Pregenerated sensors for SHPK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005951Ensembl transcript IDs: ENSMUST00000006105.7, ENSMUST00000131927.9
Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAAGGGAAGAAGGCAACTGGGGCTGCAGGATCCGGAGTCTGCAGTaGCTGGAATCCCACAGGCATGGAGGCTGCCAGCTGGACCGAGGT | + |
|
Preference number: 1 (lower is better) Translates to: VREEGNWGCRIRSLQ*LESHRHGGCQLDRG Trigger: ACCTCGGTCCAGCTGGCAGCCTCCATGCCTGTGGGATTCCAGCCACTGCAGACTCCGGATCCTGCAGCCCCAGTTGCCTTCTTCCCTTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | GCTGTTGGAAAGGAAGCATGGAGTGCAGGTTCTGAACGATGCCTCTaGAGAGGGCCCGGGTCACATGGCCCAGGGAGAGGTCAGAGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: AVGKEAWSAGSERCL*RGPGSHGPGRGQRR Trigger: CCTCCTCTGACCTCTCCCTGGGCCATGTGACCCGGGCCCTCTGCAGAGGCATCGTTCAGAACCTGCACTCCATGCTTCCTTTCCAACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR TCA 90 bp | CCCCACTCTTTGAGCTGTTGGAAAGGAAGCATGGAGTGCAGGTTCTaGACGATGCCTCTGCAGAGGGCCCGGGTCACATGGCCCAGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: PHSLSCWKGSMECRF*TMPLQRARVTWPRE Trigger: CTCCCTGGGCCATGTGACCCGGGCCCTCTGCAGAGGCATCGTTCAGAACCTGCACTCCATGCTTCCTTTCCAACAGCTCAAAGAGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | GGAGTCTGCAGTGGCTGGAATCCCACAGGCATGGAGGCTGCCAGCTaGACCGAGGTGCTGATGTTGAGAACTGCATCAGTCCTTTGGCCC | + |
|
Preference number: 1 (lower is better) Translates to: GVCSGWNPTGMEAAS*TEVLMLRTASVLWP Trigger: GGGCCAAAGGACTGATGCAGTTCTCAACATCAGCACCTCGGTCCAGCTGGCAGCCTCCATGCCTGTGGGATTCCAGCCACTGCAGACTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR TCA 90 bp | ACAGTGCACTCCCACTCCCCACCACCCGGGCCACACCCCACTCTTTaGGCTGTTGGAAAGGAAGCATGGAGTGCAGGTTCTGAACGATGC | + |
|
Preference number: 1 (lower is better) Translates to: TVHSHSPPPGPHPTL*AVGKEAWSAGSERC Trigger: GCATCGTTCAGAACCTGCACTCCATGCTTCCTTTCCAACAGCTCAAAGAGTGGGGTGTGGCCCGGGTGGTGGGGAGTGGGAGTGCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | AGGATCCGGAGTCTGCAGTGGCTGGAATCCCACAGGCATGGAGGCTaGCAGCTGGACCGAGGTGCTGATGTTGAGAACTGCATCAGTCCT | + |
|
Preference number: 1 (lower is better) Translates to: RIRSLQWLESHRHGG*QLDRGADVENCISP Trigger: AGGACTGATGCAGTTCTCAACATCAGCACCTCGGTCCAGCTGGCAGCCTCCATGCCTGTGGGATTCCAGCCACTGCAGACTCCGGATCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | TCAGAGGAGGAGATTCTAGTCACAGAGGCCAGCTGGTCTGGCAGGTaGCTCTCCCCCAGCACTGTTGGGGTGATGGTGAGATGGGTGTCT | + |
|
Preference number: 1 (lower is better) Translates to: SEEEILVTEASWSGR*LSPSTVGVMVRWVS Trigger: AGACACCCATCTCACCATCACCCCAACAGTGCTGGGGGAGAGGCACCTGCCAGACCAGCTGGCCTCTGTGACTAGAATCTCCTCCTCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | AGAAGACTCGGGGTAGCCACGGTGCAGCACTGTCCCAGAAGCACATaGCAAGGCAAGCCCAGAGACCTCAGCTTTCTCCTCCAAGGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: RRLGVATVQHCPRST*QGKPRDLSFLLQGV Trigger: CACACCTTGGAGGAGAAAGCTGAGGTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTACCCCGAGTCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | TCTGGCAGGTGCCTCTCCCCCAGCACTGTTGGGGTGATGGTGAGATaGGTGTCTTTCTGCTGTGCAGCCGCCTGGATCATGCGTGAATAC | + |
|
Preference number: 1 (lower is better) Translates to: SGRCLSPSTVGVMVR*VSFCCAAAWIMREY Trigger: GTATTCACGCATGATCCAGGCGGCTGCACAGCAGAAAGACACCCATCTCACCATCACCCCAACAGTGCTGGGGGAGAGGCACCTGCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | GCATCTACATCCTGCCCAAAGCACACTGGGAAAGGAAACGCCCTCTaGACCTCCTGCTTCAGCACCTCGTTCCTGGACAGTGCACTCCCA | + |
|
Preference number: 1 (lower is better) Translates to: ASTSCPKHTGKGNAL*TSCFSTSFLDSALP Trigger: TGGGAGTGCACTGTCCAGGAACGAGGTGCTGAAGCAGGAGGTCCAGAGGGCGTTTCCTTTCCCAGTGTGCTTTGGGCAGGATGTAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | CAGAGCTGCCCCAAAGGCTGCATCTACATCCTGCCCAAAGCACACTaGGAAAGGAAACGCCCTCTGGACCTCCTGCTTCAGCACCTCGTT | + |
|
Preference number: 1 (lower is better) Translates to: QSCPKGCIYILPKAH*ERKRPLDLLLQHLV Trigger: AACGAGGTGCTGAAGCAGGAGGTCCAGAGGGCGTTTCCTTTCCCAGTGTGCTTTGGGCAGGATGTAGATGCAGCCTTTGGGGCAGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | GCTGCCTGGCTCTGCAATGTCGGGGAGAAGGTGGATAGGAAAGCCTaGCTTTTCCAGTGTGTCCAAGTTCCAGCTCTGGCTCTGGGTGTT | + |
|
Preference number: 1 (lower is better) Translates to: AAWLCNVGEKVDRKA*LFQCVQVPALALGV Trigger: AACACCCAGAGCCAGAGCTGGAACTTGGACACACTGGAAAAGGCAGGCTTTCCTATCCACCTTCTCCCCGACATTGCAGAGCCAGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | CTGGCTAAGGTCTCTCTGGAGCATGACCAGAGCTGCCCCAAAGGCTaGATCTACATCCTGCCCAAAGCACACTGGGAAAGGAAACGCCCT | + |
|
Preference number: 1 (lower is better) Translates to: LAKVSLEHDQSCPKG*IYILPKAHWERKRP Trigger: AGGGCGTTTCCTTTCCCAGTGTGCTTTGGGCAGGATGTAGATGCAGCCTTTGGGGCAGCTCTGGTCATGCTCCAGAGAGACCTTAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | CAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTaGGGCCTGTGGGATAAAGGTTCTCTCATGAAACTGGCCACCCCT | + |
|
Preference number: 1 (lower is better) Translates to: QNHQRAARSSPWRKG*GLWDKGSLMKLATP Trigger: AGGGGTGGCCAGTTTCATGAGAGAACCTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | GTTCTGCCTGCCATGCTGCCTGGCTCTGCAATGTCGGGGAGAAGGTaGATAGGAAAGCCTGCCTTTTCCAGTGTGTCCAAGTTCCAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: VLPAMLPGSAMSGRR*IGKPAFSSVSKFQL Trigger: GAGCTGGAACTTGGACACACTGGAAAAGGCAGGCTTTCCTATCCACCTTCTCCCCGACATTGCAGAGCCAGGCAGCATGGCAGGCAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | CTCTCCCCCAGCACTGTTGGGGTGATGGTGAGATGGGTGTCTTTCTaGTGTGCAGCCGCCTGGATCATGCGTGAATACACAGTGGATTCT | + |
|
Preference number: 1 (lower is better) Translates to: LSPSTVGVMVRWVSF*CAAAWIMREYTVDS Trigger: AGAATCCACTGTGTATTCACGCATGATCCAGGCGGCTGCACAGCAGAAAGACACCCATCTCACCATCACCCCAACAGTGCTGGGGGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | CTAAGGCTCCTTCTGGCTAAGGTCTCTCTGGAGCATGACCAGAGCTaGCCCAAAGGCTGCATCTACATCCTGCCCAAAGCACACTGGGAA | + |
|
Preference number: 1 (lower is better) Translates to: LRLLLAKVSLEHDQS*PKGCIYILPKAHWE Trigger: TTCCCAGTGTGCTTTGGGCAGGATGTAGATGCAGCCTTTGGGGCAGCTCTGGTCATGCTCCAGAGAGACCTTAGCCAGAAGGAGCCTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR TCA 90 bp | ACTGAACAAGCATGTGGACAAACGTGGCCAGCACATTGCCTCCATTaGGTGACGCTGCCACCCCTAGGTAGGTCCTGTCGAAGTAAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: TEQACGQTWPAHCLH*VTLPPLGRSCRSKG Trigger: TCCCTTACTTCGACAGGACCTACCTAGGGGTGGCAGCGTCACTCAATGGAGGCAATGTGCTGGCCACGTTTGTCCACATGCTTGTTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | CTGTGTCCCCTTTGGGATTTCAAACCATGTGTGAGAAGTTCTGCCTaGCATGCTGCCTGGCTCTGCAATGTCGGGGAGAAGGTGGATAGG | + |
|
Preference number: 1 (lower is better) Translates to: LCPLWDFKPCVRSSA*HAAWLCNVGEKVDR Trigger: CCTATCCACCTTCTCCCCGACATTGCAGAGCCAGGCAGCATGGCAGGCAGAACTTCTCACACATGGTTTGAAATCCCAAAGGGGACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | TTCCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTaGAGAAAGGGGTGGGGCCTGTGGGATAAAGGTTCTCTCATGAAA | + |
|
Preference number: 1 (lower is better) Translates to: FLLGQNHQRAARSSP*RKGWGLWDKGSLMK Trigger: TTTCATGAGAGAACCTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | GGCAAGGCAAGCCCAGAGACCTCAGCTTTCTCCTCCAAGGTGTGGTaGTTCATATCCTTTGGTCTCTCTCTGGCTGGAGACCATGCTATA | + |
|
Preference number: 1 (lower is better) Translates to: GKASPETSAFSSKVW*FISFGLSLAGDHAI Trigger: TATAGCATGGTCTCCAGCCAGAGAGAGACCAAAGGATATGAAGCACCACACCTTGGAGGAGAAAGCTGAGGTCTCTGGGCTTGCCTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | TTCAAACCATGTGTGAGAAGTTCTGCCTGCCATGCTGCCTGGCTCTaGAATGTCGGGGAGAAGGTGGATAGGAAAGCCTGCCTTTTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: FKPCVRSSACHAAWL*NVGEKVDRKACLFQ Trigger: CTGGAAAAGGCAGGCTTTCCTATCCACCTTCTCCCCGACATTGCAGAGCCAGGCAGCATGGCAGGCAGAACTTCTCACACATGGTTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | GGCCCATGCAGGAATAGACAGAGGCTTGTAAGTCACCCAGGGCTATaGCCACCTGTGTCCCCTTTGGGATTTCAAACCATGTGTGAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: GPCRNRQRLVSHPGL*PPVSPLGFQTMCEK Trigger: CTTCTCACACATGGTTTGAAATCCCAAAGGGGACACAGGTGGGCATAGCCCTGGGTGACTTACAAGCCTCTGTCTATTCCTGCATGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | TGGGATTTCAAACCATGTGTGAGAAGTTCTGCCTGCCATGCTGCCTaGCTCTGCAATGTCGGGGAGAAGGTGGATAGGAAAGCCTGCCTT | + |
|
Preference number: 1 (lower is better) Translates to: WDFKPCVRSSACHAA*LCNVGEKVDRKACL Trigger: AAGGCAGGCTTTCCTATCCACCTTCTCCCCGACATTGCAGAGCCAGGCAGCATGGCAGGCAGAACTTCTCACACATGGTTTGAAATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | GTTGGGGTGATGGTGAGATGGGTGTCTTTCTGCTGTGCAGCCGCCTaGATCATGCGTGAATACACAGTGGATTCTTCAACCTCCAGACCA | + |
|
Preference number: 1 (lower is better) Translates to: VGVMVRWVSFCCAAA*IMREYTVDSSTSRP Trigger: TGGTCTGGAGGTTGAAGAATCCACTGTGTATTCACGCATGATCCAGGCGGCTGCACAGCAGAAAGACACCCATCTCACCATCACCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR TCA 90 bp | GGTGAGATGGGTGTCTTTCTGCTGTGCAGCCGCCTGGATCATGCGTaGATACACAGTGGATTCTTCAACCTCCAGACCAAGATCTGCCAT | + |
|
Preference number: 1 (lower is better) Translates to: GEMGVFLLCSRLDHA*IHSGFFNLQTKICH Trigger: ATGGCAGATCTTGGTCTGGAGGTTGAAGAATCCACTGTGTATTCACGCATGATCCAGGCGGCTGCACAGCAGAAAGACACCCATCTCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | CGGCATTCTGGTCAGACATCAGGGGTCTTGGCAAGCCACACAGCATaGCAACCACATAATCTTGAATGGTGCCAGCTGCATCATAGGACT | + |
|
Preference number: 1 (lower is better) Translates to: RHSGQTSGVLASHTA*QPHNLEWCQLHHRT Trigger: AGTCCTATGATGCAGCTGGCACCATTCAAGATTATGTGGTTGCCATGCTGTGTGGCTTGCCAAGACCCCTGATGTCTGACCAGAATGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | GGGGTCTTGGCAAGCCACACAGCATGGCAACCACATAATCTTGAATaGTGCCAGCTGCATCATAGGACTTCAGAAACTCCGGGCTGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: GVLASHTAWQPHNLE*CQLHHRTSETPGCF Trigger: AAAACAGCCCGGAGTTTCTGAAGTCCTATGATGCAGCTGGCACCATTCAAGATTATGTGGTTGCCATGCTGTGTGGCTTGCCAAGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | TGTCTTTCTGCTGTGCAGCCGCCTGGATCATGCGTGAATACACAGTaGATTCTTCAACCTCCAGACCAAGATCTGCCATCCACTGAACAA | + |
|
Preference number: 1 (lower is better) Translates to: CLSAVQPPGSCVNTQ*ILQPPDQDLPSTEQ Trigger: TTGTTCAGTGGATGGCAGATCTTGGTCTGGAGGTTGAAGAATCCACTGTGTATTCACGCATGATCCAGGCGGCTGCACAGCAGAAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR TCA 90 bp | CCACCCACAGAGCCGTCCCAGAAAAGGACAACCCAGAGATCATGCTaGCATTGTCAATTAGGTAAGATTCCCAGCATTCCTTTAGCCAAG | + |
|
Preference number: 1 (lower is better) Translates to: PPTEPSQKRTTQRSC*HCQLGKIPSIPLAK Trigger: CTTGGCTAAAGGAATGCTGGGAATCTTACCTAATTGACAATGTCAGCATGATCTCTGGGTTGTCCTTTTCTGGGACGGCTCTGTGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR TCA 90 bp | GATGGTTGCACAGCCGAATCCTGTGGCCACACTGAGATGGGAATCTaGATTATGGCCACCATTAAAAATGGCACAACTTGGTCCCAAAGC | + |
|
Preference number: 1 (lower is better) Translates to: DGCTAESCGHTEMGI*IMATIKNGTTWSQS Trigger: GCTTTGGGACCAAGTTGTGCCATTTTTAATGGTGGCCATAATTCAGATTCCCATCTCAGTGTGGCCACAGGATTCGGCTGTGCAACCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | GTCTTGGCAAGCCACACAGCATGGCAACCACATAATCTTGAATGGTaGCAGCTGCATCATAGGACTTCAGAAACTCCGGGCTGTTTTTCA | + |
|
Preference number: 1 (lower is better) Translates to: VLASHTAWQPHNLEW*QLHHRTSETPGCFS Trigger: TGAAAAACAGCCCGGAGTTTCTGAAGTCCTATGATGCAGCTGGCACCATTCAAGATTATGTGGTTGCCATGCTGTGTGGCTTGCCAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | AGAGACCTCAGCTTTCTCCTCCAAGGTGTGGTGCTTCATATCCTTTaGTCTCTCTCTGGCTGGAGACCATGCTATAGCTGTTCTCTTCAA | + |
|
Preference number: 1 (lower is better) Translates to: RDLSFLLQGVVLHIL*SLSGWRPCYSCSLQ Trigger: TTGAAGAGAACAGCTATAGCATGGTCTCCAGCCAGAGAGAGACCAAAGGATATGAAGCACCACACCTTGGAGGAGAAAGCTGAGGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR GCA 90 bp | CAAGCCACACAGCATGGCAACCACATAATCTTGAATGGTGCCAGCTaGATCATAGGACTTCAGAAACTCCGGGCTGTTTTTCAAAAGCCA | + |
|
Preference number: 1 (lower is better) Translates to: QATQHGNHIILNGAS*IIGLQKLRAVFQKP Trigger: TGGCTTTTGAAAAACAGCCCGGAGTTTCTGAAGTCCTATGATGCAGCTGGCACCATTCAAGATTATGTGGTTGCCATGCTGTGTGGCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | AGCCAGAAGATGGTTGCACAGCCGAATCCTGTGGCCACACTGAGATaGGAATCTGAATTATGGCCACCATTAAAAATGGCACAACTTGGT | + |
|
Preference number: 1 (lower is better) Translates to: SQKMVAQPNPVATLR*ESELWPPLKMAQLG Trigger: ACCAAGTTGTGCCATTTTTAATGGTGGCCATAATTCAGATTCCCATCTCAGTGTGGCCACAGGATTCGGCTGTGCAACCATCTTCTGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 90 bp | CTCCCACATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATTCTTaGAAGGCACTAGTTTGGGGTCTGGTTAGAGATTCCTGGCTGTAT | + |
|
Preference number: 1 (lower is better) Translates to: LPHLHFQSALRRSYS*KALVWGLVRDSWLY Trigger: ATACAGCCAGGAATCTCTAACCAGACCCCAAACTAGTGCCTTCCAAGAATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATGTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR TCA 90 bp | GGTTACCACAATAGTATACCTTATGAAATAACTCTTACAAAGAGATaGCATGGTTTCTCCCCAAAGTCACAGGTGCCCCTGAGCCGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: GYHNSIPYEITLTKR*HGFSPKSQVPLSRG Trigger: CCCACGGCTCAGGGGCACCTGTGACTTTGGGGAGAAACCATGTCATCTCTTTGTAAGAGTTATTTCATAAGGTATACTATTGTGGTAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | ACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGTCTGAACGATGCCTCTaGAGAGGGCCCGGGTCACAT | + |
|
Preference number: 2 (lower is better) Translates to: TTRGQQDLHPGERGGACGSERCL*RGPGSH Trigger: ATGTGACCCGGGCCCTCTGCAGAGGCATCGTTCAGA...CCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTAGCCACGGTGCAGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAAGGGAAGAAGGCAACTaGGGCTGCAGGATCCGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: GVATVQHCPRSTWQGKPRREEGN*GCRIRS Trigger: ACTCCGGATCCTGCAGCCCCAGTTGCCTTCTTCCCT...TCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | CCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGACACAGCCGAGCCCAGTaGCCGGGAAACTGTTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PPEGSKIFTLEKGVGPVGHSRAQ*PGNCLF Trigger: AAACAAACAGTTTCCCGGTCACTGGGCTCGGCTGTG...TCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGAGACATCAGGGGTCTTaGCAAGCCACACAGCATGGC | + |
|
Preference number: 2 (lower is better) Translates to: TTRGQQDLHPGERGGACGRHQGS*QATQHG Trigger: GCCATGCTGTGTGGCTTGCCAAGACCCCTGATGTCT...CCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTAGCCACGGTGCAGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAATCCGGAGTCTGCAGTaGCTGGAATCCCACAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GVATVQHCPRSTWQGKPRIRSLQ*LESHRH Trigger: ATGCCTGTGGGATTCCAGCCACTGCAGACTCCGGAT...TCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGATAAAGGTTCTCTCATGAAAAGTCACAGGTGCCCCTaGGCCGTGGGGTCCTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SSPWRKGWGLWDKGSLMKSHRCP*AVGSFG Trigger: CCCAAAGGACCCCACGGCTCAGGGGCACCTGTGACT...TTTCATGAGAGAACCTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGATAAAGGTGAGAAGTTCTGCCTaGCATGCTGCCTGGCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: RGQQDLHPGERGGACGIKVRSSA*HAAWLC Trigger: GCAGAGCCAGGCAGCATGGCAGGCAGAACTTCTCAC...CTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTAGCCACGGTGCAGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGACCTGCTACAACCTGGTaGGGAGGATTTTTCCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GVATVQHCPRSTWQGKPRPATTW*GGFFQQ Trigger: TTGCTGGAAAAATCCTCCCCACCAGGTTGTAGCAGG...TCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTAGCCACGGTGCAGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGATGGTCTCTCTCTGGCTaGAGACCATGCTATAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GVATVQHCPRSTWQGKPRWSLSG*RPCYSC Trigger: ACAGCTATAGCATGGTCTCCAGCCAGAGAGAGACCA...TCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | CCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGAGTCATAGAAAAGGGCTaGTGCCTTGCTGCCATCTTG | + |
|
Preference number: 2 (lower is better) Translates to: PPEGSKIFTLEKGVGPVGVIEKG*CLAAIL Trigger: CAAGATGGCAGCAAGGCACCAGCCCTTTTCTATGAC...TCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | ATCTGCCATCCACTGAACAAGCATGTGGACAAACGTGGCCAGCACATTGCCTCCGGAATCCCACAGGCATaGAGGCTGCCAGCTGGACCG | + |
|
Preference number: 2 (lower is better) Translates to: ICHPLNKHVDKRGQHIASGIPQA*RLPAGP Trigger: CGGTCCAGCTGGCAGCCTCCATGCCTGTGGGATTCC...GGAGGCAATGTGCTGGCCACGTTTGTCCACATGCTTGTTCAGTGGATGGCAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | CCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGAGCTGTTCTTACCAGGTaGCTTTTCTTCTCCTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: PPEGSKIFTLEKGVGPVGAVLTR*LFFSWM Trigger: CATCCAGGAGAAGAAAAGTCACCTGGTAAGAACAGC...TCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTTCTCCTGGATGTGCCTTTAAGCCAGCTGTGCTGAGAAGACTCGGGGTAGCCGGTGTCTTTCTGCTGTaGAGCCGCCTGGATCATGCG | + |
|
Preference number: 2 (lower is better) Translates to: SSPGCAFKPAVLRRLGVAGVFLL*SRLDHA Trigger: CGCATGATCCAGGCGGCTGCACAGCAGAAAGACACC...GGCTACCCCGAGTCTTCTCAGCACAGCTGGCTTAAAGGCACATCCAGGAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | ACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGTCCATCTCCCACATCTaGATTTTCAGTCAGCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: TTRGQQDLHPGERGGACGSISHI*IFSQLS Trigger: TGAGAGCTGACTGAAAATGCAGATGTGGGAGATGGA...CCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAGCCACGGTGCAGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGACTCCTCCAAGGTGTGGTaGTTCATATCCTTTGGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: VATVQHCPRSTWQGKPRDSSKVW*FISFGL Trigger: GAGACCAAAGGATATGAAGCACCACACCTTGGAGGA...GTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGATAAAGGGGCTGGTGCCTTGCTaGCATCTTGAAAACAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RGQQDLHPGERGGACGIKGLVPC*HLENSL Trigger: CAGACTGTTTTCAAGATGGCAGCAAGGCACCAGCCC...CTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGACCTCAGCTTTCTCCAAGCCAGAAGATGGTTaGACAGCCGAATCCTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: STVPEAHGKASPETSAFSKPEDG*TAESCG Trigger: GCCACAGGATTCGGCTGTGCAACCATCTTCTGGCTT...GGAGAAAGCTGAGGTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTTGATGAACTAAGGAAGGCTCCTTCTCTTCCCCGAGACTGGGAGAGGGGCCCACCTGCTACAACCTaGTGGGGAGGATTTTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: ELDELRKAPSLPRDWERGPPATT*WGGFFQ Trigger: CTGGAAAAATCCTCCCCACCAGGTTGTAGCAGGTGG...GCCCCTCTCCCAGTCTCGGGGAAGAGAAGGAGCCTTCCTTAGTTCATCAAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTCTGGAGCATGACCAGAGCTGCCCCAAAGGCTGCATCTACATCCTGCCCACAGCTAGCGGCATTCTaGTCAGACATCAGGGGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SLWSMTRAAPKAASTSCPQLAAF*SDIRGL Trigger: AAGACCCCTGATGTCTGACCAGAATGCCGCTAGCTG...TGGGCAGGATGTAGATGCAGCCTTTGGGGCAGCTCTGGTCATGCTCCAGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | GGACATTCCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGGGGTGATGGTGAGATaGGTGTCTTTCTGCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GHSYWARTTRGQQDLHPGGVMVR*VSFCCA Trigger: TGCACAGCAGAAAGACACCCATCTCACCATCACCCC...TCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGGAATGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | CCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGATATCAAGCTGACAGGTaGGATAAGATTCCCAGAATC | + |
|
Preference number: 2 (lower is better) Translates to: PPEGSKIFTLEKGVGPVGYQADR*DKIPRI Trigger: GATTCTGGGAATCTTATCTCACCTGTCAGCTTGATA...TCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | GGACATTCCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGCCTTGCTGCCATCTTaGAAACAGTCTGTCAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GHSYWARTTRGQQDLHPGALLPS*KQSVSQ Trigger: CTGACTGACAGACTGTTTTCAAGATGGCAGCAAGGC...TCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGGAATGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGACCTCAGCTTTCTCCCAGTCCTTTGGCCCATaGAGGAATAGACAGAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: STVPEAHGKASPETSAFSQSFGP*RNRQRL Trigger: AAGCCTCTGTCTATTCCTGCATGGGCCAAAGGACTG...GGAGAAAGCTGAGGTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTCTGGAGCATGACCAGAGCTGCCCCAAAGGCTGCATCTACATCCTGCCCACAGCCGCCTGGATCATaGGTGAATACACAGTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: SLWSMTRAAPKAASTSCPQPPGS*VNTQWI Trigger: AATCCACTGTGTATTCACGCATGATCCAGGCGGCTG...TGGGCAGGATGTAGATGCAGCCTTTGGGGCAGCTCTGGTCATGCTCCAGAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTGCTCTGTGGAGCTGGTCTGGCAGGTaGCTCTCCCCCAGCACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: CCHLENSLSVSVPHSALWSWSGR*LSPSTV Trigger: AACAGTGCTGGGGGAGAGGCACCTGCCAGACCAGCT...CCACAGAGCACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCCGGGCCACACCCCACTCTTTGAGCTGTTGGAAAGGAAGCATGGAGTGCAGGTCAAAAGCCAGAAGATaGTTGCACAGCCGAATCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TRATPHSLSCWKGSMECRSKARR*LHSRIL Trigger: CAGGATTCGGCTGTGCAACCATCTTCTGGCTTTTGA...CCTGCACTCCATGCTTCCTTTCCAACAGCTCAAAGAGTGGGGTGTGGCCCGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGTCCATCTCCCACATCTaGATTTTCAGTCAGCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PTGPEPPEGSKIFTLEKGSISHI*IFSQLS Trigger: TGAGAGCTGACTGAAAATGCAGATGTGGGAGATGGA...CCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | ATCTGCCATCCACTGAACAAGCATGTGGACAAACGTGGCCAGCACATTGCCTCCAAGTTCTGCCTGCCATaGTGCCTGGCTCTGCAATGT | + |
|
Preference number: 2 (lower is better) Translates to: ICHPLNKHVDKRGQHIASKFCLP*CLALQC Trigger: ACATTGCAGAGCCAGGCAGCATGGCAGGCAGAACTT...GGAGGCAATGTGCTGGCCACGTTTGTCCACATGCTTGTTCAGTGGATGGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | AAATTACAGTCCACCCACAGAGCCGTCCCAGAAAAGGACAACCCAGAGATCATGAGTCACCCAGGGCTATaGCCACCTGTGTCCCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: KLQSTHRAVPEKDNPEIMSHPGL*PPVSPL Trigger: CAAAGGGGACACAGGTGGGCATAGCCCTGGGTGACT...CATGATCTCTGGGTTGTCCTTTTCTGGGACGGCTCTGTGGGTGGACTGTAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAACTGACAGGGCTATCAAGCTGACAGGTGAGATAAGATTCCCAGAATCGCAACACAGGCATGGAGGCTaGCAGCTGGACCGAGGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: STDRAIKLTGEIRFPESQHRHGG*QLDRGA Trigger: AGCACCTCGGTCCAGCTGGCAGCCTCCATGCCTGTG...TTGCGATTCTGGGAATCTTATCTCACCTGTCAGCTTGATAGCCCTGTCAGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCCGGGCCACACCCCACTCTTTGAGCTGTTGGAAAGGAAGCATGGAGTGCAGGTTCTCCTCCAAGGTGTaGTGCTTCATATCCTTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: TRATPHSLSCWKGSMECRFSSKV*CFISFG Trigger: ACCAAAGGATATGAAGCACCACACCTTGGAGGAGAA...CCTGCACTCCATGCTTCCTTTCCAACAGCTCAAAGAGTGGGGTGTGGCCCGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTCTGGAGCATGACCAGAGCTGCCCCAAAGGCTGCATCTACATCCTGCCCAGTGGCCACACTGAGATaGGAATCTGAATTATGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SLWSMTRAAPKAASTSCPVATLR*ESELWP Trigger: TGGCCATAATTCAGATTCCCATCTCAGTGTGGCCAC...TGGGCAGGATGTAGATGCAGCCTTTGGGGCAGCTCTGGTCATGCTCCAGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTGCTCTGTGGATGGAGGCTGCCAGCTaGACCGAGGTGCTGATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: CCHLENSLSVSVPHSALWMEAAS*TEVLML Trigger: CAACATCAGCACCTCGGTCCAGCTGGCAGCCTCCAT...CCACAGAGCACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTGCTCTGTGGCTCCCCCAGCACTGTTaGGGTGATGGTGAGATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: CCHLENSLSVSVPHSALWLPQHC*GDGEMG Trigger: ACCCATCTCACCATCACCCCAACAGTGCTGGGGGAG...CCACAGAGCACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CAA 90 bp | CATCAGGGGTCTTGGCAAGCCACACAGCATGGCAACCACATAATCTaGAATGGTGCCAGCTGCATCATAGGACTTCAGAAACTCCGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HQGSWQATQHGNHII*NGASCIIGLQKLRA Trigger: AGCCCGGAGTTTCTGAAGTCCTATGATGCAGCTGGCACCATTCAAGATTATGTGGTTGCCATGCTGTGTGGCTTGCCAAGACCCCTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | GGACATTCCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAATTTCAAACCATGTGTaGGAAGTTCTGCCTGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: GHSYWARTTRGQQDLHPGISNHV*EVLPAM Trigger: CATGGCAGGCAGAACTTCTCACACATGGTTTGAAAT...TCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGGAATGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGATAAAGGTTCTCTCATGAAAATGTGTGAGAAGTTCTaGCTGCCATGCTGCCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SSPWRKGWGLWDKGSLMKMCEKF*LPCCLA Trigger: AGCCAGGCAGCATGGCAGGCAGAACTTCTCACACAT...TTTCATGAGAGAACCTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGAGAAGATCCTATTCTTaGAAGGCACTAGTTTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PTGPEPPEGSKIFTLEKGRRSYS*KALVWG Trigger: ACCCCAAACTAGTGCCTTCCAAGAATAGGATCTTCT...CCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGATAAAGGCTTTGCTGGAGCCATaGCTACATAAGTCATCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: RGQQDLHPGERGGACGIKALLEP*LHKSSF Trigger: GAAAGATGACTTATGTAGCCATGGCTCCAGCAAAGC...CTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | AAATTACAGTCCACCCACAGAGCCGTCCCAGAAAAGGACAACCCAGAGATCATGCTGCCCAAAGCACACTaGGAAAGGAAACGCCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KLQSTHRAVPEKDNPEIMLPKAH*ERKRPL Trigger: CAGAGGGCGTTTCCTTTCCCAGTGTGCTTTGGGCAG...CATGATCTCTGGGTTGTCCTTTTCTGGGACGGCTCTGTGGGTGGACTGTAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGCTTGATGAACTAAGGAAGGCTCCTTCTCTTCCCCGAGACTGGGAGAGGGGCACCCAGAGATCATGCTaGCATTGTCAATTAGGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: ELDELRKAPSLPRDWERGTQRSC*HCQLGK Trigger: CTTACCTAATTGACAATGTCAGCATGATCTCTGGGT...GCCCCTCTCCCAGTCTCGGGGAAGAGAAGGAGCCTTCCTTAGTTCATCAAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGATAAAGGTTCTCTCATGAAATCCTTTGGGAGCCTATaGGTAGACAGTGATGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SSPWRKGWGLWDKGSLMKSFGSL*VDSDGD Trigger: GTCACCATCACTGTCTACTCATAGGCTCCCAAAGGA...TTTCATGAGAGAACCTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | GTAGCCACGGTGCAGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGACCTGGTTAGAGATTCCTaGCTGTATGATTATCATATG | + |
|
Preference number: 2 (lower is better) Translates to: VATVQHCPRSTWQGKPRDLVRDS*LYDYHM Trigger: CATATGATAATCATACAGCCAGGAATCTCTAACCAG...GTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCTCCTGGATGTGCCTTTAAGCCAGCTGTGCTGAGAAGACTCGGGGTAGCCTTCTCCTCCAAGGTGTaGTGCTTCATATCCTTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: SSPGCAFKPAVLRRLGVAFSSKV*CFISFG Trigger: ACCAAAGGATATGAAGCACCACACCTTGGAGGAGAA...GGCTACCCCGAGTCTTCTCAGCACAGCTGGCTTAAAGGCACATCCAGGAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTGCTCTGTGGGCATGTGGACAAACGTaGCCAGCACATTGCCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: CCHLENSLSVSVPHSALWACGQT*PAHCLH Trigger: ATGGAGGCAATGTGCTGGCCACGTTTGTCCACATGC...CCACAGAGCACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | TGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTGCTCTGTGGTCCCGCCTGGATCATGCGTaGATACACAGTGGATTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: CHLENSLSVSVPHSALWSRLDHA*IHSGFF Trigger: GAAGAATCCACTGTGTATTCACGCATGATCCAGGCG...GGACCACAGAGCACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTCTGTCAGTCAGTGTTCCTCACAGTGCTCTGTGGTCCCTTTAGCTGTTCTTGGTCTCTCTCTGGCTaGAGACCATGCTATAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TVCQSVFLTVLCGPFSCSWSLSG*RPCYSC Trigger: ACAGCTATAGCATGGTCTCCAGCCAGAGAGAGACCA...AGAACAGCTAAAGGGACCACAGAGCACTGTGAGGAACACTGACTGACAGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTAGAGATTCCTGGCTGTATGATTATCATATGCCCTGAAGGTAAGATCTTCGTCACAGAGGCCAGCTaGTCTGGCAGGTGCCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: WLEIPGCMIIICPEGKIFVTEAS*SGRCLS Trigger: GGAGAGGCACCTGCCAGACCAGCTGGCCTCTGTGAC...GAAGATCTTACCTTCAGGGCATATGATAATCATACAGCCAGGAATCTCTAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAGACTGGTGATTCTCTGACCCTCCATGCATGCCTATCTGAACAGGACATTGCTGTTCTTACCAGGTaGCTTTTCTTCTCCTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: GKTGDSLTLHACLSEQDIAVLTR*LFFSWM Trigger: CATCCAGGAGAAGAAAAGTCACCTGGTAAGAACAGC...AATGTCCTGTTCAGATAGGCATGCATGGAGGGTCAGAGAATCACCAGTCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGTGTATGATTATCATATaGCCTGAAGGTAAGATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PTGPEPPEGSKIFTLEKGCMIII*PEGKIF Trigger: GAAGATCTTACCTTCAGGGCATATGATAATCATACA...CCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTGCTCTGTGGAGGTCTTCTCTGCTTTaGTGGAGCCATGGCTACATA | + |
|
Preference number: 2 (lower is better) Translates to: CCHLENSLSVSVPHSALWRSSLL*WSHGYI Trigger: TATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCT...CCACAGAGCACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | AAATTTATTCAGTTAGCTGAGCCAGCAGTGGGAGGTAAATCCATCAAAGGGGTTTCAGCACCTCGTTCCTaGACAGTGCACTCCCACTCC | + |
|
Preference number: 2 (lower is better) Translates to: KFIQLAEPAVGGKSIKGVSAPRS*TVHSHS Trigger: GGAGTGGGAGTGCACTGTCCAGGAACGAGGTGCTGA...AACCCCTTTGATGGATTTACCTCCCACTGCTGGCTCAGCTAACTGAATAAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGATAAAGTGTATGATTATCATATaGCCTGAAGGTAAGATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: RGQQDLHPGERGGACGIKCMIII*PEGKIF Trigger: GAAGATCTTACCTTCAGGGCATATGATAATCATACA...CTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | CATTCTCTCCATCTCCCACATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATAGCTGCCCCAAAGGCTaGATCTACATCCTGCCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: HSLHLPHLHFQSALRRSYSCPKG*IYILPK Trigger: TTTGGGCAGGATGTAGATGCAGCCTTTGGGGCAGCT...ATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATGTGGGAGATGGAGAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTGCTCTGTGGACCCAGAGATCATGCTaGCATTGTCAATTAGGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: CCHLENSLSVSVPHSALWTQRSC*HCQLGK Trigger: CTTACCTAATTGACAATGTCAGCATGATCTCTGGGT...CCACAGAGCACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTGCCTTGCTGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTAGATTCCTGGCTGTATaGTTATCATATGCCCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LVPCCHLENSLSVSVPHSRFLAV*LSYALK Trigger: CTTCAGGGCATATGATAATCATACAGCCAGGAATCT...ACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCAAGGCACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | CATTCTCTCCATCTCCCACATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATAGACTGGTGATTCTCTaGCCCTCCATGCATGCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: HSLHLPHLHFQSALRRSYRLVIL*PSMHAY Trigger: ATAGGCATGCATGGAGGGTCAGAGAATCACCAGTCT...ATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATGTGGGAGATGGAGAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | CCCTTTAGCTGTTCTTACCAGGTGACTTTTCTTCTCCTGGATGTGCCTTTAAGCAGATCTGCCATCCACTaGACAAGCATGTGGACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PFSCSYQVTFLLLDVPLSRSAIH*TSMWTN Trigger: GTTTGTCCACATGCTTGTTCAGTGGATGGCAGATCT...GCTTAAAGGCACATCCAGGAGAAGAAAAGTCACCTGGTAAGAACAGCTAAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | AAATTTATTCAGTTAGCTGAGCCAGCAGTGGGAGGTAAATCCATCAAAGGGGTTCCACACCCCACTCTTTaGGCTGTTGGAAAGGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KFIQLAEPAVGGKSIKGVPHPTL*AVGKEA Trigger: TGCTTCCTTTCCAACAGCTCAAAGAGTGGGGTGTGG...AACCCCTTTGATGGATTTACCTCCCACTGCTGGCTCAGCTAACTGAATAAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | CCCTTTAGCTGTTCTTACCAGGTGACTTTTCTTCTCCTGGATGTGCCTTTAAGCTCCTCCAAGGTGTGGTaGTTCATATCCTTTGGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: PFSCSYQVTFLLLDVPLSSSKVW*FISFGL Trigger: GAGACCAAAGGATATGAAGCACCACACCTTGGAGGA...GCTTAAAGGCACATCCAGGAGAAGAAAAGTCACCTGGTAAGAACAGCTAAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTAGAGATTCCTGGCTGTATGATTATCATATGCCCTGAAGGTAAGATCTTCAAAGGAAACGCCCTCTaGACCTCCTGCTTCAGCACC | + |
|
Preference number: 2 (lower is better) Translates to: WLEIPGCMIIICPEGKIFKGNAL*TSCFST Trigger: GGTGCTGAAGCAGGAGGTCCAGAGGGCGTTTCCTTT...GAAGATCTTACCTTCAGGGCATATGATAATCATACAGCCAGGAATCTCTAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | CATTCTCTCCATCTCCCACATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATAAAGGGCTGGTGCCTTaGTGCCATCTTGAAAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: HSLHLPHLHFQSALRRSYKGLVP*CHLENS Trigger: ACTGTTTTCAAGATGGCAGCAAGGCACCAGCCCTTT...ATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATGTGGGAGATGGAGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTAGAGATTCCTGGCTGTATGATTATCATATGCCCTGAAGGTAAGATCTTCCCACCTGCTACAACCTaGTGGGGAGGATTTTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: WLEIPGCMIIICPEGKIFPPATT*WGGFFQ Trigger: CTGGAAAAATCCTCCCCACCAGGTTGTAGCAGGTGG...GAAGATCTTACCTTCAGGGCATATGATAATCATACAGCCAGGAATCTCTAACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TCAACTGACAGGGCTATCAAGCTGACAGGTGAGATAAGATTCCCAGAATCGCAACCACATAATCTTGAATaGTGCCAGCTGCATCATAGG | + |
|
Preference number: 2 (lower is better) Translates to: STDRAIKLTGEIRFPESQPHNLE*CQLHHR Trigger: CCTATGATGCAGCTGGCACCATTCAAGATTATGTGG...TTGCGATTCTGGGAATCTTATCTCACCTGTCAGCTTGATAGCCCTGTCAGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTTAGCTGTTCTTACCAGGTGACTTTTCTTCTCCTGGATGTGCCTTTAAGCGCAAGCCACACAGCATaGCAACCACATAATCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PFSCSYQVTFLLLDVPLSASHTA*QPHNLE Trigger: TTCAAGATTATGTGGTTGCCATGCTGTGTGGCTTGC...GCTTAAAGGCACATCCAGGAGAAGAAAAGTCACCTGGTAAGAACAGCTAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTAGAGATTCCTGGCTGTATGATTATCATATGCCCTGAAGGTAAGATCTTCTGCTGTGCAGCCGCCTaGATCATGCGTGAATACACA | + |
|
Preference number: 2 (lower is better) Translates to: WLEIPGCMIIICPEGKIFCCAAA*IMREYT Trigger: TGTGTATTCACGCATGATCCAGGCGGCTGCACAGCA...GAAGATCTTACCTTCAGGGCATATGATAATCATACAGCCAGGAATCTCTAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | CCCTTTAGCTGTTCTTACCAGGTGACTTTTCTTCTCCTGGATGTGCCTTTAAGCTATCAAGCTGACAGGTaGGATAAGATTCCCAGAATC | + |
|
Preference number: 2 (lower is better) Translates to: PFSCSYQVTFLLLDVPLSYQADR*DKIPRI Trigger: GATTCTGGGAATCTTATCTCACCTGTCAGCTTGATA...GCTTAAAGGCACATCCAGGAGAAGAAAAGTCACCTGGTAAGAACAGCTAAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTGCTCTGTGGCTGGTTAGAGATTCCTaGCTGTATGATTATCATATG | + |
|
Preference number: 2 (lower is better) Translates to: CCHLENSLSVSVPHSALWLVRDS*LYDYHM Trigger: CATATGATAATCATACAGCCAGGAATCTCTAACCAG...CCACAGAGCACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTAGAGATTCCTGGCTGTATGATTATCATATGCCCTGAAGGTAAGATCTTCCCTGCTACAACCTGGTaGGGAGGATTTTTCCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: WLEIPGCMIIICPEGKIFPATTW*GGFFQQ Trigger: TTGCTGGAAAAATCCTCCCCACCAGGTTGTAGCAGG...GAAGATCTTACCTTCAGGGCATATGATAATCATACAGCCAGGAATCTCTAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR GCA 90 bp | CATTCTCTCCATCTCCCACATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATCATAATCTTGAATGGTaGCAGCTGCATCATAGGACT | + |
|
Preference number: 2 (lower is better) Translates to: HSLHLPHLHFQSALRRSYHNLEW*QLHHRT Trigger: AGTCCTATGATGCAGCTGGCACCATTCAAGATTATG...ATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATGTGGGAGATGGAGAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTCTCCATCTCCCACATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATAGAAGATCCTATTCTTaGAAGGCACTAGTTTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: HSLHLPHLHFQSALRRSYRRSYS*KALVWG Trigger: ACCCCAAACTAGTGCCTTCCAAGAATAGGATCTTCT...ATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATGTGGGAGATGGAGAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR TCA 90 bp | CATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATTCTTGGAAGGCACTAGTTAGATTCCTGGCTGTATaGTTATCATATGCCCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: HLHFQSALRRSYSWKALVRFLAV*LSYALK Trigger: CTTCAGGGCATATGATAATCATACAGCCAGGAATCT...AACTAGTGCCTTCCAAGAATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | AAGGAAGCATGGAGTGCAGGTTCTGAACGATGCCTCTaGAGAGGGCCCGGGTCACATGGCCCAGGGAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KEAWSAGSERCL*RGPGSHGPGRG Trigger: ACCTCTCCCTGGGCCATGTGACCCGGGCCCTCTGCAGAGGCATCGTTCAGAACCTGCACTCCATGCTTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | GTTGGAAAGGAAGCATGGAGTGCAGGTTCTGAACGATaGCTCTGCAGAGGGCCCGGGTCACATGGCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VGKEAWSAGSER*LCRGPGSHGPG Trigger: CCCTGGGCCATGTGACCCGGGCCCTCTGCAGAGGCATCGTTCAGAACCTGCACTCCATGCTTCCTTTCCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | GGGGTAGCCACGGTGCAGCACTGTCCCAGAAGCACATaGCAAGGCAAGCCCAGAGACCTCAGCTTTCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GVATVQHCPRST*QGKPRDLSFLL Trigger: GAGGAGAAAGCTGAGGTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGGCCACACCCCACTCTTaGAGCTGTTGGAAAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TTRGQQDLHPGERGGACGATPHS*SCWKGS Trigger: GCTTCCTTTCCAACAGCTCAAAGAGTGGGGTGTGGC...CCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | GGTCCTGTCGAAGTAAGGGAAGAAGGCAACTGGGGCTaGAGGATCCGGAGTCTGCAGTGGCTGGAATCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GPVEVREEGNWG*RIRSLQWLESH Trigger: GTGGGATTCCAGCCACTGCAGACTCCGGATCCTGCAGCCCCAGTTGCCTTCTTCCCTTACTTCGACAGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | GAGATTCTAGTCACAGAGGCCAGCTGGTCTGGCAGGTaGCTCTCCCCCAGCACTGTTGGGGTGATGGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: EILVTEASWSGR*LSPSTVGVMVR Trigger: TCTCACCATCACCCCAACAGTGCTGGGGGAGAGGCACCTGCCAGACCAGCTGGCCTCTGTGACTAGAATCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | GATGAACTAAGGAAGGCTCCTTCTCTTCCCCGAGACTaGGAGAGGGGCCTCCCTCCACCTGCTACAACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: DELRKAPSLPRD*ERGLPPPATTW Trigger: CCAGGTTGTAGCAGGTGGAGGGAGGCCCCTCTCCCAGTCTCGGGGAAGAGAAGGAGCCTTCCTTAGTTCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | TGCCTCTCCCCCAGCACTGTTGGGGTGATGGTGAGATaGGTGTCTTTCTGCTGTGCAGCCGCCTGGATCATG | + |
|
Preference number: 3 (lower is better) Translates to: CLSPSTVGVMVR*VSFCCAAAWIM Trigger: CATGATCCAGGCGGCTGCACAGCAGAAAGACACCCATCTCACCATCACCCCAACAGTGCTGGGGGAGAGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTAGCCACGGTGCAGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAACCGAGGTGCTGATGTaGAGAACTGCATCAGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GVATVQHCPRSTWQGKPRTEVLM*RTASVL Trigger: AAGGACTGATGCAGTTCTCAACATCAGCACCTCGGT...TCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR TCA 72 bp | GCATGTGGACAAACGTGGCCAGCACATTGCCTCCATTaGGTGACGCTGCCACCCCTAGGTAGGTCCTGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: ACGQTWPAHCLH*VTLPPLGRSCR Trigger: TCGACAGGACCTACCTAGGGGTGGCAGCGTCACTCAATGGAGGCAATGTGCTGGCCACGTTTGTCCACATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | GGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTaGAGAAAGGGGTGGGGCCTGTGGGATAAAGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GQNHQRAARSSP*RKGWGLWDKGS Trigger: AGAACCTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | TCCTGCCCAAAGCACACTGGGAAAGGAAACGCCCTCTaGACCTCCTGCTTCAGCACCTCGTTCCTGGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: SCPKHTGKGNAL*TSCFSTSFLDS Trigger: ACTGTCCAGGAACGAGGTGCTGAAGCAGGAGGTCCAGAGGGCGTTTCCTTTCCCAGTGTGCTTTGGGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGGTGCTTCATATCCTTaGGTCTCTCTCTGGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PTGPEPPEGSKIFTLEKGGASYP*VSLWLE Trigger: CTCCAGCCAGAGAGAGACCAAAGGATATGAAGCACC...CCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAGCCACGGTGCAGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGACAACTGCATCAGTCCTTaGGCCCATGCAGGAATAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VATVQHCPRSTWQGKPRDNCISP*AHAGID Trigger: GTCTATTCCTGCATGGGCCAAAGGACTGATGCAGTT...GTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR TCA 72 bp | TTGAGCTGTTGGAAAGGAAGCATGGAGTGCAGGTTCTaGACGATGCCTCTGCAGAGGGCCCGGGTCACATGG | + |
|
Preference number: 3 (lower is better) Translates to: LSCWKGSMECRF*TMPLQRARVTW Trigger: CCATGTGACCCGGGCCCTCTGCAGAGGCATCGTTCAGAACCTGCACTCCATGCTTCCTTTCCAACAGCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | GTCTCTCTGGAGCATGACCAGAGCTGCCCCAAAGGCTaGATCTACATCCTGCCCAAAGCACACTGGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSLEHDQSCPKG*IYILPKAHWER Trigger: CCTTTCCCAGTGTGCTTTGGGCAGGATGTAGATGCAGCCTTTGGGGCAGCTCTGGTCATGCTCCAGAGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | CCCAAAGGCTGCATCTACATCCTGCCCAAAGCACACTaGGAAAGGAAACGCCCTCTGGACCTCCTGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PKGCIYILPKAH*ERKRPLDLLLQ Trigger: CTGAAGCAGGAGGTCCAGAGGGCGTTTCCTTTCCCAGTGTGCTTTGGGCAGGATGTAGATGCAGCCTTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | CTTCTGGCTAAGGTCTCTCTGGAGCATGACCAGAGCTaGCCCAAAGGCTGCATCTACATCCTGCCCAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLAKVSLEHDQS*PKGCIYILPKA Trigger: TGCTTTGGGCAGGATGTAGATGCAGCCTTTGGGGCAGCTCTGGTCATGCTCCAGAGAGACCTTAGCCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGCAGAAGATCCTATTCTaGGAAGGCACTAGTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PTGPEPPEGSKIFTLEKGQKILF*EGTSLG Trigger: CCCCAAACTAGTGCCTTCCAAGAATAGGATCTTCTG...CCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | AGCACTGTTGGGGTGATGGTGAGATGGGTGTCTTTCTaGTGTGCAGCCGCCTGGATCATGCGTGAATACACA | + |
|
Preference number: 3 (lower is better) Translates to: STVGVMVRWVSF*CAAAWIMREYT Trigger: TGTGTATTCACGCATGATCCAGGCGGCTGCACAGCAGAAAGACACCCATCTCACCATCACCCCAACAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | CCAGCTAGCGGCATTCTGGTCAGACATCAGGGGTCTTaGCAAGCCACACAGCATGGCAACCACATAATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PASGILVRHQGS*QATQHGNHIIL Trigger: CAAGATTATGTGGTTGCCATGCTGTGTGGCTTGCCAAGACCCCTGATGTCTGACCAGAATGCCGCTAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | GCTGTGCAGCCGCCTGGATCATGCGTGAATACACAGTaGATTCTTCAACCTCCAGACCAAGATCTGCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: AVQPPGSCVNTQ*ILQPPDQDLPS Trigger: GGATGGCAGATCTTGGTCTGGAGGTTGAAGAATCCACTGTGTATTCACGCATGATCCAGGCGGCTGCACAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTACATAAAGCCAGAAGATGGTaGCACAGCCGAATCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PSAGHKQVFSALLEPWLHKARRW*HSRILW Trigger: CCACAGGATTCGGCTGTGCAACCATCTTCTGGCTTT...ATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR TCA 72 bp | GGTGTCTTTCTGCTGTGCAGCCGCCTGGATCATGCGTaGATACACAGTGGATTCTTCAACCTCCAGACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GVFLLCSRLDHA*IHSGFFNLQTK Trigger: CTTGGTCTGGAGGTTGAAGAATCCACTGTGTATTCACGCATGATCCAGGCGGCTGCACAGCAGAAAGACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | CTTTGGGATTTCAAACCATGTGTGAGAAGTTCTGCCTaGCATGCTGCCTGGCTCTGCAATGTCGGGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LWDFKPCVRSSA*HAAWLCNVGEK Trigger: CTTCTCCCCGACATTGCAGAGCCAGGCAGCATGGCAGGCAGAACTTCTCACACATGGTTTGAAATCCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | GATGGGTGTCTTTCTGCTGTGCAGCCGCCTGGATCATaGGTGAATACACAGTGGATTCTTCAACCTCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: DGCLSAVQPPGS*VNTQWILQPPD Trigger: GTCTGGAGGTTGAAGAATCCACTGTGTATTCACGCATGATCCAGGCGGCTGCACAGCAGAAAGACACCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | GGTCAGACATCAGGGGTCTTGGCAAGCCACACAGCATaGCAACCACATAATCTTGAATGGTGCCAGCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GQTSGVLASHTA*QPHNLEWCQLH Trigger: ATGCAGCTGGCACCATTCAAGATTATGTGGTTGCCATGCTGTGTGGCTTGCCAAGACCCCTGATGTCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | AAACCATGTGTGAGAAGTTCTGCCTGCCATGCTGCCTaGCTCTGCAATGTCGGGGAGAAGGTGGATAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KPCVRSSACHAA*LCNVGEKVDRK Trigger: TTTCCTATCCACCTTCTCCCCGACATTGCAGAGCCAGGCAGCATGGCAGGCAGAACTTCTCACACATGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CAA 90 bp | ACATTCCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGACAGAAGATCCTATTCTaGGAAGGCACTAGTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TFLLGQNHQRAARSSPWRQKILF*EGTSLG Trigger: CCCCAAACTAGTGCCTTCCAAGAATAGGATCTTCTG...TCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGGAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTGCCTTGCTGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTAACGTGGCCAGCACATaGCCTCCATTGAGTGACGCT | + |
|
Preference number: 3 (lower is better) Translates to: LVPCCHLENSLSVSVPHSNVAST*PPLSDA Trigger: AGCGTCACTCAATGGAGGCAATGTGCTGGCCACGTT...ACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCAAGGCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCAGCTTTCTCCTCCAAGGTGTGGTGCTTCATATCCTTTGGTCTCTCTCTGCAGGTCTTCTCTGCTTaGCTGGAGCCATGGCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: TSAFSSKVWCFISFGLSLQVFSA*LEPWLH Trigger: ATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTG...CAGAGAGAGACCAAAGGATATGAAGCACCACACCTTGGAGGAGAAAGCTGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR-3UTR CAA 90 bp | AAATTACAGTCCACCCACAGAGCCGTCCCAGAAAAGGACAACCCAGAGATCATGCAGGTCTTCTCTGCTTaGCTGGAGCCATGGCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: KLQSTHRAVPEKDNPEIMQVFSA*LEPWLH Trigger: ATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTG...CATGATCTCTGGGTTGTCCTTTTCTGGGACGGCTCTGTGGGTGGACTGTAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | CATGGGAAGACTGGTGATTCTCTGACCCTCCATGCATaGCTATCTGAACAGGACATTCCTACTGGGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HGKTGDSLTLHA*LSEQDIPTGPE Trigger: TTCTGGCCCAGTAGGAATGTCCTGTTCAGATAGGCATGCATGGAGGGTCAGAGAATCACCAGTCTTCCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | AAACTCCGGGCTGTTTTTCAAAAGCCAGAAGATGGTTaGACAGCCGAATCCTGTGGCCACACTGAGATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLRAVFQKPEDG*TAESCGHTEMG Trigger: TCCCATCTCAGTGTGGCCACAGGATTCGGCTGTGCAACCATCTTCTGGCTTTTGAAAAACAGCCCGGAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | AGCCACACAGCATGGCAACCACATAATCTTGAATGGTaGCAGCTGCATCATAGGACTTCAGAAACTCCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SHTAWQPHNLEW*QLHHRTSETPG Trigger: GCCCGGAGTTTCTGAAGTCCTATGATGCAGCTGGCACCATTCAAGATTATGTGGTTGCCATGCTGTGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | AGGAATAGACAGAGGCTTGTAAGTCACCCAGGGCTATaGCCACCTGTGTCCCCTTTGGGATTTCAAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: RNRQRLVSHPGL*PPVSPLGFQTM Trigger: CATGGTTTGAAATCCCAAAGGGGACACAGGTGGGCATAGCCCTGGGTGACTTACAAGCCTCTGTCTATTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | ATGGTGAGATGGGTGTCTTTCTGCTGTGCAGCCGCCTaGATCATGCGTGAATACACAGTGGATTCTTCAACC | + |
|
Preference number: 3 (lower is better) Translates to: MVRWVSFCCAAA*IMREYTVDSST Trigger: GGTTGAAGAATCCACTGTGTATTCACGCATGATCCAGGCGGCTGCACAGCAGAAAGACACCCATCTCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTCTCTCCATCTCCCACATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATCAGACATCAGGGGTCTaGGCAAGCCACACAGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: HSLHLPHLHFQSALRRSYQTSGV*ASHTAW Trigger: CCATGCTGTGTGGCTTGCCAAGACCCCTGATGTCTG...ATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATGTGGGAGATGGAGAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR TCA 72 bp | GATTCTTCAACCTCCAGACCAAGATCTGCCATCCACTaGACAAGCATGTGGACAAACGTGGCCAGCACATTG | + |
|
Preference number: 3 (lower is better) Translates to: DSSTSRPRSAIH*TSMWTNVASTL Trigger: CAATGTGCTGGCCACGTTTGTCCACATGCTTGTTCAGTGGATGGCAGATCTTGGTCTGGAGGTTGAAGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | GCCATACGCAGTCATAGAAAAGGGCTGGTGCCTTGCTaGCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: AIRSHRKGLVPC*HLENSLSVSVP Trigger: AGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCAAGGCACCAGCCCTTTTCTATGACTGCGTATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | GTGGCCATACGCAGTCATAGAAAAGGGCTGGTGCCTTaGTGCCATCTTGAAAACAGTCTGTCAGTCAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VAIRSHRKGLVP*CHLENSLSVSV Trigger: AACACTGACTGACAGACTGTTTTCAAGATGGCAGCAAGGCACCAGCCCTTTTCTATGACTGCGTATGGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | GACATGTGGCCATACGCAGTCATAGAAAAGGGCTGGTaGCTTGCTGCCATCTTGAAAACAGTCTGTCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: DMWPYAVIEKGW*LAAILKTVCQS Trigger: TGACTGACAGACTGTTTTCAAGATGGCAGCAAGGCACCAGCCCTTTTCTATGACTGCGTATGGCCACATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | AGAGACATGTGGCCATACGCAGTCATAGAAAAGGGCTaGTGCCTTGCTGCCATCTTGAAAACAGTCTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RDMWPYAVIEKG*CLAAILKTVCQ Trigger: CTGACAGACTGTTTTCAAGATGGCAGCAAGGCACCAGCCCTTTTCTATGACTGCGTATGGCCACATGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | GCAAGCCACACAGCATGGCAACCACATAATCTTGAATaGTGCCAGCTGCATCATAGGACTTCAGAAACTCCG | + |
|
Preference number: 3 (lower is better) Translates to: ASHTAWQPHNLE*CQLHHRTSETP Trigger: CGGAGTTTCTGAAGTCCTATGATGCAGCTGGCACCATTCAAGATTATGTGGTTGCCATGCTGTGTGGCTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | GGTGTGGTGCTTCATATCCTTTGGTCTCTCTCTGGCTaGAGACCATGCTATAGCTGTTCTCTTCAACTGACA | + |
|
Preference number: 3 (lower is better) Translates to: GVVLHILWSLSG*RPCYSCSLQLT Trigger: TGTCAGTTGAAGAGAACAGCTATAGCATGGTCTCCAGCCAGAGAGAGACCAAAGGATATGAAGCACCACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR TCA 72 bp | ACAGCCGAATCCTGTGGCCACACTGAGATGGGAATCTaGATTATGGCCACCATTAAAAATGGCACAACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TAESCGHTEMGI*IMATIKNGTTW Trigger: CCAAGTTGTGCCATTTTTAATGGTGGCCATAATTCAGATTCCCATCTCAGTGTGGCCACAGGATTCGGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | ATCCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTaGTGGAGCCATGGCTACATAAGTCATCTTTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: IQVLGISRSSLL*WSHGYISHLSF Trigger: AAAAGAAAGATGACTTATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR CCA 72 bp | CTGCATTTTCAGTCAGCTCTCAGAAGATCCTATTCTTaGAAGGCACTAGTTTGGGGTCTGGTTAGAGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: LHFQSALRRSYS*KALVWGLVRDS Trigger: GGAATCTCTAACCAGACCCCAAACTAGTGCCTTCCAAGAATAGGATCTTCTGAGAGCTGACTGAAAATGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR GCA 72 bp | GTCTGGTTAGAGATTCCTGGCTGTATGATTATCATATaGCCTGAAGGTAAGATCTTCATCAGTCTAGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: VWLEIPGCMIII*PEGKIFISLDH Trigger: ATGATCTAGACTGATGAAGATCTTACCTTCAGGGCATATGATAATCATACAGCCAGGAATCTCTAACCAGAC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR GCA 90 bp | CCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGACACAGGCATGGAGGCTaGCAGCTGGACCGAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPEGSKIFTLEKGVGPVGHRHGG*QLDRGA Trigger: AGCACCTCGGTCCAGCTGGCAGCCTCCATGCCTGTG...TCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | ACCCGGGCCACACCCCACTCTTTGAGCTGTTGGAAAGGAAGCATGGAGTGCAGGATTCTAGTCACATCCTaGTCCCGCCCCTGGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TRATPHSLSCWKGSMECRILVTS*SRPWGP Trigger: CGGGCCCCAGGGGCGGGAGCAGGATGTGACTAGAAT...CCTGCACTCCATGCTTCCTTTCCAACAGCTCAAAGAGTGGGGTGTGGCCCGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| CDS-3UTR GCA 90 bp | GTAGCCACGGTGCAGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGACACTCTCTGGAGCTGCTaGCGGGGAAGGGCATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VATVQHCPRSTWQGKPRDTLWSC*RGRASR Trigger: CCTTGATGCCCTTCCCCGGCAGCAGCTCCAGAGAGT...GTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR CCA 90 bp | GAGCTTGATGAACTAAGGAAGGCTCCTTCTCTTCCCCGAGACTGGGAGAGGGGCGGAATCCCACAGGCATaGAGGCTGCCAGCTGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: ELDELRKAPSLPRDWERGGIPQA*RLPAGP Trigger: CGGTCCAGCTGGCAGCCTCCATGCCTGTGGGATTCC...GCCCCTCTCCCAGTCTCGGGGAAGAGAAGGAGCCTTCCTTAGTTCATCAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | AGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGACCTCAGCTTTCTCCGTCACAGAGGCCAGCTaGTCTGGCAGGTGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: STVPEAHGKASPETSAFSVTEAS*SGRCLS Trigger: GGAGAGGCACCTGCCAGACCAGCTGGCCTCTGTGAC...GGAGAAAGCTGAGGTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | GGACATTCCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAACTCTCTGGAGCTGCTaGCGGGGAAGGGCATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHSYWARTTRGQQDLHPGTLWSC*RGRASR Trigger: CCTTGATGCCCTTCCCCGGCAGCAGCTCCAGAGAGT...TCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGGAATGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR GCA 90 bp | CCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGAAAGCCAGAAGATGGTTaGACAGCCGAATCCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPEGSKIFTLEKGVGPVGKPEDG*TAESCG Trigger: GCCACAGGATTCGGCTGTGCAACCATCTTCTGGCTT...TCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | GGACATTCCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAAGCTGGTCTGGCAGGTaGCTCTCCCCCAGCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GHSYWARTTRGQQDLHPGSWSGR*LSPSTV Trigger: AACAGTGCTGGGGGAGAGGCACCTGCCAGACCAGCT...TCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGGAATGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR TCA 90 bp | AGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGACCTCAGCTTTCTCCGCACATTGCCTCCATTaGGTGACGCTGCCACCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: STVPEAHGKASPETSAFSAHCLH*VTLPPL Trigger: TAGGGGTGGCAGCGTCACTCAATGGAGGCAATGTGC...GGAGAAAGCTGAGGTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | ATCCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTACCGGACTCTCTGGAGCTaGTGCCGGGGAAGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: IQVLGISRSSLLCWSHGYRTLWS*CRGRAS Trigger: TGATGCCCTTCCCCGGCAGCAGCTCCAGAGAGTCCG...GTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR GCA 90 bp | ATCCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTACCTCGTTCCTGGACAGTaGACTCCCACTCCCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: IQVLGISRSSLLCWSHGYLVPGQ*TPTPHH Trigger: GTGGTGGGGAGTGGGAGTGCACTGTCCAGGAACGAG...GTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTACATGCCCTCTGGACCTCCTaGTTCAGCACCTCGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSAGHKQVFSALLEPWLHALWTS*FSTSFL Trigger: CAGGAACGAGGTGCTGAAGCAGGAGGTCCAGAGGGC...ATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | AGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGACCTCAGCTTTCTCCGAGCATGACCAGAGCTaGCCCAAAGGCTGCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: STVPEAHGKASPETSAFSEHDQS*PKGCIY Trigger: GTAGATGCAGCCTTTGGGGCAGCTCTGGTCATGCTC...GGAGAAAGCTGAGGTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | ACCTCAGCTTTCTCCTCCAAGGTGTGGTGCTTCATATCCTTTGGTCTCTCTCTGATGCCCCGGACTCTCTaGAGCTGCTGCCGGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSAFSSKVWCFISFGLSLMPRTL*SCCRGR Trigger: CCTTCCCCGGCAGCAGCTCCAGAGAGTCCGGGGCAT...CAGAGAGAGACCAAAGGATATGAAGCACCACACCTTGGAGGAGAAAGCTGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTAGCCACGGTGCAGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGTTGGAAAGGAAGCATaGAGTGCAGGTTCTGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: GVATVQHCPRSTWQGKPRVGKEA*SAGSER Trigger: TCGTTCAGAACCTGCACTCCATGCTTCCTTTCCAAC...TCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | AGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGACCTCAGCTTTCTCCCTGCCCAAAGCACACTaGGAAAGGAAACGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STVPEAHGKASPETSAFSLPKAH*ERKRPL Trigger: CAGAGGGCGTTTCCTTTCCCAGTGTGCTTTGGGCAG...GGAGAAAGCTGAGGTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | ATCCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTACTCTGAACGATGCCTCTaGAGAGGGCCCGGGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: IQVLGISRSSLLCWSHGYSERCL*RGPGSH Trigger: ATGTGACCCGGGCCCTCTGCAGAGGCATCGTTCAGA...GTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGATAAAGGGGGTGATGGTGAGATaGGTGTCTTTCTGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQQDLHPGERGGACGIKGVMVR*VSFCCA Trigger: TGCACAGCAGAAAGACACCCATCTCACCATCACCCC...CTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | ACCAATCCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTCCCCCAGCACTGTTaGGGTGATGGTGAGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TNPSAGHKQVFSALLEPWLPQHC*GDGEMG Trigger: ACCCATCTCACCATCACCCCAACAGTGCTGGGGGAG...CCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGGATTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR TCA 90 bp | GTAGCCACGGTGCAGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGACATTTCAAACCATGTGTaGGAAGTTCTGCCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VATVQHCPRSTWQGKPRDISNHV*EVLPAM Trigger: CATGGCAGGCAGAACTTCTCACACATGGTTTGAAAT...GTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCTGCACCGTGGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCTCTGTGGTCCCTTTAGCTGTTCTTACCAGGTGACTTTTCTTCTCCTGGCAGGTTCTGAACGATaGCTCTGCAGAGGGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVLCGPFSCSYQVTFLLLAGSER*LCRGPG Trigger: CCCGGGCCCTCTGCAGAGGCATCGTTCAGAACCTGC...CAGGAGAAGAAAAGTCACCTGGTAAGAACAGCTAAAGGGACCACAGAGCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | AGCACTGTCCCAGAAGCACATGGCAAGGCAAGCCCAGAGACCTCAGCTTTCTCCGCTGCATCTACATCCTaGCCAAAGCACACTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: STVPEAHGKASPETSAFSAASTS*PKHTGK Trigger: TTTCCCAGTGTGCTTTGGGCAGGATGTAGATGCAGC...GGAGAAAGCTGAGGTCTCTGGGCTTGCCTTGCCATGTGCTTCTGGGACAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | ACATTCCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGACAAAATAGGATGCCATaGATCTGTCCCGACACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TFLLGQNHQRAARSSPWRQNRMP*ICPDTP Trigger: CGGAGTGTCGGGACAGATGCATGGCATCCTATTTTG...TCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGGAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTACATATGTGTGAGAAGTTCTaGCTGCCATGCTGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAGHKQVFSALLEPWLHMCEKF*LPCCLA Trigger: AGCCAGGCAGCATGGCAGGCAGAACTTCTCACACAT...ATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | AAATTACAGTCCACCCACAGAGCCGTCCCAGAAAAGGACAACCCAGAGATCATGGGTGTCTTTCTGCTGTaGAGCCGCCTGGATCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLQSTHRAVPEKDNPEIMGVFLL*SRLDHA Trigger: CGCATGATCCAGGCGGCTGCACAGCAGAAAGACACC...CATGATCTCTGGGTTGTCCTTTTCTGGGACGGCTCTGTGGGTGGACTGTAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | CATTCTCTCCATCTCCCACATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATATGCCCCGGACTCTCTaGAGCTGCTGCCGGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLHLPHLHFQSALRRSYMPRTL*SCCRGR Trigger: CCTTCCCCGGCAGCAGCTCCAGAGAGTCCGGGGCAT...ATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATGTGGGAGATGGAGAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR CCA 90 bp | ACCTCAGCTTTCTCCTCCAAGGTGTGGTGCTTCATATCCTTTGGTCTCTCTCTGAGGGAAGAAGGCAACTaGGGCTGCAGGATCCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSAFSSKVWCFISFGLSLREEGN*GCRIRS Trigger: ACTCCGGATCCTGCAGCCCCAGTTGCCTTCTTCCCT...CAGAGAGAGACCAAAGGATATGAAGCACCACACCTTGGAGGAGAAAGCTGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | TCCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGCACTCTTTGAGCTGTTaGAAAGGAAGCATGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SYWARTTRGQQDLHPGERHSLSC*KGSMEC Trigger: GCACTCCATGCTTCCTTTCCAACAGCTCAAAGAGTG...CCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | CATTCTCTCCATCTCCCACATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATATTCTAGTCACATCCTaGTCCCGCCCCTGGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HSLHLPHLHFQSALRRSYILVTS*SRPWGP Trigger: CGGGCCCCAGGGGCGGGAGCAGGATGTGACTAGAAT...ATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATGTGGGAGATGGAGAGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTACATCAGTCCTTTGGCCCATaGAGGAATAGACAGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSAGHKQVFSALLEPWLHQSFGP*RNRQRL Trigger: AAGCCTCTGTCTATTCCTGCATGGGCCAAAGGACTG...ATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTACATCAGCCGCCTGGATCATaGGTGAATACACAGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PSAGHKQVFSALLEPWLHQPPGS*VNTQWI Trigger: AATCCACTGTGTATTCACGCATGATCCAGGCGGCTG...ATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | GAGCTTGATGAACTAAGGAAGGCTCCTTCTCTTCCCCGAGACTGGGAGAGGGGCCCACATAATCTTGAATaGTGCCAGCTGCATCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELDELRKAPSLPRDWERGPHNLE*CQLHHR Trigger: CCTATGATGCAGCTGGCACCATTCAAGATTATGTGG...GCCCCTCTCCCAGTCTCGGGGAAGAGAAGGAGCCTTCCTTAGTTCATCAAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | AAATTACAGTCCACCCACAGAGCCGTCCCAGAAAAGGACAACCCAGAGATCATGAGACATCAGGGGTCTTaGCAAGCCACACAGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLQSTHRAVPEKDNPEIMRHQGS*QATQHG Trigger: GCCATGCTGTGTGGCTTGCCAAGACCCCTGATGTCT...CATGATCTCTGGGTTGTCCTTTTCTGGGACGGCTCTGTGGGTGGACTGTAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | TCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGATAAAGGTTCTCTCATGAAACAGCTAGCGGCATTCTaGTCAGACATCAGGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSPWRKGWGLWDKGSLMKQLAAF*SDIRGL Trigger: AAGACCCCTGATGTCTGACCAGAATGCCGCTAGCTG...TTTCATGAGAGAACCTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTACATAAGTCATGCTGTGCAGCCGCCTaGATCATGCGTGAATACACA | + |
|
Preference number: 4 (lower is better) Translates to: AGHKQVFSALLEPWLHKSCCAAA*IMREYT Trigger: TGTGTATTCACGCATGATCCAGGCGGCTGCACAGCA...TGACTTATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCTCTGTGGTCCCTTTAGCTGTTCTTACCAGGTGACTTTTCTTCTCCTGTCAGCACCTCGTTCCTaGACAGTGCACTCCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLCGPFSCSYQVTFLLLSAPRS*TVHSHS Trigger: GGAGTGGGAGTGCACTGTCCAGGAACGAGGTGCTGA...CAGGAGAAGAAAAGTCACCTGGTAAGAACAGCTAAAGGGACCACAGAGCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR TCA 90 bp | ACAGTGCTCTGTGGTCCCTTTAGCTGTTCTTACCAGGTGACTTTTCTTCTCCTGATGGAGTGCAGGTTCTaGACGATGCCTCTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVLCGPFSCSYQVTFLLLMECRF*TMPLQR Trigger: CCTCTGCAGAGGCATCGTTCAGAACCTGCACTCCAT...CAGGAGAAGAAAAGTCACCTGGTAAGAACAGCTAAAGGGACCACAGAGCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCCTGGATGTGCCTTTAAGCCAGCTGTGCTGAGAAGACTCGGGGTAGCCCTTTCCAAAATAGGATaGCATGCATCTGTCCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: SSPGCAFKPAVLRRLGVALSKIG*HASVPT Trigger: TGTCGGGACAGATGCATGGCATCCTATTTTGGAAAG...GGCTACCCCGAGTCTTCTCAGCACAGCTGGCTTAAAGGCACATCCAGGAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR GCA 90 bp | CTGGTGCCTTGCTGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTAAGTTCTGCCTGCCATaGTGCCTGGCTCTGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LVPCCHLENSLSVSVPHSKFCLP*CLALQC Trigger: ACATTGCAGAGCCAGGCAGCATGGCAGGCAGAACTT...ACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCAAGGCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | CCCTTTAGCTGTTCTTACCAGGTGACTTTTCTTCTCCTGGATGTGCCTTTAAGCGTGAGAAGTTCTGCCTaGCATGCTGCCTGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFSCSYQVTFLLLDVPLSVRSSA*HAAWLC Trigger: GCAGAGCCAGGCAGCATGGCAGGCAGAACTTCTCAC...GCTTAAAGGCACATCCAGGAGAAGAAAAGTCACCTGGTAAGAACAGCTAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | GCTCTCAGAAGATCCTATTCTTGGAAGGCACTAGTTTGGGGTCTGGTTAGAGATAGTCACCCAGGGCTATaGCCACCTGTGTCCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALRRSYSWKALVWGLVRDSHPGL*PPVSPL Trigger: CAAAGGGGACACAGGTGGGCATAGCCCTGGGTGACT...ATCTCTAACCAGACCCCAAACTAGTGCCTTCCAAGAATAGGATCTTCTGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | ACCAATCCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTCCAGACCAAGATCTaGCATCCACTGAACAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TNPSAGHKQVFSALLEPWLQTKI*HPLNKH Trigger: ATGCTTGTTCAGTGGATGGCAGATCTTGGTCTGGAG...CCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGGATTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | TCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGATAAAGGTTCTCTCATGAAAAGTGGCTCACAGCTCTaGGCTCAAATACAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSPWRKGWGLWDKGSLMKSGSQL*AQIQRQ Trigger: CTGCCTTTGTATTTGAGCCCAGAGCTGTGAGCCACT...TTTCATGAGAGAACCTTTATCCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCTCTGTGGTCCCTTTAGCTGTTCTTACCAGGTGACTTTTCTTCTCCTGTGCCATGTGACCAAGTaGCTCACAGCTCTGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLCGPFSCSYQVTFLLLCHVTK*LTALGS Trigger: TGAGCCCAGAGCTGTGAGCCACTTGGTCACATGGCA...CAGGAGAAGAAAAGTCACCTGGTAAGAACAGCTAAAGGGACCACAGAGCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTTAGCTGTTCTTACCAGGTGACTTTTCTTCTCCTGGATGTGCCTTTAAGCGGAGTCTGCAGTGGCTaGAATCCCACAGGCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFSCSYQVTFLLLDVPLSGVCSG*NPTGME Trigger: CTCCATGCCTGTGGGATTCCAGCCACTGCAGACTCC...GCTTAAAGGCACATCCAGGAGAAGAAAAGTCACCTGGTAAGAACAGCTAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | GGGAAGACTGGTGATTCTCTGACCCTCCATGCATGCCTATCTGAACAGGACATTGCATGTGGACAAACGTaGCCAGCACATTGCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKTGDSLTLHACLSEQDIACGQT*PAHCLH Trigger: ATGGAGGCAATGTGCTGGCCACGTTTGTCCACATGC...AATGTCCTGTTCAGATAGGCATGCATGGAGGGTCAGAGAATCACCAGTCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | AAGTATAAATTACAGTCCACCCACAGAGCCGTCCCAGAAAAGGACAACCCAGAGTGGCTAAGGTCTCTCTaGAGCATGACCAGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KYKLQSTHRAVPEKDNPEWLRSL*SMTRAA Trigger: GGCAGCTCTGGTCATGCTCCAGAGAGACCTTAGCCA...CTCTGGGTTGTCCTTTTCTGGGACGGCTCTGTGGGTGGACTGTAATTTATACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR TCA 90 bp | GCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTACATAAGTCAAGATCTGCCATCCACTaGACAAGCATGTGGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGHKQVFSALLEPWLHKSRSAIH*TSMWTN Trigger: GTTTGTCCACATGCTTGTTCAGTGGATGGCAGATCT...TGACTTATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR TCA 90 bp | AAGTATAAATTACAGTCCACCCACAGAGCCGTCCCAGAAAAGGACAACCCAGAGCCACACCCCACTCTTTaGGCTGTTGGAAAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KYKLQSTHRAVPEKDNPEPHPTL*AVGKEA Trigger: TGCTTCCTTTCCAACAGCTCAAAGAGTGGGGTGTGG...CTCTGGGTTGTCCTTTTCTGGGACGGCTCTGTGGGTGGACTGTAATTTATACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTACATCTTTCCAAAATAGGATaGCATGCATCTGTCCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: PSAGHKQVFSALLEPWLHLSKIG*HASVPT Trigger: TGTCGGGACAGATGCATGGCATCCTATTTTGGAAAG...ATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR CAA 72 bp | GCAGTCATAGAAAAGGGCTGGTGCCTTGCTGCCATCTaGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVIEKGWCLAAI*KTVCQSVFLTV Trigger: CACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCAAGGCACCAGCCCTTTTCTATGACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR TCA 90 bp | CATTCTCTCCATCTCCCACATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATATCCTGTGGCCACACTaGGATGGGAATCTGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLHLPHLHFQSALRRSYILWPH*DGNLAW Trigger: CCAAGCCAGATTCCCATCTCAGTGTGGCCACAGGAT...ATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATGTGGGAGATGGAGAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | CATTCTCTCCATCTCCCACATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATGTGGCCACACTGAGATaGGAATCTGGCTTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSLHLPHLHFQSALRRSYVATLR*ESGLGR Trigger: TCTGCCCAAGCCAGATTCCCATCTCAGTGTGGCCAC...ATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATGTGGGAGATGGAGAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGCACTAGTTTGGGGTCTGGTTAGAGATTCCTGGCTGTATGATTATCATATCCGGAGTCTGCAGTaGCTGGAATCCCACAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WKALVWGLVRDSWLYDYHIRSLQ*LESHRH Trigger: ATGCCTGTGGGATTCCAGCCACTGCAGACTCCGGAT...ATGATAATCATACAGCCAGGAATCTCTAACCAGACCCCAAACTAGTGCCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | GCTCTCAGAAGATCCTATTCTTGGAAGGCACTAGTTTGGGGTCTGGTTAGAGATCAAAATAGGATGCCATaGATCTGTCCCGACACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ALRRSYSWKALVWGLVRDQNRMP*ICPDTP Trigger: CGGAGTGTCGGGACAGATGCATGGCATCCTATTTTG...ATCTCTAACCAGACCCCAAACTAGTGCCTTCCAAGAATAGGATCTTCTGAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGGCACTAGTTTGGGGTCTGGTTAGAGATTCCTGGCTGTATGATTATCATAGCTGCCCCAAAGGCTaGATCTACATCCTGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WKALVWGLVRDSWLYDYHSCPKG*IYILPK Trigger: TTTGGGCAGGATGTAGATGCAGCCTTTGGGGCAGCT...ATGATAATCATACAGCCAGGAATCTCTAACCAGACCCCAAACTAGTGCCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | AAATTACAGTCCACCCACAGAGCCGTCCCAGAAAAGGACAACCCAGAGATCATGGCAAGCCACACAGCATaGCAACCACATAATCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLQSTHRAVPEKDNPEIMASHTA*QPHNLE Trigger: TTCAAGATTATGTGGTTGCCATGCTGTGTGGCTTGC...CATGATCTCTGGGTTGTCCTTTTCTGGGACGGCTCTGTGGGTGGACTGTAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | TGGTTAGAGATTCCTGGCTGTATGATTATCATATGCCCTGAAGGTAAGATCTTCATGGAGGCTGCCAGCTaGACCGAGGTGCTGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLEIPGCMIIICPEGKIFMEAAS*TEVLML Trigger: CAACATCAGCACCTCGGTCCAGCTGGCAGCCTCCAT...GAAGATCTTACCTTCAGGGCATATGATAATCATACAGCCAGGAATCTCTAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | CATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATTCTTGGAAGGCACTAGTTAAAGGAAACGCCCTCTaGACCTCCTGCTTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: HLHFQSALRRSYSWKALVKGNAL*TSCFST Trigger: GGTGCTGAAGCAGGAGGTCCAGAGGGCGTTTCCTTT...AACTAGTGCCTTCCAAGAATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | AAATTTATTCAGTTAGCTGAGCCAGCAGTGGGAGGTAAATCCATCAAAGGGGTTACTGAGATGGGAATCTaGCTTGGGCAGAGAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KFIQLAEPAVGGKSIKGVTEMGI*LGQRSQ Trigger: CTGGCTTCTCTGCCCAAGCCAGATTCCCATCTCAGT...AACCCCTTTGATGGATTTACCTCCCACTGCTGGCTCAGCTAACTGAATAAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | CAACCACATAATCTTGAATGGTGCCAGCTGCATCATAGGACTTCAGAAACTCCGAAGAAGGCAGCAGGCTaGCTCCGTGAAATTTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPHNLEWCQLHHRTSETPKKAAG*LREILS Trigger: GCTTAAAATTTCACGGAGCCAGCCTGCTGCCTTCTT...CGGAGTTTCTGAAGTCCTATGATGCAGCTGGCACCATTCAAGATTATGTGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| CDS-3UTR TCA 90 bp | CATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATTCTTGGAAGGCACTAGTTCGCCTGGATCATGCGTaGATACACAGTGGATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLHFQSALRRSYSWKALVRLDHA*IHSGFF Trigger: GAAGAATCCACTGTGTATTCACGCATGATCCAGGCG...AACTAGTGCCTTCCAAGAATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR GCA 90 bp | AAGTATAAATTACAGTCCACCCACAGAGCCGTCCCAGAAAAGGACAACCCAGAGCATAATCTTGAATGGTaGCAGCTGCATCATAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KYKLQSTHRAVPEKDNPEHNLEW*QLHHRT Trigger: AGTCCTATGATGCAGCTGGCACCATTCAAGATTATG...CTCTGGGTTGTCCTTTTCTGGGACGGCTCTGTGGGTGGACTGTAATTTATACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | GGGAAGACTGGTGATTCTCTGACCCTCCATGCATGCCTATCTGAACAGGACATTCATTCATTTAGGGCTTaGATGATTCTAGTCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: GKTGDSLTLHACLSEQDIHSFRA*MILVTS Trigger: GGATGTGACTAGAATCATCCAAGCCCTAAATGAATG...AATGTCCTGTTCAGATAGGCATGCATGGAGGGTCAGAGAATCACCAGTCTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| 3UTR CAA 72 bp | AATCCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTaGCTGGAGCCATGGCTACATAAGTCATCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NPSAGHKQVFSA*LEPWLHKSSFF Trigger: AAAGAAAGATGACTTATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR CCA 90 bp | AAATTTATTCAGTTAGCTGAGCCAGCAGTGGGAGGTAAATCCATCAAAGGGGTTTCAAAAGCCAGAAGATaGTTGCACAGCCGAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KFIQLAEPAVGGKSIKGVSKARR*LHSRIL Trigger: CAGGATTCGGCTGTGCAACCATCTTCTGGCTTTTGA...AACCCCTTTGATGGATTTACCTCCCACTGCTGGCTCAGCTAACTGAATAAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGCACTAGTTTGGGGTCTGGTTAGAGATTCCTGGCTGTATGATTATCATCATTCATTTAGGGCTTaGATGATTCTAGTCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: WKALVWGLVRDSWLYDYHHSFRA*MILVTS Trigger: GGATGTGACTAGAATCATCCAAGCCCTAAATGAATG...ATGATAATCATACAGCCAGGAATCTCTAACCAGACCCCAAACTAGTGCCTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS CCA 90 bp | CAGCCCGGGCGCAGCTCGCCAGCACCACGAACCCGGATGGGAGGCTaGGTGCAGCCTCCAATAGGGCGGCCTTCACGGACGTGGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QPGRSSPAPRTRMGG*VQPPIGRPSRTWCP Trigger: TGGGCACCACGTCCGTGAAGGCCGCCCTATTGGAGGCTGCACCCAGCCTCCCATCCGGGTTCGTGGTGCTGGCGAGCTGCGCCCGGGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS-3UTR CAA 90 bp | ACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGAAAGGGGTGGGGCCTGTGGGCAGACATCAGGGGTCTaGGCAAGCCACACAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: TTRGQQDLHPGERGGACGQTSGV*ASHTAW Trigger: CCATGCTGTGTGGCTTGCCAAGACCCCTGATGTCTG...CCCACAGGCCCCACCCCTTTCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS GCA 90 bp | CCATGCATCTGTCCCGACACTCCGATGCCCCGGACTCTCTGGAGCTaGTGCCGGGGAAGGGCATCAAGGCATTCATTTAGGGCTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PCICPDTPMPRTLWS*CRGRASRHSFRAWM Trigger: CATCCAAGCCCTAAATGAATGCCTTGATGCCCTTCCCCGGCAGCAGCTCCAGAGAGTCCGGGGCATCGGAGTGTCGGGACAGATGCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS GCA 90 bp | CTGCTTTCCAAAATAGGATGCCATGCATCTGTCCCGACACTCCGATaGCCCGGACTCTCTGGAGCTGCTGCCGGGGAAGGGCATCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSKIGCHASVPTLR*PGLSGAAAGEGHQG Trigger: GCCTTGATGCCCTTCCCCGGCAGCAGCTCCAGAGAGTCCGGGGCATCGGAGTGTCGGGACAGATGCATGGCATCCTATTTTGGAAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS CCA 90 bp | AGGATGCCATGCATCTGTCCCGACACTCCGATGCCCCGGACTCTCTaGAGCTGCTGCCGGGGAAGGGCATCAAGGCATTCATTTAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RMPCICPDTPMPRTL*SCCRGRASRHSFRA Trigger: AGCCCTAAATGAATGCCTTGATGCCCTTCCCCGGCAGCAGCTCCAGAGAGTCCGGGGCATCGGAGTGTCGGGACAGATGCATGGCATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS GCA 90 bp | TGCATCTGTCCCGACACTCCGATGCCCCGGACTCTCTGGAGCTGCTaGCGGGGAAGGGCATCAAGGCATTCATTTAGGGCTTGGATGATT | + |
|
Preference number: 5 (lower is better) Translates to: CICPDTPMPRTLWSC*RGRASRHSFRAWMI Trigger: AATCATCCAAGCCCTAAATGAATGCCTTGATGCCCTTCCCCGGCAGCAGCTCCAGAGAGTCCGGGGCATCGGAGTGTCGGGACAGATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS TCA 90 bp | GCAGAGAAGCCAGGAAACTACTGTTACAACGGCCATCCTGCCATGTaGCCAAGTGGCTCACAGCTCTGGGCTCAAATACAAAGGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AEKPGNYCYNGHPAM*PSGSQLWAQIQRQA Trigger: GGCCTGCCTTTGTATTTGAGCCCAGAGCTGTGAGCCACTTGGTCACATGGCAGGATGGCCGTTGTAACAGTAGTTTCCTGGCTTCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS CCA 90 bp | GATGGTTGCACAGCCGAATCCTGTGGCCACACTGAGATGGGAATCTaGCTTGGGCAGAGAAGCCAGGAAACTACTGTTACAACGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: DGCTAESCGHTEMGI*LGQRSQETTVTTAI Trigger: GATGGCCGTTGTAACAGTAGTTTCCTGGCTTCTCTGCCCAAGCCAGATTCCCATCTCAGTGTGGCCACAGGATTCGGCTGTGCAACCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS GCA 90 bp | GGCTTGGGCAGAGAAGCCAGGAAACTACTGTTACAACGGCCATCCTaGCATGTGACCAAGTGGCTCACAGCTCTGGGCTCAAATACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLGREARKLLLQRPS*HVTKWLTALGSNTK Trigger: CTTTGTATTTGAGCCCAGAGCTGTGAGCCACTTGGTCACATGGCAGGATGGCCGTTGTAACAGTAGTTTCCTGGCTTCTCTGCCCAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS CCA 90 bp | GGCTCAAATACAAAGGCAGGCCCTCCCTCCATCCATTCACAGCCTTaGCCTGCTTTCCAAAATAGGATGCCATGCATCTGTCCCGACACT | + |
|
Preference number: 5 (lower is better) Translates to: GSNTKAGPPSIHSQP*PAFQNRMPCICPDT Trigger: AGTGTCGGGACAGATGCATGGCATCCTATTTTGGAAAGCAGGCCAAGGCTGTGAATGGATGGAGGGAGGGCCTGCCTTTGTATTTGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS CCA 90 bp | CTTCTTCCTTCCCAGAAGCACACGCCAAACAAGAAGGCAGCAGGCTaGCTCCGTGAAATTTTAAGCAGCACTTCCAGTGACGTGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLPSQKHTPNKKAAG*LREILSSTSSDVAW Trigger: CCAAGCCACGTCACTGGAAGTGCTGCTTAAAATTTCACGGAGCCAGCCTGCTGCCTTCTTGTTTGGCGTGTGCTTCTGGGAAGGAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| CDS-3UTR CAA 90 bp | AAATTACAGTCCACCCACAGAGCCGTCCCAGAAAAGGACAACCCAGAGATCATGAGCACATTGCCTCCATaGAGTGACGCTGCCACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KLQSTHRAVPEKDNPEIMSTLPP*SDAATP Trigger: AGGGGTGGCAGCGTCACTCAATGGAGGCAATGTGCT...CATGATCTCTGGGTTGTCCTTTTCTGGGACGGCTCTGTGGGTGGACTGTAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CAA 90 bp | ACATTCCTACTGGGCCAGAACCACCAGAGGGCAGCAAGATCTTCACCCTGGAGACCACTCTTTGAGCTGTaGGAAAGGAAGCATGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFLLGQNHQRAARSSPWRPLFEL*ERKHGV Trigger: CACTCCATGCTTCCTTTCCAACAGCTCAAAGAGTGG...TCTCCAGGGTGAAGATCTTGCTGCCCTCTGGTGGTTCTGGCCCAGTAGGAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS TCA 90 bp | TCAAAAGCCAGAAGATGGTTGCACAGCCGAATCCTGTGGCCACACTaGGATGGGAATCTGGCTTGGGCAGAGAAGCCAGGAAACTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SKARRWLHSRILWPH*DGNLAWAEKPGNYC Trigger: ACAGTAGTTTCCTGGCTTCTCTGCCCAAGCCAGATTCCCATCTCAGTGTGGCCACAGGATTCGGCTGTGCAACCATCTTCTGGCTTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS CCA 90 bp | GGCTGGCTCCGTGAAATTTTAAGCAGCACTTCCAGTGACGTGGCTTaGCCTGCTTTCCAAAATAGGATGCCATGCATCTGTCCCGACACT | + |
|
Preference number: 5 (lower is better) Translates to: GWLREILSSTSSDVA*PAFQNRMPCICPDT Trigger: AGTGTCGGGACAGATGCATGGCATCCTATTTTGGAAAGCAGGCCAAGCCACGTCACTGGAAGTGCTGCTTAAAATTTCACGGAGCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGCTACATAAGTCAAGATGGGAATCTGGCTaGGGCAGAGAAGCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGHKQVFSALLEPWLHKSRWESG*GREARK Trigger: TTTCCTGGCTTCTCTGCCCAAGCCAGATTCCCATCT...TGACTTATGTAGCCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CAA 90 bp | ACCAATCCAAGTGCTGGGCATAAGCAGGTCTTCTCTGCTTTGCTGGAGCCATGGACCGAGGTGCTGATGTaGAGAACTGCATCAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TNPSAGHKQVFSALLEPWTEVLM*RTASVL Trigger: AAGGACTGATGCAGTTCTCAACATCAGCACCTCGGT...CCATGGCTCCAGCAAAGCAGAGAAGACCTGCTTATGCCCAGCACTTGGATTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CAA 90 bp | AAATTACAGTCCACCCACAGAGCCGTCCCAGAAAAGGACAACCCAGAGATCATGAACGTGGCCAGCACATaGCCTCCATTGAGTGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: KLQSTHRAVPEKDNPEIMNVAST*PPLSDA Trigger: AGCGTCACTCAATGGAGGCAATGTGCTGGCCACGTT...CATGATCTCTGGGTTGTCCTTTTCTGGGACGGCTCTGTGGGTGGACTGTAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTGCTCTGTGGAAAGCCAGAAGATGGTaGCACAGCCGAATCCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CCHLENSLSVSVPHSALWKARRW*HSRILW Trigger: CCACAGGATTCGGCTGTGCAACCATCTTCTGGCTTT...CCACAGAGCACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CAA 90 bp | TGCCATCTTGAAAACAGTCTGTCAGTCAGTGTTCCTCACAGTGCTCTGTGGTCCCCACCTGTGTCCCCTTaGGGATTTCAAACCATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CHLENSLSVSVPHSALWSPPVSP*GFQTMC Trigger: ACACATGGTTTGAAATCCCAAAGGGGACACAGGTGG...GGACCACAGAGCACTGTGAGGAACACTGACTGACAGACTGTTTTCAAGATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CAA 90 bp | CATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATTCTTGGAAGGCACTAGTTGCCACACCCCACTCTTaGAGCTGTTGGAAAGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLHFQSALRRSYSWKALVATPHS*SCWKGS Trigger: GCTTCCTTTCCAACAGCTCAAAGAGTGGGGTGTGGC...AACTAGTGCCTTCCAAGAATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS-3UTR CAA 90 bp | CATCTGCATTTTCAGTCAGCTCTCAGAAGATCCTATTCTTGGAAGGCACTAGTTAACTGCATCAGTCCTTaGGCCCATGCAGGAATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HLHFQSALRRSYSWKALVNCISP*AHAGID Trigger: GTCTATTCCTGCATGGGCCAAAGGACTGATGCAGTT...AACTAGTGCCTTCCAAGAATAGGATCTTCTGAGAGCTGACTGAAAATGCAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS CCA 72 bp | CGCAGCTCGCCAGCACCACGAACCCGGATGGGAGGCTaGGTGCAGCCTCCAATAGGGCGGCCTTCACGGACG | + |
|
Preference number: 6 (lower is better) Translates to: RSSPAPRTRMGG*VQPPIGRPSRT Trigger: CGTCCGTGAAGGCCGCCCTATTGGAGGCTGCACCCAGCCTCCCATCCGGGTTCGTGGTGCTGGCGAGCTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS CCA 72 bp | GCTTGGATGATTCTAGTCACATCCTGCTCCCGCCCCTaGGGCCCGGCCACCGCGCTCTCAGTCTCTGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AWMILVTSCSRP*GPATALSVSAL Trigger: GAGGGCAGAGACTGAGAGCGCGGTGGCCGGGCCCCAGGGGCGGGAGCAGGATGTGACTAGAATCATCCAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS GCA 72 bp | CCCGACACTCCGATGCCCCGGACTCTCTGGAGCTGCTaGCGGGGAAGGGCATCAAGGCATTCATTTAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PDTPMPRTLWSC*RGRASRHSFRA Trigger: AGCCCTAAATGAATGCCTTGATGCCCTTCCCCGGCAGCAGCTCCAGAGAGTCCGGGGCATCGGAGTGTCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS CCA 72 bp | TGCATCTGTCCCGACACTCCGATGCCCCGGACTCTCTaGAGCTGCTGCCGGGGAAGGGCATCAAGGCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: CICPDTPMPRTL*SCCRGRASRHS Trigger: TGAATGCCTTGATGCCCTTCCCCGGCAGCAGCTCCAGAGAGTCCGGGGCATCGGAGTGTCGGGACAGATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS GCA 72 bp | TGTCCCGACACTCCGATGCCCCGGACTCTCTGGAGCTaGTGCCGGGGAAGGGCATCAAGGCATTCATTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: CPDTPMPRTLWS*CRGRASRHSFR Trigger: CCTAAATGAATGCCTTGATGCCCTTCCCCGGCAGCAGCTCCAGAGAGTCCGGGGCATCGGAGTGTCGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS GCA 72 bp | AAAATAGGATGCCATGCATCTGTCCCGACACTCCGATaGCCCGGACTCTCTGGAGCTGCTGCCGGGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: KIGCHASVPTLR*PGLSGAAAGEG Trigger: CCCTTCCCCGGCAGCAGCTCCAGAGAGTCCGGGGCATCGGAGTGTCGGGACAGATGCATGGCATCCTATTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS CCA 72 bp | TGCCGGGGAAGGGCATCAAGGCATTCATTTAGGGCTTaGATGATTCTAGTCACATCCTGCTCCCGCCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CRGRASRHSFRA*MILVTSCSRPW Trigger: CCAGGGGCGGGAGCAGGATGTGACTAGAATCATCCAAGCCCTAAATGAATGCCTTGATGCCCTTCCCCGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006105.7 ENSMUST00000131927.9 |
||
| CDS TCA 72 bp | AGAAGATGGTTGCACAGCCGAATCCTGTGGCCACACTaGGATGGGAATCTGGCTTGGGCAGAGAAGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RRWLHSRILWPH*DGNLAWAEKPG Trigger: TCCTGGCTTCTCTGCCCAAGCCAGATTCCCATCTCAGTGTGGCCACAGGATTCGGCTGTGCAACCATCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS GCA 72 bp | AGAGAAGCCAGGAAACTACTGTTACAACGGCCATCCTaGCATGTGACCAAGTGGCTCACAGCTCTGGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: REARKLLLQRPS*HVTKWLTALGS Trigger: TGAGCCCAGAGCTGTGAGCCACTTGGTCACATGGCAGGATGGCCGTTGTAACAGTAGTTTCCTGGCTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS CCA 72 bp | TCCCAGAAGCACACGCCAAACAAGAAGGCAGCAGGCTaGCTCCGTGAAATTTTAAGCAGCACTTCCAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SQKHTPNKKAAG*LREILSSTSSD Trigger: GTCACTGGAAGTGCTGCTTAAAATTTCACGGAGCCAGCCTGCTGCCTTCTTGTTTGGCGTGTGCTTCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||
| CDS TCA 72 bp | CCAGGAAACTACTGTTACAACGGCCATCCTGCCATGTaGCCAAGTGGCTCACAGCTCTGGGCTCAAATACAA | + |
|
Preference number: 6 (lower is better) Translates to: PGNYCYNGHPAM*PSGSQLWAQIQ Trigger: TTGTATTTGAGCCCAGAGCTGTGAGCCACTTGGTCACATGGCAGGATGGCCGTTGTAACAGTAGTTTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006105.7 |
||
| CDS CCA 72 bp | CGTGAAATTTTAAGCAGCACTTCCAGTGACGTGGCTTaGCCTGCTTTCCAAAATAGGATGCCATGCATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: REILSSTSSDVA*PAFQNRMPCIC Trigger: ACAGATGCATGGCATCCTATTTTGGAAAGCAGGCCAAGCCACGTCACTGGAAGTGCTGCTTAAAATTTCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131927.9 |
||