Pregenerated sensors for SHOC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024976Ensembl transcript IDs: ENSMUST00000025932.9, ENSMUST00000169861.9, ENSMUST00000237801.2, ENSMUST00000237908.2
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGAGCAGGTTCTCTCCAAGACCAAGGTGCGTGAGGTTGGTAAGGTaGCCGATGCCTCTGGGAAGCGTGCTCAACTGGTTGTTTGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: VSRFSPRPRCVRLVR*PMPLGSVLNWLFVK Trigger: CTTGACAAACAACCAGTTGAGCACGCTTCCCAGAGGCATCGGTCACCTTACCAACCTCACGCACCTTGGTCTTGGAGAGAACCTGCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR GCA 90 bp | CCTCTGGGAAGCGTGCTCAACTGGTTGTTTGTCAAGACTAATTTCTaGAGATCCTTGAGATACGCGATCTCATTGGGCAAGGACTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: PLGSVLNWLFVKTNF*RSLRYAISLGKDSS Trigger: GCTGGAGTCCTTGCCCAATGAGATCGCGTATCTCAAGGATCTGCAGAAATTAGTCTTGACAAACAACCAGTTGAGCACGCTTCCCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR TCA 90 bp | GCGTGCTCAACTGGTTGTTTGTCAAGACTAATTTCTGCAGATCCTTaGGATACGCGATCTCATTGGGCAAGGACTCCAGCTTGTTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: ACSTGCLSRLISADP*DTRSHWARTPACSP Trigger: AGGAGAACAAGCTGGAGTCCTTGCCCAATGAGATCGCGTATCTCAAGGATCTGCAGAAATTAGTCTTGACAAACAACCAGTTGAGCACGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR GCA 90 bp | AGTGCATTTAGTTCAGCAGCAATACAGCACAGTGTGAAGATATTGTaGTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAG | + |
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Preference number: 1 (lower is better) Translates to: SAFSSAAIQHSVKIL*LDTDTPEQTDGHGE Trigger: CTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGTATTGCTGCTGAACTAAATGCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR TCA 90 bp | TCAAGGGAAACGAGACCAGACACATCCTCTGGGATCTTTGTGAGCTaGTTAGTCGCTAAATTCAATTCTACCATACTGGTCCAAGTTCCA | + |
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Preference number: 1 (lower is better) Translates to: SRETRPDTSSGIFVS*LVAKFNSTILVQVP Trigger: TGGAACTTGGACCAGTATGGTAGAATTGAATTTAGCGACTAATCAGCTCACAAAGATCCCAGAGGATGTGTCTGGTCTCGTTTCCCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR-3UTR CCA 90 bp | ACCGATTTCCTCAGGAAGGTGAGTGAGCAGGTTCTCTCCAAGACCAAGGTGCGTAGGTTCCCAAGGCCGTaGGGCAGCTTCTTTAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: TDFLRKVSEQVLSKTKVRRFPRP*GSFFRR Trigger: CCTTCTAAAGAAGCTGCCCCACGGCCTTGGGAACCT...ACGCACCTTGGTCTTGGAGAGAACCTGCTCACTCACCTTCCTGAGGAAATCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR-3UTR TCA 90 bp | CCCGGGGATGGGGAAAGTGCATTTAGTTCAGCAGCAATACAGCACAGTGTGAAGATGGCAGTCTATTTTTaGACAGTGTGTGGGACCAGC | + |
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Preference number: 2 (lower is better) Translates to: PGDGESAFSSAAIQHSVKMAVYF*TVCGTS Trigger: GCTGGTCCCACACACTGTTCAAAAATAGACTGCCAT...CTTCACACTGTGCTGTATTGCTGCTGAACTAAATGCACTTTCCCCATCCCCGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGACTCCAGCTTGTTCTCCTCCAGGTCCAGCTCTCGTAGCTTTCTGAGGTTCGATTGTGTTCCATGTTaGGGGAATAAATGGTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KDSSLFSSRSSSRSFLRFDCVPC*GNKWWK Trigger: TTTCCACCATTTATTCCCTCAACATGGAACACAATC...GAACCTCAGAAAGCTACGAGAGCTGGACCTGGAGGAGAACAAGCTGGAGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGACTCCAGCTTGTTCTCCTCCAGGTCCAGCTCTCGTAGCTTTCTGAGGTTCGGAAGTGATGTTAACTaGTTGTCCTTCATATTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: KDSSLFSSRSSSRSFLRFGSDVN*LSFIFS Trigger: GCTGAATATGAAGGACAATCAGTTAACATCACTTCC...GAACCTCAGAAAGCTACGAGAGCTGGACCTGGAGGAGAACAAGCTGGAGTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR-3UTR TCA 90 bp | ACCGATTTCCTCAGGAAGGTGAGTGAGCAGGTTCTCTCCAAGACCAAGGTGCGTGGGATCTTTGTGAGCTaGTTAGTCGCTAAATTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: TDFLRKVSEQVLSKTKVRGIFVS*LVAKFN Trigger: ATTGAATTTAGCGACTAATCAGCTCACAAAGATCCC...ACGCACCTTGGTCTTGGAGAGAACCTGCTCACTCACCTTCCTGAGGAAATCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGGGGATGGGGAAAGTGCATTTAGTTCAGCAGCAATACAGCACAGTGTGAAGTTCACCACAGATTTCTaGTCCCACACAGTGAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: PGDGESAFSSAAIQHSVKFTTDF*SHTVKH Trigger: ATGTTTCACTGTGTGGGAGCAGAAATCTGTGGTGAA...CTTCACACTGTGCTGTATTGCTGCTGAACTAAATGCACTTTCCCCATCCCCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGAATGGCAGTCTATTTTTaGACAGTGTGTGGGACCAGC | + |
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Preference number: 2 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRMAVYF*TVCGTS Trigger: GCTGGTCCCACACACTGTTCAAAAATAGACTGCCAT...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAATTCACCACAGATTTCTaGTCCCACACAGTGAAACAT | + |
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Preference number: 2 (lower is better) Translates to: CFKIISRMRLLWGWGSSQFTTDF*SHTVKH Trigger: ATGTTTCACTGTGTGGGAGCAGAAATCTGTGGTGAA...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGACTCCAGCTTGTTCTCCTCCAGGTCCAGCTCTCGTAGCTTTCTGAGGTTCTCAATTCTACCATACTaGTCCAAGTTCCAAAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: KDSSLFSSRSSSRSFLRFSILPY*SKFQNP Trigger: TGGATTTTGGAACTTGGACCAGTATGGTAGAATTGA...GAACCTCAGAAAGCTACGAGAGCTGGACCTGGAGGAGAACAAGCTGGAGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR CAA 90 bp | GAAAGTGCATTTAGTTCAGCAGCAATACAGCACAGTGTGAAGATATaGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGC | + |
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Preference number: 2 (lower is better) Translates to: ESAFSSAAIQHSVKI*CLDTDTPEQTDGHG Trigger: GCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGTATTGCTGCTGAACTAAATGCACTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGATGGCAGTCTATTTTTaGACAGTGTGTGGGACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: IVWKLCFKIISRMRLLWGMAVYF*TVCGTS Trigger: GCTGGTCCCACACACTGTTCAAAAATAGACTGCCAT...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR-3UTR GCA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCAAGTGTGAAGATATTGTaGTTAGACACAGATACCCCC | + |
|
Preference number: 2 (lower is better) Translates to: LSKSPCTYYISPTELPMASVKIL*LDTDTP Trigger: GGGGGTATCTGTGTCTAAGCACAATATCTTCACACT...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR CAA 90 bp | TTGCCAATTATGAACACAGATTTGACCTCAAACCCAGTCTTGAGTTaGAGTGCCAGGAAAAGCAAAAATCCAAATGTTTATCTTGATATT | + |
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Preference number: 2 (lower is better) Translates to: LPIMNTDLTSNPVLS*SARKSKNPNVYLDI Trigger: AATATCAAGATAAACATTTGGATTTTTGCTTTTCCTGGCACTCAAACTCAAGACTGGGTTTGAGGTCAAATCTGTGTTCATAATTGGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000237908.2 |
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| 3UTR CAA 90 bp | ACAAATTTGCCAATTATGAACACAGATTTGACCTCAAACCCAGTCTaGAGTTTGAGTGCCAGGAAAAGCAAAAATCCAAATGTTTATCTT | + |
|
Preference number: 2 (lower is better) Translates to: TNLPIMNTDLTSNPV*SLSARKSKNPNVYL Trigger: AAGATAAACATTTGGATTTTTGCTTTTCCTGGCACTCAAACTCAAGACTGGGTTTGAGGTCAAATCTGTGTTCATAATTGGCAAATTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000237908.2 |
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| 3UTR-3UTR CAA 90 bp | ACCGATTTCCTCAGGAAGGTGAGTGAGCAGGTTCTCTCCAAGACCAAGGTGCGTGGCAAGGACTCCAGCTaGTTCTCCTCCAGGTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TDFLRKVSEQVLSKTKVRGKDSS*FSSRSS Trigger: GCTGGACCTGGAGGAGAACAAGCTGGAGTCCTTGCC...ACGCACCTTGGTCTTGGAGAGAACCTGCTCACTCACCTTCCTGAGGAAATCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR TCA 72 bp | GCTTGTTCTCCTCCAGGTCCAGCTCTCGTAGCTTTCTaGGGTTCCCAAGGCCGTGGGGCAGCTTCTTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ACSPPGPALVAF*GSQGRGAASLE Trigger: TTCTAAAGAAGCTGCCCCACGGCCTTGGGAACCTCAGAAAGCTACGAGAGCTGGACCTGGAGGAGAACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAACACAGTGTGAAGATATaGTGCTTAGACACAGATACC | + |
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Preference number: 3 (lower is better) Translates to: CFKIISRMRLLWGWGSSQHSVKI*CLDTDT Trigger: GGTATCTGTGTCTAAGCACAATATCTTCACACTGTG...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGACTCCAGCTTGTTCTCCTCCAGGTCCAGCTCTCGTAGCTTTCTGAGGTTCATTTTGTTGATTCGATaGTGTTCCATGTTGAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: KDSSLFSSRSSSRSFLRFILLIR*CSMLRE Trigger: TTCCCTCAACATGGAACACAATCGAATCAACAAAAT...GAACCTCAGAAAGCTACGAGAGCTGGACCTGGAGGAGAACAAGCTGGAGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR-3UTR CAA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGAGATGCAACAAATTTTaGGCCCACATTTTCCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: LHKSHRTPNGINAMCRSPRCNKF*AHIFLR Trigger: TCTTAGGAAAATGTGGGCCAAAAATTTGTTGCATCT...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR TCA 72 bp | ACTGGTTGTTTGTCAAGACTAATTTCTGCAGATCCTTaGGATACGCGATCTCATTGGGCAAGGACTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: TGCLSRLISADP*DTRSHWARTPA Trigger: AGCTGGAGTCCTTGCCCAATGAGATCGCGTATCTCAAGGATCTGCAGAAATTAGTCTTGACAAACAACCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR GCA 72 bp | AGTTCAGCAGCAATACAGCACAGTGTGAAGATATTGTaGTTAGACACAGATACCCCCGAACAGACAGATGGA | + |
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Preference number: 3 (lower is better) Translates to: SSAAIQHSVKIL*LDTDTPEQTDG Trigger: TCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGTATTGCTGCTGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR GCA 72 bp | AGCGTGCTCAACTGGTTGTTTGTCAAGACTAATTTCTaGAGATCCTTGAGATACGCGATCTCATTGGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: SVLNWLFVKTNF*RSLRYAISLGK Trigger: CTTGCCCAATGAGATCGCGTATCTCAAGGATCTGCAGAAATTAGTCTTGACAAACAACCAGTTGAGCACGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR-3UTR CAA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGAAGATGCAACAAATTTTaGGCCCACATTTTCCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: LCLDTDTPEQTDGHGESRRCNKF*AHIFLR Trigger: TCTTAGGAAAATGTGGGCCAAAAATTTGTTGCATCT...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR-3UTR CAA 90 bp | CGATGCCTCTGGGAAGCGTGCTCAACTGGTTGTTTGTCAAGACTAATTTCTGCACCAAATGGGATTTTGTaGATTCGATTGTGTTCCATG | + |
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Preference number: 3 (lower is better) Translates to: RCLWEACSTGCLSRLISAPNGIL*IRLCSM Trigger: CATGGAACACAATCGAATCAACAAAATCCCATTTGG...TGCAGAAATTAGTCTTGACAAACAACCAGTTGAGCACGCTTCCCAGAGGCATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR TCA 72 bp | ACGAGACCAGACACATCCTCTGGGATCTTTGTGAGCTaGTTAGTCGCTAAATTCAATTCTACCATACTGGTC | + |
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Preference number: 3 (lower is better) Translates to: TRPDTSSGIFVS*LVAKFNSTILV Trigger: GACCAGTATGGTAGAATTGAATTTAGCGACTAATCAGCTCACAAAGATCCCAGAGGATGTGTCTGGTCTCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| 3UTR-3UTR CAA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCAAATGGCAGTCTATTTTaGAACAGTGTGTGGGACCAG | + |
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Preference number: 3 (lower is better) Translates to: LSKSPCTYYISPTELPMANGSLF*NSVWDQ Trigger: CTGGTCCCACACACTGTTCAAAAATAGACTGCCATT...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCAATGGCAGTCTATTTTaGAACAGTGTGTGGGACCAG | + |
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Preference number: 3 (lower is better) Translates to: TDGHGESRYKTIVHCHLTNGSLF*NSVWDQ Trigger: CTGGTCCCACACACTGTTCAAAAATAGACTGCCATT...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| 3UTR-3UTR CAA 90 bp | CGATGCCTCTGGGAAGCGTGCTCAACTGGTTGTTTGTCAAGACTAATTTCTGCAATTCCAAATGGGATTTaGTTGATTCGATTGTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: RCLWEACSTGCLSRLISAIPNGI*LIRLCS Trigger: GGAACACAATCGAATCAACAAAATCCCATTTGGAAT...TGCAGAAATTAGTCTTGACAAACAACCAGTTGAGCACGCTTCCCAGAGGCATCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
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| CDS-3UTR TCA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAAGTGAGGTTGGTAAGGTaGCCGATGCCTCTGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: CFKIISRMRLLWGWGSSQVRLVR*PMPLGS Trigger: GCTTCCCAGAGGCATCGGTCACCTTACCAACCTCAC...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS-3UTR TCA 90 bp | CCCGGGGATGGGGAAAGTGCATTTAGTTCAGCAGCAATACAGCACAGTGTGAAGTCAAAGGGGAGGCTGTaGAGGTTGGGGTTGTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: PGDGESAFSSAAIQHSVKSKGRL*RLGLSF Trigger: GAACGACAACCCCAACCTTCACAGCCTCCCCTTTGA...CTTCACACTGTGCTGTATTGCTGCTGAACTAAATGCACTTTCCCCATCCCCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS-3UTR CCA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGAGGTTCCCAAGGCCGTaGGGCAGCTTCTTTAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LHKSHRTPNGINAMCRSPRFPRP*GSFFRR Trigger: CCTTCTAAAGAAGCTGCCCCACGGCCTTGGGAACCT...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS-3UTR CCA 90 bp | CCCGGGGATGGGGAAAGTGCATTTAGTTCAGCAGCAATACAGCACAGTGTGAAGAGGTTCCCAAGGCCGTaGGGCAGCTTCTTTAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PGDGESAFSSAAIQHSVKRFPRP*GSFFRR Trigger: CCTTCTAAAGAAGCTGCCCCACGGCCTTGGGAACCT...CTTCACACTGTGCTGTATTGCTGCTGAACTAAATGCACTTTCCCCATCCCCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS-3UTR TCA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCGTGAGGTTGGTAAGGTaGCCGATGCCTCTGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: DTDTPEQTDGHGESRYKTVRLVR*PMPLGS Trigger: GCTTCCCAGAGGCATCGGTCACCTTACCAACCTCAC...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS-3UTR TCA 90 bp | CCCGGGGATGGGGAAAGTGCATTTAGTTCAGCAGCAATACAGCACAGTGTGAAGGATGGTATTGTCGACTaGAAAAGCCACACCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PGDGESAFSSAAIQHSVKDGIVD*KSHTWL Trigger: CAGCCAGGTGTGGCTTTTTCAGTCGACAATACCATC...CTTCACACTGTGCTGTATTGCTGCTGAACTAAATGCACTTTCCCCATCCCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS-3UTR TCA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAACAGCAGGCAGCTGCTTaGTTTTGTTCTCTCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: CFKIISRMRLLWGWGSSQQQAAA*FCSLGC Trigger: GCATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTG...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS-3UTR CCA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGGATACGCGATCTCATTaGGCAAGGACTCCAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LHKSHRTPNGINAMCRSPDTRSH*ARTPAC Trigger: ACAAGCTGGAGTCCTTGCCCAATGAGATCGCGTATC...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS-3UTR TCA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGAGATGGTATTGTCGACTaGAAAAGCCACACCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LCLDTDTPEQTDGHGESRDGIVD*KSHTWL Trigger: CAGCCAGGTGTGGCTTTTTCAGTCGACAATACCATC...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS-3UTR TCA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGAAGGCAAACTGGTGAGTaGATTCTCACTGAGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCLDTDTPEQTDGHGESRRQTGE*ILTESQ Trigger: CTGGCTCTCAGTGAGAATTCACTCACCAGTTTGCCT...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS-3UTR TCA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGGTGAGGTTGGTAAGGTaGCCGATGCCTCTGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVWKLCFKIISRMRLLWGVRLVR*PMPLGS Trigger: GCTTCCCAGAGGCATCGGTCACCTTACCAACCTCAC...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGACCTCAGGAAGGTGAGTaGGCAGGTTCTCTCCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRPQEGE*AGSLQD Trigger: GTCTTGGAGAGAACCTGCTCACTCACCTTCCTGAGG...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGAATTTCCTCAGGAAGGTaGGTGAGCAGGTTCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCLDTDTPEQTDGHGESRISSGR*VSRFSP Trigger: TGGAGAGAACCTGCTCACTCACCTTCCTGAGGAAAT...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGCTCAATACTCATGATTaGCAGCTTGCTGCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHKSHRTPNGINAMCRSPLNTHD*QLAAES Trigger: GCTCTCTGCAGCAAGCTGTCAATCATGAGTATTGAG...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| 3UTR CAA 72 bp | AGGTTCCCAAGGCCGTGGGGCAGCTTCTTTAGAAGGTaGTTCGATAAGATCAGAACCTCAAGGGAAACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RFPRPWGSFFRR*FDKIRTSRETR Trigger: TCTCGTTTCCCTTGAGGTTCTGATCTTATCGAACAACCTTCTAAAGAAGCTGCCCCACGGCCTTGGGAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
||
| CDS-3UTR TCA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCAGGCAAACTGGTGAGTaGATTCTCACTGAGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTDTPEQTDGHGESRYKTRQTGE*ILTESQ Trigger: CTGGCTCTCAGTGAGAATTCACTCACCAGTTTGCCT...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR TCA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGACAGCAGGCAGCTGCTTaGTTTTGTTCTCTCGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRQQAAA*FCSLGC Trigger: GCATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTG...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGACTCAATACTCATGATTaGCAGCTTGCTGCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLDTDTPEQTDGHGESRLNTHD*QLAAES Trigger: GCTCTCTGCAGCAAGCTGTCAATCATGAGTATTGAG...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAATTTTCTAGTGCCGGGTaGTGGATTTGGCCGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CFKIISRMRLLWGWGSSQFSSAG*WIWPFD Trigger: ATCAAACGGCCAAATCCAGCACCCGGCACTAGAAAA...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR GCA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGATTTCAGCAGGCAGCTaGTTGATTTTGTTCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LHKSHRTPNGINAMCRSPISAGS*LILFSR Trigger: CCGAGAGAACAAAATCAAGCAGCTGCCTGCTGAAAT...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAAGAAGATAGAGAGTGGTaGGAGAGTCTAGCCTATACA | + |
|
Preference number: 4 (lower is better) Translates to: CFKIISRMRLLWGWGSSQEDREW*ESLAYT Trigger: TGTATAGGCTAGACTCTCTCACCACTCTCTATCTTC...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGCAGCAGGCAGCTGCTTaGTTTTGTTCTCTCGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: IVWKLCFKIISRMRLLWGQQAAA*FCSLGC Trigger: GCATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTG...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGCCTCAGGAAGGTGAGTaGGCAGGTTCTCTCCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLYGSCVSRLYLGCACSGPQEGE*AGSLQD Trigger: GTCTTGGAGAGAACCTGCTCACTCACCTTCCTGAGG...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGTCAAAGGGGAGGCTGTaGAGGTTGGGGTTGTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLYGSCVSRLYLGCACSGSKGRL*RLGLSF Trigger: GAACGACAACCCCAACCTTCACAGCCTCCCCTTTGA...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCTCAAAGGGGAGGCTGTaGAGGTTGGGGTTGTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGHGESRYKTIVHCHLTSKGRL*RLGLSF Trigger: GAACGACAACCCCAACCTTCACAGCCTCCCCTTTGA...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGAATTTCAGCAGGCAGCTaGTTGATTTTGTTCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLDTDTPEQTDGHGESRISAGS*LILFSR Trigger: CCGAGAGAACAAAATCAAGCAGCTGCCTGCTGAAAT...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGATGCCTCTGGGAAGCGTaGTCAACTGGTTGTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRCLWEA*STGCLS Trigger: TGACAAACAACCAGTTGAGCACGCTTCCCAGAGGCA...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CCA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGAGGTTCCCAAGGCCGTaGGGCAGCTTCTTTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLYGSCVSRLYLGCACSGRFPRP*GSFFRR Trigger: CCTTCTAAAGAAGCTGCCCCACGGCCTTGGGAACCT...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGCAAGTCCAACCGCATTaGGTTCTCCTCCCGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SLYGSCVSRLYLGCACSGQVQPH*VLLPAF Trigger: AAATGCCGGGAGGAGAACTCAATGCGGTTGGACTTG...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR TCA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGAGTCAACTCTTTGACTaGTGGTGGCAGTATATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LHKSHRTPNGINAMCRSPSQLFD*WWQYMY Trigger: ATACATATACTGCCACCATCAGTCAAAGAGTTGACT...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR TCA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCGAAGATAGAGAGTGGTaGGAGAGTCTAGCCTATACA | + |
|
Preference number: 4 (lower is better) Translates to: DTDTPEQTDGHGESRYKTEDREW*ESLAYT Trigger: TGTATAGGCTAGACTCTCTCACCACTCTCTATCTTC...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGGATTGTGTTCCATGTTaGGGGAATAAATGGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHKSHRTPNGINAMCRSPDCVPC*GNKWWK Trigger: TTTCCACCATTTATTCCCTCAACATGGAACACAATC...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGGGAAGTGATGTTAACTaGTTGTCCTTCATATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHKSHRTPNGINAMCRSPGSDVN*LSFIFS Trigger: GCTGAATATGAAGGACAATCAGTTAACATCACTTCC...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | CCCGGGGATGGGGAAAGTGCATTTAGTTCAGCAGCAATACAGCACAGTGTGAAGGGGATCTTTGTGAGCTaGTTAGTCGCTAAATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGDGESAFSSAAIQHSVKGIFVS*LVAKFN Trigger: ATTGAATTTAGCGACTAATCAGCTCACAAAGATCCC...CTTCACACTGTGCTGTATTGCTGCTGAACTAAATGCACTTTCCCCATCCCCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGATTTCCTCAGGAAGGTaGGTGAGCAGGTTCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVWKLCFKIISRMRLLWGISSGR*VSRFSP Trigger: TGGAGAGAACCTGCTCACTCACCTTCCTGAGGAAAT...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGTCTCTCAGTTTATTATaGCGTAAATCAAGCATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LHKSHRTPNGINAMCRSPSLSLL*RKSSIR Trigger: GCGGATGCTTGATTTACGGCATAATAAACTGAGAGA...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGAAGTAGGTCATTGTGCTaGAAGTCAAGGTTGGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LCLDTDTPEQTDGHGESRSRSLC*KSRLVI Trigger: GATAACCAACCTTGACTTGCAGCACAATGACCTACT...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGGATACGCGATCTCATTaGGCAAGGACTCCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IVWKLCFKIISRMRLLWGDTRSH*ARTPAC Trigger: ACAAGCTGGAGTCCTTGCCCAATGAGATCGCGTATC...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CCA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGCAAGGCGATTTAAACTaGACAGGTTTCCAATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHKSHRTPNGINAMCRSPQGDLN*TGFQFQ Trigger: CTGAAATTGGAAACCTGTCCAGTTTAAATCGCCTTG...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGACTGGATTTGGCCGTTTaGTGGTATTGTCGACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRLDLAV*WYCRLK Trigger: TTTCAGTCGACAATACCATCAAACGGCCAAATCCAG...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR TCA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCGTTGAGTCAACTCTTTaGCTGATGGTGGCAGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: DTDTPEQTDGHGESRYKTVESTL*LMVAVY Trigger: ATATACTGCCACCATCAGTCAAAGAGTTGACTCAAC...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR TCA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGAGGAAGTGATGTTAACTaGTTGTCCTTCATATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLDTDTPEQTDGHGESRGSDVN*LSFIFS Trigger: GCTGAATATGAAGGACAATCAGTTAACATCACTTCC...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCAATTTCCTCAGGAAGGTaGGTGAGCAGGTTCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSPCTYYISPTELPMAISSGR*VSRFSP Trigger: TGGAGAGAACCTGCTCACTCACCTTCCTGAGGAAAT...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAATGCATCTTTAAGAACTaGATAATGAACGAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CFKIISRMRLLWGWGSSQCIFKN*IMNEGP Trigger: AGGGCCTTCGTTCATTATTCAGTTCTTAAAGATGCA...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAATCTGCTGGGAGGGACTaGAATTTGTTACTGTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: CFKIISRMRLLWGWGSSQSAGRD*NLLLYK Trigger: TTTATACAGTAACAAATTGCAGTCCCTCCCAGCAGA...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR GCA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGAATTTCAGCAGGCAGCTaGTTGATTTTGTTCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRISAGS*LILFSR Trigger: CCGAGAGAACAAAATCAAGCAGCTGCCTGCTGAAAT...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCAGTAGGTCATTGTGCTaGAAGTCAAGGTTGGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: DTDTPEQTDGHGESRYKTSRSLC*KSRLVI Trigger: GATAACCAACCTTGACTTGCAGCACAATGACCTACT...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR GCA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGATCCAGTAGGTCATTGTaGTGCAAGTCAAGGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRSSRSL*CKSRLV Trigger: AACCAACCTTGACTTGCAGCACAATGACCTACTGGA...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR GCA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCGTCAAGACTAATTTCTaGAGATCCTTGAGATACGCG | + |
|
Preference number: 4 (lower is better) Translates to: DTDTPEQTDGHGESRYKTVKTNF*RSLRYA Trigger: CGCGTATCTCAAGGATCTGCAGAAATTAGTCTTGAC...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCATGCCTCTGGGAAGCGTaGTCAACTGGTTGTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSPCTYYISPTELPMACLWEA*STGCLS Trigger: TGACAAACAACCAGTTGAGCACGCTTCCCAGAGGCA...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGAACCAGACACATCCTCTaGGATCTTTGTGAGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRTRHIL*DLCELI Trigger: AATCAGCTCACAAAGATCCCAGAGGATGTGTCTGGT...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCGGAAGTGATGTTAACTaGTTGTCCTTCATATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DTDTPEQTDGHGESRYKTGSDVN*LSFIFS Trigger: GCTGAATATGAAGGACAATCAGTTAACATCACTTCC...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGCTCAATACTCATGATTaGCAGCTTGCTGCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLYGSCVSRLYLGCACSGLNTHD*QLAAES Trigger: GCTCTCTGCAGCAAGCTGTCAATCATGAGTATTGAG...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGAGTCAAGACTAATTTCTaGAGATCCTTGAGATACGCG | + |
|
Preference number: 4 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRVKTNF*RSLRYA Trigger: CGCGTATCTCAAGGATCTGCAGAAATTAGTCTTGAC...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CCA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCCCCACTGGATATAACTaGAAGCAATTTCTAGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DTDTPEQTDGHGESRYKTPTGYN*KQFLAK Trigger: CTTAGCTAGAAATTGCTTCCAGTTATATCCAGTGGG...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CCA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATCAATTCTACCATACTaGTCCAAGTTCCAAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCLDTDTPEQTDGHGESRSILPY*SKFQNP Trigger: TGGATTTTGGAACTTGGACCAGTATGGTAGAATTGA...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAATCAATTCTACCATACTaGTCCAAGTTCCAAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CFKIISRMRLLWGWGSSQSILPY*SKFQNP Trigger: TGGATTTTGGAACTTGGACCAGTATGGTAGAATTGA...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGCTGGATTTGGCCGTTTaGTGGTATTGTCGACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLYGSCVSRLYLGCACSGLDLAV*WYCRLK Trigger: TTTCAGTCGACAATACCATCAAACGGCCAAATCCAG...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR TCA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGGTTGAGTCAACTCTTTaGCTGATGGTGGCAGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: IVWKLCFKIISRMRLLWGVESTL*LMVAVY Trigger: ATATACTGCCACCATCAGTCAAAGAGTTGACTCAAC...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR TCA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCAGAAGATAGAGAGTGGTaGGAGAGTCTAGCCTATACA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSPCTYYISPTELPMAEDREW*ESLAYT Trigger: TGTATAGGCTAGACTCTCTCACCACTCTCTATCTTC...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGAGTTCTCAATACTCATaGTTGACAGCTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IVWKLCFKIISRMRLLWGSSQYS*LTACCR Trigger: TCTGCAGCAAGCTGTCAATCATGAGTATTGAGAACT...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGATCTCTCAGTTTATTATaGCGTAAATCAAGCATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRSLSLL*RKSSIR Trigger: GCGGATGCTTGATTTACGGCATAATAAACTGAGAGA...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCATCCAGTAGGTCATTGTaGTGCAAGTCAAGGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSPCTYYISPTELPMASSRSL*CKSRLV Trigger: AACCAACCTTGACTTGCAGCACAATGACCTACTGGA...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CCA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCGCTGCAAGTCAAGGTTaGTTATCTGTGTGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGHGESRYKTIVHCHLTAASQG*LSVCSF Trigger: GAAACTGCACACAGATAACCAACCTTGACTTGCAGC...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CCA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGCTGCAAGTCAAGGTTaGTTATCTGTGTGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLYGSCVSRLYLGCACSGAASQG*LSVCSF Trigger: GAAACTGCACACAGATAACCAACCTTGACTTGCAGC...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CCA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCCAAGGCGATTTAAACTaGACAGGTTTCCTATTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: DTDTPEQTDGHGESRYKTQGDLN*TGFLLY Trigger: ATACAATAGGAAACCTGTCCAGTTTAAATCGCCTTG...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CCA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCAACCAGACACATCCTCTaGGATCTTTGTGAGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSPCTYYISPTELPMATRHIL*DLCELI Trigger: AATCAGCTCACAAAGATCCCAGAGGATGTGTCTGGT...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGGGAAGCGTGCTCAACTaGTTGTTTGTCAAGACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: IVWKLCFKIISRMRLLWGGSVLN*LFVKTN Trigger: ATTAGTCTTGACAAACAACCAGTTGAGCACGCTTCC...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| 3UTR CAA 72 bp | TTTAGTTCAGCAGCAATACAGCACAGTGTGAAGATATaGTGCTTAGACACAGATACCCCCGAACAGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSSAAIQHSVKI*CLDTDTPEQTD Trigger: ATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGTATTGCTGCTGAACTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGAGTCAACTCTTTGACTaGTGGTGGCAGTATATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IVWKLCFKIISRMRLLWGSQLFD*WWQYMY Trigger: ATACATATACTGCCACCATCAGTCAAAGAGTTGACT...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR TCA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGGATTGTGTTCCATGTTaGGGGAATAAATGGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IVWKLCFKIISRMRLLWGDCVPC*GNKWWK Trigger: TTTCCACCATTTATTCCCTCAACATGGAACACAATC...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCAGTTCTCAATACTCATaGTTGACAGCTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TDGHGESRYKTIVHCHLTSSQYS*LTACCR Trigger: TCTGCAGCAAGCTGTCAATCATGAGTATTGAGAACT...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCAAGTTCTCAATACTCATaGTTGACAGCTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSPCTYYISPTELPMASSQYS*LTACCR Trigger: TCTGCAGCAAGCTGTCAATCATGAGTATTGAGAACT...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCAGTCAAGACTAATTTCTaGAGATCCTTGAGATACGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSKSPCTYYISPTELPMAVKTNF*RSLRYA Trigger: CGCGTATCTCAAGGATCTGCAGAAATTAGTCTTGAC...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGATCAATTCTACCATACTaGTCCAAGTTCCAAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRSILPY*SKFQNP Trigger: TGGATTTTGGAACTTGGACCAGTATGGTAGAATTGA...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CCA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCGGAAGCGTGCTCAACTaGTTGTTTGTCAAGACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TDGHGESRYKTIVHCHLTGSVLN*LFVKTN Trigger: ATTAGTCTTGACAAACAACCAGTTGAGCACGCTTCC...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCAGATTGTGTTCCATGTTaGGGGAATAAATGGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSPCTYYISPTELPMADCVPC*GNKWWK Trigger: TTTCCACCATTTATTCCCTCAACATGGAACACAATC...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGGATCTTTGTGAGCTaGTTAGTCGCTAAATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLYGSCVSRLYLGCACSGGIFVS*LVAKFN Trigger: ATTGAATTTAGCGACTAATCAGCTCACAAAGATCCC...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCGGGATCTTTGTGAGCTaGTTAGTCGCTAAATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TDGHGESRYKTIVHCHLTGIFVS*LVAKFN Trigger: ATTGAATTTAGCGACTAATCAGCTCACAAAGATCCC...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCTGCATCTTTAAGAACTaGATAATGAACGAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGHGESRYKTIVHCHLTCIFKN*IMNEGP Trigger: AGGGCCTTCGTTCATTATTCAGTTCTTAAAGATGCA...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR TCA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCATGCATCTTTAAGAACTaGATAATGAACGAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSPCTYYISPTELPMACIFKN*IMNEGP Trigger: AGGGCCTTCGTTCATTATTCAGTTCTTAAAGATGCA...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR GCA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCATCTGCTGGGAGGGACTaGAATTTGTTACTGTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSPCTYYISPTELPMASAGRD*NLLLYK Trigger: TTTATACAGTAACAAATTGCAGTCCCTCCCAGCAGA...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR GCA 90 bp | AAATGGGATTTTGTTGATTCGATTGTGTTCCATGTTGAGGGAATAAATGGTGGATCCAGTAGGTCATTGTaGTGCAAGTCAAGGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KWDFVDSIVFHVEGINGGSSRSL*CKSRLV Trigger: AACCAACCTTGACTTGCAGCACAATGACCTACTGGA...TCCACCATTTATTCCCTCAACATGGAACACAATCGAATCAACAAAATCCCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
||
| CDS-3UTR CCA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCCAAGGCGATTTAAACTaGACAGGTTTCCTATTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TDGHGESRYKTIVHCHLTQGDLN*TGFLLY Trigger: ATACAATAGGAAACCTGTCCAGTTTAAATCGCCTTG...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR GCA 90 bp | AAATGGGATTTTGTTGATTCGATTGTGTTCCATGTTGAGGGAATAAATGGTGGAAGTAGGTCATTGTGCTaGAAGTCAAGGTTGGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: KWDFVDSIVFHVEGINGGSRSLC*KSRLVI Trigger: GATAACCAACCTTGACTTGCAGCACAATGACCTACT...TCCACCATTTATTCCCTCAACATGGAACACAATCGAATCAACAAAATCCCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
||
| 3UTR CAA 72 bp | CCAATTATGAACACAGATTTGACCTCAAACCCAGTCTaGAGTTTGAGTGCCAGGAAAAGCAAAAATCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PIMNTDLTSNPV*SLSARKSKNPN Trigger: ATTTGGATTTTTGCTTTTCCTGGCACTCAAACTCAAGACTGGGTTTGAGGTCAAATCTGTGTTCATAATTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000237908.2 |
||
| 3UTR CAA 72 bp | ATGAACACAGATTTGACCTCAAACCCAGTCTTGAGTTaGAGTGCCAGGAAAAGCAAAAATCCAAATGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: MNTDLTSNPVLS*SARKSKNPNVY Trigger: ATAAACATTTGGATTTTTGCTTTTCCTGGCACTCAAACTCAAGACTGGGTTTGAGGTCAAATCTGTGTTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000237908.2 |
||
| CDS TCA 90 bp | TCTAGTGCCGGGTGCTGGATTTGGCCGTTTGATGGTATTGTCGACTaGAAAAGCCACACCTGGCTGGGCAGCGCTGGACTCCTTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSAGCWIWPFDGIVD*KSHTWLGSAGLLLS Trigger: GGAAAGAAGGAGTCCAGCGCTGCCCAGCCAGGTGTGGCTTTTTCAGTCGACAATACCATCAAACGGCCAAATCCAGCACCCGGCACTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGAGGCAAGGACTCCAGCTaGTTCTCCTCCAGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCLDTDTPEQTDGHGESRGKDSS*FSSRSS Trigger: GCTGGACCTGGAGGAGAACAAGCTGGAGTCCTTGCC...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | CCCGGGGATGGGGAAAGTGCATTTAGTTCAGCAGCAATACAGCACAGTGTGAAGGCCAGCGTCATGAGATaGACTAGACAGCCCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGDGESAFSSAAIQHSVKASVMR*TRQPTS Trigger: AGAGGTGGGCTGTCTAGTCAATCTCATGACGCTGGC...CTTCACACTGTGCTGTATTGCTGCTGAACTAAATGCACTTTCCCCATCCCCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS CCA 90 bp | TTTGGCCGTTTGATGGTATTGTCGACTGAAAAAGCCACACCTGGCTaGGCAGCGCTGGACTCCTTCTTTCCATCTTTGGCGTCTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FGRLMVLSTEKATPG*AALDSFFPSLASFP Trigger: AGGGAAAGACGCCAAAGATGGAAAGAAGGAGTCCAGCGCTGCCCAGCCAGGTGTGGCTTTTTCAGTCGACAATACCATCAAACGGCCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGAGCCAGCGTCATGAGATaGACTAGACAGCCCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCLDTDTPEQTDGHGESRASVMR*TRQPTS Trigger: AGAGGTGGGCTGTCTAGTCAATCTCATGACGCTGGC...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAACCCTCCAGCAACAATTaGAGGTGGGAGGTGACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CFKIISRMRLLWGWGSSQPSSNN*RWEVTE Trigger: CTCAGTCACCTCCCACCTCAAATTGTTGCTGGAGGG...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGTCAGCAGGCAGCTGCTaGATTTTGTTCTCTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LHKSHRTPNGINAMCRSPSAGSC*ILFSRM Trigger: CATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTGA...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | CCCGGGGATGGGGAAAGTGCATTTAGTTCAGCAGCAATACAGCACAGTGTGAAGAGGTCCAGTAGGTCATaGTGCTGCAAGTCAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGDGESAFSSAAIQHSVKRSSRS*CCKSRL Trigger: CAACCTTGACTTGCAGCACAATGACCTACTGGACCT...CTTCACACTGTGCTGTATTGCTGCTGAACTAAATGCACTTTCCCCATCCCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCCCCTCCAGCAACAATTaGAGGTGGGAGGTGACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DTDTPEQTDGHGESRYKTPSSNN*RWEVTE Trigger: CTCAGTCACCTCCCACCTCAAATTGTTGCTGGAGGG...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGTCCTTCTTTCCATCTTaGGCGTCTTTCCCTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHKSHRTPNGINAMCRSPSFFPS*ASFPLA Trigger: AGCCAAAGGGAAAGACGCCAAAGATGGAAAGAAGGA...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGTGGACAGGTTTCCTATaGTATCTGGGAGGTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LHKSHRTPNGINAMCRSPWTGFL*YLGGPV Trigger: TACTGGACCTCCCAGATACAATAGGAAACCTGTCCA...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCGGCAAGGACTCCAGCTaGTTCTCCTCCAGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TDGHGESRYKTIVHCHLTGKDSS*FSSRSS Trigger: GCTGGACCTGGAGGAGAACAAGCTGGAGTCCTTGCC...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS CCA 90 bp | ACAGCTTGCTGCAGAGAGCAAGCTCAAAGGGGAGGCTGTGAAGGTTaGGGTTGTCGTTCAAATACAGTTCTTCTAGGTTTTCCAGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TACCREQAQRGGCEG*GCRSNTVLLGFPVY Trigger: GTACACTGGAAAACCTAGAAGAACTGTATTTGAACGACAACCCCAACCTTCACAGCCTCCCCTTTGAGCTTGCTCTCTGCAGCAAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCTCCTTTTCTCTTTCCTaGGCAGACGGTACTTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DTDTPEQTDGHGESRYKTSFSLS*ADGTLG Trigger: CCCCAAAGTACCGTCTGCCAAGGAAAGAGAAAAGGA...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAAAGCCTCCTGAGGCTTTaGACTCCTTTTCTCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CFKIISRMRLLWGWGSSQSLLRL*TPFLFP Trigger: AGGAAAGAGAAAAGGAGTCAAAAGCCTCAGGAGGCT...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | CCCGGGGATGGGGAAAGTGCATTTAGTTCAGCAGCAATACAGCACAGTGTGAAGTTGGCGTCTTTCCCTTaGGCTTTAGGTTCCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGDGESAFSSAAIQHSVKLASFP*ALGSFS Trigger: AGAAAAGGAACCTAAAGCCAAAGGGAAAGACGCCAA...CTTCACACTGTGCTGTATTGCTGCTGAACTAAATGCACTTTCCCCATCCCCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCTCAGCAGGCAGCTGCTaGATTTTGTTCTCTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: DTDTPEQTDGHGESRYKTSAGSC*ILFSRM Trigger: CATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTGA...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS TCA 90 bp | TGGTGGCAGTATATGTATAGACCTCTTGGACAAGTCCAACCGCATTaGGTTCTCCTCCCGGCATTTGTTAAGCTCCTTAATGACCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WWQYMYRPLGQVQPH*VLLPAFVKLLNDLS Trigger: GCTGAGGTCATTAAGGAGCTTAACAAATGCCGGGAGGAGAACTCAATGCGGTTGGACTTGTCCAAGAGGTCTATACATATACTGCCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCTTGGCAGACGGTACTTaGGGGTCTTTCTCTTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DTDTPEQTDGHGESRYKTLADGT*GSFSLE Trigger: CTCTAAAGAGAAAGACCCCAAAGTACCGTCTGCCAA...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGTTAGGTTCCTTTTCTTaGCTCTCTTTCCCAAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHKSHRTPNGINAMCRSPLGSFS*LSFPKP Trigger: AGGCTTTGGGAAAGAGAGCAAAGAAAAGGAACCTAA...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAAAGCTTCGGCAGGTTTTaGATGTCCTTTTCCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CFKIISRMRLLWGWGSSQSFGRF*MSFSTV Trigger: TACTGTGGAAAAGGACATCAAAAACCTGCCGAAGCT...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGATCAGCAGGCAGCTGCTaGATTTTGTTCTCTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRSAGSC*ILFSRM Trigger: CATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTGA...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAATGCTGCAAGTCAAGGTaGGTTATCTGTGTGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CFKIISRMRLLWGWGSSQCCKSR*VICVQF Trigger: AAACTGCACACAGATAACCAACCTTGACTTGCAGCA...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCACCCTCCAGCAACAATTaGAGGTGGGAGGTGACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSKSPCTYYISPTELPMAPSSNN*RWEVTE Trigger: CTCAGTCACCTCCCACCTCAAATTGTTGCTGGAGGG...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | GACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGATATAAAACCAGCTTCGGCAGGTTTTaGATGTCCTTTTCCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: DTDTPEQTDGHGESRYKTSFGRF*MSFSTV Trigger: TACTGTGGAAAAGGACATCAAAAACCTGCCGAAGCT...GGTTTTATATCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | CCCGGGGATGGGGAAAGTGCATTTAGTTCAGCAGCAATACAGCACAGTGTGAAGCCAAATGGGATTTTGTaGATTCGATTGTGTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PGDGESAFSSAAIQHSVKPNGIL*IRLCSM Trigger: CATGGAACACAATCGAATCAACAAAATCCCATTTGG...CTTCACACTGTGCTGTATTGCTGCTGAACTAAATGCACTTTCCCCATCCCCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTTGGCAGACGGTACTTaGGGGTCTTTCTCTTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: IVWKLCFKIISRMRLLWGLADGT*GSFSLE Trigger: CTCTAAAGAGAAAGACCCCAAAGTACCGTCTGCCAA...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGTCCTTTTCTCTTTCCTaGGCAGACGGTACTTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLYGSCVSRLYLGCACSGSFSLS*ADGTLG Trigger: CCCCAAAGTACCGTCTGCCAAGGAAAGAGAAAAGGA...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGGGCCGTTTGATGGTATaGTCGACTGAAAAAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: IVWKLCFKIISRMRLLWGGRLMV*STEKAT Trigger: TGTGGCTTTTTCAGTCGACAATACCATCAAACGGCC...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGACAGGTTTCCTATaGTATCTGGGAGGTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IVWKLCFKIISRMRLLWGWTGFL*YLGGPV Trigger: TACTGGACCTCCCAGATACAATAGGAAACCTGTCCA...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | CTACATAAGTCCCACAGAACTCCCAATGGCATCAATGCCATGTGCCGTTCTCCGCTAATGATCTGGGTATaGCTGACAATCTATTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: LHKSHRTPNGINAMCRSPLMIWV*LTIYCI Trigger: GATACAATAGATTGTCAGCAATACCCAGATCATTAG...CGGAGAACGGCACATGGCATTGATGCCATTGGGAGTTCTGTGGGACTTATGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGACCAAATGGGATTTTGTaGATTCGATTGTGTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LCLDTDTPEQTDGHGESRPNGIL*IRLCSM Trigger: CATGGAACACAATCGAATCAACAAAATCCCATTTGG...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGAAGCTTCTTTAGAAGGTaGTTCGATAAGATCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: LCLDTDTPEQTDGHGESRSFFRR*FDKIRT Trigger: GGTTCTGATCTTATCGAACAACCTTCTAAAGAAGCT...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCATCCTTCTTTCCATCTTaGGCGTCTTTCCCTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSKSPCTYYISPTELPMASFFPS*ASFPLA Trigger: AGCCAAAGGGAAAGACGCCAAAGATGGAAAGAAGGA...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGCCGTTTGATGGTATaGTCGACTGAAAAAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SLYGSCVSRLYLGCACSGGRLMV*STEKAT Trigger: TGTGGCTTTTTCAGTCGACAATACCATCAAACGGCC...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | TGGTTGTTTGTCAAGACTAATTTCTGCAGATCCTTGAGATACGCGATCTCATTGAGGTCCAGTAGGTCATaGTGCTGCAAGTCAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WLFVKTNFCRSLRYAISLRSSRS*CCKSRL Trigger: CAACCTTGACTTGCAGCACAATGACCTACTGGACCT...CAATGAGATCGCGTATCTCAAGGATCTGCAGAAATTAGTCTTGACAAACAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237801.2 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGAATTTTGTTGATTCGATaGTGTTCCATGTTGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LCLDTDTPEQTDGHGESRILLIR*CSMLRE Trigger: TTCCCTCAACATGGAACACAATCGAATCAACAAAAT...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGTGGGGGAGTTCTCAAATTCCAAATGGGATTTaGTTGATTCGATTGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFKIISRMRLLWGWGSSQIPNGI*LIRLCS Trigger: GGAACACAATCGAATCAACAAAATCCCATTTGGAAT...TTGAGAACTCCCCCACCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTTAGACACAGATACCCCCGAACAGACAGATGGACATGGCGAGTCAAGAATTCCAAATGGGATTTaGTTGATTCGATTGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCLDTDTPEQTDGHGESRIPNGI*LIRLCS Trigger: GGAACACAATCGAATCAACAAAATCCCATTTGGAAT...TCTTGACTCGCCATGTCCATCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGAGCTTCGGCAGGTTTTaGATGTCCTTTTCCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SLYGSCVSRLYLGCACSGSFGRF*MSFSTV Trigger: TACTGTGGAAAAGGACATCAAAAACCTGCCGAAGCT...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCTGCTGCAAGTCAAGGTaGGTTATCTGTGTGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TDGHGESRYKTIVHCHLTCCKSR*VICVQF Trigger: AAACTGCACACAGATAACCAACCTTGACTTGCAGCA...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGACCAAATGGGATTTTGTaGATTCGATTGTGTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRPNGIL*IRLCSM Trigger: CATGGAACACAATCGAATCAACAAAATCCCATTTGG...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGAGCGTGCTCAACTGGTaGTTTGTCAAGACTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: IVWKLCFKIISRMRLLWGSVLNW*FVKTNF Trigger: GAAATTAGTCTTGACAAACAACCAGTTGAGCACGCT...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGTTAGGTTCCTTTTCTTaGCTCTCTTTCCCAAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLYGSCVSRLYLGCACSGLGSFS*LSFPKP Trigger: AGGCTTTGGGAAAGAGAGCAAAGAAAAGGAACCTAA...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | ACAGCACAGTGTGAAGATATTGTGCTTAGACACAGATACCCCCGAACAGACAGAATTTTGTTGATTCGATaGTGTTCCATGTTGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TAQCEDIVLRHRYPRTDRILLIR*CSMLRE Trigger: TTCCCTCAACATGGAACACAATCGAATCAACAAAAT...TCTGTCTGTTCGGGGGTATCTGTGTCTAAGCACAATATCTTCACACTGTGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCAGCGTGCTCAACTGGTaGTTTGTCAAGACTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: TDGHGESRYKTIVHCHLTSVLNW*FVKTNF Trigger: GAAATTAGTCTTGACAAACAACCAGTTGAGCACGCT...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCAAGCGTGCTCAACTGGTaGTTTGTCAAGACTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSKSPCTYYISPTELPMASVLNW*FVKTNF Trigger: GAAATTAGTCTTGACAAACAACCAGTTGAGCACGCT...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS GCA 90 bp | GAGTCTAGCCTATACACCACTGAAGGAATTTCTCTCAGTTTATTATaGCGTAAATCAAGCATCCGCAGCTTCTTCAAGTTATCAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ESSLYTTEGISLSLL*RKSSIRSFFKLSRE Trigger: CTCTCTTGATAACTTGAAGAAGCTGCGGATGCTTGATTTACGGCATAATAAACTGAGAGAAATTCCTTCAGTGGTGTATAGGCTAGACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
||
| CDS-3UTR CAA 90 bp | ATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGGGCTAATGATCTGGGTATaGCTGACAATCTATTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: IVWKLCFKIISRMRLLWGLMIWV*LTIYCI Trigger: GATACAATAGATTGTCAGCAATACCCAGATCATTAG...CCCCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
||
| CDS-3UTR CAA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCAGCTTCTTTAGAAGGTaGTTCGATAAGATCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: TDGHGESRYKTIVHCHLTSFFRR*FDKIRT Trigger: GGTTCTGATCTTATCGAACAACCTTCTAAAGAAGCT...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS-3UTR CAA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGTGCTCAACTGGTTGTTaGTCAAGACTAATTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SLYGSCVSRLYLGCACSGCSTGC*SRLISA Trigger: TGCAGAAATTAGTCTTGACAAACAACCAGTTGAGCA...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS-3UTR CAA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCATGCTCAACTGGTTGTTaGTCAAGACTAATTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: LSKSPCTYYISPTELPMACSTGC*SRLISA Trigger: TGCAGAAATTAGTCTTGACAAACAACCAGTTGAGCA...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS-3UTR CAA 90 bp | ACAGATGGACATGGCGAGTCAAGATATAAAACCATAGTACACTGTCACCTAACCTGCTCAACTGGTTGTTaGTCAAGACTAATTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: TDGHGESRYKTIVHCHLTCSTGC*SRLISA Trigger: TGCAGAAATTAGTCTTGACAAACAACCAGTTGAGCA...GGTTAGGTGACAGTGTACTATGGTTTTATATCTTGACTCGCCATGTCCATCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS-3UTR CAA 90 bp | TTATCAAAGAGTCCATGCACATACTACATAAGTCCCACAGAACTCCCAATGGCAATTTTGTTGATTCGATaGTGTTCCATGTTGAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: LSKSPCTYYISPTELPMAILLIR*CSMLRE Trigger: TTCCCTCAACATGGAACACAATCGAATCAACAAAAT...TGCCATTGGGAGTTCTGTGGGACTTATGTAGTATGTGCATGGACTCTTTGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS-3UTR CAA 90 bp | TCATTGTATGGAAGTTGTGTTTCAAGATTATATCTAGGATGCGCCTGCTCTGGGATTCCAAATGGGATTTaGTTGATTCGATTGTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: SLYGSCVSRLYLGCACSGIPNGI*LIRLCS Trigger: GGAACACAATCGAATCAACAAAATCCCATTTGGAAT...CCCAGAGCAGGCGCATCCTAGATATAATCTTGAAACACAACTTCCATACAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS CAA 72 bp | CTAGTGCCGGGTGCTGGATTTGGCCGTTTGATGGTATaGTCGACTGAAAAAGCCACACCTGGCTGGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: LVPGAGFGRLMV*STEKATPGWAA Trigger: CGCTGCCCAGCCAGGTGTGGCTTTTTCAGTCGACAATACCATCAAACGGCCAAATCCAGCACCCGGCACTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS CAA 72 bp | CCTGGCTGGGCAGCGCTGGACTCCTTCTTTCCATCTTaGGCGTCTTTCCCTTTGGCTTTAGGTTCCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PGWAALDSFFPS*ASFPLALGSFS Trigger: AGAAAAGGAACCTAAAGCCAAAGGGAAAGACGCCAAAGATGGAAAGAAGGAGTCCAGCGCTGCCCAGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS TCA 72 bp | TCTAGGTTTTCCAGTGTACCGATTTCCTCAGGAAGGTaGGTGAGCAGGTTCTCTCCAAGACCAAGGTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: SRFSSVPISSGR*VSRFSPRPRCV Trigger: CACGCACCTTGGTCTTGGAGAGAACCTGCTCACTCACCTTCCTGAGGAAATCGGTACACTGGAAAACCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS CAA 72 bp | GACAGGTTTCCAATTTCAGCAGGCAGCTGCTTGATTTaGTTCTCTCGGATGCTGAGCATGCTGAGCTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: DRFPISAGSCLI*FSRMLSMLSFG Trigger: GCCGAAGCTCAGCATGCTCAGCATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTGAAATTGGAAACCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237908.2 |
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| CDS CAA 90 bp | TGGGCAGCGCTGGACTCCTTCTTTCCATCTTTGGCGTCTTTCCCTTaGGCTTTAGGTTCCTTTTCTTTGCTCTCTTTCCCAAAGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: WAALDSFFPSLASFP*ALGSFSLLSFPKPP Trigger: AGGAGGCTTTGGGAAAGAGAGCAAAGAAAAGGAACCTAAAGCCAAAGGGAAAGACGCCAAAGATGGAAAGAAGGAGTCCAGCGCTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS CAA 90 bp | AGGCGATTTAAACTGGACAGGTTTCCAATTTCAGCAGGCAGCTGCTaGATTTTGTTCTCTCGGATGCTGAGCATGCTGAGCTTCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RRFKLDRFPISAGSC*ILFSRMLSMLSFGR Trigger: CCTGCCGAAGCTCAGCATGCTCAGCATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTGAAATTGGAAACCTGTCCAGTTTAAATCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237908.2 |
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| CDS TCA 72 bp | AGCTTGCTGCAGAGAGCAAGCTCAAAGGGGAGGCTGTaGAGGTTGGGGTTGTCGTTCAAATACAGTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SLLQRASSKGRL*RLGLSFKYSSS Trigger: AGAAGAACTGTATTTGAACGACAACCCCAACCTTCACAGCCTCCCCTTTGAGCTTGCTCTCTGCAGCAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS CAA 72 bp | GACAAGTCCAACCGCATTGAGTTCTCCTCCCGGCATTaGTTAAGCTCCTTAATGACCTCAGCATTGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: DKSNRIEFSSRH*LSSLMTSALLD Trigger: GTCCAGCAATGCTGAGGTCATTAAGGAGCTTAACAAATGCCGGGAGGAGAACTCAATGCGGTTGGACTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS CAA 72 bp | CATAATTCACCAATTTCAGCAGGCAGCTGCTTGATTTaGTTCTCTCGGATGCTGAGCATGCTGAGCTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: HNSPISAGSCLI*FSRMLSMLSFG Trigger: GCCGAAGCTCAGCATGCTCAGCATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTGAAATTGGTGAATTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS CAA 90 bp | TTTAAACTGGACAGGTTTCCAATTTCAGCAGGCAGCTGCTTGATTTaGTTCTCTCGGATGCTGAGCATGCTGAGCTTCGGCAGGTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: FKLDRFPISAGSCLI*FSRMLSMLSFGRFL Trigger: CAAAAACCTGCCGAAGCTCAGCATGCTCAGCATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTGAAATTGGAAACCTGTCCAGTTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237908.2 |
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| CDS CCA 72 bp | TGCAGAGAGCAAGCTCAAAGGGGAGGCTGTGAAGGTTaGGGTTGTCGTTCAAATACAGTTCTTCTAGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: CREQAQRGGCEG*GCRSNTVLLGF Trigger: AAAACCTAGAAGAACTGTATTTGAACGACAACCCCAACCTTCACAGCCTCCCCTTTGAGCTTGCTCTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS CAA 72 bp | GAACTGAATAATGAACGAAGGCCCTCCAGCAACAATTaGAGGTGGGAGGTGACTGAGTGGACAGTTCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: ELNNERRPSSNN*RWEVTEWTVLN Trigger: ATTGAGAACTGTCCACTCAGTCACCTCCCACCTCAAATTGTTGCTGGAGGGCCTTCGTTCATTATTCAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS CAA 90 bp | ATGAGGTTACATAATTCACCAATTTCAGCAGGCAGCTGCTTGATTTaGTTCTCTCGGATGCTGAGCATGCTGAGCTTCGGCAGGTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: MRLHNSPISAGSCLI*FSRMLSMLSFGRFL Trigger: CAAAAACCTGCCGAAGCTCAGCATGCTCAGCATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTGAAATTGGTGAATTATGTAACCTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS TCA 72 bp | CTTCAAGTTATCAAGAGAGTCAGGCAAACTGGTGAGTaGATTCTCACTGAGAGCCAGCGTCATGAGATTGAC | + |
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Preference number: 6 (lower is better) Translates to: LQVIKRVRQTGE*ILTESQRHEID Trigger: GTCAATCTCATGACGCTGGCTCTCAGTGAGAATTCACTCACCAGTTTGCCTGACTCTCTTGATAACTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS GCA 72 bp | TTTAAACTGGACAGGTTTCCAATTTCAGCAGGCAGCTaGTTGATTTTGTTCTCTCGGATGCTGAGCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: FKLDRFPISAGS*LILFSRMLSML Trigger: CAGCATGCTCAGCATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTGAAATTGGAAACCTGTCCAGTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237908.2 |
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| CDS CAA 72 bp | TCTCGGATGCTGAGCATGCTGAGCTTCGGCAGGTTTTaGATGTCCTTTTCCACAGTAGTTATGCGATTAAAG | + |
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Preference number: 6 (lower is better) Translates to: SRMLSMLSFGRF*MSFSTVVMRLK Trigger: CTTTAATCGCATAACTACTGTGGAAAAGGACATCAAAAACCTGCCGAAGCTCAGCATGCTCAGCATCCGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS GCA 72 bp | ATGAGGTTACATAATTCACCAATTTCAGCAGGCAGCTaGTTGATTTTGTTCTCTCGGATGCTGAGCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: MRLHNSPISAGS*LILFSRMLSML Trigger: CAGCATGCTCAGCATCCGAGAGAACAAAATCAAGCAGCTGCCTGCTGAAATTGGTGAATTATGTAACCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS TCA 72 bp | TATATGTATAGACCTCTTGGACAAGTCCAACCGCATTaGGTTCTCCTCCCGGCATTTGTTAAGCTCCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: YMYRPLGQVQPH*VLLPAFVKLLN Trigger: ATTAAGGAGCTTAACAAATGCCGGGAGGAGAACTCAATGCGGTTGGACTTGTCCAAGAGGTCTATACATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS CCA 72 bp | ACAATCTATTGTATCTCAGGCCAAGGCGATTTAAACTaGACAGGTTTCCTATTGTATCTGGGAGGTCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: TIYCISGQGDLN*TGFLLYLGGPV Trigger: TACTGGACCTCCCAGATACAATAGGAAACCTGTCCAGTTTAAATCGCCTTGGCCTGAGATACAATAGATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS CAA 72 bp | CATTTTGCTAATGATCTGGGTATTGCTGACAATCTATaGTATCTCAGGCCAAGGCGATTTAAACTGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: HFANDLGIADNL*YLRPRRFKLDR Trigger: CCTGTCCAGTTTAAATCGCCTTGGCCTGAGATACAATAGATTGTCAGCAATACCCAGATCATTAGCAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS CAA 90 bp | AGTGCACTGCATTTTGCTAATGATCTGGGTATTGCTGACAATCTATaGTATCTCAGGCCAAGGCGATTTAAACTGGACAGGTTTCCTATT | + |
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Preference number: 6 (lower is better) Translates to: SALHFANDLGIADNL*YLRPRRFKLDRFPI Trigger: AATAGGAAACCTGTCCAGTTTAAATCGCCTTGGCCTGAGATACAATAGATTGTCAGCAATACCCAGATCATTAGCAAAATGCAGTGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 |
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| CDS CAA 90 bp | AGTGCACTGCATTTTGCTAATGATCTGGGTATTGCTGACAATCTATaGTATCTCAGGCCAAGGCGATTTAAACTGGACAGGTTTCCAATT | + |
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Preference number: 6 (lower is better) Translates to: SALHFANDLGIADNL*YLRPRRFKLDRFPI Trigger: AATTGGAAACCTGTCCAGTTTAAATCGCCTTGGCCTGAGATACAATAGATTGTCAGCAATACCCAGATCATTAGCAAAATGCAGTGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237908.2 |
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| CDS GCA 72 bp | CTATACACCACTGAAGGAATTTCTCTCAGTTTATTATaGCGTAAATCAAGCATCCGCAGCTTCTTCAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: LYTTEGISLSLL*RKSSIRSFFKL Trigger: TAACTTGAAGAAGCTGCGGATGCTTGATTTACGGCATAATAAACTGAGAGAAATTCCTTCAGTGGTGTATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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| CDS CAA 72 bp | TGTTCTCTAAATTTAACTCCTCAAGTGCACTGCATTTaGCTAATGATCTGGGTATTGCTGACAATCTATTGT | + |
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Preference number: 6 (lower is better) Translates to: CSLNLTPQVHCI*LMIWVLLTIYC Trigger: ACAATAGATTGTCAGCAATACCCAGATCATTAGCAAAATGCAGTGCACTTGAGGAGTTAAATTTAGAGAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025932.9 ENSMUST00000169861.9 ENSMUST00000237908.2 |
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