower is better) Translates to: PLAVGVPRGWRAGRL*GVSCSFSLRGQRVQ Trigger: CTGTACGCGCTGGCCGCGGAGGCTGAAGCTACAGCTCACACCGCAGAGCCGCCCAGCCCGCCAGCCTCGCGGGACGCCTACCGCCAGCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 90 bp | CTGGGACAGCGGTGCGCGCCGGCTCCTCTTCTCCCAGCTCCTGGCTaGTGGAGGCGGAGCGCACGTGCGCCGTGGGAAGTCGCGTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: LGQRCAPAPLLPAPG*WRRSARAPWEVAWG Trigger: TCCCCACGCGACTTCCCACGGCGCACGTGCGCTCCGCCTCCAGCAGCCAGGAGCTGGGAGAAGAGGAGCCGGCGCGCACCGCTGTCCCAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | AGCGCTGGGACAGCGGTGCGCGCCGGCTCCTCTTCTCCCAGCTCCTaGCTGCTGGAGGCGGAGCGCACGTGCGCCGTGGGAAGTCGCGTG | + |
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Preference number: 5 (lower is better) Translates to: SAGTAVRAGSSSPSS*LLEAERTCAVGSRV Trigger: CACGCGACTTCCCACGGCGCACGTGCGCTCCGCCTCCAGCAGCCAGGAGCTGGGAGAAGAGGAGCCGGCGCGCACCGCTGTCCCAGCGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 90 bp | GCTGGAGGCGGAGCGCACGTGCGCCGTGGGAAGTCGCGTGGGGACTaGGGGACGCAGGCGGCCCGGCAGGCTCATGCGAAACTCCTTTCG | + |
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Preference number: 5 (lower is better) Translates to: AGGGAHVRRGKSRGD*GTQAARQAHAKLLS Trigger: CGAAAGGAGTTTCGCATGAGCCTGCCGGGCCGCCTGCGTCCCGCAGTCCCCACGCGACTTCCCACGGCGCACGTGCGCTCCGCCTCCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | TCGCTGTGCACCCTGCAACCGCTGGCGGTAGGCGTCCCGCGAGGCTaGCGGGCTGGGCGGCTCTGCGGTGTGAGCTGTAGCTTCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SLCTLQPLAVGVPRG*RAGRLCGVSCSFSL Trigger: GAGGCTGAAGCTACAGCTCACACCGCAGAGCCGCCCAGCCCGCCAGCCTCGCGGGACGCCTACCGCCAGCGGTTGCAGGGTGCACAGCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 90 bp | CCCGGGGTGTACAGGCCTGGCTCACAGCAGCCTCTAGAGCTCCGTTaGGTTGGGTCCAGTCTGCGGCGGTCCCCCGCAGTCGCTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PGVYRPGSQQPLELR*VGSSLRRSPAVAPA Trigger: AGCAGGAGCGACTGCGGGGGACCGCCGCAGACTGGACCCAACGCAACGGAGCTCTAGAGGCTGCTGTGAGCCAGGCCTGTACACCCCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 90 bp | AAACTCCTTTCGCTGGAAGGACGTCTCCCGCAGCACTCGTCGCTGTaGACCCTGCAACCGCTGGCGGTAGGCGTCCCGCGAGGCTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: KLLSLEGRLPQHSSL*TLQPLAVGVPRGWR Trigger: CCGCCAGCCTCGCGGGACGCCTACCGCCAGCGGTTGCAGGGTGCACAGCGACGAGTGCTGCGGGAGACGTCCTTCCAGCGAAAGGAGTTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 90 bp | GAAGTCGCGTGGGGACTGCGGGACGCAGGCGGCCCGGCAGGCTCATaGGAAACTCCTTTCGCTGGAAGGACGTCTCCCGCAGCACTCGTC | + |
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Preference number: 5 (lower is better) Translates to: EVAWGLRDAGGPAGS*ETPFAGRTSPAALV Trigger: GACGAGTGCTGCGGGAGACGTCCTTCCAGCGAAAGGAGTTTCGCATGAGCCTGCCGGGCCGCCTGCGTCCCGCAGTCCCCACGCGACTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | GCGGGACGCAGGCGGCCCGGCAGGCTCATGCGAAACTCCTTTCGCTaGAAGGACGTCTCCCGCAGCACTCGTCGCTGTGCACCCTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: AGRRRPGRLMRNSFR*KDVSRSTRRCAPCN Trigger: GTTGCAGGGTGCACAGCGACGAGTGCTGCGGGAGACGTCCTTCCAGCGAAAGGAGTTTCGCATGAGCCTGCCGGGCCGCCTGCGTCCCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | GGTGTACAGGCCTGGCTCACAGCAGCCTCTAGAGCTCCGTTGCGTTaGGTCCAGTCTGCGGCGGTCCCCCGCAGTCGCTCCTGCTCAGCG | + |
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Preference number: 5 (lower is better) Translates to: GVQAWLTAASRAPLR*VQSAAVPRSRSCSA Trigger: CGCTGAGCAGGAGCGACTGCGGGGGACCGCCGCAGACTGGACCCAACGCAACGGAGCTCTAGAGGCTGCTGTGAGCCAGGCCTGTACACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS TCA 90 bp | GTCGGCGCGCGTGGACAACCGTCGCAAGTCCAGGCTTTCAGTGGCTaGGGCCTGGGAGGTGCGGTCTCTCCCAGTACCCAGGGCCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: VGARGQPSQVQAFSG*GLGGAVSPSTQGLH Trigger: ATGGAGGCCCTGGGTACTGGGAGAGACCGCACCTCCCAGGCCTCAGCCACTGAAAGCCTGGACTTGCGACGGTTGTCCACGCGCGCCGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | CGGTGCCAGGGGACGGAGTGCGCGTCTCAGGATCACCAGACGCCGTaGAGAAAGAGCTGTAGGCAGAGTCGGCGCGCGTGGACAACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RCQGTECASQDHQTP*RKSCRQSRRAWTTV Trigger: GACGGTTGTCCACGCGCGCCGACTCTGCCTACAGCTCTTTCTCCACGGCGTCTGGTGATCCTGAGACGCGCACTCCGTCCCCTGGCACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | GATGTAATTTGCCTGGCTCAGAGAAGCAGCACTGCCGCTGCTGGCTaGAGAGACGCCCCCGGCCAGCAGCAGCTAGCGCTGGGACAGCGG | + |
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Preference number: 5 (lower is better) Translates to: DVICLAQRSSTAAAG*RDAPGQQQLALGQR Trigger: CCGCTGTCCCAGCGCTAGCTGCTGCTGGCCGGGGGCGTCTCTCCAGCCAGCAGCGGCAGTGCTGCTTCTCTGAGCCAGGCAAATTACATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | GGAAAAAGCCCATCCAGCAGGCCCTGCGGTGGCTCTGGACCGGGCTaGGCGGCAAGAGTACGGCTCAAAGAGGGATCCAGTCTGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GKSPSSRPCGGSGPG*AARVRLKEGSSLAS Trigger: GCTGGCCAGACTGGATCCCTCTTTGAGCCGTACTCTTGCCGCCCAGCCCGGTCCAGAGCCACCGCAGGGCCTGCTGGATGGGCTTTTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 90 bp | AAACCACTCGCACGTAGTCCCAGTCTAGGTAAGGGAGGCGCTCGGTaGCAGGGGACGGAGTGCGCGTCTCAGGATCACCAGACGCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KPLARSPSLGKGGAR*QGTECASQDHQTPW Trigger: CCACGGCGTCTGGTGATCCTGAGACGCGCACTCCGTCCCCTGGCACCGAGCGCCTCCCTTACCTAGACTGGGACTACGTGCGAGTGGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | CACCAGACGCCGTGGAGAAAGAGCTGTAGGCAGAGTCGGCGCGCGTaGACAACCGTCGCAAGTCCAGGCTTTCAGTGGCTGAGGCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: HQTPWRKSCRQSRRA*TTVASPGFQWLRPG Trigger: CCCAGGCCTCAGCCACTGAAAGCCTGGACTTGCGACGGTTGTCCACGCGCGCCGACTCTGCCTACAGCTCTTTCTCCACGGCGTCTGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS TCA 90 bp | TGGGTCCAGTCTGCGGCGGTCCCCCGCAGTCGCTCCTGCTCAGCGTaGAGATCCTGCAGCATCTTTTGGAGGAGGCGGGCTAGTTCCACT | + |
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Preference number: 5 (lower is better) Translates to: WVQSAAVPRSRSCSA*RSCSIFWRRRASST Trigger: AGTGGAACTAGCCCGCCTCCTCCAAAAGATGCTGCAGGATCTTCACGCTGAGCAGGAGCGACTGCGGGGGACCGCCGCAGACTGGACCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 90 bp | AGTCCCAGTCTAGGTAAGGGAGGCGCTCGGTGCCAGGGGACGGAGTaGGCGTCTCAGGATCACCAGACGCCGTGGAGAAAGAGCTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: SPSLGKGGARCQGTE*ASQDHQTPWRKSCR Trigger: CCTACAGCTCTTTCTCCACGGCGTCTGGTGATCCTGAGACGCGCACTCCGTCCCCTGGCACCGAGCGCCTCCCTTACCTAGACTGGGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 90 bp | CTCCAACCTACGCGATGTAATTTGCCTGGCTCAGAGAAGCAGCACTaGCGCTGCTGGCTGGAGAGACGCCCCCGGCCAGCAGCAGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: LQPTRCNLPGSEKQH*RCWLERRPRPAAAS Trigger: GCTAGCTGCTGCTGGCCGGGGGCGTCTCTCCAGCCAGCAGCGGCAGTGCTGCTTCTCTGAGCCAGGCAAATTACATCGCGTAGGTTGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | TACAGCAGTGGGGTGTCTTGTCTGTTTAGTGGTCCCGGGCTTCCCTaGACCTCTGGGGACCGTGGGTCACTGTGCCCAGCGACTGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: YSSGVSCLFSGPGLP*TSGDRGSLCPATAC Trigger: GCAGGCAGTCGCTGGGCACAGTGACCCACGGTCCCCAGAGGTCCAGGGAAGCCCGGGACCACTAAACAGACAAGACACCCCACTGCTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | CTCTTCGACAGGAAAAAGCCCATCCAGCAGGCCCTGCGGTGGCTCTaGACCGGGCTGGGCGGCAAGAGTACGGCTCAAAGAGGGATCCAG | + |
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Preference number: 5 (lower is better) Translates to: LFDRKKPIQQALRWL*TGLGGKSTAQRGIQ Trigger: CTGGATCCCTCTTTGAGCCGTACTCTTGCCGCCCAGCCCGGTCCAGAGCCACCGCAGGGCCTGCTGGATGGGCTTTTTCCTGTCGAAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | GTCATGAACCGGCGGAACCGTTCCAGCTCCCGGGGTGTACAGGCCTaGCTCACAGCAGCCTCTAGAGCTCCGTTGCGTTGGGTCCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: VMNRRNRSSSRGVQA*LTAASRAPLRWVQS Trigger: AGACTGGACCCAACGCAACGGAGCTCTAGAGGCTGCTGTGAGCCAGGCCTGTACACCCCGGGAGCTGGAACGGTTCCGCCGGTTCATGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CAA 90 bp | CCGCTCCAACACCTGACGCAGGGTTTGCTCCCGCCGAGCCACGTGCTCCTTCAGCTTCGAGGTAGGAGATaGGCTGCCCCAAACCACTCG | + |
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Preference number: 5 (lower is better) Translates to: PLQHLTQGLLPPSHVLLQLRGRR*AAPNHS Trigger: CGAGTGGTTTGGGGCAGCCAATCTCCTACCTCGAAG...CTGAAGGAGCACGTGGCTCGGCGGGAGCAAACCCTGCGTCAGGTGTTGGAGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| CDS TCA 90 bp | GGGGACCGTGGGTCACTGTGCCCAGCGACTGCCTGCACAGGTCGCTaGGTCGTTGAAAGGACAGCGTCCTTCGAGGTAGGAGATTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GDRGSLCPATACTGR*VVERTASFEVGDWL Trigger: CAGCCAATCTCCTACCTCGAAGGACGCTGTCCTTTCAACGACTCAGCGACCTGTGCAGGCAGTCGCTGGGCACAGTGACCCACGGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS TCA 90 bp | TGCCTAGCAGCAGCAGCAGACCAAGCACACGCTCTAGATCAGTCATaGACCGGCGGAACCGTTCCAGCTCCCGGGGTGTACAGGCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: CLAAAADQAHALDQS*TGGTVPAPGVYRPG Trigger: GCCAGGCCTGTACACCCCGGGAGCTGGAACGGTTCCGCCGGTTCATGACTGATCTAGAGCGTGTGCTTGGTCTGCTGCTGCTGCTAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS TCA 90 bp | TTGGAGTCGCTGCAGCAGAGAGGCCCTCTCATCAGGGTCGCTGTTTaGGCCCGCCCTAGCCAAGGCGAGGTTTACACGGACCAGGCGACT | + |
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Preference number: 5 (lower is better) Translates to: LESLQQRGPLIRVAV*ARPSQGEVYTDQAT Trigger: AGTCGCCTGGTCCGTGTAAACCTCGCCTTGGCTAGGGCGGGCTCAAACAGCGACCCTGATGAGAGGGCCTCTCTGCTGCAGCGACTCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
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| CDS TCA 90 bp | TGGGTCACTGTGCCCAGCGACTGCCTGCACAGGTCGCTGAGTCGTTaGAAGGACAGCGTCCTTCGAGGTAGGAGATTGGCTGCCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WVTVPSDCLHRSLSR*KDSVLRGRRLAAPN Trigger: GTTTGGGGCAGCCAATCTCCTACCTCGAAGGACGCTGTCCTTTCAACGACTCAGCGACCTGTGCAGGCAGTCGCTGGGCACAGTGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 90 bp | AGCTCCTTAGCTTCTTCTTGCTGTCGCTGCAGAAGTTGGAGTCGCTaGAGCAGAGAGGCCCTCTCATCAGGGTCGCTGTTTGAGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLASSCCRCRSWSR*SREALSSGSLFEPA Trigger: GGCGGGCTCAAACAGCGACCCTGATGAGAGGGCCTCTCTGCTGCAGCGACTCCAACTTCTGCAGCGACAGCAAGAAGAAGCTAAGGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
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| CDS GCA 90 bp | GGGTCGGGGGTAGAGTTTTCAGACCTTGATGCCTCTTGGGAAGTCTaGAGGTCCTGCGTGAGGTGGTGTCCACAAGACCCTTCCTCCGAT | + |
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Preference number: 5 (lower is better) Translates to: GSGVEFSDLDASWEV*RSCVRWCPQDPSSD Trigger: ATCGGAGGAAGGGTCTTGTGGACACCACCTCACGCAGGACCTGCAGACTTCCCAAGAGGCATCAAGGTCTGAAAACTCTACCCCCGACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | GCAGCCCTTTGGACTTTGCGTGCATCCCACGCTGCAACTCCTGCGTaGAATAATCTTTTCTCAAGTCCTCACCAGTGGGCCCACCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AALWTLRASHAATPA*NNLFSSPHQWAHRS Trigger: GGAGCGGTGGGCCCACTGGTGAGGACTTGAGAAAAGATTATTCCACGCAGGAGTTGCAGCGTGGGATGCACGCAAAGTCCAAAGGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CAA 90 bp | GAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCTTCGAGGTAGGAGATaGGCTGCCCCAAACCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: EHRGKMCPRKAWSDSSLLLRGRR*AAPNHS Trigger: CGAGTGGTTTGGGGCAGCCAATCTCCTACCTCGAAG...GAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CAA 90 bp | TGCTTCCCGGATGATCCGGGCGGTAGAAGGAAGGCCCCTCCAAACCCTGCTCTTCTAGGCCAAGTAGTCTaGGAATCAAACTGGCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CFPDDPGGRRKAPPNPALLGQVV*ESNWPQ Trigger: TTGGGGCCAGTTTGATTCCAAGACTACTTGGCCTAG...AAGAGCAGGGTTTGGAGGGGCCTTCCTTCTACCGCCCGGATCATCCGGGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093114.5 |
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| CDS-3UTR CAA 90 bp | GAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACCAGTCTGGCCAGCTCTaGAACCAGCGCCTCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: ENTVGRCVLGRPGLTPPYQSGQL*NQRLKM Trigger: CATTTTGAGGCGCTGGTTCAAGAGCTGGCCAGACTG...GTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS TCA 90 bp | GCGGCAAGAGTACGGCTCAAAGAGGGATCCAGTCTGGCCAGCTCTTaGACCAGCGCCTCAAAATGCCGACTAGGCCAAGTAGTCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AARVRLKEGSSLASS*TSASKCRLGQVVLE Trigger: TTCCAAGACTACTTGGCCTAGTCGGCATTTTGAGGCGCTGGTTCAAGAGCTGGCCAGACTGGATCCCTCTTTGAGCCGTACTCTTGCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | TTCATACTGCCGGTAGGAGGTGCTGGAAAGCTTGGTGTGAAGCAGTaGTCTGCGGATGTCTGCTCTTTGAGGAACAGCCTGGACAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FILPVGGAGKLGVKQ*SADVCSLRNSLDSG Trigger: GCCACTGTCCAGGCTGTTCCTCAAAGAGCAGACATCCGCAGACCACTGCTTCACACCAAGCTTTCCAGCACCTCCTACCGGCAGTATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018531.12 |
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| CDS-3UTR CAA 90 bp | GGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCGCGGATGTCTGCTCTTaGAGGAACAGCCTGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLTPPYSLKGKLSIKHRPADVCS*RNSLDS Trigger: ACTGTCCAGGCTGTTCCTCAAAGAGCAGACATCCGC...GGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CAA 90 bp | GGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGCTAGGCCAAGTAGTCTaGGAATCAAACTGGCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GKMCPRKAWSDSSLLPQGLGQVV*ESNWPQ Trigger: TTGGGGCCAGTTTGATTCCAAGACTACTTGGCCTAG...CCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACACATCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CAA 90 bp | GGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCTATAAAGCATCGCCCCCAGTCTGGCCAGCTCTaGAACCAGCGCCTCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: GLTPPYSLKGKLSIKHRPQSGQL*NQRLKM Trigger: CATTTTGAGGCGCTGGTTCAAGAGCTGGCCAGACTG...GGGGCGATGCTTTATAGAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CAA 90 bp | TGTCCTAGGAAGGCCTGGTCTGACTCCTCCCTACTCCCTCAAGGGAAAGCTCTCGCTAGTTCCACTTTCTaGGCCTGGGTGCTGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CPRKAWSDSSLLPQGKALASSTF*AWVLFP Trigger: AGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAGC...GAGAGCTTTCCCTTGAGGGAGTAGGGAGGAGTCAGACCAGGCCTTCCTAGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS GCA 90 bp | GCATCTTTTGGAGGAGGCGGGCTAGTTCCACTTTCTTGGCCTGGGTaGTGTTTCCTTCTGGGAATTCCTGGCCACTTGATTGGTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASFGGGGLVPLSWPG*CFLLGIPGHLIGQG Trigger: ACCCTGACCAATCAAGTGGCCAGGAATTCCCAGAAGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAGCCCGCCTCCTCCAAAAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 90 bp | CCTTCTGAGTCAAAGACCTGGAAAGCTTGGTGTGAAGCAGTGGTCTaGGGATGTCTGCTCTTTGAGGAACAGCCTGGACAGTGGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PSESKTWKAWCEAVV*GCLLFEEQPGQWPQ Trigger: CTGTGGCCACTGTCCAGGCTGTTCCTCAAAGAGCAGACATCCGCAGACCACTGCTTCACACCAAGCTTTCCAGGTCTTTGACTCAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS CCA 90 bp | TTGGCCTGGGTGCTGTTTCCTTCTGGGAATTCCTGGCCACTTGATTaGTCAGGGTCGGGGGTAGAGTTTTCAGACCTTGATGCCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAWVLFPSGNSWPLD*SGSGVEFSDLDASW Trigger: CCAAGAGGCATCAAGGTCTGAAAACTCTACCCCCGACCCTGACCAATCAAGTGGCCAGGAATTCCCAGAAGGAAACAGCACCCAGGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 90 bp | GACCTCCTTCTGAGTCAAAGACCTGGAAAGCTTGGTGTGAAGCAGTaGTCTGCGGATGTCTGCTCTTTGAGGAACAGCCTGGACAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DLLLSQRPGKLGVKQ*SADVCSLRNSLDSG Trigger: GCCACTGTCCAGGCTGTTCCTCAAAGAGCAGACATCCGCAGACCACTGCTTCACACCAAGCTTTCCAGGTCTTTGACTCAGAAGGAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS CCA 90 bp | TGCAGCATCTTTTGGAGGAGGCGGGCTAGTTCCACTTTCTTGGCCTaGGTGCTGTTTCCTTCTGGGAATTCCTGGCCACTTGATTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSIFWRRRASSTFLA*VLFPSGNSWPLDWS Trigger: TGACCAATCAAGTGGCCAGGAATTCCCAGAAGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAGCCCGCCTCCTCCAAAAGATGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS-3UTR CAA 90 bp | GAAATAAAACCCAGGTCCTCTGGCAGAACAGCACGTGATCTTAACTGCTGGTCCCTTCGAGGTAGGAGATaGGCTGCCCCAAACCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: EIKPRSSGRTARDLNCWSLRGRR*AAPNHS Trigger: CGAGTGGTTTGGGGCAGCCAATCTCCTACCTCGAAG...GGACCAGCAGTTAAGATCACGTGCTGTTCTGCCAGAGGACCTGGGTTTTATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
||
| CDS-3UTR CAA 90 bp | AGGTCACAGGAGAACACCGTGGGAAGATGTGTCCTAGGAAGGCCTGGTCTGACTCTAGGCCAAGTAGTCTaGGAATCAAACTGGCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RSQENTVGRCVLGRPGLTLGQVV*ESNWPQ Trigger: TTGGGGCCAGTTTGATTCCAAGACTACTTGGCCTAG...AGTCAGACCAGGCCTTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CAA 90 bp | TTCCCATATAGCGGGGAGTACAGCTACACCACCAGGCCAGGCTTTGAATACTGCGCTAGTTCCACTTTCTaGGCCTGGGTGCTGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FPYSGEYSYTTRPGFEYCASSTF*AWVLFP Trigger: AGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAGC...GCAGTATTCAAAGCCTGGCCTGGTGGTGTAGCTGTACTCCCCGCTATATGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109013.9 |
||
| CDS CCA 90 bp | CTCTGTAGCTGCAGAGGGGTCAGTGGTCCCATTAGTGTCAAAGGTTaGGATGTCGTCATTTGTAGTCTCTGGAATGCTTGTGGGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCSCRGVSGPISVKG*DVVICSLWNACGSG Trigger: TCCAGACCCACAAGCATTCCAGAGACTACAAATGACGACATCCCAACCTTTGACACTAATGGGACCACTGACCCCTCTGCAGCTACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CAA 90 bp | CCCACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGTGCGGATGTCTGCTCTTaGAGGAACAGCCTGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: PTNSQRITNLNKVTGEHRADVCS*RNSLDS Trigger: ACTGTCCAGGCTGTTCCTCAAAGAGCAGACATCCGC...ACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS-3UTR CAA 90 bp | ACAAATTCCCAAAGAATTACAAACTTGAATAAGGTCACAGGAGAACACCGTGGGGCTAGTTCCACTTTCTaGGCCTGGGTGCTGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TNSQRITNLNKVTGEHRGASSTF*AWVLFP Trigger: AGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAGC...CCCACGGTGTTCTCCTGTGACCTTATTCAAGTTTGTAATTCTTTGGGAATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS CCA 72 bp | GCTCCTGGCTGCTGGAGGCGGAGCGCACGTGCGCCGTaGGAAGTCGCGTGGGGACTGCGGGACGCAGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: APGCWRRSARAP*EVAWGLRDAGG Trigger: GCCGCCTGCGTCCCGCAGTCCCCACGCGACTTCCCACGGCGCACGTGCGCTCCGCCTCCAGCAGCCAGGAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 72 bp | GGAGCGCACGTGCGCCGTGGGAAGTCGCGTGGGGACTaGGGGACGCAGGCGGCCCGGCAGGCTCATGCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GAHVRRGKSRGD*GTQAARQAHAK Trigger: TTTCGCATGAGCCTGCCGGGCCGCCTGCGTCCCGCAGTCCCCACGCGACTTCCCACGGCGCACGTGCGCTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS GCA 72 bp | TCTCCCAGCTCCTGGCTGCTGGAGGCGGAGCGCACGTaGGCCGTGGGAAGTCGCGTGGGGACTGCGGGACGC | + |
|
Preference number: 6 (lower is better) Translates to: SPSSWLLEAERT*AVGSRVGTAGR Trigger: GCGTCCCGCAGTCCCCACGCGACTTCCCACGGCGCACGTGCGCTCCGCCTCCAGCAGCCAGGAGCTGGGAGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 72 bp | CGGTGCGCGCCGGCTCCTCTTCTCCCAGCTCCTGGCTaGTGGAGGCGGAGCGCACGTGCGCCGTGGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RCAPAPLLPAPG*WRRSARAPWEV Trigger: GACTTCCCACGGCGCACGTGCGCTCCGCCTCCAGCAGCCAGGAGCTGGGAGAAGAGGAGCCGGCGCGCACCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CAA 90 bp | TCCCGGGGTGTACAGGCCTGGCTCACAGCAGCCTCTAGAGCTCCGTaGCGTTGGGTCCAGTCTGCGGCGGTCCCCCGCAGTCGCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRGVQAWLTAASRAP*RWVQSAAVPRSRSC Trigger: GCAGGAGCGACTGCGGGGGACCGCCGCAGACTGGACCCAACGCAACGGAGCTCTAGAGGCTGCTGTGAGCCAGGCCTGTACACCCCGGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 72 bp | TCGCTGGAAGGACGTCTCCCGCAGCACTCGTCGCTGTaGACCCTGCAACCGCTGGCGGTAGGCGTCCCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SLEGRLPQHSSL*TLQPLAVGVPR Trigger: TCGCGGGACGCCTACCGCCAGCGGTTGCAGGGTGCACAGCGACGAGTGCTGCGGGAGACGTCCTTCCAGCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS CCA 72 bp | TGCCTGGCTCAGAGAAGCAGCACTGCCGCTGCTGGCTaGAGAGACGCCCCCGGCCAGCAGCAGCTAGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CLAQRSSTAAAG*RDAPGQQQLAL Trigger: CAGCGCTAGCTGCTGCTGGCCGGGGGCGTCTCTCCAGCCAGCAGCGGCAGTGCTGCTTCTCTGAGCCAGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 72 bp | TGGGGACTGCGGGACGCAGGCGGCCCGGCAGGCTCATaGGAAACTCCTTTCGCTGGAAGGACGTCTCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: WGLRDAGGPAGS*ETPFAGRTSPA Trigger: TGCGGGAGACGTCCTTCCAGCGAAAGGAGTTTCGCATGAGCCTGCCGGGCCGCCTGCGTCCCGCAGTCCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 72 bp | TACAGGCCTGGCTCACAGCAGCCTCTAGAGCTCCGTTaGGTTGGGTCCAGTCTGCGGCGGTCCCCCGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: YRPGSQQPLELR*VGSSLRRSPAV Trigger: GACTGCGGGGGACCGCCGCAGACTGGACCCAACGCAACGGAGCTCTAGAGGCTGCTGTGAGCCAGGCCTGTA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | GGGACGGAGTGCGCGTCTCAGGATCACCAGACGCCGTaGAGAAAGAGCTGTAGGCAGAGTCGGCGCGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTECASQDHQTP*RKSCRQSRRAW Trigger: CCACGCGCGCCGACTCTGCCTACAGCTCTTTCTCCACGGCGTCTGGTGATCCTGAGACGCGCACTCCGTCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | CCATCCAGCAGGCCCTGCGGTGGCTCTGGACCGGGCTaGGCGGCAAGAGTACGGCTCAAAGAGGGATCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSSRPCGGSGPG*AARVRLKEGSS Trigger: ACTGGATCCCTCTTTGAGCCGTACTCTTGCCGCCCAGCCCGGTCCAGAGCCACCGCAGGGCCTGCTGGATGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | CGGCGGAACCGTTCCAGCTCCCGGGGTGTACAGGCCTaGCTCACAGCAGCCTCTAGAGCTCCGTTGCGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRNRSSSRGVQA*LTAASRAPLRW Trigger: CCAACGCAACGGAGCTCTAGAGGCTGCTGTGAGCCAGGCCTGTACACCCCGGGAGCTGGAACGGTTCCGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CAA 72 bp | GTACAGGCCTGGCTCACAGCAGCCTCTAGAGCTCCGTaGCGTTGGGTCCAGTCTGCGGCGGTCCCCCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VQAWLTAASRAP*RWVQSAAVPRS Trigger: ACTGCGGGGGACCGCCGCAGACTGGACCCAACGCAACGGAGCTCTAGAGGCTGCTGTGAGCCAGGCCTGTAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS TCA 72 bp | TCTGCGGCGGTCCCCCGCAGTCGCTCCTGCTCAGCGTaGAGATCCTGCAGCATCTTTTGGAGGAGGCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SAAVPRSRSCSA*RSCSIFWRRRA Trigger: AGCCCGCCTCCTCCAAAAGATGCTGCAGGATCTTCACGCTGAGCAGGAGCGACTGCGGGGGACCGCCGCAGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | AACCGTCGCAAGTCCAGGCTTTCAGTGGCTGAGGCCTaGGAGGTGCGGTCTCTCCCAGTACCCAGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NRRKSRLSVAEA*EVRSLPVPRAS Trigger: GGAGGCCCTGGGTACTGGGAGAGACCGCACCTCCCAGGCCTCAGCCACTGAAAGCCTGGACTTGCGACGGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | CGCGCGTGGACAACCGTCGCAAGTCCAGGCTTTCAGTaGCTGAGGCCTGGGAGGTGCGGTCTCTCCCAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: RAWTTVASPGFQ*LRPGRCGLSQY Trigger: GTACTGGGAGAGACCGCACCTCCCAGGCCTCAGCCACTGAAAGCCTGGACTTGCGACGGTTGTCCACGCGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | AGGCGGCCCGGCAGGCTCATGCGAAACTCCTTTCGCTaGAAGGACGTCTCCCGCAGCACTCGTCGCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRPGRLMRNSFR*KDVSRSTRRCA Trigger: TGCACAGCGACGAGTGCTGCGGGAGACGTCCTTCCAGCGAAAGGAGTTTCGCATGAGCCTGCCGGGCCGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS TCA 72 bp | CGTGGACAACCGTCGCAAGTCCAGGCTTTCAGTGGCTaGGGCCTGGGAGGTGCGGTCTCTCCCAGTACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGQPSQVQAFSG*GLGGAVSPSTQ Trigger: CTGGGTACTGGGAGAGACCGCACCTCCCAGGCCTCAGCCACTGAAAGCCTGGACTTGCGACGGTTGTCCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 72 bp | TGTAATTTGCCTGGCTCAGAGAAGCAGCACTGCCGCTaGTGGCTGGAGAGACGCCCCCGGCCAGCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CNLPGSEKQHCR*WLERRPRPAAA Trigger: AGCTGCTGCTGGCCGGGGGCGTCTCTCCAGCCAGCAGCGGCAGTGCTGCTTCTCTGAGCCAGGCAAATTACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS TCA 72 bp | CTGCAGCAGAGAGGCCCTCTCATCAGGGTCGCTGTTTaGGCCCGCCCTAGCCAAGGCGAGGTTTACACGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LQQRGPLIRVAV*ARPSQGEVYTD Trigger: GTCCGTGTAAACCTCGCCTTGGCTAGGGCGGGCTCAAACAGCGACCCTGATGAGAGGGCCTCTCTGCTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | CCGTGGAGAAAGAGCTGTAGGCAGAGTCGGCGCGCGTaGACAACCGTCGCAAGTCCAGGCTTTCAGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PWRKSCRQSRRA*TTVASPGFQWL Trigger: CAGCCACTGAAAGCCTGGACTTGCGACGGTTGTCCACGCGCGCCGACTCTGCCTACAGCTCTTTCTCCACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS TCA 72 bp | GGGTCACTGTGCCCAGCGACTGCCTGCACAGGTCGCTaGGTCGTTGAAAGGACAGCGTCCTTCGAGGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSLCPATACTGR*VVERTASFEVG Trigger: TCCTACCTCGAAGGACGCTGTCCTTTCAACGACTCAGCGACCTGTGCAGGCAGTCGCTGGGCACAGTGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS TCA 72 bp | TGGCCACAGTCCTTTCTGAACCCTTGCAGGGACCCATaGCCTCGCCTGAAACACTCTGACTCCGACCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WPQSFLNPCRDP*PRLKHSDSDPQ Trigger: CTGCGGGTCGGAGTCAGAGTGTTTCAGGCGAGGTCATGGGTCCCTGCAAGGGTTCAGAAAGGACTGTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS TCA 72 bp | ACCTTGATGCCTCTTGGGAAGTCTGCAGGTCCTGCGTaGGGTGGTGTCCACAAGACCCTTCCTCCGATGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TLMPLGKSAGPA*GGVHKTLPPMR Trigger: GCGCATCGGAGGAAGGGTCTTGTGGACACCACCTCACGCAGGACCTGCAGACTTCCCAAGAGGCATCAAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | TGCGCCAGCAGCCTTCTCTCCCATCTCCTCAAGGGCTaGCCTCATCGCACTTCGGATCTCTTCGACAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: CASSLLSHLLKG*PHRTSDLFDRK Trigger: TTTCCTGTCGAAGAGATCCGAAGTGCGATGAGGCCAGCCCTTGAGGAGATGGGAGAGAAGGCTGCTGGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | GGGTCGGGGGTAGAGTTTTCAGACCTTGATGCCTCTTaGGAAGTCTGCAGGTCCTGCGTGAGGTGGTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GSGVEFSDLDAS*EVCRSCVRWCP Trigger: TGGACACCACCTCACGCAGGACCTGCAGACTTCCCAAGAGGCATCAAGGTCTGAAAACTCTACCCCCGACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CAA 72 bp | CATTGCCAAGATCCGCTGGCCCGGAATTCAGCTCCGTaGAGCTTAGGGACTGAGTCTCCAGCAGCCCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HCQDPLARNSAP*SLGTESPAALW Trigger: CCAAAGGGCTGCTGGAGACTCAGTCCCTAAGCTCAACGGAGCTGAATTCCGGGCCAGCGGATCTTGGCAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CAA 90 bp | GGCGGCAAGAGTACGGCTCAAAGAGGGATCCAGTCTGGCCAGCTCTaGAACCAGCGCCTCAAAATGCCGACTAGGCCAAGTAGTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGKSTAQRGIQSGQL*NQRLKMPTRPSSLG Trigger: TCCAAGACTACTTGGCCTAGTCGGCATTTTGAGGCGCTGGTTCAAGAGCTGGCCAGACTGGATCCCTCTTTGAGCCGTACTCTTGCCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CAA 90 bp | GTGCTCCTTCAGCTCCTTAGCTTCTTCTTGCTGTCGCTGCAGAAGTaGGAGTCGCTGCAGCAGAGAGGCCCTCTCATCAGGGTCGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VLLQLLSFFLLSLQK*ESLQQRGPLIRVAV Trigger: AACAGCGACCCTGATGAGAGGGCCTCTCTGCTGCAGCGACTCCAACTTCTGCAGCGACAGCAAGAAGAAGCTAAGGAGCTGAAGGAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
||
| CDS TCA 72 bp | GGAGGTGCTGGTGGGGAGCCCTTGGGAATCTTGAGGTaGCGGTGTTTTGGCTTCTCTCAGGAACACGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: GGAGGEPLGILR*RCFGFSQEHVI Trigger: GATGACGTGTTCCTGAGAGAAGCCAAAACACCGTCACCTCAAGATTCCCAAGGGCTCCCCACCAGCACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS GCA 72 bp | TCAGACCTTGATGCCTCTTGGGAAGTCTGCAGGTCCTaGGTGAGGTGGTGTCCACAAGACCCTTCCTCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: SDLDASWEVCRS*VRWCPQDPSSD Trigger: ATCGGAGGAAGGGTCTTGTGGACACCACCTCACGCAGGACCTGCAGACTTCCCAAGAGGCATCAAGGTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS GCA 72 bp | GCTTCTTCTTGCTGTCGCTGCAGAAGTTGGAGTCGCTaGAGCAGAGAGGCCCTCTCATCAGGGTCGCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASSCCRCRSWSR*SREALSSGSLF Trigger: AAACAGCGACCCTGATGAGAGGGCCTCTCTGCTGCAGCGACTCCAACTTCTGCAGCGACAGCAAGAAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
||
| CDS GCA 72 bp | TGCTCCTTCAGCTCCTTAGCTTCTTCTTGCTGTCGCTaGAGAAGTTGGAGTCGCTGCAGCAGAGAGGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CSFSSLASSCCR*RSWSRCSREAL Trigger: GAGGGCCTCTCTGCTGCAGCGACTCCAACTTCTGCAGCGACAGCAAGAAGAAGCTAAGGAGCTGAAGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018531.12 ENSMUST00000109013.9 |
||
| CDS CCA 72 bp | TGCGGATGTCTGCTCTTTGAGGAACAGCCTGGACAGTaGCCACAGTCCTTTCTGAACCCTTGCAGGGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: CGCLLFEEQPGQ*PQSFLNPCRDP Trigger: TGGGTCCCTGCAAGGGTTCAGAAAGGACTGTGGCCACTGTCCAGGCTGTTCCTCAAAGAGCAGACATCCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
||
| CDS CCA 72 bp | CCGGTAGGAGGTGCTGGAAAGCTTGGTGTGAAGCAGTaGTCTGCGGATGTCTGCTCTTTGAGGAACAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PVGGAGKLGVKQ*SADVCSLRNSL Trigger: CAGGCTGTTCCTCAAAGAGCAGACATCCGCAGACCACTGCTTCACACCAAGCTTTCCAGCACCTCCTACCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018531.12 |
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| CDS TCA 72 bp | GTACGGCTCAAAGAGGGATCCAGTCTGGCCAGCTCTTaGACCAGCGCCTCAAAATGCCGACTAGGCCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: VRLKEGSSLASS*TSASKCRLGQV Trigger: TACTTGGCCTAGTCGGCATTTTGAGGCGCTGGTTCAAGAGCTGGCCAGACTGGATCCCTCTTTGAGCCGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 72 bp | GGAAAGCTTGGTGTGAAGCAGTGGTCTGCGGATGTCTaGTCTTTGAGGAACAGCCTGGACAGTGGCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: GKLGVKQWSADV*SLRNSLDSGHS Trigger: ACTGTGGCCACTGTCCAGGCTGTTCCTCAAAGAGCAGACATCCGCAGACCACTGCTTCACACCAAGCTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 72 bp | GGAGGAGGCGGGCTAGTTCCACTTTCTTGGCCTGGGTaGTGTTTCCTTCTGGGAATTCCTGGCCACTTGATT | + |
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Preference number: 6 (lower is better) Translates to: GGGGLVPLSWPG*CFLLGIPGHLI Trigger: AATCAAGTGGCCAGGAATTCCCAGAAGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAGCCCGCCTCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | GCATCTTTTGGAGGAGGCGGGCTAGTTCCACTTTCTTaGCCTGGGTGCTGTTTCCTTCTGGGAATTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: ASFGGGGLVPLS*PGCCFLLGIPG Trigger: GCCAGGAATTCCCAGAAGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAGCCCGCCTCCTCCAAAAGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | TGCTTAAGTCGTTTTCATACTGCCGGTAGGAGGTGCTaGTGGGGAGCCCTTGGGAATCTTGAGGTGACGGTG | + |
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Preference number: 6 (lower is better) Translates to: CLSRFHTAGRRC*WGALGNLEVTV Trigger: CACCGTCACCTCAAGATTCCCAAGGGCTCCCCACCAGCACCTCCTACCGGCAGTATGAAAACGACTTAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CAA 72 bp | AGTACGGCTCAAAGAGGGATCCAGTCTGGCCAGCTCTaGAACCAGCGCCTCAAAATGCCGACTAGGCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: STAQRGIQSGQL*NQRLKMPTRPS Trigger: ACTTGGCCTAGTCGGCATTTTGAGGCGCTGGTTCAAGAGCTGGCCAGACTGGATCCCTCTTTGAGCCGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS TCA 72 bp | CTGGGTGCTGTTTCCTTCTGGGAATTCCTGGCCACTTaGTTGGTCAGGGTCGGGGGTAGAGTTTTCAGACCT | + |
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Preference number: 6 (lower is better) Translates to: LGAVSFWEFLAT*LVRVGGRVFRP Trigger: AGGTCTGAAAACTCTACCCCCGACCCTGACCAATCAAGTGGCCAGGAATTCCCAGAAGGAAACAGCACCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 72 bp | GTAGAGTTTTCAGACCTTGATGCCTCTTGGGAAGTCTaGAGGTCCTGCGTGAGGTGGTGTCCACAAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: VEFSDLDASWEV*RSCVRWCPQDP Trigger: AGGGTCTTGTGGACACCACCTCACGCAGGACCTGCAGACTTCCCAAGAGGCATCAAGGTCTGAAAACTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | TGGACTTTGCGTGCATCCCACGCTGCAACTCCTGCGTaGAATAATCTTTTCTCAAGTCCTCACCAGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WTLRASHAATPA*NNLFSSPHQWA Trigger: GGCCCACTGGTGAGGACTTGAGAAAAGATTATTCCACGCAGGAGTTGCAGCGTGGGATGCACGCAAAGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | TTCTTGGCCTGGGTGCTGTTTCCTTCTGGGAATTCCTaGCCACTTGATTGGTCAGGGTCGGGGGTAGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: FLAWVLFPSGNS*PLDWSGSGVEF Trigger: AAACTCTACCCCCGACCCTGACCAATCAAGTGGCCAGGAATTCCCAGAAGGAAACAGCACCCAGGCCAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | TTTTGGAGGAGGCGGGCTAGTTCCACTTTCTTGGCCTaGGTGCTGTTTCCTTCTGGGAATTCCTGGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: FWRRRASSTFLA*VLFPSGNSWPL Trigger: AAGTGGCCAGGAATTCCCAGAAGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAGCCCGCCTCCTCCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CAA 72 bp | AGCATCTTTTGGAGGAGGCGGGCTAGTTCCACTTTCTaGGCCTGGGTGCTGTTTCCTTCTGGGAATTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SIFWRRRASSTF*AWVLFPSGNSW Trigger: CCAGGAATTCCCAGAAGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAGCCCGCCTCCTCCAAAAGATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CAA 90 bp | AGATCCTGCAGCATCTTTTGGAGGAGGCGGGCTAGTTCCACTTTCTaGGCCTGGGTGCTGTTTCCTTCTGGGAATTCCTGGCCACTTGAT | + |
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Preference number: 6 (lower is better) Translates to: RSCSIFWRRRASSTF*AWVLFPSGNSWPLD Trigger: ATCAAGTGGCCAGGAATTCCCAGAAGGAAACAGCACCCAGGCCAAGAAAGTGGAACTAGCCCGCCTCCTCCAAAAGATGCTGCAGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS GCA 72 bp | TCAAAGACCTGGAAAGCTTGGTGTGAAGCAGTGGTCTaGGGATGTCTGCTCTTTGAGGAACAGCCTGGACAG | + |
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Preference number: 6 (lower is better) Translates to: SKTWKAWCEAVV*GCLLFEEQPGQ Trigger: CTGTCCAGGCTGTTCCTCAAAGAGCAGACATCCGCAGACCACTGCTTCACACCAAGCTTTCCAGGTCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | CCTGCGTGGAATAATCTTTTCTCAAGTCCTCACCAGTaGGCCCACCGCTCCAACCTACGCGATGTAATTTGC | + |
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Preference number: 6 (lower is better) Translates to: PAWNNLFSSPHQ*AHRSNLRDVIC Trigger: GCAAATTACATCGCGTAGGTTGGAGCGGTGGGCCCACTGGTGAGGACTTGAGAAAAGATTATTCCACGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | CTGAGTCAAAGACCTGGAAAGCTTGGTGTGAAGCAGTaGTCTGCGGATGTCTGCTCTTTGAGGAACAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LSQRPGKLGVKQ*SADVCSLRNSL Trigger: CAGGCTGTTCCTCAAAGAGCAGACATCCGCAGACCACTGCTTCACACCAAGCTTTCCAGGTCTTTGACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | TTAAGTCGTTTTCATACTGCCGGTAGGAGGTGCTGGTaGGGAGCCCTTGGGAATCTTGAGGTGACGGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LSRFHTAGRRCW*GALGNLEVTVF Trigger: AAACACCGTCACCTCAAGATTCCCAAGGGCTCCCCACCAGCACCTCCTACCGGCAGTATGAAAACGACTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093114.5 ENSMUST00000109013.9 |
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| CDS CCA 72 bp | TGCAGAGGGGTCAGTGGTCCCATTAGTGTCAAAGGTTaGGATGTCGTCATTTGTAGTCTCTGGAATGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: CRGVSGPISVKG*DVVICSLWNAC Trigger: ACAAGCATTCCAGAGACTACAAATGACGACATCCCAACCTTTGACACTAATGGGACCACTGACCCCTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018531.12 ENSMUST00000093114.5 ENSMUST00000109013.9 |
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