Pregenerated sensors for SHQ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035378Ensembl transcript IDs: ENSMUST00000089245.7, ENSMUST00000113312.9, ENSMUST00000170667.8
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGAGCTCGGGAGACAGGCCAAGGGCATTCCCTCCAGGGCTTTCTaGCCAAGGCAGCTGCTGGCTCCTTCGGGGAATAGCTACAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: EELGRQAKGIPSRAF*PRQLLAPSGNSYRA Trigger: TGCTCTGTAGCTATTCCCCGAAGGAGCCAGCAGCTGCCTTGGTCAGAAAGCCCTGGAGGGAATGCCCTTGGCCTGTCTCCCGAGCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR GCA 90 bp | GCACAAAAGCACCCATTTGAGGGGTGTTCTGGGCTGCAGGTGTGGTaGAGTGGTGTTCTTAGCCATCCTGGACAAAGGCCAGGACGGTGT | + |
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Preference number: 1 (lower is better) Translates to: AQKHPFEGCSGLQVW*SGVLSHPGQRPGRC Trigger: ACACCGTCCTGGCCTTTGTCCAGGATGGCTAAGAACACCACTGCACCACACCTGCAGCCCAGAACACCCCTCAAATGGGTGCTTTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR CCA 90 bp | TTCCCAGTTCGTGCCAGTATTTGGATGTCTGGGGAGCTCCTGCAGTaGGTCTGGCTAGAGGAAGCGGGTCCCTGGGAACAGGTCTTTGAT | + |
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Preference number: 1 (lower is better) Translates to: FPVRASIWMSGELLQ*VWLEEAGPWEQVFD Trigger: ATCAAAGACCTGTTCCCAGGGACCCGCTTCCTCTAGCCAGACCCACTGCAGGAGCTCCCCAGACATCCAAATACTGGCACGAACTGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR CCA 90 bp | CCGCAGCCTCAGGTAATGTGCTGCCGAGGAGAACTGCATCTGCAATaGTCACAGAAATTCGGAAGCTCTCCAGGGAACCCCGAGAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: PQPQVMCCRGELHLQ*SQKFGSSPGNPEKG Trigger: GCCTTTCTCGGGGTTCCCTGGAGAGCTTCCGAATTTCTGTGACCATTGCAGATGCAGTTCTCCTCGGCAGCACATTACCTGAGGCTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR CCA 90 bp | TTGGCACAAAAGCACCCATTTGAGGGGTGTTCTGGGCTGCAGGTGTaGTGCAGTGGTGTTCTTAGCCATCCTGGACAAAGGCCAGGACGG | + |
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Preference number: 1 (lower is better) Translates to: LAQKHPFEGCSGLQV*CSGVLSHPGQRPGR Trigger: CCGTCCTGGCCTTTGTCCAGGATGGCTAAGAACACCACTGCACCACACCTGCAGCCCAGAACACCCCTCAAATGGGTGCTTTTGTGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR GCA 90 bp | CAAGTTGTTTGGCACAAAAGCACCCATTTGAGGGGTGTTCTGGGCTaGAGGTGTGGTGCAGTGGTGTTCTTAGCCATCCTGGACAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: QVVWHKSTHLRGVLG*RCGAVVFLAILDKG Trigger: GCCTTTGTCCAGGATGGCTAAGAACACCACTGCACCACACCTGCAGCCCAGAACACCCCTCAAATGGGTGCTTTTGTGCCAAACAACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR CCA 90 bp | TGCCAGGTATTTGGTCACAGCTACGCAAAAAGTAAGGGGGTAGGGTaGGAAGGCAGGCAGACACACATGCACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: CQVFGHSYAKSKGVG*EGRQTHMHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGCATGTGTGTCTGCCTGCCTTCCCACCCTACCCCCTTACTTTTTGCGTAGCTGTGACCAAATACCTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR CCA 90 bp | TTTATGTACAGTGCAAGCAATGTAAGATCAGGGAACATGGGTGGGTaGCATCTGGCCCAGAGAAAGGGATGTCAAAGGGTCCAGGGACAG | + |
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Preference number: 1 (lower is better) Translates to: FMYSASNVRSGNMGG*HLAQRKGCQRVQGQ Trigger: CTGTCCCTGGACCCTTTGACATCCCTTTCTCTGGGCCAGATGCCACCCACCCATGTTCCCTGATCTTACATTGCTTGCACTGTACATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR TCA 90 bp | GCAGGAAACCATGGCGATTTGAATGAGGTTTCCAGGCGGATGTTTTaGACATTTCCTTCCCAGTTCGTGCCAGTATTTGGATGTCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: AGNHGDLNEVSRRMF*TFPSQFVPVFGCLG Trigger: CCCCAGACATCCAAATACTGGCACGAACTGGGAAGGAAATGTTCAAAACATCCGCCTGGAAACCTCATTCAAATCGCCATGGTTTCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR TCA 90 bp | TCAGTGGCTGAAGGGACAAAGCTATTCCAAGAAATGTCTCCGCTCTaGGAAGACAACACAAAAGACTCGGCACATACTAGCAGCCTCATC | + |
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Preference number: 1 (lower is better) Translates to: SVAEGTKLFQEMSPL*EDNTKDSAHTSSLI Trigger: GATGAGGCTGCTAGTATGTGCCGAGTCTTTTGTGTTGTCTTCTCAGAGCGGAGACATTTCTTGGAATAGCTTTGTCCCTTCAGCCACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR TCA 90 bp | GTACAGACAAGTTCTGCATGTCTTGTCAAAGACACATTGCATATATaGAGGCAGCCGGTTAAGATCCCATTACTTGGCTGGGCCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: VQTSSACLVKDTLHI*RQPVKIPLLGWAWQ Trigger: CTGCCAGGCCCAGCCAAGTAATGGGATCTTAACCGGCTGCCTTCATATATGCAATGTGTCTTTGACAAGACATGCAGAACTTGTCTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR TCA 90 bp | CCTGCTGAACTGTGCGAATACTATGATCACCAGCCTGTTTCTGATTaGCAATCAGAGATGCGTCATTGCACAGTGCTGACTCCCTTAGCA | + |
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Preference number: 1 (lower is better) Translates to: PAELCEYYDHQPVSD*QSEMRHCTVLTPLA Trigger: TGCTAAGGGAGTCAGCACTGTGCAATGACGCATCTCTGATTGTCAATCAGAAACAGGCTGGTGATCATAGTATTCGCACAGTTCAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR GCA 90 bp | ATTTCATTTCCACCCAGAGCAAATCGGTTAGCTTACTTGTTCATCTaGTCACCATGTGTCTCTGGAGCACTGACAACACAGCAGGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: ISFPPRANRLAYLFI*SPCVSGALTTQQGV Trigger: GACACCCTGCTGTGTTGTCAGTGCTCCAGAGACACATGGTGAGCAGATGAACAAGTAAGCTAACCGATTTGCTCTGGGTGGAAATGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR TCA 90 bp | GGTAGAAAGCAGCCTTGTCTCGTTGGTAAATTAATCTTGTGCCGGTaGAAGATGATACCATCCTGGTTACAGCATCAATGCCCCACTCTG | + |
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Preference number: 1 (lower is better) Translates to: GRKQPCLVGKLILCR*KMIPSWLQHQCPTL Trigger: CAGAGTGGGGCATTGATGCTGTAACCAGGATGGTATCATCTTTCACCGGCACAAGATTAATTTACCAACGAGACAAGGCTGCTTTCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR GCA 90 bp | GACTCGGCACATACTAGCAGCCTCATCAGTCTCATGATAATTATGTaGAGTGAAATGAGCTCTCTGAGAAGAGCACACTGCATGCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: DSAHTSSLISLMIIM*SEMSSLRRAHCMLQ Trigger: CTGAAGCATGCAGTGTGCTCTTCTCAGAGAGCTCATTTCACTGCACATAATTATCATGAGACTGATGAGGCTGCTAGTATGTGCCGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR CCA 90 bp | CTTATTAACAGGCAAAACCACGGCAGCAACTCAAATGTCCATCAGTaGCTGAAGGGACAAAGCTATTCCAAGAAATGTCTCCGCTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: LINRQNHGSNSNVHQ*LKGQSYSKKCLRSE Trigger: CTCAGAGCGGAGACATTTCTTGGAATAGCTTTGTCCCTTCAGCCACTGATGGACATTTGAGTTGCTGCCGTGGTTTTGCCTGTTAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR TCA 90 bp | TTACCTAGGGAGAAGGAAGCATATGTGCACACAGAGGCTTGTATCTaGATGCTCACAACAGTCTTATTAACAGGCAAAACCACGGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LPREKEAYVHTEACI*MLTTVLLTGKTTAA Trigger: TGCTGCCGTGGTTTTGCCTGTTAATAAGACTGTTGTGAGCATTCAGATACAAGCCTCTGTGTGCACATATGCTTCCTTCTCCCTAGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR TCA 90 bp | CAAGACAATGAACATCAGGTGATGGAAGACAGGAAACAGATCATGTaGGCGCTAAGACTGTCCCATTGTGCAAGAGGGACAATTCAGGTA | + |
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Preference number: 1 (lower is better) Translates to: QDNEHQVMEDRKQIM*ALRLSHCARGTIQV Trigger: TACCTGAATTGTCCCTCTTGCACAATGGGACAGTCTTAGCGCTCACATGATCTGTTTCCTGTCTTCCATCACCTGATGTTCATTGTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR GCA 90 bp | ATACCCTTTAAAAACGCCGAAAGATTTGGACAGCTCAGAAGGATCTaGAAGCTATCAGGAAGTATGAAGAGAGGCCTAGCCCAGAAACCT | + |
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Preference number: 1 (lower is better) Translates to: IPFKNAERFGQLRRI*KLSGSMKRGLAQKP Trigger: AGGTTTCTGGGCTAGGCCTCTCTTCATACTTCCTGATAGCTTGCAGATCCTTCTGAGCTGTCCAAATCTTTCGGCGTTTTTAAAGGGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR GCA 90 bp | GTTCACGGAGCCCCATGGCTTGAAGAATGCCAGAAGGATCGTATTTaGGTATCTTTAAGAAAGGCAGTTTTTCCAAGACAATTCTCATGG | + |
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Preference number: 1 (lower is better) Translates to: VHGAPWLEECQKDRI*VSLRKAVFPRQFSW Trigger: CCATGAGAATTGTCTTGGAAAAACTGCCTTTCTTAAAGATACGCAAATACGATCCTTCTGGCATTCTTCAAGCCATGGGGCTCCGTGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR TCA 90 bp | CAATCCAATGAGAAGGGAACCATACAGTCTTGGAATACAAGGTGCTaGGATGAACTCGGATCAGGTTTCATTTCATTTCATTTCCACCCA | + |
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Preference number: 1 (lower is better) Translates to: QSNEKGTIQSWNTRC*DELGSGFISFHFHP Trigger: TGGGTGGAAATGAAATGAAATGAAACCTGATCCGAGTTCATCTCAGCACCTTGTATTCCAAGACTGTATGGTTCCCTTCTCATTGGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR CCA 90 bp | ATTTGCGTATCTTTAAGAAAGGCAGTTTTTCCAAGACAATTCTCATaGAAGCCAGTCCTGTCCAGACTCCAAGGGACAAGAATCGATGAA | + |
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Preference number: 1 (lower is better) Translates to: ICVSLRKAVFPRQFS*KPVLSRLQGTRIDE Trigger: TTCATCGATTCTTGTCCCTTGGAGTCTGGACAGGACTGGCTTCCATGAGAATTGTCTTGGAAAAACTGCCTTTCTTAAAGATACGCAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR GCA 90 bp | GTTTCACAGTCCTATAAGATAAGCAACACAAGTACAGACAAGTTCTaGATGTCTTGTCAAAGACACATTGCATATATGAAGGCAGCCGGT | + |
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Preference number: 1 (lower is better) Translates to: VSQSYKISNTSTDKF*MSCQRHIAYMKAAG Trigger: ACCGGCTGCCTTCATATATGCAATGTGTCTTTGACAAGACATGCAGAACTTGTCTGTACTTGTGTTGCTTATCTTATAGGACTGTGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGACAGGCCAAGGGCATTCCCTCCAGGGCTTTCTGACCAAGGCAGCTGCTGGCCTAGCCCAGAAACCTaGGATCAGAAGCGGCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: GDRPRAFPPGLSDQGSCWPSPET*DQKRPQ Trigger: TTGAGGCCGCTTCTGATCTCAGGTTTCTGGGCTAGG...CCAGCAGCTGCCTTGGTCAGAAAGCCCTGGAGGGAATGCCCTTGGCCTGTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTTACTTGCCTTTCCTCCCATCATCAAGCATTCTTGGGAAAACTCTTTTGGCCACCTGCGGGGGCAGTaGACACCAGGAGGGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: PLLAFPPIIKHSWENSFGHLRGQ*TPGGQA Trigger: TGCCTGCCCTCCTGGTGTTCACTGCCCCCGCAGGTG...GCCAAAAGAGTTTTCCCAAGAATGCTTGATGATGGGAGGAAAGGCAAGTAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR CAA 90 bp | CCAGGCGGATGTTTTGAACATTTCCTTCCCAGTTCGTGCCAGTATTaGGATGTCTGGGGAGCTCCTGCAGTGGGTCTGGCTAGAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: PGGCFEHFLPSSCQY*DVWGAPAVGLARGS Trigger: GCTTCCTCTAGCCAGACCCACTGCAGGAGCTCCCCAGACATCCAAATACTGGCACGAACTGGGAAGGAAATGTTCAAAACATCCGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR TCA 90 bp | TGCAATGGTCACAGAAATTCGGAAGCTCTCCAGGGAACCCCGAGAAAGGCTCCCTACAAGGTGCTGAGATaGACTCGGATCAGGTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: CNGHRNSEALQGTPRKAPYKVLR*TRIRFH Trigger: ATGAAACCTGATCCGAGTTCATCTCAGCACCTTGTA...GGGAGCCTTTCTCGGGGTTCCCTGGAGAGCTTCCGAATTTCTGTGACCATTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTTACTTGCCTTTCCTCCCATCATCAAGCATTCTTGGGAAAACTCTTTTGGCATCAGGGAACATGGGTaGGTGGCATCTGGCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: PLLAFPPIIKHSWENSFGIREHG*VASGPE Trigger: CTCTGGGCCAGATGCCACCCACCCATGTTCCCTGAT...GCCAAAAGAGTTTTCCCAAGAATGCTTGATGATGGGAGGAAAGGCAAGTAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR GCA 90 bp | CCCTTACTTGCCTTTCCTCCCATCATCAAGCATTCTTGGGAAAACTCTTTTGGCGGGCTGCAGGTGTGGTaGAGTGGTGTTCTTAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PLLAFPPIIKHSWENSFGGLQVW*SGVLSH Trigger: ATGGCTAAGAACACCACTGCACCACACCTGCAGCCC...GCCAAAAGAGTTTTCCCAAGAATGCTTGATGATGGGAGGAAAGGCAAGTAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR CCA 90 bp | TTGACAATCAGAGATGCGTCATTGCACAGTGCTGACTCCCTTAGCAACCTGTTGGTTCGTGCCAGTATTTaGATGTCTGGGGAGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LTIRDASLHSADSLSNLLVRASI*MSGELL Trigger: CAGGAGCTCCCCAGACATCCAAATACTGGCACGAAC...CAACAGGTTGCTAAGGGAGTCAGCACTGTGCAATGACGCATCTCTGATTGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGAGCATTTCACCATTTCCTCACAGTGCACACTTCACATGTGAGTGCTACCCTTGGTTGGGGTCATaGCACTTTCAGGCTGACATA | + |
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Preference number: 2 (lower is better) Translates to: AVSISPFPHSAHFTCECYPWLGS*HFQADI Trigger: TATGTCAGCCTGAAAGTGTCATGACCCCAACCAAGG...GTAGCACTCACATGTGAAGTGTGCACTGTGAGGAAATGGTGAAATGCTCACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGCCTTTCCTCCCATCATCAAGCATTCTTGGGAAAACTCTTTTGGCCATAGGCACCACTGTCACCACTaGGCAATGATGGACCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: LAFPPIIKHSWENSFGHRHHCHH*AMMDPR Trigger: TCTAGGGTCCATCATTGCCCAGTGGTGACAGTGGTG...CCTATGGCCAAAAGAGTTTTCCCAAGAATGCTTGATGATGGGAGGAAAGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGGAACCATACAGTCTTGGAATACAAGGTGCTGAGATGAACTCGGATCAGGGTAAAGGCAAGACCTaGCTCCTGAACACACACATG | + |
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Preference number: 2 (lower is better) Translates to: RREPYSLGIQGAEMNSDQGKGKT*LLNTHM Trigger: CATGTGTGTGTTCAGGAGTCAGGTCTTGCCTTTACC...CTGATCCGAGTTCATCTCAGCACCTTGTATTCCAAGACTGTATGGTTCCCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR CCA 90 bp | ATGATAATTATGTGCAGTGAAATGAGCTCTCTGAGAAGAGCACACTGCATGCTTGGGAACATGGGTGGGTaGCATCTGGCCCAGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: MIIMCSEMSSLRRAHCMLGNMGG*HLAQRK Trigger: CTTTCTCTGGGCCAGATGCCACCCACCCATGTTCCC...AAGCATGCAGTGTGCTCTTCTCAGAGAGCTCATTTCACTGCACATAATTATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR TCA 90 bp | AAATGTGAAAGAGGATGGAAACACCGAGCAGCATTCAGCACTGGAAAGAACGGGGAAATGTCTCCGCTCTaGGAAGACAACACAAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: KCERGWKHRAAFSTGKNGEMSPL*EDNTKD Trigger: GTCTTTTGTGTTGTCTTCTCAGAGCGGAGACATTTC...CCCGTTCTTTCCAGTGCTGAATGCTGCTCGGTGTTTCCATCCTCTTTCACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR CCA 90 bp | CAAGCAAATGTGAAAGAGGATGGAAACACCGAGCAGCATTCAGCACTGGAAAGAGTTCTCAACCTTGGTTaGGGTCATGACACTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: QANVKEDGNTEQHSALERVLNLG*GHDTFR Trigger: CCTGAAAGTGTCATGACCCCAACCAAGGTTGAGAAC...TCTTTCCAGTGCTGAATGCTGCTCGGTGTTTCCATCCTCTTTCACATTTGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR CCA 90 bp | CATACAGGGAATGACAAAATCACTCAATGGTGTACTTCTCCTAACACATTCCCCGAGGAAGCGGGTCCCTaGGAACAGGTCTTTGATTTC | + |
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Preference number: 2 (lower is better) Translates to: HTGNDKITQWCTSPNTFPEEAGP*EQVFDF Trigger: GAAATCAAAGACCTGTTCCCAGGGACCCGCTTCCTC...GGGGAATGTGTTAGGAGAAGTACACCATTGAGTGATTTTGTCATTCCCTGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR CCA 90 bp | GATCAGGTTTCATTTCATTTCATTTCCACCCAGAGCAAATCGGTTAGCTTACTTGACCAAGGCAGCTGCTaGCTCCTTCGGGGAATAGCT | + |
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Preference number: 2 (lower is better) Translates to: DQVSFHFISTQSKSVSLLDQGSC*LLRGIA Trigger: AGCTATTCCCCGAAGGAGCCAGCAGCTGCCTTGGTC...AAGTAAGCTAACCGATTTGCTCTGGGTGGAAATGAAATGAAATGAAACCTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTTACTTGCCTTTCCTCCCATCATCAAGCATTCTTGGGAAAACTCTTTTGGCCCAAGACAATTCTCATaGAAGCCAGTCCTGTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: PLLAFPPIIKHSWENSFGPRQFS*KPVLSR Trigger: TCTGGACAGGACTGGCTTCCATGAGAATTGTCTTGG...GCCAAAAGAGTTTTCCCAAGAATGCTTGATGATGGGAGGAAAGGCAAGTAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR CCA 90 bp | TTGACAATCAGAGATGCGTCATTGCACAGTGCTGACTCCCTTAGCAACCTGTTGGTCTGCCAAGTTGTTTaGCACAAAAGCACCCATTTG | + |
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Preference number: 2 (lower is better) Translates to: LTIRDASLHSADSLSNLLVCQVV*HKSTHL Trigger: CAAATGGGTGCTTTTGTGCCAAACAACTTGGCAGAC...CAACAGGTTGCTAAGGGAGTCAGCACTGTGCAATGACGCATCTCTGATTGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR GCA 90 bp | CTTGCCTTTCCTCCCATCATCAAGCATTCTTGGGAAAACTCTTTTGGCCATAGGCTGAGAAGAGCACACTaGATGCTTCAGTTTATGTAC | + |
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Preference number: 2 (lower is better) Translates to: LAFPPIIKHSWENSFGHRLRRAH*MLQFMY Trigger: GTACATAAACTGAAGCATGCAGTGTGCTCTTCTCAG...CCTATGGCCAAAAGAGTTTTCCCAAGAATGCTTGATGATGGGAGGAAAGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR CCA 90 bp | GATCAGGTTTCATTTCATTTCATTTCCACCCAGAGCAAATCGGTTAGCTTACTTCGCACACACACAGATTaGGACACCACTGTCACCACT | + |
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Preference number: 2 (lower is better) Translates to: DQVSFHFISTQSKSVSLLRTHTD*DTTVTT Trigger: AGTGGTGACAGTGGTGTCCCAATCTGTGTGTGTGCG...AAGTAAGCTAACCGATTTGCTCTGGGTGGAAATGAAATGAAATGAAACCTGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR CAA 90 bp | TTTCATTTCATTTCATTTCCACCCAGAGCAAATCGGTTAGCTTACTaGTTCATCTGCTCACCATGTGTCTCTGGAGCACTGACAACACAG | + |
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Preference number: 2 (lower is better) Translates to: FHFISFPPRANRLAY*FICSPCVSGALTTQ Trigger: CTGTGTTGTCAGTGCTCCAGAGACACATGGTGAGCAGATGAACAAGTAAGCTAACCGATTTGCTCTGGGTGGAAATGAAATGAAATGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCTTTCCTCCCATCATCAAGCATTCTTGGGAAAACTCTTTTGGCCATAGGGATAATTATGTGCAGTaGAATGAGCTCTCTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LAFPPIIKHSWENSFGHRDNYVQ*NELSEK Trigger: CTTCTCAGAGAGCTCATTTCACTGCACATAATTATC...CCTATGGCCAAAAGAGTTTTCCCAAGAATGCTTGATGATGGGAGGAAAGGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR GCA 90 bp | AAACATTTAGACAAGGGAGGATTTGTTCAACTTGCAGTTAACGGATCCAACCGATTCCTTCCCAGTTCGTaGCAGTATTTGGATGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KHLDKGGFVQLAVNGSNRFLPSS*QYLDVW Trigger: CCAGACATCCAAATACTGGCACGAACTGGGAAGGAA...TCGGTTGGATCCGTTAACTGCAAGTTGAACAAATCCTCCCTTGTCTAAATGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| 3UTR-3UTR TCA 90 bp | GATCAGGTTTCATTTCATTTCATTTCCACCCAGAGCAAATCGGTTAGCTTACTTAGGAAACAGATCATGTaGGCGCTAAGACTGTCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: DQVSFHFISTQSKSVSLLRKQIM*ALRLSH Trigger: ATGGGACAGTCTTAGCGCTCACATGATCTGTTTCCT...AAGTAAGCTAACCGATTTGCTCTGGGTGGAAATGAAATGAAATGAAACCTGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAGCAAATGTGAAAGAGGATGGAAACACCGAGCAGCATTCAGCACTGGAAAGACTCATGATAATTATGTaGAGTGAAATGAGCTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QANVKEDGNTEQHSALERLMIIM*SEMSSL Trigger: CAGAGAGCTCATTTCACTGCACATAATTATCATGAG...TCTTTCCAGTGCTGAATGCTGCTCGGTGTTTCCATCCTCTTTCACATTTGCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR GCA 90 bp | CATACAGGGAATGACAAAATCACTCAATGGTGTACTTCTCCTAACACATTCCCCAGAAGGAAGCATATGTaGACACAGAGGCTTGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: HTGNDKITQWCTSPNTFPRRKHM*TQRLVS Trigger: AGATACAAGCCTCTGTGTGCACATATGCTTCCTTCT...GGGGAATGTGTTAGGAGAAGTACACCATTGAGTGATTTTGTCATTCCCTGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTCATTTCATTTCCACCCAGAGCAAATCGGTTAGCTTACTTGTTCATCTGCTCCAGCTCAGAAGGATCTaGAAGCTATCAGGAAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: FHFISTQSKSVSLLVHLLQLRRI*KLSGSM Trigger: CATACTTCCTGATAGCTTGCAGATCCTTCTGAGCTG...GAGCAGATGAACAAGTAAGCTAACCGATTTGCTCTGGGTGGAAATGAAATGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTGCCTTTCCTCCCATCATCAAGCATTCTTGGGAAAACTCTTTTGGCCATAGGATCCCTAAAATTGTCTaGCAAGTTGTTTGGCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: LAFPPIIKHSWENSFGHRIPKIV*QVVWHK Trigger: TTTGTGCCAAACAACTTGGCAGACAATTTTAGGGAT...CCTATGGCCAAAAGAGTTTTCCCAAGAATGCTTGATGATGGGAGGAAAGGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTTGCGTATCTTTAAGAAAGGCAGTTTTTCCAAGACAATTCTCATGGAAGCCATCCAGGCGGATGTTTTaGACATTTCCTTCCCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: ICVSLRKAVFPRQFSWKPSRRMF*TFPSQF Trigger: GAACTGGGAAGGAAATGTTCAAAACATCCGCCTGGA...TGGCTTCCATGAGAATTGTCTTGGAAAAACTGCCTTTCTTAAAGATACGCAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTTGCGTATCTTTAAGAAAGGCAGTTTTTCCAAGACAATTCTCATGGAAGCCAGTCTATCCAATCCAATaGGAAGGGAACCATACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: ICVSLRKAVFPRQFSWKPVYPIQ*EGNHTV Trigger: GACTGTATGGTTCCCTTCTCATTGGATTGGATAGAC...TGGCTTCCATGAGAATTGTCTTGGAAAAACTGCCTTTCTTAAAGATACGCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR CCA 90 bp | GATCAGGTTTCATTTCATTTCATTTCCACCCAGAGCAAATCGGTTAGCTTACTTTCAAATGTCCATCAGTaGCTGAAGGGACAAAGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: DQVSFHFISTQSKSVSLLSNVHQ*LKGQSY Trigger: ATAGCTTTGTCCCTTCAGCCACTGATGGACATTTGA...AAGTAAGCTAACCGATTTGCTCTGGGTGGAAATGAAATGAAATGAAACCTGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTTGCGTATCTTTAAGAAAGGCAGTTTTTCCAAGACAATTCTCATGGAAGCCAAAACGCCGAAAGATTTaGACAGCTCAGAAGGATCTG | + |
|
Preference number: 2 (lower is better) Translates to: ICVSLRKAVFPRQFSWKPKRRKI*TAQKDL Trigger: CAGATCCTTCTGAGCTGTCCAAATCTTTCGGCGTTT...TGGCTTCCATGAGAATTGTCTTGGAAAAACTGCCTTTCTTAAAGATACGCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTCATTTCATTTCCACCCAGAGCAAATCGGTTAGCTTACTTGTTCATCTGCTCTCAGTTTATGTACAGTaGAAGCAATGTAAGATCAGG | + |
|
Preference number: 2 (lower is better) Translates to: FHFISTQSKSVSLLVHLLSVYVQ*KQCKIR Trigger: CCTGATCTTACATTGCTTGCACTGTACATAAACTGA...GAGCAGATGAACAAGTAAGCTAACCGATTTGCTCTGGGTGGAAATGAAATGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | TCAGAAGCGGCCTCAAGTCTACACCTGCGGGGGCAGTaGACACCAGGAGGGCAGGCAAGGTGGCTCTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SEAASSLHLRGQ*TPGGQARWLCG Trigger: CCCACAGAGCCACCTTGCCTGCCCTCCTGGTGTTCACTGCCCCCGCAGGTGTAGACTTGAGGCCGCTTCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | GCAGTGAACACCAGGAGGGCAGGCAAGGTGGCTCTGTaGGTAAGGGGGCTTGACACCAAGTCTGATGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: AVNTRRAGKVAL*VRGLDTKSDDP Trigger: TGGGTCATCAGACTTGGTGTCAAGCCCCCTTACCCACAGAGCCACCTTGCCTGCCCTCCTGGTGTTCACTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | CTGGCTAGAGGAAGCGGGTCCCTGGGAACAGGTCTTTaGTTTCGGTGCTGGTCTGTTTTCTCTGCCGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LARGSGSLGTGL*FRCWSVFSAGH Trigger: GTGGCCGGCAGAGAAAACAGACCAGCACCGAAATCAAAGACCTGTTCCCAGGGACCCGCTTCCTCTAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR GCA 72 bp | AGGGCATTCCCTCCAGGGCTTTCTGACCAAGGCAGCTaGTGGCTCCTTCGGGGAATAGCTACAGAGCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RAFPPGLSDQGS*WLLRGIATEQE Trigger: TTCCTGCTCTGTAGCTATTCCCCGAAGGAGCCAGCAGCTGCCTTGGTCAGAAAGCCCTGGAGGGAATGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | GCATTCCCTCCAGGGCTTTCTGACCAAGGCAGCTGCTaGCTCCTTCGGGGAATAGCTACAGAGCAGGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: AFPPGLSDQGSC*LLRGIATEQET Trigger: GGTTTCCTGCTCTGTAGCTATTCCCCGAAGGAGCCAGCAGCTGCCTTGGTCAGAAAGCCCTGGAGGGAATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR GCA 72 bp | CACCCATTTGAGGGGTGTTCTGGGCTGCAGGTGTGGTaGAGTGGTGTTCTTAGCCATCCTGGACAAAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HPFEGCSGLQVW*SGVLSHPGQRP Trigger: TGGCCTTTGTCCAGGATGGCTAAGAACACCACTGCACCACACCTGCAGCCCAGAACACCCCTCAAATGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | AGTATTTGGATGTCTGGGGAGCTCCTGCAGTGGGTCTaGCTAGAGGAAGCGGGTCCCTGGGAACAGGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SIWMSGELLQWV*LEEAGPWEQVF Trigger: AAAGACCTGTTCCCAGGGACCCGCTTCCTCTAGCCAGACCCACTGCAGGAGCTCCCCAGACATCCAAATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | AGCCATCCTGGACAAAGGCCAGGACGGTGTGATACATaGGCTTTAAGCCCCGTGGACAAAGGGAGGGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SHPGQRPGRCDT*ALSPVDKGRVK Trigger: CTTCACCCTCCCTTTGTCCACGGGGCTTAAAGCTCATGTATCACACCGTCCTGGCCTTTGTCCAGGATGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR GCA 72 bp | TGGCACAAAAGCACCCATTTGAGGGGTGTTCTGGGCTaGAGGTGTGGTGCAGTGGTGTTCTTAGCCATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: WHKSTHLRGVLG*RCGAVVFLAIL Trigger: CAGGATGGCTAAGAACACCACTGCACCACACCTGCAGCCCAGAACACCCCTCAAATGGGTGCTTTTGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | AAGCACCCATTTGAGGGGTGTTCTGGGCTGCAGGTGTaGTGCAGTGGTGTTCTTAGCCATCCTGGACAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KHPFEGCSGLQV*CSGVLSHPGQR Trigger: CCTTTGTCCAGGATGGCTAAGAACACCACTGCACCACACCTGCAGCCCAGAACACCCCTCAAATGGGTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | ATCAGGAAGTATGAAGAGAGGCCTAGCCCAGAAACCTaGGATCAGAAGCGGCCTCAAGTCTACACCTGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: IRKYEERPSPET*DQKRPQVYTCG Trigger: CCCGCAGGTGTAGACTTGAGGCCGCTTCTGATCTCAGGTTTCTGGGCTAGGCCTCTCTTCATACTTCCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | CAGGTAATGTGCTGCCGAGGAGAACTGCATCTGCAATaGTCACAGAAATTCGGAAGCTCTCCAGGGAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: QVMCCRGELHLQ*SQKFGSSPGNP Trigger: GGGGTTCCCTGGAGAGCTTCCGAATTTCTGTGACCATTGCAGATGCAGTTCTCCTCGGCAGCACATTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | AGTGCAAGCAATGTAAGATCAGGGAACATGGGTGGGTaGCATCTGGCCCAGAGAAAGGGATGTCAAAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SASNVRSGNMGG*HLAQRKGCQRV Trigger: GACCCTTTGACATCCCTTTCTCTGGGCCAGATGCCACCCACCCATGTTCCCTGATCTTACATTGCTTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | TTTGGTCACAGCTACGCAAAAAGTAAGGGGGTAGGGTaGGAAGGCAGGCAGACACACATGCACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: FGHSYAKSKGVG*EGRQTHMHTHT Trigger: TGTGTGTGTGTGCATGTGTGTCTGCCTGCCTTCCCACCCTACCCCCTTACTTTTTGCGTAGCTGTGACCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCAATGGTCACAGAAATTCGGAAGCTCTCCAGGGAACCCCGAGAAAGGCTCCCTTCCAGGCGGATGTTTaGAACATTTCCTTCCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CNGHRNSEALQGTPRKAPFQADV*NISFPV Trigger: AACTGGGAAGGAAATGTTCAAAACATCCGCCTGGAA...GGGAGCCTTTCTCGGGGTTCCCTGGAGAGCTTCCGAATTTCTGTGACCATTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | ACTTGTTCATCTGCTCACCATGTGTCTCTGGAGCACTaGCAACACAGCAGGGTGTCCAAGAGTTACAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: TCSSAHHVSLEH*QHSRVSKSYRT Trigger: GGTCCTGTAACTCTTGGACACCCTGCTGTGTTGTCAGTGCTCCAGAGACACATGGTGAGCAGATGAACAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | GTTTTGAACATTTCCTTCCCAGTTCGTGCCAGTATTTaGATGTCTGGGGAGCTCCTGCAGTGGGTCTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VLNISFPVRASI*MSGELLQWVWL Trigger: TAGCCAGACCCACTGCAGGAGCTCCCCAGACATCCAAATACTGGCACGAACTGGGAAGGAAATGTTCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR GCA 72 bp | CCACCCAGAGCAAATCGGTTAGCTTACTTGTTCATCTaGTCACCATGTGTCTCTGGAGCACTGACAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: PPRANRLAYLFI*SPCVSGALTTQ Trigger: CTGTGTTGTCAGTGCTCCAGAGACACATGGTGAGCAGATGAACAAGTAAGCTAACCGATTTGCTCTGGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | GAACATCAGGTGATGGAAGACAGGAAACAGATCATGTaGGCGCTAAGACTGTCCCATTGTGCAAGAGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: EHQVMEDRKQIM*ALRLSHCARGT Trigger: TGTCCCTCTTGCACAATGGGACAGTCTTAGCGCTCACATGATCTGTTTCCTGTCTTCCATCACCTGATGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR GCA 72 bp | TCACCATTTCCTCACAGTGCACACTTCACATGTGAGTaGTACCTGTCCTGTTACAGTCTAGAGCAACGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SPFPHSAHFTCE*YLSCYSLEQRF Trigger: GAACCGTTGCTCTAGACTGTAACAGGACAGGTAGCACTCACATGTGAAGTGTGCACTGTGAGGAAATGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | GTTAGCTTACTTGTTCATCTGCTCACCATGTGTCTCTaGAGCACTGACAACACAGCAGGGTGTCCAAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VSLLVHLLTMCL*STDNTAGCPRV Trigger: AACTCTTGGACACCCTGCTGTGTTGTCAGTGCTCCAGAGACACATGGTGAGCAGATGAACAAGTAAGCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGCAGCTGCCAACCAATTCAGCATGTGGTAGAAAGCAGCCTTGTCTCGTTCATCATCAAGCATTCTaGGGAAAACTCTTTTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TQQLPTNSACGRKQPCLVHHQAF*GKLFWP Trigger: TGGCCAAAAGAGTTTTCCCAAGAATGCTTGATGATG...AACGAGACAAGGCTGCTTTCTACCACATGCTGAATTGGTTGGCAGCTGCTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCAAATGTGAAAGAGGATGGAAACACCGAGCAGCATTCAGCACTGGAAAGATGTGCACACAGAGGCTaGTATCTGAATGCTCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: QANVKEDGNTEQHSALERCAHRG*YLNAHN Trigger: GTTGTGAGCATTCAGATACAAGCCTCTGTGTGCACA...TCTTTCCAGTGCTGAATGCTGCTCGGTGTTTCCATCCTCTTTCACATTTGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGACAATCAGAGATGCGTCATTGCACAGTGCTGACTCCCTTAGCAACCTGTTGAAAACGCCGAAAGATTaGGACAGCTCAGAAGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: LTIRDASLHSADSLSNLLKTPKD*DSSEGS Trigger: AGATCCTTCTGAGCTGTCCAAATCTTTCGGCGTTTT...CAACAGGTTGCTAAGGGAGTCAGCACTGTGCAATGACGCATCTCTGATTGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR CAA 90 bp | CATACAGGGAATGACAAAATCACTCAATGGTGTACTTCTCCTAACACATTCCCCGGAAACCATGGCGATTaGAATGAGGTTTCCAGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: HTGNDKITQWCTSPNTFPGNHGD*NEVSRR Trigger: CCGCCTGGAAACCTCATTCAAATCGCCATGGTTTCC...GGGGAATGTGTTAGGAGAAGTACACCATTGAGTGATTTTGTCATTCCCTGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | CATTTCACCATTTCCTCACAGTGCACACTTCACATGTaGGTGCTACCTGTCCTGTTACAGTCTAGAGCAACG | + |
|
Preference number: 3 (lower is better) Translates to: HFTISSQCTLHM*VLPVLLQSRAT Trigger: CGTTGCTCTAGACTGTAACAGGACAGGTAGCACTCACATGTGAAGTGTGCACTGTGAGGAAATGGTGAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | CACACAGATTGGGACACCACTGTCACCACTGGGCAATaGTGGACCCTAGATGAACAAATACAGAAGACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: HTDWDTTVTTGQ*WTLDEQIQKTD Trigger: ATCTGTCTTCTGTATTTGTTCATCTAGGGTCCATCATTGCCCAGTGGTGACAGTGGTGTCCCAATCTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | AAGGATAATGGGGCAGATCATAGGAAAGTCAGTCAGTaGTGTGAAGCCAGAGGACTAGGTCTCACTGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: KDNGADHRKVSQ*CEARGLGLTET Trigger: AGTCTCAGTGAGACCTAGTCCTCTGGCTTCACATCACTGACTGACTTTCCTATGATCTGCCCCATTATCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR GCA 72 bp | GAGAAGAGCACACTGCATGCTTCAGTTTATGTACAGTaGAAGCAATGTAAGATCAGGGAACATGGGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: EKSTLHASVYVQ*KQCKIREHGWV Trigger: CACCCACCCATGTTCCCTGATCTTACATTGCTTGCACTGTACATAAACTGAAGCATGCAGTGTGCTCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR GCA 72 bp | CACACTGATGCTTACCTAGGGAGAAGGAAGCATATGTaGACACAGAGGCTTGTATCTGAATGCTCACAACAG | + |
|
Preference number: 3 (lower is better) Translates to: HTDAYLGRRKHM*TQRLVSECSQQ Trigger: CTGTTGTGAGCATTCAGATACAAGCCTCTGTGTGCACATATGCTTCCTTCTCCCTAGGTAAGCATCAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR GCA 72 bp | AAAAACGCCGAAAGATTTGGACAGCTCAGAAGGATCTaGAAGCTATCAGGAAGTATGAAGAGAGGCCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KNAERFGQLRRI*KLSGSMKRGLA Trigger: GGCTAGGCCTCTCTTCATACTTCCTGATAGCTTGCAGATCCTTCTGAGCTGTCCAAATCTTTCGGCGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | AGGCAAAACCACGGCAGCAACTCAAATGTCCATCAGTaGCTGAAGGGACAAAGCTATTCCAAGAAATGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RQNHGSNSNVHQ*LKGQSYSKKCL Trigger: GAGACATTTCTTGGAATAGCTTTGTCCCTTCAGCCACTGATGGACATTTGAGTTGCTGCCGTGGTTTTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | GAAGGGACAAAGCTATTCCAAGAAATGTCTCCGCTCTaGGAAGACAACACAAAAGACTCGGCACATACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: EGTKLFQEMSPL*EDNTKDSAHTS Trigger: GCTAGTATGTGCCGAGTCTTTTGTGTTGTCTTCTCAGAGCGGAGACATTTCTTGGAATAGCTTTGTCCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | CACCACTGTCACCACTGGGCAATGATGGACCCTAGATaGACAAATACAGAAGACAGATCCAAACCAGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: HHCHHWAMMDPR*TNTEDRSKPVQ Trigger: TTGTACTGGTTTGGATCTGTCTTCTGTATTTGTTCATCTAGGGTCCATCATTGCCCAGTGGTGACAGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | CATGGCGATTTGAATGAGGTTTCCAGGCGGATGTTTTaGACATTTCCTTCCCAGTTCGTGCCAGTATTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: HGDLNEVSRRMF*TFPSQFVPVFG Trigger: TCCAAATACTGGCACGAACTGGGAAGGAAATGTTCAAAACATCCGCCTGGAAACCTCATTCAAATCGCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | CTGTGCGAATACTATGATCACCAGCCTGTTTCTGATTaGCAATCAGAGATGCGTCATTGCACAGTGCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: LCEYYDHQPVSD*QSEMRHCTVLT Trigger: AGTCAGCACTGTGCAATGACGCATCTCTGATTGTCAATCAGAAACAGGCTGGTGATCATAGTATTCGCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR-3UTR CAA 90 bp | GATCAGGTTTCATTTCATTTCATTTCCACCCAGAGCAAATCGGTTAGCTTACTTAGTTCGTGCCAGTATTaGGATGTCTGGGGAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: DQVSFHFISTQSKSVSLLSSCQY*DVWGAP Trigger: AGGAGCTCCCCAGACATCCAAATACTGGCACGAACT...AAGTAAGCTAACCGATTTGCTCTGGGTGGAAATGAAATGAAATGAAACCTGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | ATGCTAATCATATCCCACACTCAAGACACATCACACTaGTGCTTACCTAGGGAGAAGGAAGCATATGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: MLIISHTQDTSH*CLPREKEAYVH Trigger: GTGCACATATGCTTCCTTCTCCCTAGGTAAGCATCAGTGTGATGTGTCTTGAGTGTGGGATATGATTAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | AGTTCTGCATGTCTTGTCAAAGACACATTGCATATATaGAGGCAGCCGGTTAAGATCCCATTACTTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSACLVKDTLHI*RQPVKIPLLGW Trigger: CCAGCCAAGTAATGGGATCTTAACCGGCTGCCTTCATATATGCAATGTGTCTTTGACAAGACATGCAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | CAGCCTTGTCTCGTTGGTAAATTAATCTTGTGCCGGTaGAAGATGATACCATCCTGGTTACAGCATCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: QPCLVGKLILCR*KMIPSWLQHQC Trigger: GCATTGATGCTGTAACCAGGATGGTATCATCTTTCACCGGCACAAGATTAATTTACCAACGAGACAAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR GCA 72 bp | CATACTAGCAGCCTCATCAGTCTCATGATAATTATGTaGAGTGAAATGAGCTCTCTGAGAAGAGCACACTGC | + |
|
Preference number: 3 (lower is better) Translates to: HTSSLISLMIIM*SEMSSLRRAHC Trigger: GCAGTGTGCTCTTCTCAGAGAGCTCATTTCACTGCACATAATTATCATGAGACTGATGAGGCTGCTAGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | TCTTTAAGAAAGGCAGTTTTTCCAAGACAATTCTCATaGAAGCCAGTCCTGTCCAGACTCCAAGGGACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLRKAVFPRQFS*KPVLSRLQGTR Trigger: TCTTGTCCCTTGGAGTCTGGACAGGACTGGCTTCCATGAGAATTGTCTTGGAAAAACTGCCTTTCTTAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | CCCTTACTTGCCTTTCCTCCCATCATCAAGCATTCTTaGGAAAACTCTTTTGGCCATAGGAGATCCCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PLLAFPPIIKHS*ENSFGHRRSLK Trigger: TTTTAGGGATCTCCTATGGCCAAAAGAGTTTTCCCAAGAATGCTTGATGATGGGAGGAAAGGCAAGTAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | GAGAAGGAAGCATATGTGCACACAGAGGCTTGTATCTaGATGCTCACAACAGTCTTATTAACAGGCAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: EKEAYVHTEACI*MLTTVLLTGKT Trigger: GGTTTTGCCTGTTAATAAGACTGTTGTGAGCATTCAGATACAAGCCTCTGTGTGCACATATGCTTCCTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR GCA 72 bp | GCCCCATGGCTTGAAGAATGCCAGAAGGATCGTATTTaGGTATCTTTAAGAAAGGCAGTTTTTCCAAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: APWLEECQKDRI*VSLRKAVFPRQ Trigger: TTGTCTTGGAAAAACTGCCTTTCTTAAAGATACGCAAATACGATCCTTCTGGCATTCTTCAAGCCATGGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | TACGATGTTCATACAGGGAATGACAAAATCACTCAATaGTGTACTTCTCCTAACACATTCCCCCTTGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: YDVHTGNDKITQ*CTSPNTFPLVG Trigger: CCCAACAAGGGGGAATGTGTTAGGAGAAGTACACCATTGAGTGATTTTGTCATTCCCTGTATGAACATCGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | GGGAACCATACAGTCTTGGAATACAAGGTGCTGAGATaGACTCGGATCAGGTTTCATTTCATTTCATTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GNHTVLEYKVLR*TRIRFHFISFP Trigger: TGGAAATGAAATGAAATGAAACCTGATCCGAGTTCATCTCAGCACCTTGTATTCCAAGACTGTATGGTTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | GAGAAGGGAACCATACAGTCTTGGAATACAAGGTGCTaGGATGAACTCGGATCAGGTTTCATTTCATTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: EKGTIQSWNTRC*DELGSGFISFH Trigger: ATGAAATGAAATGAAACCTGATCCGAGTTCATCTCAGCACCTTGTATTCCAAGACTGTATGGTTCCCTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR TCA 72 bp | TTAGATATACAAATCCGTGCAGTCTATCCAATCCAATaGGAAGGGAACCATACAGTCTTGGAATACAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LDIQIRAVYPIQ*EGNHTVLEYKV Trigger: CACCTTGTATTCCAAGACTGTATGGTTCCCTTCTCATTGGATTGGATAGACTGCACGGATTTGTATATCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CCA 72 bp | TTAAAGGGTCTCAGCATTAGGAAGACTGAGAATCGCTaGTCTAGAGATTTTTCTAGTAGAACTATGGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LKGLSIRKTENR*SRDFSSRTMVF Trigger: GAAGACCATAGTTCTACTAGAAAAATCTCTAGACCAGCGATTCTCAGTCTTCCTAATGCTGAGACCCTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR GCA 72 bp | TCCTATAAGATAAGCAACACAAGTACAGACAAGTTCTaGATGTCTTGTCAAAGACACATTGCATATATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SYKISNTSTDKF*MSCQRHIAYMK Trigger: CTTCATATATGCAATGTGTCTTTGACAAGACATGCAGAACTTGTCTGTACTTGTGTTGCTTATCTTATAGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR GCA 72 bp | AATACAACTGGAATTTATATTAGATATACAAATCCGTaGAGTCTATCCAATCCAATGAGAAGGGAACCATAC | + |
|
Preference number: 3 (lower is better) Translates to: NTTGIYIRYTNP*SLSNPMRREPY Trigger: GTATGGTTCCCTTCTCATTGGATTGGATAGACTGCACGGATTTGTATATCTAATATAAATTCCAGTTGTATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | TGCAATGGTCACAGAAATTCGGAAGCTCTCCAGGGAACCCCGAGAAAGGCTCCCTCCTCTACACTCCCGTaGCTCCCAGCACTGACACCG | + |
|
Preference number: 4 (lower is better) Translates to: CNGHRNSEALQGTPRKAPSSTLP*LPALTP Trigger: CGGTGTCAGTGCTGGGAGCCACGGGAGTGTAGAGGA...GGGAGCCTTTCTCGGGGTTCCCTGGAGAGCTTCCGAATTTCTGTGACCATTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR GCA 90 bp | TGCAATGGTCACAGAAATTCGGAAGCTCTCCAGGGAACCCCGAGAAAGGCTCCCGGGATTGCACTGGGCTaGTCTTCCAGCACCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CNGHRNSEALQGTPRKAPGIALG*SSSTFL Trigger: GAGGAAGGTGCTGGAAGAGCAGCCCAGTGCAATCCC...GGGAGCCTTTCTCGGGGTTCCCTGGAGAGCTTCCGAATTTCTGTGACCATTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | GCAGTGAGCATTTCACCATTTCCTCACAGTGCACACTTCACATGTGAGTGCTACGTGAGCAGGGAGGGCTaGGTCCCAGCAGGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVSISPFPHSAHFTCECYVSREG*VPAGSS Trigger: AGAGGAGCCTGCTGGGACCCAGCCCTCCCTGCTCAC...GTAGCACTCACATGTGAAGTGTGCACTGTGAGGAAATGGTGAAATGCTCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR TCA 90 bp | GCAGTGAGCATTTCACCATTTCCTCACAGTGCACACTTCACATGTGAGTGCTACTCATCCTGTAACCGCTaGACCACACCGGCCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVSISPFPHSAHFTCECYSSCNR*TTPARR Trigger: CCTGCGGGCCGGTGTGGTTCAGCGGTTACAGGATGA...GTAGCACTCACATGTGAAGTGTGCACTGTGAGGAAATGGTGAAATGCTCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CAA 72 bp | CATGCACACACACACACACACACGCACACACACAGATaGGGACACCACTGTCACCACTGGGCAATGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HAHTHTHTHTHR*GHHCHHWAMMD Trigger: GTCCATCATTGCCCAGTGGTGACAGTGGTGTCCCAATCTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR TCA 90 bp | GGACAGCTCAGAAGGATCTGCAAGCTATCAGGAAGTATGAAGAGAGGCCTAGCCGCTTGGCGTAGAACTTaGAGTCCACCCCCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQLRRICKLSGSMKRGLAAWRRT*SPPPRS Trigger: ACTTCGAGGGGGTGGACTTCAAGTTCTACGCCAAGC...GGCTAGGCCTCTCTTCATACTTCCTGATAGCTTGCAGATCCTTCTGAGCTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | ACCCAGCAGCTGCCAACCAATTCAGCATGTGGTAGAAAGCAGCCTTGTCTCGTTGTGGCTTGGCAGACCTaGATTTTCTCGGGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TQQLPTNSACGRKQPCLVVAWQT*IFSGPE Trigger: TTCTGGCCCCGAGAAAATCCAGGTCTGCCAAGCCAC...AACGAGACAAGGCTGCTTTCTACCACATGCTGAATTGGTTGGCAGCTGCTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGAACCATACAGTCTTGGAATACAAGGTGCTGAGATGAACTCGGATCAGCCGGGCGGAGGCCAGTaGCTGTCCTTGACTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RREPYSLGIQGAEMNSDQPGGGQ*LSLTDF Trigger: GAAGTCAGTCAAGGACAGCCACTGGCCTCCGCCCGG...CTGATCCGAGTTCATCTCAGCACCTTGTATTCCAAGACTGTATGGTTCCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | ACCCAGCAGCTGCCAACCAATTCAGCATGTGGTAGAAAGCAGCCTTGTCTCGTTGAGTCCCCTTGCTCTTaGTTCTTTCCCAAAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQQLPTNSACGRKQPCLVESPCS*FFPKEA Trigger: GGCCTCTTTGGGAAAGAACCAAGAGCAAGGGGACTC...AACGAGACAAGGCTGCTTTCTACCACATGCTGAATTGGTTGGCAGCTGCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | GGACAGCTCAGAAGGATCTGCAAGCTATCAGGAAGTATGAAGAGAGGCCTAGCCAACTCTAACCCCAGCTaGGCCTTACTGAGCGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GQLRRICKLSGSMKRGLANSNPS*ALLSET Trigger: AGTCTCGCTCAGTAAGGCCCAGCTGGGGTTAGAGTT...GGCTAGGCCTCTCTTCATACTTCCTGATAGCTTGCAGATCCTTCTGAGCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | GCAGTGAGCATTTCACCATTTCCTCACAGTGCACACTTCACATGTGAGTGCTACTGCGAGGGATTGCACTaGGCTGCTCTTCCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AVSISPFPHSAHFTCECYCEGLH*AALPAP Trigger: AGGTGCTGGAAGAGCAGCCCAGTGCAATCCCTCGCA...GTAGCACTCACATGTGAAGTGTGCACTGTGAGGAAATGGTGAAATGCTCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | CTTGCCTTTCCTCCCATCATCAAGCATTCTTGGGAAAACTCTTTTGGCCATAGGTGCTGTCCGAGTCACTaGGCTCGGGACTGGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LAFPPIIKHSWENSFGHRCCPSH*ARDWSV Trigger: CACACTCCAGTCCCGAGCCCAGTGACTCGGACAGCA...CCTATGGCCAAAAGAGTTTTCCCAAGAATGCTTGATGATGGGAGGAAAGGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAATCGGTTAGCTTACTTGTTCATCTGCTCACCATGTGTCTCTGGAGCACCAGCAGGCTCCTCTTaGTCTGACGCTGAGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RANRLAYLFICSPCVSGAPAGSS*SDAESS Trigger: AGAGGACTCAGCGTCAGAGCAAGAGGAGCCTGCTGG...TGCTCCAGAGACACATGGTGAGCAGATGAACAAGTAAGCTAACCGATTTGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGAACCATACAGTCTTGGAATACAAGGTGCTGAGATGAACTCGGATCAGCTGACCCCTCTCCTCTaGATCCTCTACACTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RREPYSLGIQGAEMNSDQLTPLL*ILYTPV Trigger: CACGGGAGTGTAGAGGATGCAGAGGAGAGGGGTCAG...CTGATCCGAGTTCATCTCAGCACCTTGTATTCCAAGACTGTATGGTTCCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR TCA 90 bp | GATCAGGTTTCATTTCATTTCATTTCCACCCAGAGCAAATCGGTTAGCTTACTTGGGCTTGCAGAGAAGTaGGCAGGGAGGGCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DQVSFHFISTQSKSVSLLGLAEK*AGRAGS Trigger: GGACCCAGCCCTCCCTGCTCACTTCTCTGCAAGCCC...AAGTAAGCTAACCGATTTGCTCTGGGTGGAAATGAAATGAAATGAAACCTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR GCA 90 bp | CAGAAGGATCTGCAAGCTATCAGGAAGTATGAAGAGAGGCCTAGCCCAGAAACCGCAGATTCAACGCTGTaGTCTCCTTCAGTGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: QKDLQAIRKYEERPSPETADSTL*SPSVTR Trigger: ACGTGTCACTGAAGGAGAGCACAGCGTTGAATCTGC...GGTTTCTGGGCTAGGCCTCTCTTCATACTTCCTGATAGCTTGCAGATCCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | AAATGTGAAAGAGGATGGAAACACCGAGCAGCATTCAGCACTGGAAAGAACGGGGATCGGGATCAAATTTaGCCAACTCAGCAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KCERGWKHRAAFSTGKNGDRDQI*PTQQPG Trigger: GCCTGGCTGCTGAGTTGGCCAAATTTGATCCCGATC...CCCGTTCTTTCCAGTGCTGAATGCTGCTCGGTGTTTCCATCCTCTTTCACATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR TCA 90 bp | CATACAGGGAATGACAAAATCACTCAATGGTGTACTTCTCCTAACACATTCCCCGCCAGTGGCTGTCCTTaGCTGACTTCACATCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTGNDKITQWCTSPNTFPASGCP*LTSHPW Trigger: CCAGGGATGTGAAGTCAGTCAAGGACAGCCACTGGC...GGGGAATGTGTTAGGAGAAGTACACCATTGAGTGATTTTGTCATTCCCTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR GCA 90 bp | ACCCAGCAGCTGCCAACCAATTCAGCATGTGGTAGAAAGCAGCCTTGTCTCGTTCACCATTTCTGCATGTaGATCATTCCACCAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TQQLPTNSACGRKQPCLVHHFCM*IIPPRT Trigger: AGTCCTTGGTGGAATGATGCACATGCAGAAATGGTG...AACGAGACAAGGCTGCTTTCTACCACATGCTGAATTGGTTGGCAGCTGCTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | CTTGCCTTTCCTCCCATCATCAAGCATTCTTGGGAAAACTCTTTTGGCCATAGGGGGCAGCCAACTTCTTaGACTTGGCCTTCTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LAFPPIIKHSWENSFGHRGQPTS*TWPSES Trigger: GGATTCAGAAGGCCAAGTCCAAGAAGTTGGCTGCCC...CCTATGGCCAAAAGAGTTTTCCCAAGAATGCTTGATGATGGGAGGAAAGGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | TTGACAATCAGAGATGCGTCATTGCACAGTGCTGACTCCCTTAGCAACCTGTTGGTCCTCTTCCAAAAGTaGGGCTTGCAGAGAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTIRDASLHSADSLSNLLVLFQK*GLQRSE Trigger: CTCACTTCTCTGCAAGCCCCACTTTTGGAAGAGGAC...CAACAGGTTGCTAAGGGAGTCAGCACTGTGCAATGACGCATCTCTGATTGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGAATCGCTGGTCTAGAGATTTTTCTAGTAGAACTATGGTCTTCATTTCTACAATCGCAGGGCACCTaGCCCCTCTCCTCTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LRIAGLEIFLVELWSSFLQSQGT*PLSSAS Trigger: GGATGCAGAGGAGAGGGGTCAGGTGCCCTGCGATTG...TAGAAATGAAGACCATAGTTCTACTAGAAAAATCTCTAGACCAGCGATTCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGAACCATACAGTCTTGGAATACAAGGTGCTGAGATGAACTCGGATCAGGACACCAGGATTTCATaGACGTCTGTCCAGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RREPYSLGIQGAEMNSDQDTRIS*TSVQVS Trigger: TGAGACCTGGACAGACGTTCATGAAATCCTGGTGTC...CTGATCCGAGTTCATCTCAGCACCTTGTATTCCAAGACTGTATGGTTCCCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | TGCAATGGTCACAGAAATTCGGAAGCTCTCCAGGGAACCCCGAGAAAGGCTCCCCACAGGAGTGAAATCTaGATCCTTAATATCGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: CNGHRNSEALQGTPRKAPHRSEI*ILNIDN Trigger: GTTATCGATATTAAGGATCCAGATTTCACTCCTGTG...GGGAGCCTTTCTCGGGGTTCCCTGGAGAGCTTCCGAATTTCTGTGACCATTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR TCA 90 bp | GATCAGGTTTCATTTCATTTCATTTCCACCCAGAGCAAATCGGTTAGCTTACTTGTGGCTGTCCTTGACTaGCTTCACATCCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DQVSFHFISTQSKSVSLLVAVLD*LHIPGW Trigger: CCAGCCAGGGATGTGAAGTCAGTCAAGGACAGCCAC...AAGTAAGCTAACCGATTTGCTCTGGGTGGAAATGAAATGAAATGAAACCTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR TCA 90 bp | TTGACAATCAGAGATGCGTCATTGCACAGTGCTGACTCCCTTAGCAACCTGTTGTGTGCTCTCCTTCAGTaGCACGTACTTCATAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LTIRDASLHSADSLSNLLCALLQ*HVLHSN Trigger: ATTGCTATGAAGTACGTGTCACTGAAGGAGAGCACA...CAACAGGTTGCTAAGGGAGTCAGCACTGTGCAATGACGCATCTCTGATTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR GCA 90 bp | ATGATAATTATGTGCAGTGAAATGAGCTCTCTGAGAAGAGCACACTGCATGCTTACGCTGAGTCCTCTGTaGCAGAGGATGAGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MIIMCSEMSSLRRAHCMLTLSPL*QRMRCC Trigger: ACAGCACCTCATCCTCTGGCACAGAGGACTCAGCGT...AAGCATGCAGTGTGCTCTTCTCAGAGAGCTCATTTCACTGCACATAATTATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | GCAGTGAGCATTTCACCATTTCCTCACAGTGCACACTTCACATGTGAGTGCTACAAACCAGCAGAGTGTTaGACTCAGCTTTCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVSISPFPHSAHFTCECYKPAEC*TQLSDG Trigger: ACCATCAGAAAGCTGAGTCCAACACTCTGCTGGTTT...GTAGCACTCACATGTGAAGTGTGCACTGTGAGGAAATGGTGAAATGCTCACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGAACCATACAGTCTTGGAATACAAGGTGCTGAGATGAACTCGGATCAGTTGCAGAGTACTTTCTaGGACCTCTTCATAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RREPYSLGIQGAEMNSDQLQSTF*DLFIGS Trigger: ACTCCCTATGAAGAGGTCTCAGAAAGTACTCTGCAA...CTGATCCGAGTTCATCTCAGCACCTTGTATTCCAAGACTGTATGGTTCCCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR CCA 90 bp | TTGACAATCAGAGATGCGTCATTGCACAGTGCTGACTCCCTTAGCAACCTGTTGTATTTCTTCCACAAGTaGCTTGGCAGACCTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LTIRDASLHSADSLSNLLYFFHK*LGRPGF Trigger: AAATCCAGGTCTGCCAAGCCACTTGTGGAAGAAATA...CAACAGGTTGCTAAGGGAGTCAGCACTGTGCAATGACGCATCTCTGATTGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| 3UTR CAA 72 bp | ATTTCATTTCCACCCAGAGCAAATCGGTTAGCTTACTaGTTCATCTGCTCACCATGTGTCTCTGGAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ISFPPRANRLAY*FICSPCVSGAL Trigger: CAGTGCTCCAGAGACACATGGTGAGCAGATGAACAAGTAAGCTAACCGATTTGCTCTGGGTGGAAATGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS-3UTR GCA 90 bp | ATGATAATTATGTGCAGTGAAATGAGCTCTCTGAGAAGAGCACACTGCATGCTTAAAAATTCCTTTATCTaGATCATAGGTCCCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MIIMCSEMSSLRRAHCMLKNSFI*IIGPLL Trigger: GAGCAGGGGACCTATGATGCAGATAAAGGAATTTTT...AAGCATGCAGTGTGCTCTTCTCAGAGAGCTCATTTCACTGCACATAATTATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
||
| CDS GCA 90 bp | CTCGGGACTGGAGTGTGGAGCCTGATGCGAGGGATTGCACTGGGCTaGTCTTCCAGCACCTTCCTCCTCCTGGACGAGGAGTGCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGTGVWSLMRGIALG*SSSTFLLLDEECGG Trigger: GCCGCCGCACTCCTCGTCCAGGAGGAGGAAGGTGCTGGAAGAGCAGCCCAGTGCAATCCCTCGCATCAGGCTCCACACTCCAGTCCCGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
||
| CDS GCA 90 bp | AGTCACTGGGCTCGGGACTGGAGTGTGGAGCCTGATGCGAGGGATTaGACTGGGCTGCTCTTCCAGCACCTTCCTCCTCCTGGACGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SHWARDWSVEPDARD*TGLLFQHLPPPGRG Trigger: TCCTCGTCCAGGAGGAGGAAGGTGCTGGAAGAGCAGCCCAGTGCAATCCCTCGCATCAGGCTCCACACTCCAGTCCCGAGCCCAGTGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
||
| CDS GCA 90 bp | GCTCCTCTTGCTCTGACGCTGAGTCCTCTGTGCCAGAGGATGAGGTaGTGTCCGAGTCACTGGGCTCGGGACTGGAGTGTGGAGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: APLALTLSPLCQRMR*CPSHWARDWSVEPD Trigger: ATCAGGCTCCACACTCCAGTCCCGAGCCCAGTGACTCGGACAGCACCTCATCCTCTGGCACAGAGGACTCAGCGTCAGAGCAAGAGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS CCA 90 bp | ACGCTGAGTCCTCTGTGCCAGAGGATGAGGTGCTGTCCGAGTCACTaGGCTCGGGACTGGAGTGTGGAGCCTGATGCGAGGGATTGCACT | + |
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Preference number: 5 (lower is better) Translates to: TLSPLCQRMRCCPSH*ARDWSVEPDARDCT Trigger: AGTGCAATCCCTCGCATCAGGCTCCACACTCCAGTCCCGAGCCCAGTGACTCGGACAGCACCTCATCCTCTGGCACAGAGGACTCAGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS CCA 90 bp | ACGAGGAGTGCGGCGGCTTCCAGTTCTGGCAACTCTAACCCCAGCTaGGCCTTACTGAGCGAGACTGCTTTCAAGGCTTCGGTTAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TRSAAASSSGNSNPS*ALLSETAFKASVRA Trigger: TGCCCTAACCGAAGCCTTGAAAGCAGTCTCGCTCAGTAAGGCCCAGCTGGGGTTAGAGTTGCCAGAACTGGAAGCCGCCGCACTCCTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS-3UTR CAA 90 bp | GGAGACAGGCCAAGGGCATTCCCTCCAGGGCTTTCTGACCAAGGCAGCTGCTGGTTCCAAAAGTGGGGCTaGCAGAGAAGTGAGCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: GDRPRAFPPGLSDQGSCWFQKWG*QRSEQG Trigger: TCCCTGCTCACTTCTCTGCAAGCCCCACTTTTGGAA...CCAGCAGCTGCCTTGGTCAGAAAGCCCTGGAGGGAATGCCCTTGGCCTGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| CDS TCA 90 bp | CGGCGGCTTCCAGTTCTGGCAACTCTAACCCCAGCTGGGCCTTACTaGGCGAGACTGCTTTCAAGGCTTCGGTTAGGGCAGCCAACTTCT | + |
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Preference number: 5 (lower is better) Translates to: RRLPVLATLTPAGPY*ARLLSRLRLGQPTS Trigger: AGAAGTTGGCTGCCCTAACCGAAGCCTTGAAAGCAGTCTCGCTCAGTAAGGCCCAGCTGGGGTTAGAGTTGCCAGAACTGGAAGCCGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS-3UTR CAA 90 bp | TGCAATGGTCACAGAAATTCGGAAGCTCTCCAGGGAACCCCGAGAAAGGCTCCCTGGCCAGGAGTTTCCTaGGGCAATCGAATGGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: CNGHRNSEALQGTPRKAPWPGVS*GNRMVK Trigger: TTTTACCATTCGATTGCCCAAGGAAACTCCTGGCCA...GGGAGCCTTTCTCGGGGTTCCCTGGAGAGCTTCCGAATTTCTGTGACCATTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| CDS-3UTR CAA 90 bp | GCAGTGAGCATTTCACCATTTCCTCACAGTGCACACTTCACATGTGAGTGCTACGGCCAGTGGCTGTCCTaGACTGACTTCACATCCCTG | + |
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Preference number: 5 (lower is better) Translates to: AVSISPFPHSAHFTCECYGQWLS*TDFTSL Trigger: CAGGGATGTGAAGTCAGTCAAGGACAGCCACTGGCC...GTAGCACTCACATGTGAAGTGTGCACTGTGAGGAAATGGTGAAATGCTCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| CDS-3UTR CAA 90 bp | AAATGTGAAAGAGGATGGAAACACCGAGCAGCATTCAGCACTGGAAAGAACGGGTCTTCCACAAGTGGCTaGGCAGACCTGGATTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: KCERGWKHRAAFSTGKNGSSTSG*ADLDFL Trigger: GAGAAAATCCAGGTCTGCCAAGCCACTTGTGGAAGA...CCCGTTCTTTCCAGTGCTGAATGCTGCTCGGTGTTTCCATCCTCTTTCACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| CDS-3UTR CAA 90 bp | AGAGCAAATCGGTTAGCTTACTTGTTCATCTGCTCACCATGTGTCTCTGGAGCATGCAGCAGAGTCCCCTaGCTCTTGGTTCTTTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: RANRLAYLFICSPCVSGACSRVP*LLVLSQ Trigger: TTGGGAAAGAACCAAGAGCAAGGGGACTCTGCTGCA...TGCTCCAGAGACACATGGTGAGCAGATGAACAAGTAAGCTAACCGATTTGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| CDS-3UTR CAA 90 bp | CATACAGGGAATGACAAAATCACTCAATGGTGTACTTCTCCTAACACATTCCCCAGAGTCCCCTTGCTCTaGGTTCTTTCCCAAAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: HTGNDKITQWCTSPNTFPRVPLL*VLSQRG Trigger: GCCTCTTTGGGAAAGAACCAAGAGCAAGGGGACTCT...GGGGAATGTGTTAGGAGAAGTACACCATTGAGTGATTTTGTCATTCCCTGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113312.9 |
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| CDS TCA 72 bp | CCCGAAGCATCTTCAGCGCATCTCCCAGCTCCTCTATaGGAGGAGCCCGGGCGGAGGCCAGTGGCTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PEASSAHLPAPL*EEPGRRPVAVL Trigger: AAGGACAGCCACTGGCCTCCGCCCGGGCTCCTCTCATAGAGGAGCTGGGAGATGCGCTGAAGATGCTTCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS CCA 72 bp | CCTCTGTGCCAGAGGATGAGGTGCTGTCCGAGTCACTaGGCTCGGGACTGGAGTGTGGAGCCTGATGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: PLCQRMRCCPSH*ARDWSVEPDAR Trigger: CCTCGCATCAGGCTCCACACTCCAGTCCCGAGCCCAGTGACTCGGACAGCACCTCATCCTCTGGCACAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS CCA 72 bp | CAGCTCCTCTATGAGAGGAGCCCGGGCGGAGGCCAGTaGCTGTCCTTGACTGACTTCACATCCCTGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: QLLYERSPGGGQ*LSLTDFTSLAG Trigger: GCCAGCCAGGGATGTGAAGTCAGTCAAGGACAGCCACTGGCCTCCGCCCGGGCTCCTCTCATAGAGGAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS CAA 90 bp | CAGCTCCTCTATGAGAGGAGCCCGGGCGGAGGCCAGTGGCTGTCCTaGACTGACTTCACATCCCTGGCTGGCCATGTTTCTGCAGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: QLLYERSPGGGQWLS*TDFTSLAGHVSAEP Trigger: GGGCTCTGCAGAAACATGGCCAGCCAGGGATGTGAAGTCAGTCAAGGACAGCCACTGGCCTCCGCCCGGGCTCCTCTCATAGAGGAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS TCA 72 bp | GAGGAGCCCGGGCGGAGGCCAGTGGCTGTCCTTGACTaGCTTCACATCCCTGGCTGGCCATGTTTCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: EEPGRRPVAVLD*LHIPGWPCFCR Trigger: TCTGCAGAAACATGGCCAGCCAGGGATGTGAAGTCAGTCAAGGACAGCCACTGGCCTCCGCCCGGGCTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS GCA 72 bp | GCTCGGGACTGGAGTGTGGAGCCTGATGCGAGGGATTaGACTGGGCTGCTCTTCCAGCACCTTCCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ARDWSVEPDARD*TGLLFQHLPPP Trigger: AGGAGGAGGAAGGTGCTGGAAGAGCAGCCCAGTGCAATCCCTCGCATCAGGCTCCACACTCCAGTCCCGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS GCA 72 bp | GCTCTGACGCTGAGTCCTCTGTGCCAGAGGATGAGGTaGTGTCCGAGTCACTGGGCTCGGGACTGGAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: ALTLSPLCQRMR*CPSHWARDWSV Trigger: CACACTCCAGTCCCGAGCCCAGTGACTCGGACAGCACCTCATCCTCTGGCACAGAGGACTCAGCGTCAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS CCA 72 bp | TTGCACTGGGCTGCTCTTCCAGCACCTTCCTCCTCCTaGACGAGGAGTGCGGCGGCTTCCAGTTCTGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: LHWAALPAPSSS*TRSAAASSSGN Trigger: GTTGCCAGAACTGGAAGCCGCCGCACTCCTCGTCCAGGAGGAGGAAGGTGCTGGAAGAGCAGCCCAGTGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS TCA 72 bp | CACTGTCCTCTTCCAAAAGTGGGGCTTGCAGAGAAGTaGGCAGGGAGGGCTGGGTCCCAGCAGGCTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: HCPLPKVGLAEK*AGRAGSQQAPL Trigger: AAGAGGAGCCTGCTGGGACCCAGCCCTCCCTGCTCACTTCTCTGCAAGCCCCACTTTTGGAAGAGGACAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS CCA 72 bp | GCGGCGGCTTCCAGTTCTGGCAACTCTAACCCCAGCTaGGCCTTACTGAGCGAGACTGCTTTCAAGGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: AAASSSGNSNPS*ALLSETAFKAS Trigger: CGAAGCCTTGAAAGCAGTCTCGCTCAGTAAGGCCCAGCTGGGGTTAGAGTTGCCAGAACTGGAAGCCGCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS TCA 72 bp | CCAGTTCTGGCAACTCTAACCCCAGCTGGGCCTTACTaGGCGAGACTGCTTTCAAGGCTTCGGTTAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PVLATLTPAGPY*ARLLSRLRLGQ Trigger: CTGCCCTAACCGAAGCCTTGAAAGCAGTCTCGCTCAGTAAGGCCCAGCTGGGGTTAGAGTTGCCAGAACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS CCA 72 bp | CTGCTTTCAAGGCTTCGGTTAGGGCAGCCAACTTCTTaGACTTGGCCTTCTGAATCCATACACAGTAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLSRLRLGQPTS*TWPSESIHSSL Trigger: CAGACTACTGTGTATGGATTCAGAAGGCCAAGTCCAAGAAGTTGGCTGCCCTAACCGAAGCCTTGAAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089245.7 ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS TCA 72 bp | CACAAAACTCTCCTTCCAAAGGACACCAGGATTTCATaGACGTCTGTCCAGGTCTCAAACCAGCAGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: HKTLLPKDTRIS*TSVQVSNQQSV Trigger: AACACTCTGCTGGTTTGAGACCTGGACAGACGTTCATGAAATCCTGGTGTCCTTTGGAAGGAGAGTTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113312.9 ENSMUST00000170667.8 |
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| CDS GCA 72 bp | AAAACTGCACTCTTACCTAATGCAGCAGAGTCCCCTTaGTCTTGGTTCTTTCCCAAAGAGGCCACCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: KTALLPNAAESP*SWFFPKEATIS Trigger: AGAAATGGTGGCCTCTTTGGGAAAGAACCAAGAGCAAGGGGACTCTGCTGCATTAGGTAAGAGTGCAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089245.7 |
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