Pregenerated sensors for SHMT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025403Ensembl transcript IDs: ENSMUST00000026470.6, ENSMUST00000219239.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAATCTCAGCTACAAATTCTGGAAGGGAGTTTATGCCTGGCTCTTaGCCTAAATGGAAGGCCTCCCTCCCTCCACTAAAACCCAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: EISATNSGREFMPGS*PKWKASLPPLKPRE Trigger: CTCTCTGGGTTTTAGTGGAGGGAGGGAGGCCTTCCATTTAGGGCAAGAGCCAGGCATAAACTCCCTTCCAGAATTTGTAGCTGAGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCCCAGCACTTGGGAAATaGAGGTGGAAGGGTCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: GEIHVEGVESLAGPGDPSPALGK*RWKGQF Trigger: GAACTGACCCTTCCACCTTCATTTCCCAAGTGCTGG...GGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCACTCACAGCTAAGTGAGACCCCCGTCTCAAAAACAAGTCGGATGTCAACTGGGTCTGTGGGCTTCTaGCCGACCGCCAGGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GHSQLSETPVSKTSRMSTGSVGF*PTARCP Trigger: AGGACACCTGGCGGTCGGTCAGAAGCCCACAGACCC...AGTTGACATCCGACTTGTTTTTGAGACGGGGGTCTCACTTAGCTGTGAGTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCTATAACCCCAGCACTTaGGAAATGAAGGTGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: GEIHVEGVESLAGPGDPSYNPST*EMKVEG Trigger: CCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATA...GGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCTCAGCTACAAATTCTaGAAGGGAGTTTATGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: VESLAGPGDPSHSNRNPGLSYKF*KGVYAW Trigger: CCAGGCATAAACTCCCTTCCAGAATTTGTAGCTGAG...CCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCAGCGATTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGTGGTGGGAGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTCTGGAAGGGAGTTTATaGCTGGCTCTTGCCCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: GGGGREGEIHVEGVESLALEGSL*LALALN Trigger: ATTTAGGGCAAGAGCCAGGCATAAACTCCCTTCCAG...AGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCTCCCACCACCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| 3UTR-3UTR CCA 90 bp | GTCATGGTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCACTCAGCTACAAATTCTaGAAGGGAGTTTATGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: VMVQTYNPSTWEMKVEGSLSYKF*KGVYAW Trigger: CCAGGCATAAACTCCCTTCCAGAATTTGTAGCTGAG...TGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCACCATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| 3UTR TCA 72 bp | TTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCTCTaGTCAGAGAGGAGGCTACAGCCCCGGGGGTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: FAAPANHVWCRL*SERRLQPRGSW Trigger: CCAGGACCCCCGGGGCTGTAGCCTCCTCTCTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| 3UTR TCA 72 bp | AAGGCCTCCCTCCCTCCACTAAAACCCAGAGAGGAGTaGCATCTCTTCTATGGTCCAGGGAGGCGGGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: KASLPPLKPREE*HLFYGPGRREE Trigger: TTCTTCCCGCCTCCCTGGACCATAGAAGAGATGTCACTCCTCTCTGGGTTTTAGTGGAGGGAGGGAGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| 3UTR CCA 72 bp | TCCACTAAAACCCAGAGAGGAGTGACATCTCTTCTATaGTCCAGGGAGGCGGGAAGAAAGGTAACTTCCGGG | + |
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Preference number: 3 (lower is better) Translates to: STKTQRGVTSLL*SREAGRKVTSG Trigger: CCCGGAAGTTACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGATGTCACTCCTCTCTGGGTTTTAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR GCA 90 bp | GTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGTGGGCCACCTTGCTGTaGTGGGCCCGGGCAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: VESLAGPGDPSHSNRNPGWATLL*WARAAM Trigger: CATGGCTGCCCGGGCCCAGCACAGCAAGGTGGCCCA...CCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCAGCGATTCTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCGCCACCTTGCTGTGCTaGGCCCGGGCAGCCATGCAG | + |
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Preference number: 4 (lower is better) Translates to: GEIHVEGVESLAGPGDPSATLLC*ARAAMQ Trigger: CTGCATGGCTGCCCGGGCCCAGCACAGCAAGGTGGC...GGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR GCA 90 bp | GGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTTGGGCCACCTTGCTGTaGTGGGCCCGGGCAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: GVESLAGPGDPSHSNRNPWATLL*WARAAM Trigger: CATGGCTGCCCGGGCCCAGCACAGCAAGGTGGCCCA...AGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR GCA 90 bp | ACGTCTGGTGTCGGCTCTGATCAGAGAGGAGGCTACAGCCCCGGGGGTCCTGGTGATGTGGGCCATGTCTaGCAGCAGGTGTGCCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: TSGVGSDQRGGYSPGGPGDVGHV*QQVCPD Trigger: GTCAGGGCACACCTGCTGGCAGACATGGCCCACATC...ACCAGGACCCCCGGGGCTGTAGCCTCCTCTCTGATCAGAGCCGACACCAGACGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCCGGCTACTGCAGCAATaGCGTGGTTGTGGGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GEIHVEGVESLAGPGDPSRLLQQ*RGCGGH Trigger: GTGGCCCCCACAACCACGCCATTGCTGCAGTAGCCG...GGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCATTTCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LAQGTPPTVIGTLGRLAFLHPGP*AAGPPA Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...AAATGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR TCA 90 bp | GGTGGTGGTGGGAGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGGTGCAGGCCTGCTTaGGAGCCACGGCTACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GGGGREGEIHVEGVESLAGCRPA*EPRLLQ Trigger: CTGCAGTAGCCGTGGCTCTCAAGCAGGCCTGCACCC...AGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCTCCCACCACCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR GCA 90 bp | GAAATGAAGGTGGAAGGGTCAGTTCAAGGCCACTCACAGCTAAGTGAGACCCCCGCGTCTGGGCCACCTTaGTGTGCTGGGCCCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EMKVEGSVQGHSQLSETPASGPP*CAGPGQ Trigger: CTGCCCGGGCCCAGCACAGCAAGGTGGCCCAGACGC...GGGGGTCTCACTTAGCTGTGAGTGGCCTTGAACTGACCCTTCCACCTTCATTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR GCA 90 bp | TGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCAGTCTGCCAGCAGGTGTaGCCTGACCTCATCACAGAC | + |
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Preference number: 4 (lower is better) Translates to: WLAQGTPPTVIGTLGRLAVCQQV*PDLITD Trigger: GTCTGTGATGAGGTCAGGGCACACCTGCTGGCAGAC...TGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR GCA 90 bp | TGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCAATAGGGGTGCAGGCCTaGTTGAGAGCCACGGCTACT | + |
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Preference number: 4 (lower is better) Translates to: WLAQGTPPTVIGTLGRLAIGVQA*LRATAT Trigger: AGTAGCCGTGGCTCTCAAGCAGGCCTGCACCCCTAT...TGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | AGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACGCAGGGCATCAGCCATaGCCTGGGCGTTCCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: REGEIHVEGVESLAGPGDAGHQP*PGRSSA Trigger: TGCTGAGGAACGCCCAGGCCATGGCTGATGCCCTGC...GTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR TCA 90 bp | CTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCATTTGCCATGCAGACCAGCTaGCCACATCTCTGCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LAQGTPPTVIGTLGRLAFAMQTS*PHLCRG Trigger: GCCTCTGCAGAGATGTGGTCAGCTGGTCTGCATGGC...AAATGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026470.6 |
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| CDS-3UTR TCA 90 bp | CTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCATTTGTAGAAGATGAGCCCTaGCCTGGCCCCTCGCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: LAQGTPPTVIGTLGRLAFVEDEP*PGPSQC Trigger: ACACTGCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...AAATGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR GCA 90 bp | CTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCATTTCCAGGTGGGTGTCAGTaGCACCAGACACCAGCGAGT | + |
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Preference number: 4 (lower is better) Translates to: LAQGTPPTVIGTLGRLAFPGGCQ*HQTPAS Trigger: ACTCGCTGGTGTCTGGTGGCACTGACACCCACCTGG...AAATGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR GCA 90 bp | TGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCAAACTGTTCCACCTGTTaGCGGAGGTTGGCCAAACGC | + |
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Preference number: 4 (lower is better) Translates to: WLAQGTPPTVIGTLGRLANCSTC*RRLAKR Trigger: GCGTTTGGCCAACCTCCGGCAACAGGTGGAACAGTT...TGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | AGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACGCAATGGCGTGGTTGTaGGGGCCACCCTGTAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: REGEIHVEGVESLAGPGDAMAWL*GPPCRD Trigger: ATCCCTACAGGGTGGCCCCCACAACCACGCCATTGC...GTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | ATCACGTCTGGTGTCGGCTCTGATCAGAGAGGAGGCTACAGCCCCGGGGGTCCTGCATGGGGAAGCCCCTaGCAAACTGTTCCACCTGTT | + |
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Preference number: 4 (lower is better) Translates to: ITSGVGSDQRGGYSPGGPAWGSP*QTVPPV Trigger: AACAGGTGGAACAGTTTGCCAGGGGCTTCCCCATGC...AGGACCCCCGGGGCTGTAGCCTCCTCTCTGATCAGAGCCGACACCAGACGTGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR TCA 90 bp | GGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTAGTATGGCTGCACATTaGCTCCCCACTGTGCCGGAT | + |
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Preference number: 4 (lower is better) Translates to: GVESLAGPGDPSHSNRNPSMAAH*LPTVPD Trigger: ATCCGGCACAGTGGGGAGTCAATGTGCAGCCATACT...AGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR TCA 90 bp | GGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTATTGGCTGGGGACCCTaGGTATGGCTGCACATTGAC | + |
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Preference number: 4 (lower is better) Translates to: GVESLAGPGDPSHSNRNPIGWGP*VWLHID Trigger: GTCAATGTGCAGCCATACTCAGGGTCCCCAGCCAAT...AGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR TCA 90 bp | GGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCTGGCGGAGATCCGCTTaGCATCAGACATGTAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GEIHVEGVESLAGPGDPSWRRSA*HQTCSH Trigger: ATGGCTACATGTCTGATGTCAAGCGGATCTCCGCCA...GGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR TCA 90 bp | TGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCACCTCGCAGTGTCTTGTaGGTGGTGGTGGTAACAACA | + |
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Preference number: 4 (lower is better) Translates to: WLAQGTPPTVIGTLGRLAPRSVL*VVVVTT Trigger: TGTTGTTACCACCACCACTCACAAGACACTGCGAGG...TGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR GCA 90 bp | GGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCCTGTCCTTCTCCCTCTaGAGAAGCTCCCACATCTCA | + |
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Preference number: 4 (lower is better) Translates to: GEIHVEGVESLAGPGDPSLSFSL*RSSHIS Trigger: TGAGATGTGGGAGCTTCTGCAGAGGGAGAAGGACAG...GGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | TGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCATCTGATAAACTCTCCTaGCCCGTCCAACCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: WLAQGTPPTVIGTLGRLASDKLS*PVQPPA Trigger: AGCTGGAGGTTGGACGGGCCAGGAGAGTTTATCAGA...TGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | AACCCAGAGAGGAGTGACATCTCTTCTATGGTCCAGGGAGGCGGGAAGAAAGGTTCCAAGGCCCGGCGCTaGCAGAGCAGCTCGATCTCG | + |
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Preference number: 4 (lower is better) Translates to: NPERSDISSMVQGGGKKGSKARR*QSSSIS Trigger: CGAGATCGAGCTGCTCTGCCAGCGCCGGGCCTTGGA...ACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGATGTCACTCCTCTCTGGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | GGTGGTGGTGGGAGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGCAATGGCGTGGTTGTaGGGGCCACCCTGTAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: GGGGREGEIHVEGVESLAAMAWL*GPPCRD Trigger: ATCCCTACAGGGTGGCCCCCACAACCACGCCATTGC...AGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCTCCCACCACCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | GGTGGTGGTGGGAGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTTCCACCAGCACCAGGTaGGTGTCAGTGCCACCAGAC | + |
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Preference number: 4 (lower is better) Translates to: GGGGREGEIHVEGVESLASTSTR*VSVPPD Trigger: GTCTGGTGGCACTGACACCCACCTGGTGCTGGTGGA...AGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCTCCCACCACCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | AACCCAGAGAGGAGTGACATCTCTTCTATGGTCCAGGGAGGCGGGAAGAAAGGTCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NPERSDISSMVQGGGKKGLHPGP*AAGPPA Trigger: TGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAG...ACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGATGTCACTCCTCTCTGGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | ATCACGTCTGGTGTCGGCTCTGATCAGAGAGGAGGCTACAGCCCCGGGGGTCCTAGGTTGGCCAAACGCTaGCTTGTCTCTGGGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: ITSGVGSDQRGGYSPGGPRLAKR*LVSGSL Trigger: CAAAGACCCAGAGACAAGCCAGCGTTTGGCCAACCT...AGGACCCCCGGGGCTGTAGCCTCCTCTCTGATCAGAGCCGACACCAGACGTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR TCA 90 bp | AGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACAGTATGGCTGCACATTaGCTCCCCACTGTGCCGGAT | + |
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Preference number: 4 (lower is better) Translates to: REGEIHVEGVESLAGPGDSMAAH*LPTVPD Trigger: ATCCGGCACAGTGGGGAGTCAATGTGCAGCCATACT...GTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR GCA 90 bp | CTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCATTTATTGACTCCCCACTGTaGCGGATCCAGGTCAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LAQGTPPTVIGTLGRLAFIDSPL*RIQVKG Trigger: GCCTTTGACCTGGATCCGGCACAGTGGGGAGTCAAT...AAATGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR GCA 90 bp | GGTGGTGGTGGGAGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTATAGGGGTGCAGGCCTaGTTGAGAGCCACGGCTACT | + |
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Preference number: 4 (lower is better) Translates to: GGGGREGEIHVEGVESLAIGVQA*LRATAT Trigger: AGTAGCCGTGGCTCTCAAGCAGGCCTGCACCCCTAT...AGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCTCCCACCACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | GAAATGAAGGTGGAAGGGTCAGTTCAAGGCCACTCACAGCTAAGTGAGACCCCCCGGCTACTGCAGCAATaGCGTGGTTGTGGGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: EMKVEGSVQGHSQLSETPRLLQQ*RGCGGH Trigger: GTGGCCCCCACAACCACGCCATTGCTGCAGTAGCCG...GGGGGTCTCACTTAGCTGTGAGTGGCCTTGAACTGACCCTTCCACCTTCATTTC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | GCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCATTCATCAAATCCAGGCATaGGGAAGCCCCTGGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: AGPGDPSHSNRNPGQVSIHQIQA*GSPWQT Trigger: AGTTTGCCAGGGGCTTCCCCATGCCTGGATTTGATG...AATGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR TCA 90 bp | CTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCATTTTGGCGGAGATCCGCTTaGCATCAGACATGTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LAQGTPPTVIGTLGRLAFWRRSA*HQTCSH Trigger: ATGGCTACATGTCTGATGTCAAGCGGATCTCCGCCA...AAATGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCTTCTATGGTCCAGGGAGGCGGGAAGAAAGGTAACTTCCGGGTCTGTGGGGTCTGCCAGCAGGTGTaGCCTGACCTCATCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ISSMVQGGGKKGNFRVCGVCQQV*PDLITD Trigger: GTCTGTGATGAGGTCAGGGCACACCTGCTGGCAGAC...CCCACAGACCCGGAAGTTACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | GAAATGAAGGTGGAAGGGTCAGTTCAAGGCCACTCACAGCTAAGTGAGACCCCCCCAGGTGGGTGTCAGTaGCACCAGACACCAGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EMKVEGSVQGHSQLSETPPGGCQ*HQTPAS Trigger: ACTCGCTGGTGTCTGGTGGCACTGACACCCACCTGG...GGGGGTCTCACTTAGCTGTGAGTGGCCTTGAACTGACCCTTCCACCTTCATTTC 57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CCA 90 bp | AACCCAGAGAGGAGTGACATCTCTTCTATGGTCCAGGGAGGCGGGAAGAAAGGTACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPERSDISSMVQGGGKKGTRPLM*AMSASR Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...ACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGATGTCACTCCTCTCTGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CCA 90 bp | GAAATGAAGGTGGAAGGGTCAGTTCAAGGCCACTCACAGCTAAGTGAGACCCCCACCAGGCCACTGATGTaGGCCATGTCTGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EMKVEGSVQGHSQLSETPTRPLM*AMSASR Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGT...GGGGGTCTCACTTAGCTGTGAGTGGCCTTGAACTGACCCTTCCACCTTCATTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CCA 90 bp | GGCCACTCACAGCTAAGTGAGACCCCCGTCTCAAAAACAAGTCGGATGTCAACTGCAGGGCATCAGCCATaGCCTGGGCGTTCCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GHSQLSETPVSKTSRMSTAGHQP*PGRSSA Trigger: TGCTGAGGAACGCCCAGGCCATGGCTGATGCCCTGC...AGTTGACATCCGACTTGTTTTTGAGACGGGGGTCTCACTTAGCTGTGAGTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CCA 90 bp | GAAATGAAGGTGGAAGGGTCAGTTCAAGGCCACTCACAGCTAAGTGAGACCCCCTCCACCAGCACCAGGTaGGTGTCAGTGCCACCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EMKVEGSVQGHSQLSETPSTSTR*VSVPPD Trigger: GTCTGGTGGCACTGACACCCACCTGGTGCTGGTGGA...GGGGGTCTCACTTAGCTGTGAGTGGCCTTGAACTGACCCTTCCACCTTCATTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCATTTCATCAAATCCAGGCATaGGGAAGCCCCTGGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LAQGTPPTVIGTLGRLAFHQIQA*GSPWQT Trigger: AGTTTGCCAGGGGCTTCCCCATGCCTGGATTTGATG...AAATGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | AGTGACATCTCTTCTATGGTCCAGGGAGGCGGGAAGAAAGGTAACTTCCGGGTCCCGAGTACTTGTTGTTaGGACAGGACCCCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDISSMVQGGGKKGNFRVPSTCC*DRTPGP Trigger: AGGCCCTGGGGTCCTGTCTCAACAACAAGTACTCGG...GACCCGGAAGTTACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGATGTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTTGTTCTTGTTGGCTGTaGTGGAGACGAGTTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GVESLAGPGDPSHSNRNPCSCWL*WRRVPT Trigger: TGTTGGAACTCGTCTCCATCACAGCCAACAAGAACA...AGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTGCTGCTTCCCCAGCCTaGGTCTGGGCCACCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MVQTYNPSTWEMKVEGSVAASPA*VWATLL Trigger: CAGCAAGGTGGCCCAGACGCAGGCTGGGGAAGCAGC...AACTGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCTTCTATGGTCCAGGGAGGCGGGAAGAAAGGTAACTTCCGGGTCTGTGGGGACCTCTCTCATGCGTaGATAGTCAATGAGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISSMVQGGGKKGNFRVCGDLSHA*IVNEAG Trigger: GCCCGCCTCATTGACTATGCACGCATGAGAGAGGTC...CCCACAGACCCGGAAGTTACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | ATGGTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTCCTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MVQTYNPSTWEMKVEGSVPSGRR*ALTWPL Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAGG...AACTGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | AAGATCAGAAATCTCAGCTACAAATTCTGGAAGGGAGTTTATGCCTGGCTCTTGGCGTCTGGGCCACCTTaGTGTGCTGGGCCCGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KIRNLSYKFWKGVYAWLLASGPP*CAGPGQ Trigger: CTGCCCGGGCCCAGCACAGCAAGGTGGCCCAGACGC...CAAGAGCCAGGCATAAACTCCCTTCCAGAATTTGTAGCTGAGATTTCTGATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | AGTGACATCTCTTCTATGGTCCAGGGAGGCGGGAAGAAAGGTAACTTCCGGGTCATTGACTCCCCACTGTaGCGGATCCAGGTCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDISSMVQGGGKKGNFRVIDSPL*RIQVKG Trigger: GCCTTTGACCTGGATCCGGCACAGTGGGGAGTCAAT...GACCCGGAAGTTACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGATGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CCA 90 bp | AGTGACATCTCTTCTATGGTCCAGGGAGGCGGGAAGAAAGGTAACTTCCGGGTCGCATGGGGAAGCCCCTaGCAAACTGTTCCACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SDISSMVQGGGKKGNFRVAWGSP*QTVPPV Trigger: AACAGGTGGAACAGTTTGCCAGGGGCTTCCCCATGC...GACCCGGAAGTTACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGATGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | AGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTCAAGGCCACTCACAGCTAAGTCCGAGTACTTGTTGTTaGGACAGGACCCCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: STWEMKVEGSVQGHSQLSPSTCC*DRTPGP Trigger: AGGCCCTGGGGTCCTGTCTCAACAACAAGTACTCGG...ACTTAGCTGTGAGTGGCCTTGAACTGACCCTTCCACCTTCATTTCCCAAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | GTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTCAACCAGCAGGTGTGCCCTaGCCTCATCACAGACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQTYNPSTWEMKVEGSVQPAGVP*PHHRPL Trigger: GAGAGGTCTGTGATGAGGTCAGGGCACACCTGCTGG...TTGAACTGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | AACCCAGAGAGGAGTGACATCTCTTCTATGGTCCAGGGAGGCGGGAAGAAAGGTCCTCGCAGTGTCTTGTaGGTGGTGGTGGTAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: NPERSDISSMVQGGGKKGPRSVL*VVVVTT Trigger: TGTTGTTACCACCACCACTCACAAGACACTGCGAGG...ACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGATGTCACTCCTCTCTGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | ATGGTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTGTAGAAGATGAGCCCTaGCCTGGCCCCTCGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MVQTYNPSTWEMKVEGSVVEDEP*PGPSQC Trigger: ACACTGCGAGGGGCCAGGTCAGGGCTCATCTTCTAC...AACTGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGTGGTGGGAGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGAACACAGCGAAGTTaGTTCGGTCCTCAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GGGGREGEIHVEGVESLAGTQRS*FGPQRY Trigger: ATACCTTTGAGGACCGAATCAACTTCGCTGTGTTCC...AGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCTCCCACCACCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | GTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTCAACCAGCGCAGCTCGGCTaGAGAAGTTCTCTGAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VQTYNPSTWEMKVEGSVQPAQLG*RSSLRR Trigger: TCGCCTCAGAGAACTTCTGCAGCCGAGCTGCGCTGG...TTGAACTGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTCCAGCGCAGCTCGGCTaGAGAAGTTCTCTGAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: MVQTYNPSTWEMKVEGSVPAQLG*RSSLRR Trigger: TCGCCTCAGAGAACTTCTGCAGCCGAGCTGCGCTGG...AACTGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR GCA 90 bp | ATGGTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTGATGTGGGCCATGTCTaGCAGCAGGTGTGCCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MVQTYNPSTWEMKVEGSVDVGHV*QQVCPD Trigger: GTCAGGGCACACCTGCTGGCAGACATGGCCCACATC...AACTGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | AAGATCAGAAATCTCAGCTACAAATTCTGGAAGGGAGTTTATGCCTGGCTCTTGGCCACCTTGCTGTGCTaGGCCCGGGCAGCCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KIRNLSYKFWKGVYAWLLATLLC*ARAAMQ Trigger: CTGCATGGCTGCCCGGGCCCAGCACAGCAAGGTGGC...CAAGAGCCAGGCATAAACTCCCTTCCAGAATTTGTAGCTGAGATTTCTGATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | AGTGACATCTCTTCTATGGTCCAGGGAGGCGGGAAGAAAGGTAACTTCCGGGTCTCTGATAAACTCTCCTaGCCCGTCCAACCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SDISSMVQGGGKKGNFRVSDKLS*PVQPPA Trigger: AGCTGGAGGTTGGACGGGCCAGGAGAGTTTATCAGA...GACCCGGAAGTTACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGATGTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGGTGGGAGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGGREGEIHVEGVESLAKDLKS*SLAVLR Trigger: GCGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...AGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCTCCCACCACCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CCA 90 bp | GAAATGAAGGTGGAAGGGTCAGTTCAAGGCCACTCACAGCTAAGTGAGACCCCCAGGTTGGCCAAACGCTaGCTTGTCTCTGGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EMKVEGSVQGHSQLSETPRLAKR*LVSGSL Trigger: CAAAGACCCAGAGACAAGCCAGCGTTTGGCCAACCT...GGGGGTCTCACTTAGCTGTGAGTGGCCTTGAACTGACCCTTCCACCTTCATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | GGCCACTCACAGCTAAGTGAGACCCCCGTCTCAAAAACAAGTCGGATGTCAACTCTGTCCTTCTCCCTCTaGAGAAGCTCCCACATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHSQLSETPVSKTSRMSTLSFSL*RSSHIS Trigger: TGAGATGTGGGAGCTTCTGCAGAGGGAGAAGGACAG...AGTTGACATCCGACTTGTTTTTGAGACGGGGGTCTCACTTAGCTGTGAGTGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CCA 90 bp | GGCCACTCACAGCTAAGTGAGACCCCCGTCTCAAAAACAAGTCGGATGTCAACTTATAGGCAGCCAGATTaGCTGGGGACCCTGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: GHSQLSETPVSKTSRMSTYRQPD*LGTLSM Trigger: CATACTCAGGGTCCCCAGCCAATCTGGCTGCCTATA...AGTTGACATCCGACTTGTTTTTGAGACGGGGGTCTCACTTAGCTGTGAGTGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | AAGATCAGAAATCTCAGCTACAAATTCTGGAAGGGAGTTTATGCCTGGCTCTTGCGTCCAACCTCCAGCTaGTTCCCCAGCCTGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KIRNLSYKFWKGVYAWLLRPTSS*FPSLRL Trigger: CAGACGCAGGCTGGGGAAGCAGCTGGAGGTTGGACG...CAAGAGCCAGGCATAAACTCCCTTCCAGAATTTGTAGCTGAGATTTCTGATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | GTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTCAAGACCTCTCTCATGCGTaGATAGTCAATGAGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQTYNPSTWEMKVEGSVQDLSHA*IVNEAG Trigger: GCCCGCCTCATTGACTATGCACGCATGAGAGAGGTC...TTGAACTGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CCA 90 bp | AGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTCAAGGCCACTCACAGCTAAGTTATAGGCAGCCAGATTaGCTGGGGACCCTGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: STWEMKVEGSVQGHSQLSYRQPD*LGTLSM Trigger: CATACTCAGGGTCCCCAGCCAATCTGGCTGCCTATA...ACTTAGCTGTGAGTGGCCTTGAACTGACCCTTCCACCTTCATTTCCCAAGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | AGTAATAGGAACCCTGGGCAGGTTAGCATTTTATTAGATAAAAACAGGAAGGAGGGGTGCAGGCCTGCTTaGGAGCCACGGCTACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNRNPGQVSILLDKNRKEGCRPA*EPRLLQ Trigger: CTGCAGTAGCCGTGGCTCTCAAGCAGGCCTGCACCC...CTCCTTCCTGTTTTTATCTAATAAAATGCTAACCTGCCCAGGGTTCCTATTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | AGTAATAGGAACCCTGGGCAGGTTAGCATTTTATTAGATAAAAACAGGAAGGAGCCTTCCGGTAGAAGATaGGCCCTGACCTGGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNRNPGQVSILLDKNRKEPSGRR*ALTWPL Trigger: GAGGGGCCAGGTCAGGGCTCATCTTCTACCGGAAGG...CTCCTTCCTGTTTTTATCTAATAAAATGCTAACCTGCCCAGGGTTCCTATTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | GTCATGGTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCATGTTCTTGTTGGCTGTaGTGGAGACGAGTTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VMVQTYNPSTWEMKVEGSCSCWL*WRRVPT Trigger: TGTTGGAACTCGTCTCCATCACAGCCAACAAGAACA...TGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCACCATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | AGTAATAGGAACCCTGGGCAGGTTAGCATTTTATTAGATAAAAACAGGAAGGAGCCAGCAGGTGTGCCCTaGCCTCATCACAGACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNRNPGQVSILLDKNRKEPAGVP*PHHRPL Trigger: GAGAGGTCTGTGATGAGGTCAGGGCACACCTGCTGG...CTCCTTCCTGTTTTTATCTAATAAAATGCTAACCTGCCCAGGGTTCCTATTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | AAGATCAGAAATCTCAGCTACAAATTCTGGAAGGGAGTTTATGCCTGGCTCTTGGGAGCTTGGCAGTCTTaGGCTTCACCTCCAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KIRNLSYKFWKGVYAWLLGAWQS*ASPPSQ Trigger: TTGGCTTGGAGGTGAAGCGCAAGACTGCCAAGCTCC...CAAGAGCCAGGCATAAACTCCCTTCCAGAATTTGTAGCTGAGATTTCTGATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: MVQTYNPSTWEMKVEGSVKDLKS*SLAVLR Trigger: GCGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTT...AACTGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | AAGATCAGAAATCTCAGCTACAAATTCTGGAAGGGAGTTTATGCCTGGCTCTTGGACCCTGAGTATGGCTaGACATTGACTCCCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KIRNLSYKFWKGVYAWLLDPEYG*TLTPHC Trigger: ACAGTGGGGAGTCAATGTGCAGCCATACTCAGGGTC...CAAGAGCCAGGCATAAACTCCCTTCCAGAATTTGTAGCTGAGATTTCTGATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | AGTAATAGGAACCCTGGGCAGGTTAGCATTTTATTAGATAAAAACAGGAAGGAGATTGGCTGGGGACCCTaGGTATGGCTGCACATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SNRNPGQVSILLDKNRKEIGWGP*VWLHID Trigger: GTCAATGTGCAGCCATACTCAGGGTCCCCAGCCAAT...CTCCTTCCTGTTTTTATCTAATAAAATGCTAACCTGCCCAGGGTTCCTATTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR TCA 90 bp | AAGATCAGAAATCTCAGCTACAAATTCTGGAAGGGAGTTTATGCCTGGCTCTTGGGAACACAGCGAAGTTaGTTCGGTCCTCAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KIRNLSYKFWKGVYAWLLGTQRS*FGPQRY Trigger: ATACCTTTGAGGACCGAATCAACTTCGCTGTGTTCC...CAAGAGCCAGGCATAAACTCCCTTCCAGAATTTGTAGCTGAGATTTCTGATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR GCA 90 bp | AGTAATAGGAACCCTGGGCAGGTTAGCATTTTATTAGATAAAAACAGGAAGGAGGACCCTGAGTATGGCTaGACATTGACTCCCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNRNPGQVSILLDKNRKEDPEYG*TLTPHC Trigger: ACAGTGGGGAGTCAATGTGCAGCCATACTCAGGGTC...CTCCTTCCTGTTTTTATCTAATAAAATGCTAACCTGCCCAGGGTTCCTATTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS CCA 90 bp | CTCTCCTGGCCCGTCCAACCTCCAGCTGCTTCCCCAGCCTGCGTCTaGGCCACCTTGCTGTGCTGGGCCCGGGCAGCCATGCAGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSWPVQPPAASPACV*ATLLCWARAAMQTS Trigger: GCTGGTCTGCATGGCTGCCCGGGCCCAGCACAGCAAGGTGGCCCAGACGCAGGCTGGGGAAGCAGCTGGAGGTTGGACGGGCCAGGAGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS GCA 90 bp | CCGTCCAACCTCCAGCTGCTTCCCCAGCCTGCGTCTGGGCCACCTTaGTGTGCTGGGCCCGGGCAGCCATGCAGACCAGCTGACCACATC | + |
|
Preference number: 5 (lower is better) Translates to: PSNLQLLPQPASGPP*CAGPGQPCRPADHI Trigger: GATGTGGTCAGCTGGTCTGCATGGCTGCCCGGGCCCAGCACAGCAAGGTGGCCCAGACGCAGGCTGGGGAAGCAGCTGGAGGTTGGACGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS GCA 90 bp | CAGCCTGCGTCTGGGCCACCTTGCTGTGCTGGGCCCGGGCAGCCATaGAGACCAGCTGACCACATCTCTGCAGAGGCCGAGTGGTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: QPASGPPCCAGPGQP*RPADHISAEAEWSE Trigger: TTCGGACCACTCGGCCTCTGCAGAGATGTGGTCAGCTGGTCTGCATGGCTGCCCGGGCCCAGCACAGCAAGGTGGCCCAGACGCAGGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026470.6 |
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| CDS CCA 90 bp | CGGGCTCCATCCAGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTaGGTGTCAGTGCCACCAGACACCAGCGAGTATCCTCGCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAPSRPLGRRSTSTR*VSVPPDTSEYPRLS Trigger: GCTCAAGCGAGGATACTCGCTGGTGTCTGGTGGCACTGACACCCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CCA 90 bp | AGACGAGTTCCAACACGCGTTCGGCTCGGGCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCACCAGGTGGGTGTCAGTGCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRVPTRVRLGLHPGP*AAGPPAPGGCQCHQ Trigger: CTGGTGGCACTGACACCCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCCCGAGCCGAACGCGTGTTGGAACTCGTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS GCA 90 bp | CAGCCTGCGTCTGGGCCACCTTGCTGTGCTGGGCCCGGGCAGCCATaGAGACCAGCTGACCACATCTCCGAGTGGTCCGAAGCAAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QPASGPPCCAGPGQP*RPADHISEWSEAKR Trigger: TCTCTTTGCTTCGGACCACTCGGAGATGTGGTCAGCTGGTCTGCATGGCTGCCCGGGCCCAGCACAGCAAGGTGGCCCAGACGCAGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219239.2 |
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| CDS TCA 90 bp | TGGGCCACCTTGCTGTGCTGGGCCCGGGCAGCCATGCAGACCAGCTaGCCACATCTCTGCAGAGGCCGAGTGGTCCGAAGCAAAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WATLLCWARAAMQTS*PHLCRGRVVRSKEK Trigger: CTTCTCTTTGCTTCGGACCACTCGGCCTCTGCAGAGATGTGGTCAGCTGGTCTGCATGGCTGCCCGGGCCCAGCACAGCAAGGTGGCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026470.6 |
||
| CDS TCA 90 bp | AGGCTGCAGAAGGGCCGTATAGGCAGCCAGATTGGCTGGGGACCCTaGGTATGGCTGCACATTGACTCCCCACTGTGCCGGATCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RLQKGRIGSQIGWGP*VWLHIDSPLCRIQV Trigger: GACCTGGATCCGGCACAGTGGGGAGTCAATGTGCAGCCATACTCAGGGTCCCCAGCCAATCTGGCTGCCTATACGGCCCTTCTGCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS TCA 90 bp | CCAGGTGGGTGTCAGTGCCACCAGACACCAGCGAGTATCCTCGCTTaGGCAGGGCATCAGCCATGGCCTGGGCGTTCCTCAGCACTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PGGCQCHQTPASILA*AGHQPWPGRSSALV Trigger: TACAAGTGCTGAGGAACGCCCAGGCCATGGCTGATGCCCTGCTCAAGCGAGGATACTCGCTGGTGTCTGGTGGCACTGACACCCACCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CCA 90 bp | TGCAGAAGCTCCCACATCTCAGGGTCACTGTCTGATAAACTCTCCTaGCCCGTCCAACCTCCAGCTGCTTCCCCAGCCTGCGTCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CRSSHISGSLSDKLS*PVQPPAASPACVWA Trigger: GGCCCAGACGCAGGCTGGGGAAGCAGCTGGAGGTTGGACGGGCCAGGAGAGTTTATCAGACAGTGACCCTGAGATGTGGGAGCTTCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CAA 90 bp | GGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCTCCGAGTACTTGTTGTaGAGACAGGACCCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GEIHVEGVESLAGPGDPSSEYLL*RQDPRA Trigger: GGCCCTGGGGTCCTGTCTCAACAACAAGTACTCGGA...GGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | TGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCACCCTCCGAGTACTTGTaGTTGAGACAGGACCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WLAQGTPPTVIGTLGRLAPSEYL*LRQDPR Trigger: CCTGGGGTCCTGTCTCAACAACAAGTACTCGGAGGG...TGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | TGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCAGAGTATGGCTGCACATaGACTCCCCACTGTGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: WLAQGTPPTVIGTLGRLAEYGCT*TPHCAG Trigger: TCCGGCACAGTGGGGAGTCAATGTGCAGCCATACTC...TGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CAA 90 bp | ACGTCTGGTGTCGGCTCTGATCAGAGAGGAGGCTACAGCCCCGGGGGTCCTGGTCCAGGACAGGTGTTCTaGTTGGCTGTGATGGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: TSGVGSDQRGGYSPGGPGPGQVF*LAVMET Trigger: CGTCTCCATCACAGCCAACAAGAACACCTGTCCTGG...ACCAGGACCCCCGGGGCTGTAGCCTCCTCTCTGATCAGAGCCGACACCAGACGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCATTTCCGAGTACTTGTTGTaGAGACAGGACCCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGPGDPSHSNRNPGQVSISEYLL*RQDPRA Trigger: GGCCCTGGGGTCCTGTCTCAACAACAAGTACTCGGA...AATGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | GTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCCAGGACAGGTGTTCTaGTTGGCTGTGATGGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: VESLAGPGDPSHSNRNPGPGQVF*LAVMET Trigger: CGTCTCCATCACAGCCAACAAGAACACCTGTCCTGG...CCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCAGCGATTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CAA 90 bp | GTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGAAACTGTTCCACCTGTaGCCGGAGGTTGGCCAAACG | + |
|
Preference number: 5 (lower is better) Translates to: VESLAGPGDPSHSNRNPGKLFHL*PEVGQT Trigger: CGTTTGGCCAACCTCCGGCAACAGGTGGAACAGTTT...CCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCAGCGATTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS TCA 90 bp | TATAGGCAGCCAGATTGGCTGGGGACCCTGAGTATGGCTGCACATTaGCTCCCCACTGTGCCGGATCCAGGTCAAAGGCTTCCAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YRQPDWLGTLSMAAH*LPTVPDPGQRLPRP Trigger: GGGCCTTGGAAGCCTTTGACCTGGATCCGGCACAGTGGGGAGTCAATGTGCAGCCATACTCAGGGTCCCCAGCCAATCTGGCTGCCTATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS GCA 90 bp | GGCAGCCACCAGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTaGCCTGACCTCATCACAGACCTCTCTCATGCGTGCATAGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GSHQATDVGHVCQQV*PDLITDLSHACIVN Trigger: ATTGACTATGCACGCATGAGAGAGGTCTGTGATGAGGTCAGGGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGTGGCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CCA 90 bp | GACACCAGCGAGTATCCTCGCTTGAGCAGGGCATCAGCCATGGCCTaGGCGTTCCTCAGCACTTGTAAGGAGTACTCGCGGAACATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DTSEYPRLSRASAMA*AFLSTCKEYSRNIG Trigger: CCCTATGTTCCGCGAGTACTCCTTACAAGTGCTGAGGAACGCCCAGGCCATGGCTGATGCCCTGCTCAAGCGAGGATACTCGCTGGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | GGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCTTGAAATCCTGGAGCTaGGCAGTCTTGCGCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GEIHVEGVESLAGPGDPSLKSWS*AVLRFT Trigger: GGTGAAGCGCAAGACTGCCAAGCTCCAGGATTTCAA...GGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | TGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCATTGAAATCCTGGAGCTaGGCAGTCTTGCGCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: WLAQGTPPTVIGTLGRLALKSWS*AVLRFT Trigger: GGTGAAGCGCAAGACTGCCAAGCTCCAGGATTTCAA...TGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS GCA 90 bp | GAGGCGATGAGCTCCAGGCCGCGACACTGTCTGTCCTTCTCCCTCTaGAGAAGCTCCCACATCTCAGGGTCACTGTCTGATAAACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EAMSSRPRHCLSFSL*RSSHISGSLSDKLS Trigger: GGAGAGTTTATCAGACAGTGACCCTGAGATGTGGGAGCTTCTGCAGAGGGAGAAGGACAGACAGTGTCGCGGCCTGGAGCTCATCGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS GCA 90 bp | TCAAATCCAGGCATGGGGAAGCCCCTGGCAAACTGTTCCACCTGTTaGCGGAGGTTGGCCAAACGCTGGCTTGTCTCTGGGTCTTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNPGMGKPLANCSTC*RRLAKRWLVSGSLS Trigger: GCTCAAAGACCCAGAGACAAGCCAGCGTTTGGCCAACCTCCGGCAACAGGTGGAACAGTTTGCCAGGGGCTTCCCCATGCCTGGATTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | AGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACACAACATCCGCGTACTaGAAAGGGGAGGGGATCACC | + |
|
Preference number: 5 (lower is better) Translates to: REGEIHVEGVESLAGPGDTTSAY*KGEGIT Trigger: GGTGATCCCCTCCCCTTTCAAGTACGCGGATGTTGT...GTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | GGTGGTGGTGGGAGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTACAACATCCGCGTACTaGAAAGGGGAGGGGATCACC | + |
|
Preference number: 5 (lower is better) Translates to: GGGGREGEIHVEGVESLATTSAY*KGEGIT Trigger: GGTGATCCCCTCCCCTTTCAAGTACGCGGATGTTGT...AGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCTCCCACCACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | ATCTCTTCTATGGTCCAGGGAGGCGGGAAGAAAGGTAACTTCCGGGTCTGTGGGAGCGAGTATCCTCGCTaGAGCAGGGCATCAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ISSMVQGGGKKGNFRVCGSEYPR*SRASAM Trigger: CATGGCTGATGCCCTGCTCAAGCGAGGATACTCGCT...CCCACAGACCCGGAAGTTACCTTTCTTCCCGCCTCCCTGGACCATAGAAGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CCA 90 bp | CCCCTGGCAAACTGTTCCACCTGTTGCCGGAGGTTGGCCAAACGCTaGCTTGTCTCTGGGTCTTTGAGCAGGAAGGATTTGAAATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLANCSTCCRRLAKR*LVSGSLSRKDLKSW Trigger: CCAGGATTTCAAATCCTTCCTGCTCAAAGACCCAGAGACAAGCCAGCGTTTGGCCAACCTCCGGCAACAGGTGGAACAGTTTGCCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | CTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTGGGCAGGTTAGCATTTGGGAACACAGCGAAGTaGATTCGGTCCTCAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LAQGTPPTVIGTLGRLAFGNTAK*IRSSKV Trigger: TACCTTTGAGGACCGAATCAACTTCGCTGTGTTCCC...AAATGCTAACCTGCCCAGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | GAAATGAAGGTGGAAGGGTCAGTTCAAGGCCACTCACAGCTAAGTGAGACCCCCAGCGAGTATCCTCGCTaGAGCAGGGCATCAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: EMKVEGSVQGHSQLSETPSEYPR*SRASAM Trigger: CATGGCTGATGCCCTGCTCAAGCGAGGATACTCGCT...GGGGGTCTCACTTAGCTGTGAGTGGCCTTGAACTGACCCTTCCACCTTCATTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CCA 90 bp | CTGTTCCACCTGTTGCCGGAGGTTGGCCAAACGCTGGCTTGTCTCTaGGTCTTTGAGCAGGAAGGATTTGAAATCCTGGAGCTTGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LFHLLPEVGQTLACL*VFEQEGFEILELGS Trigger: ACTGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTCAAAGACCCAGAGACAAGCCAGCGTTTGGCCAACCTCCGGCAACAGGTGGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | AGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTGGCCCAGGGGACTTGAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: REGEIHVEGVESLAGPGDLSRKD*KSWSLA Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTCAA...GTCCCCTGGGCCAGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | GGAGTAGAATCGCTGGCTGGCCCAGGGGACCCCTCCCACAGTAATAGGAACCCTCTTGTCTCTGGGTCTTaGAGCAGGAAGGATTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GVESLAGPGDPSHSNRNPLVSGS*SRKDLK Trigger: TTTCAAATCCTTCCTGCTCAAAGACCCAGAGACAAG...AGGGTTCCTATTACTGTGGGAGGGGTCCCCTGGGCCAGCCAGCGATTCTACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | AGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTCAAGGCCACTCACAGCTAAGTTGGAGCTTGGCAGTCTaGCGCTTCACCTCCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: STWEMKVEGSVQGHSQLSWSLAV*RFTSKP Trigger: TGGCTTGGAGGTGAAGCGCAAGACTGCCAAGCTCCA...ACTTAGCTGTGAGTGGCCTTGAACTGACCCTTCCACCTTCATTTCCCAAGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGGTGGGAGGGAAGGAGAGATACACGTTGAGGGAGTAGAATCGCTGGCTTTGAGCAGGAAGGATTaGAAATCCTGGAGCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGGGREGEIHVEGVESLALSRKD*KSWSLA Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTCAA...AGCCAGCGATTCTACTCCCTCAACGTGTATCTCTCCTTCCCTCCCACCACCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS-3UTR CAA 90 bp | ATGGTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTGAGTATGGCTGCACATaGACTCCCCACTGTGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: MVQTYNPSTWEMKVEGSVEYGCT*TPHCAG Trigger: TCCGGCACAGTGGGGAGTCAATGTGCAGCCATACTC...AACTGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCAGTTTGGAGCTTGGCAGTCTaGCGCTTCACCTCCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MVQTYNPSTWEMKVEGSVWSLAV*RFTSKP Trigger: TGGCTTGGAGGTGAAGCGCAAGACTGCCAAGCTCCA...AACTGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CAA 90 bp | GTCATGGTGCAAACCTATAACCCCAGCACTTGGGAAATGAAGGTGGAAGGGTCAAAACTGTTCCACCTGTaGCCGGAGGTTGGCCAAACG | + |
|
Preference number: 5 (lower is better) Translates to: VMVQTYNPSTWEMKVEGSKLFHL*PEVGQT Trigger: CGTTTGGCCAACCTCCGGCAACAGGTGGAACAGTTT...TGACCCTTCCACCTTCATTTCCCAAGTGCTGGGGTTATAGGTTTGCACCATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CAA 90 bp | AAGATCAGAAATCTCAGCTACAAATTCTGGAAGGGAGTTTATGCCTGGCTCTTGGGGAACACAGCGAAGTaGATTCGGTCCTCAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KIRNLSYKFWKGVYAWLLGNTAK*IRSSKV Trigger: TACCTTTGAGGACCGAATCAACTTCGCTGTGTTCCC...CAAGAGCCAGGCATAAACTCCCTTCCAGAATTTGTAGCTGAGATTTCTGATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCATTTAACAAATTGAATTTGCTGCGCCTGCTAATCACGTCTGGTGTCGGCCTTGTCTCTGGGTCTTaGAGCAGGAAGGATTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ISFNKLNLLRLLITSGVGLVSGS*SRKDLK Trigger: TTTCAAATCCTTCCTGCTCAAAGACCCAGAGACAAG...GCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATTTGTTAAATGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219239.2 |
||
| CDS CCA 72 bp | CCAACACGCGTTCGGCTCGGGCTCCATCCAGGCCCTTaGGCCGCAGGTCCACCAGCACCAGGTGGGTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PTRVRLGLHPGP*AAGPPAPGGCQ Trigger: CTGACACCCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCCCGAGCCGAACGCGTGTTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS CAA 72 bp | TCCAACACGCGTTCGGCTCGGGCTCCATCCAGGCCCTaGGGCCGCAGGTCCACCAGCACCAGGTGGGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SNTRSARAPSRP*GRRSTSTRWVS Trigger: TGACACCCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCCCGAGCCGAACGCGTGTTGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS CAA 90 bp | GAGACGAGTTCCAACACGCGTTCGGCTCGGGCTCCATCCAGGCCCTaGGGCCGCAGGTCCACCAGCACCAGGTGGGTGTCAGTGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: ETSSNTRSARAPSRP*GRRSTSTRWVSVPP Trigger: TGGTGGCACTGACACCCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGATGGAGCCCGAGCCGAACGCGTGTTGGAACTCGTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
||
| CDS GCA 72 bp | TCTGGGCCACCTTGCTGTGCTGGGCCCGGGCAGCCATaGAGACCAGCTGACCACATCTCTGCAGAGGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGPPCCAGPGQP*RPADHISAEAE Trigger: CTCGGCCTCTGCAGAGATGTGGTCAGCTGGTCTGCATGGCTGCCCGGGCCCAGCACAGCAAGGTGGCCCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026470.6 |
||
| CDS TCA 72 bp | TTGCTGTGCTGGGCCCGGGCAGCCATGCAGACCAGCTaGCCACATCTCTGCAGAGGCCGAGTGGTCCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLCWARAAMQTS*PHLCRGRVVRS Trigger: GCTTCGGACCACTCGGCCTCTGCAGAGATGTGGTCAGCTGGTCTGCATGGCTGCCCGGGCCCAGCACAGCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026470.6 |
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| CDS GCA 72 bp | TCTGGGCCACCTTGCTGTGCTGGGCCCGGGCAGCCATaGAGACCAGCTGACCACATCTCCGAGTGGTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: SGPPCCAGPGQP*RPADHISEWSE Trigger: TTCGGACCACTCGGAGATGTGGTCAGCTGGTCTGCATGGCTGCCCGGGCCCAGCACAGCAAGGTGGCCCAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219239.2 |
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| CDS CCA 72 bp | GCCGGATCCAGGTCAAAGGCTTCCAAGGCCCGGCGCTaGCAGAGCAGCTCGATCTCGTCCACCACTTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: AGSRSKASKARR*QSSSISSTTSA Trigger: AGCGGAAGTGGTGGACGAGATCGAGCTGCTCTGCCAGCGCCGGGCCTTGGAAGCCTTTGACCTGGATCCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CCA 72 bp | TCCAGGCCCTTGGGCCGCAGGTCCACCAGCACCAGGTaGGTGTCAGTGCCACCAGACACCAGCGAGTATCCT | + |
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Preference number: 6 (lower is better) Translates to: SRPLGRRSTSTR*VSVPPDTSEYP Trigger: AGGATACTCGCTGGTGTCTGGTGGCACTGACACCCACCTGGTGCTGGTGGACCTGCGGCCCAAGGGCCTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CAA 72 bp | GTGTCAGTGCCACCAGACACCAGCGAGTATCCTCGCTaGAGCAGGGCATCAGCCATGGCCTGGGCGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VSVPPDTSEYPR*SRASAMAWAFL Trigger: GAGGAACGCCCAGGCCATGGCTGATGCCCTGCTCAAGCGAGGATACTCGCTGGTGTCTGGTGGCACTGACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS TCA 72 bp | AAGGGCCGTATAGGCAGCCAGATTGGCTGGGGACCCTaGGTATGGCTGCACATTGACTCCCCACTGTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: KGRIGSQIGWGP*VWLHIDSPLCR Trigger: CCGGCACAGTGGGGAGTCAATGTGCAGCCATACTCAGGGTCCCCAGCCAATCTGGCTGCCTATACGGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS TCA 72 bp | TGTCAGTGCCACCAGACACCAGCGAGTATCCTCGCTTaGGCAGGGCATCAGCCATGGCCTGGGCGTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: CQCHQTPASILA*AGHQPWPGRSS Trigger: TGAGGAACGCCCAGGCCATGGCTGATGCCCTGCTCAAGCGAGGATACTCGCTGGTGTCTGGTGGCACTGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS TCA 72 bp | CGCTCCGGTCTCCAGGACAGGTGTTCTTGTTGGCTGTaGTGGAGACGAGTTCCAACACGCGTTCGGCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: RSGLQDRCSCWL*WRRVPTRVRLG Trigger: CCCGAGCCGAACGCGTGTTGGAACTCGTCTCCATCACAGCCAACAAGAACACCTGTCCTGGAGACCGGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS TCA 72 bp | TTGCTGTGCTGGGCCCGGGCAGCCATGCAGACCAGCTaGCCACATCTCCGAGTGGTCCGAAGCAAAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLCWARAAMQTS*PHLRVVRSKEK Trigger: CTTCTCTTTGCTTCGGACCACTCGGAGATGTGGTCAGCTGGTCTGCATGGCTGCCCGGGCCCAGCACAGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219239.2 |
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| CDS GCA 72 bp | CAGGCCACTGATGTGGGCCATGTCTGCCAGCAGGTGTaGCCTGACCTCATCACAGACCTCTCTCATGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: QATDVGHVCQQV*PDLITDLSHAC Trigger: GCACGCATGAGAGAGGTCTGTGATGAGGTCAGGGCACACCTGCTGGCAGACATGGCCCACATCAGTGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CCA 72 bp | AAATCGACGACTCTACGGAAGTCGTCCTCACGGAACTaGCGAGAGGTCAACGCGGGGGCCCCAAGCCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: KSTTLRKSSSRN*REVNAGAPSLK Trigger: CTTGAGGCTTGGGGCCCCCGCGTTGACCTCTCGCCAGTTCCGTGAGGACGACTTCCGTAGAGTCGTCGATTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CAA 72 bp | AGGCATGGGGAAGCCCCTGGCAAACTGTTCCACCTGTaGCCGGAGGTTGGCCAAACGCTGGCTTGTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RHGEAPGKLFHL*PEVGQTLACLW Trigger: CCAGAGACAAGCCAGCGTTTGGCCAACCTCCGGCAACAGGTGGAACAGTTTGCCAGGGGCTTCCCCATGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CAA 90 bp | GTGGTGGTAACAACATCCGCGTACTTGAAAGGGGAGGGGATCACCTaGGCAGCCACCAGGCCACTGATGTGGGCCATGTCTGCCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VVVTTSAYLKGEGIT*AATRPLMWAMSASR Trigger: CCTGCTGGCAGACATGGCCCACATCAGTGGCCTGGTGGCTGCCAAGGTGATCCCCTCCCCTTTCAAGTACGCGGATGTTGTTACCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CCA 72 bp | TCCCACATCTCAGGGTCACTGTCTGATAAACTCTCCTaGCCCGTCCAACCTCCAGCTGCTTCCCCAGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SHISGSLSDKLS*PVQPPAASPAC Trigger: GCAGGCTGGGGAAGCAGCTGGAGGTTGGACGGGCCAGGAGAGTTTATCAGACAGTGACCCTGAGATGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CCA 72 bp | GAGTATCCTCGCTTGAGCAGGGCATCAGCCATGGCCTaGGCGTTCCTCAGCACTTGTAAGGAGTACTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: EYPRLSRASAMA*AFLSTCKEYSR Trigger: CCGCGAGTACTCCTTACAAGTGCTGAGGAACGCCCAGGCCATGGCTGATGCCCTGCTCAAGCGAGGATACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CAA 72 bp | GCCAGATTGGCTGGGGACCCTGAGTATGGCTGCACATaGACTCCCCACTGTGCCGGATCCAGGTCAAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: ARLAGDPEYGCT*TPHCAGSRSKA Trigger: AGCCTTTGACCTGGATCCGGCACAGTGGGGAGTCAATGTGCAGCCATACTCAGGGTCCCCAGCCAATCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CAA 90 bp | GGCATGGGGAAGCCCCTGGCAAACTGTTCCACCTGTTGCCGGAGGTaGGCCAAACGCTGGCTTGTCTCTGGGTCTTTGAGCAGGAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: GMGKPLANCSTCCRR*AKRWLVSGSLSRKD Trigger: ATCCTTCCTGCTCAAAGACCCAGAGACAAGCCAGCGTTTGGCCAACCTCCGGCAACAGGTGGAACAGTTTGCCAGGGGCTTCCCCATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS TCA 72 bp | CCAGATTGGCTGGGGACCCTGAGTATGGCTGCACATTaGCTCCCCACTGTGCCGGATCCAGGTCAAAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: PDWLGTLSMAAH*LPTVPDPGQRL Trigger: AAGCCTTTGACCTGGATCCGGCACAGTGGGGAGTCAATGTGCAGCCATACTCAGGGTCCCCAGCCAATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CAA 72 bp | ACAACATCCGCGTACTTGAAAGGGGAGGGGATCACCTaGGCAGCCACCAGGCCACTGATGTGGGCCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: TTSAYLKGEGIT*AATRPLMWAMS Trigger: AGACATGGCCCACATCAGTGGCCTGGTGGCTGCCAAGGTGATCCCCTCCCCTTTCAAGTACGCGGATGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CAA 72 bp | AAGCCCCTGGCAAACTGTTCCACCTGTTGCCGGAGGTaGGCCAAACGCTGGCTTGTCTCTGGGTCTTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: KPLANCSTCCRR*AKRWLVSGSLS Trigger: GCTCAAAGACCCAGAGACAAGCCAGCGTTTGGCCAACCTCCGGCAACAGGTGGAACAGTTTGCCAGGGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CAA 90 bp | ATCAAATCCAGGCATGGGGAAGCCCCTGGCAAACTGTTCCACCTGTaGCCGGAGGTTGGCCAAACGCTGGCTTGTCTCTGGGTCTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: IKSRHGEAPGKLFHL*PEVGQTLACLWVFE Trigger: CTCAAAGACCCAGAGACAAGCCAGCGTTTGGCCAACCTCCGGCAACAGGTGGAACAGTTTGCCAGGGGCTTCCCCATGCCTGGATTTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CAA 72 bp | GGAGTAATGGCGCTCCGGTCTCCAGGACAGGTGTTCTaGTTGGCTGTGATGGAGACGAGTTCCAACACGCGT | + |
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Preference number: 6 (lower is better) Translates to: GVMALRSPGQVF*LAVMETSSNTR Trigger: ACGCGTGTTGGAACTCGTCTCCATCACAGCCAACAAGAACACCTGTCCTGGAGACCGGAGCGCCATTACTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CAA 90 bp | ACCTGTTGCCGGAGGTTGGCCAAACGCTGGCTTGTCTCTGGGTCTTaGAGCAGGAAGGATTTGAAATCCTGGAGCTTGGCAGTCTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: TCCRRLAKRWLVSGS*SRKDLKSWSLAVLR Trigger: GCGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTCAAAGACCCAGAGACAAGCCAGCGTTTGGCCAACCTCCGGCAACAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS TCA 72 bp | GGGGGCCACCCTGTAGGGATGGGAACACAGCGAAGTTaGTTCGGTCCTCAAAGGTATAAGGGATCTCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: GGHPVGMGTQRS*FGPQRYKGSLC Trigger: GCAAAGAGATCCCTTATACCTTTGAGGACCGAATCAACTTCGCTGTGTTCCCATCCCTACAGGGTGGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CCA 72 bp | AACTGTTCCACCTGTTGCCGGAGGTTGGCCAAACGCTaGCTTGTCTCTGGGTCTTTGAGCAGGAAGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: NCSTCCRRLAKR*LVSGSLSRKDL Trigger: CAAATCCTTCCTGCTCAAAGACCCAGAGACAAGCCAGCGTTTGGCCAACCTCCGGCAACAGGTGGAACAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CAA 72 bp | CGGAGGTTGGCCAAACGCTGGCTTGTCTCTGGGTCTTaGAGCAGGAAGGATTTGAAATCCTGGAGCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: RRLAKRWLVSGS*SRKDLKSWSLA Trigger: TGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTCAAAGACCCAGAGACAAGCCAGCGTTTGGCCAACCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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| CDS CCA 72 bp | GTCTCTGGGTCTTTGAGCAGGAAGGATTTGAAATCCTaGAGCTTGGCAGTCTTGCGCTTCACCTCCAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VSGSLSRKDLKS*SLAVLRFTSKP Trigger: TGGCTTGGAGGTGAAGCGCAAGACTGCCAAGCTCCAGGATTTCAAATCCTTCCTGCTCAAAGACCCAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026470.6 ENSMUST00000219239.2 |
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