Pregenerated sensors for SHLD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041471Ensembl transcript IDs: ENSMUST00000111917.3, ENSMUST00000227006.2, ENSMUST00000227375.2, ENSMUST00000228337.2, ENSMUST00000228626.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGAACAAAGAGGGGTCCTAAAGCCCGAGGAAGCACAACACACATaGTACAGCAGGTCAGTCACACCCAGGGAAGATAAGTGGCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: TEQRGVLKPEEAQHT*YSRSVTPREDKWQR Trigger: CCTTTGCCACTTATCTTCCCTGGGTGTGACTGACCTGCTGTAGCATGTGTGTTGTGCTTCCTCGGGCTTTAGGACCCCTCTTTGTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| 3UTR CCA 90 bp | TCTATTACTCTAGTCTCGGGATCTAACACCCTCTCCTGGCCTCTGTaGGTGCCAGGTACATACATGGTACACAGACATACACAGGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: SITLVSGSNTLSWPL*VPGTYMVHRHTQAK Trigger: TTTTGCCTGTGTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATCCCGAGACTAGAGTAATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| 3UTR CCA 90 bp | TCACAACCATCTATTACTCTAGTCTCGGGATCTAACACCCTCTCCTaGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGACATACA | + |
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Preference number: 1 (lower is better) Translates to: SQPSITLVSGSNTLS*PLWVPGTYMVHRHT Trigger: TGTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATCCCGAGACTAGAGTAATAGATGGTTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| 3UTR TCA 90 bp | ATGATTACAACCAACCAAGGCAGGCTTCTTAGAGGAGAAAATGGATaGGAAGGCATCACAGAACAAAGAGGGGTCCTAAAGCCCGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: MITTNQGRLLRGENG*EGITEQRGVLKPEE Trigger: TTCCTCGGGCTTTAGGACCCCTCTTTGTTCTGTGATGCCTTCTCATCCATTTTCTCCTCTAAGAAGCCTGCCTTGGTTGGTTGTAATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| 3UTR CCA 90 bp | GGCAGCATAAAGGAGCCCAGTGATAGAACTTCAACTGACACACGATaGATGATTACAACCAACCAAGGCAGGCTTCTTAGAGGAGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: GSIKEPSDRTSTDTR*MITTNQGRLLRGEN Trigger: ATTTTCTCCTCTAAGAAGCCTGCCTTGGTTGGTTGTAATCATCCATCGTGTGTCAGTTGAAGTTCTATCACTGGGCTCCTTTATGCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGCCTTCAACTCCAGAACCTCTTGGCCCTGCCTCTTAAGTGCTGGGATTACAAGAGGAGAAAATGGATaGGAAGGCATCACAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: LAFNSRTSWPCLLSAGITRGENG*EGITEQ Trigger: TTGTTCTGTGATGCCTTCTCATCCATTTTCTCCTCT...TGTAATCCCAGCACTTAAGAGGCAGGGCCAAGAGGTTCTGGAGTTGAAGGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTTTGCATGAGACAGGGTCTCGTGTAGCTAAGCTAGCCTCAAACTTCTTTAACTCCAGAACCTCTTaGCCCTGCCTCTTAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: FCLHETGSRVAKLASNFFNSRTS*PCLLSA Trigger: AGCACTTAAGAGGCAGGGCCAAGAGGTTCTGGAGTT...AAAGAAGTTTGAGGCTAGCTTAGCTACACGAGACCCTGTCTCATGCAAACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTTTGCATGAGACAGGGTCTCGTGTAGCTAAGCTAGCCTCAAACTTCTTTTTTAATGTACTGGAGTaGAGTAGCAGAAATGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: FCLHETGSRVAKLASNFFFNVLE*SSRNVA Trigger: GGCAACATTTCTGCTACTTCACTCCAGTACATTAAA...AAAGAAGTTTGAGGCTAGCTTAGCTACACGAGACCCTGTCTCATGCAAACAAAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| 3UTR-3UTR GCA 90 bp | TCATTTTCTCAGCTGAGGCTAACAAAGCCTAGCTCCATCACATCCTTTCTTAGCATATTATATTTTGTTTaGATGAGACAGGGTCTCGTG | + |
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Preference number: 2 (lower is better) Translates to: SFSQLRLTKPSSITSFLSILYFV*MRQGLV Trigger: CACGAGACCCTGTCTCATGCAAACAAAATATAATAT...GCTAAGAAAGGATGTGATGGAGCTAGGCTTTGTTAGCCTCAGCTGAGAAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTTTGCATGAGACAGGGTCTCGTGTAGCTAAGCTAGCCTCAAACTTCTTTTTTAGTCCAGTGTGGTaGGACATGTATATAAATCAC | + |
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Preference number: 2 (lower is better) Translates to: FCLHETGSRVAKLASNFFFSPVW*DMYINH Trigger: GTGATTTATATACATGTCCCACCACACTGGACTAAA...AAAGAAGTTTGAGGCTAGCTTAGCTACACGAGACCCTGTCTCATGCAAACAAAA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| 3UTR CAA 90 bp | CTTCTAGCTTTACTAACACTGTATTGGTTTTATATTATATTTTGTTaGCATGAGACAGGGTCTCGTGTAGCTAAGCTAGCCTCAAACTTC | + |
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Preference number: 2 (lower is better) Translates to: LLALLTLYWFYIIFC*HETGSRVAKLASNF Trigger: GAAGTTTGAGGCTAGCTTAGCTACACGAGACCCTGTCTCATGCAAACAAAATATAATATAAAACCAATACAGTGTTAGTAAAGCTAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| 3UTR GCA 72 bp | AGAGGGGTCCTAAAGCCCGAGGAAGCACAACACACATaGTACAGCAGGTCAGTCACACCCAGGGAAGATAAG | + |
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Preference number: 3 (lower is better) Translates to: RGVLKPEEAQHT*YSRSVTPREDK Trigger: CTTATCTTCCCTGGGTGTGACTGACCTGCTGTAGCATGTGTGTTGTGCTTCCTCGGGCTTTAGGACCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| 3UTR CCA 72 bp | TCTATTACTCTAGTCTCGGGATCTAACACCCTCTCCTaGCCTCTGTGGGTGCCAGGTACATACATGGTACAC | + |
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Preference number: 3 (lower is better) Translates to: SITLVSGSNTLS*PLWVPGTYMVH Trigger: GTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATCCCGAGACTAGAGTAATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| 3UTR TCA 72 bp | AGCCCAGTGATAGAACTTCAACTGACACACGATGGATaGTTACAACCAACCAAGGCAGGCTTCTTAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SPVIELQLTHDG*LQPTKAGFLEE Trigger: CTCCTCTAAGAAGCCTGCCTTGGTTGGTTGTAATCATCCATCGTGTGTCAGTTGAAGTTCTATCACTGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| 3UTR-3UTR CAA 90 bp | GATTACAGGCCTGAGCCATGCTACTGTATTGATTCTAAATTAACTAAGAACAAGGAAGTAGCAGAAATGTaGCCCTTTCCTAATAACACT | + |
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Preference number: 3 (lower is better) Translates to: DYRPEPCYCIDSKLTKNKEVAEM*PFPNNT Trigger: AGTGTTATTAGGAAAGGGCAACATTTCTGCTACTTC...CTTGTTCTTAGTTAATTTAGAATCAATACAGTAGCATGGCTCAGGCCTGTAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| CDS-3UTR GCA 90 bp | ATTACTCTAGTCTCGGGATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACTCCTTCCCAGGAATaGCTCCTGTGCCCTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: ITLVSGSNTLSWPLWVPGTPSQE*LLCPLP Trigger: GGGCAGAGGGCACAGGAGGCATTCCTGGGAAGGAGT...ACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATCCCGAGACTAGAGTAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR TCA 90 bp | ACTTGGGAGGCAGAGGCAGGCATATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAGACAGTCTCTGGTCTaGGGCCTTCCTGACTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TWEAEAGIFLSSRPAWSTRQSLV*GLPDCS Trigger: GGAGCAGTCAGGAAGGCCTCAGACCAGAGACTGTCT...TGTAGACCAGGCTGGCCTCGAACTCAGAAATATGCCTGCCTCTGCCTCCCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| CDS-3UTR CCA 90 bp | CACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGACATACTGCTCCCTCGGACTGTaGCTCACACCGTGTGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: HPLLASVGARYIHGTQTYCSLGL*LTPCVR Trigger: TCTGACACACGGTGTGAGCCACAGTCCGAGGGAGCA...GTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR CCA 90 bp | ATTACTCTAGTCTCGGGATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTTCAGACATGACCCTCTaGGGCACTGCTTTGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ITLVSGSNTLSWPLWVPGSDMTL*GTALAA Trigger: GGCAGCCAAAGCAGTGCCCCAGAGGGTCATGTCTGA...ACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATCCCGAGACTAGAGTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR TCA 90 bp | GATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACACGACCATGCCGTAGGTaGCCTCTGAGGAAGGCACTA | + |
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Preference number: 4 (lower is better) Translates to: DLTPSPGLCGCQVHTWYTRPCRR*PLRKAL Trigger: TAGTGCCTTCCTCAGAGGTCACCTACGGCATGGTCG...TGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR TCA 90 bp | ATTACTCTAGTCTCGGGATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTAAGTCCTCATCCACCTaGGCAGACCTCCTCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: ITLVSGSNTLSWPLWVPGKSSST*ADLLTE Trigger: TTCTGTGAGGAGGTCTGCTCAGGTGGATGAGGACTT...ACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATCCCGAGACTAGAGTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR TCA 90 bp | GATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGCTCCACAGCTTACGTaGGTCAGGGCAGAAATCGAG | + |
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Preference number: 4 (lower is better) Translates to: DLTPSPGLCGCQVHTWYTAPQLT*VRAEIE Trigger: CTCGATTTCTGCCCTGACTCACGTAAGCTGTGGAGC...TGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR GCA 90 bp | CACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGACATACGAGGAGAAGATGCTCTaGAGAGTGCTGCGAGCATTC | + |
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Preference number: 4 (lower is better) Translates to: HPLLASVGARYIHGTQTYEEKML*RVLRAF Trigger: GAATGCTCGCAGCACTCTGCAGAGCATCTTCTCCTC...GTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR GCA 90 bp | CCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGACATACACGAAGAGAGGAGAAGATaGTCTGCAGAGTGCTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: PSPGLCGCQVHTWYTDIHEERRR*SAECCE Trigger: CTCGCAGCACTCTGCAGAGCATCTTCTCCTCTCTTC...GTGTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR CCA 90 bp | CACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGACATACGAGGGCCAAGACCTTTaGGGACTTGACAGTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HPLLASVGARYIHGTQTYEGQDL*GLDSLP Trigger: TGGAAGACTGTCAAGTCCCCAAAGGTCTTGGCCCTC...GTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGCATATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGGGCCAAGACCTTTaGGGACTTGACAGTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TWEAEAGIFLSSRPAWSTEGQDL*GLDSLP Trigger: TGGAAGACTGTCAAGTCCCCAAAGGTCTTGGCCCTC...TGTAGACCAGGCTGGCCTCGAACTCAGAAATATGCCTGCCTCTGCCTCCCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| CDS-3UTR TCA 90 bp | ATTACTCTAGTCTCGGGATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTGGAAGCTGTTCCCTGTaGTACTGTCGTTTTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: ITLVSGSNTLSWPLWVPGGSCSL*YCRFQW Trigger: CCACTGAAAACGACAGTATCACAGGGAACAGCTTCC...ACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATCCCGAGACTAGAGTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR TCA 90 bp | ACTTGGGAGGCAGAGGCAGGCATATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGGAAGCTGTTCCCTGTaGTACTGTCGTTTTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TWEAEAGIFLSSRPAWSTGSCSL*YCRFQW Trigger: CCACTGAAAACGACAGTATCACAGGGAACAGCTTCC...TGTAGACCAGGCTGGCCTCGAACTCAGAAATATGCCTGCCTCTGCCTCCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| CDS-3UTR TCA 90 bp | CCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGACATACACCCTTTAATTCAGACATaGCCCTCTGGGGCACTGCTT | + |
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Preference number: 4 (lower is better) Translates to: PSPGLCGCQVHTWYTDIHPLIQT*PSGALL Trigger: AAGCAGTGCCCCAGAGGGTCATGTCTGAATTAAAGG...GTGTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR TCA 90 bp | GATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACACACAAGGCTCAGCACTaGCAGCCAACAAGGAATGGA | + |
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Preference number: 4 (lower is better) Translates to: DLTPSPGLCGCQVHTWYTHKAQH*QPTRNG Trigger: TCCATTCCTTGTTGGCTGTCAGTGCTGAGCCTTGTG...TGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR TCA 90 bp | CCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGACATACACACGCAGGGATCTGACTaGTTTTTAGACTGCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: PSPGLCGCQVHTWYTDIHTQGSD*FLDCSS Trigger: AGATGAGCAGTCTAAAAATCAGTCAGATCCCTGCGT...GTGTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGCATATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGCAAACAAATCTCTTTaGAAGTTCCGAACGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: TWEAEAGIFLSSRPAWSTANKSL*KFRTQG Trigger: TCCCTGCGTTCGGAACTTCCAAAGAGATTTGTTTGC...TGTAGACCAGGCTGGCCTCGAACTCAGAAATATGCCTGCCTCTGCCTCCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| CDS-3UTR CCA 90 bp | CACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGACATACTCCCTGACTTCCTGTTaGTTCTGCCTCCATATTTAC | + |
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Preference number: 4 (lower is better) Translates to: HPLLASVGARYIHGTQTYSLTSC*FCLHIY Trigger: GTAAATATGGAGGCAGAACCAACAGGAAGTCAGGGA...GTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR CCA 90 bp | ATTACTCTAGTCTCGGGATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTCAGCATACACAATACTaGGAAGAGAGGAGAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: ITLVSGSNTLSWPLWVPGQHTQY*EERRRC Trigger: GCATCTTCTCCTCTCTTCCCAGTATTGTGTATGCTG...ACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATCCCGAGACTAGAGTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR TCA 90 bp | ATTACTCTAGTCTCGGGATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTATGGGGTTAGCACCATaGCTAAGCAGTTATACTTCT | + |
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Preference number: 4 (lower is better) Translates to: ITLVSGSNTLSWPLWVPGMGLAP*LSSYTS Trigger: AGAAGTATAACTGCTTAGTCATGGTGCTAACCCCAT...ACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATCCCGAGACTAGAGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR GCA 90 bp | CACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGACATACGGATTTCACACTCTGTaGTTCGGAAGCAGAATGTTT | + |
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Preference number: 4 (lower is better) Translates to: HPLLASVGARYIHGTQTYGFHTL*FGSRMF Trigger: AAACATTCTGCTTCCGAAGCACAGAGTGTGAAATCC...GTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR GCA 90 bp | ATTACTCTAGTCTCGGGATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACTTCCTGTTGGTTCTaGCTCCATATTTACAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: ITLVSGSNTLSWPLWVPGTSCWF*LHIYSA Trigger: AGCACTGTAAATATGGAGGCAGAACCAACAGGAAGT...ACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATCCCGAGACTAGAGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR GCA 90 bp | GATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGGGCACTGCTTTGGCTaGCTCTCTTATATTAGAATC | + |
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Preference number: 4 (lower is better) Translates to: DLTPSPGLCGCQVHTWYTGHCFG*LSYIRI Trigger: GATTCTAATATAAGAGAGGCAGCCAAAGCAGTGCCC...TGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGCATATTTCTGAGTTCGAGGCCAGCCTGGTCTACAATTAGAATCCATCCTTaGCTTCTTGGACACCTGATG | + |
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Preference number: 4 (lower is better) Translates to: TWEAEAGIFLSSRPAWSTIRIHP*LLGHLM Trigger: CATCAGGTGTCCAAGAAGCCAAGGATGGATTCTAAT...TGTAGACCAGGCTGGCCTCGAACTCAGAAATATGCCTGCCTCTGCCTCCCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| CDS-3UTR CCA 90 bp | GTGGTGGGACATGTATATAAATCACAGCAAAGGGAGGCTGAAGCAGAACTGATTTCAGACATGACCCTCTaGGGCACTGCTTTGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VVGHVYKSQQREAEAELISDMTL*GTALAA Trigger: GGCAGCCAAAGCAGTGCCCCAGAGGGTCATGTCTGA...AATCAGTTCTGCTTCAGCCTCCCTTTGCTGTGATTTATATACATGTCCCACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| 3UTR CAA 72 bp | TTTATAGCTGATGCTAGCCTTCAACTCCAGAACCTCTaGGCCCTGCCTCTTAAGTGCTGGGATTACAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: FIADASLQLQNL*ALPLKCWDYRP Trigger: AGGCCTGTAATCCCAGCACTTAAGAGGCAGGGCCAAGAGGTTCTGGAGTTGAAGGCTAGCATCAGCTATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| CDS-3UTR TCA 90 bp | CTAGCCTTCAACTCCAGAACCTCTTGGCCCTGCCTCTTAAGTGCTGGGATTACAACGCAGGGATCTGACTaGTTTTTAGACTGCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: LAFNSRTSWPCLLSAGITTQGSD*FLDCSS Trigger: AGATGAGCAGTCTAAAAATCAGTCAGATCCCTGCGT...TGTAATCCCAGCACTTAAGAGGCAGGGCCAAGAGGTTCTGGAGTTGAAGGCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| CDS-3UTR TCA 90 bp | ATTACTCTAGTCTCGGGATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTAATCTGGAGAAATGTTaGGAAGAATCTGCTCCATCA | + |
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Preference number: 4 (lower is better) Translates to: ITLVSGSNTLSWPLWVPGNLEKC*EESAPS Trigger: TGATGGAGCAGATTCTTCTCAACATTTCTCCAGATT...ACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATCCCGAGACTAGAGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR TCA 90 bp | GATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGCACTATTACTCTGTTaGGGCAATCTGGAGAAATGT | + |
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Preference number: 4 (lower is better) Translates to: DLTPSPGLCGCQVHTWYTALLLC*GNLEKC Trigger: ACATTTCTCCAGATTGCCTCAACAGAGTAATAGTGC...TGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR TCA 90 bp | AAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTCTAGTAGACAGTCTCTGGTCTaGGGCCTTCCTGACTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KSIFSKSTRRLTTIYYSSRQSLV*GLPDCS Trigger: GGAGCAGTCAGGAAGGCCTCAGACCAGAGACTGTCT...ACTAGAGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR TCA 90 bp | GGGTTGGATGGCTCAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACTGTGACTGCTTTCTaGTTCAGGACAAACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GLDGSAVKSIFSKSTRRLTVTAF*FRTNRT Trigger: AGTCCTGTTTGTCCTGAATCAGAAAGCAGTCACAGT...GAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTGAGCCATCCAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR TCA 90 bp | CTAGCCTTCAACTCCAGAACCTCTTGGCCCTGCCTCTTAAGTGCTGGGATTACAGTTATTTCCTTTACATaGCATGGGGTTAGCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LAFNSRTSWPCLLSAGITVISFT*HGVSTM Trigger: CATGGTGCTAACCCCATGTCATGTAAAGGAAATAAC...TGTAATCCCAGCACTTAAGAGGCAGGGCCAAGAGGTTCTGGAGTTGAAGGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR GCA 90 bp | CTAGCCTTCAACTCCAGAACCTCTTGGCCCTGCCTCTTAAGTGCTGGGATTACAGGATTTCACACTCTGTaGTTCGGAAGCAGAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LAFNSRTSWPCLLSAGITGFHTL*FGSRMF Trigger: AAACATTCTGCTTCCGAAGCACAGAGTGTGAAATCC...TGTAATCCCAGCACTTAAGAGGCAGGGCCAAGAGGTTCTGGAGTTGAAGGCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGGGAGGCAGAGGCAGGCATATTTCTGAGTTCGAGGCCAGCCTGGTCTACATTATGTGACTGTGACTaGTTTCTGATTCAGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TWEAEAGIFLSSRPAWSTLCDCD*FLIQDK Trigger: TTTGTCCTGAATCAGAAAGCAGTCACAGTCACATAA...TGTAGACCAGGCTGGCCTCGAACTCAGAAATATGCCTGCCTCTGCCTCCCAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGAAGGCATCACAGAACAAAGAGGGGTCCTAAAGCCCGAGGAAGCACAACAGGGCACTGCTTTGGCTaGCTCTCTTATATTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: MRRHHRTKRGPKARGSTTGHCFG*LSYIRI Trigger: GATTCTAATATAAGAGAGGCAGCCAAAGCAGTGCCC...TGTTGTGCTTCCTCGGGCTTTAGGACCCCTCTTTGTTCTGTGATGCCTTCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGGACATGTATATAAATCACAGCAAAGGGAGGCTGAAGCAGAACTGATTCCCAGGCGTTGGCAGTaGACATTAAGGAAGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVGHVYKSQQREAEAELIPRRWQ*TLRKLF Trigger: GAACAGCTTCCTTAATGTCCACTGCCAACGCCTGGG...AATCAGTTCTGCTTCAGCCTCCCTTTGCTGTGATTTATATACATGTCCCACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACCACTAAGAAGGCCTaGAGGGCCAAGACCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQLRAFSQNLHGGSQPSITTKKA*RAKTFG Trigger: CCCAAAGGTCTTGGCCCTCCAGGCCTTCTTAGTGGT...AATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR TCA 90 bp | TCATTTTCTCAGCTGAGGCTAACAAAGCCTAGCTCCATCACATCCTTTCTTAGCCCTTTAATTCAGACATaGCCCTCTGGGGCACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFSQLRLTKPSSITSFLSPLIQT*PSGALL Trigger: AAGCAGTGCCCCAGAGGGTCATGTCTGAATTAAAGG...GCTAAGAAAGGATGTGATGGAGCTAGGCTTTGTTAGCCTCAGCTGAGAAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGAAGGCATCACAGAACAAAGAGGGGTCCTAAAGCCCGAGGAAGCACAACAATGGGGTTAGCACCATaGCTAAGCAGTTATACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MRRHHRTKRGPKARGSTTMGLAP*LSSYTS Trigger: AGAAGTATAACTGCTTAGTCATGGTGCTAACCCCAT...TGTTGTGCTTCCTCGGGCTTTAGGACCCCTCTTTGTTCTGTGATGCCTTCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR TCA 90 bp | GGGTTGGATGGCTCAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCGTTATTTCCTTTACATaGCATGGGGTTAGCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: GLDGSAVKSIFSKSTRRLVISFT*HGVSTM Trigger: CATGGTGCTAACCCCATGTCATGTAAAGGAAATAAC...GAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTGAGCCATCCAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR TCA 90 bp | GGGTTGGATGGCTCAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCAGAAAACACCAGCTCTaGAACCTTGGCTTTAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLDGSAVKSIFSKSTRRLRKHQL*NLGFNQ Trigger: CTGATTAAAGCCAAGGTTTCAGAGCTGGTGTTTTCT...GAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTGAGCCATCCAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR GCA 90 bp | ATTACTCTAGTCTCGGGATCTAACACCCTCTCCTGGCCTCTGTGGGTGCCAGGTCCTCCATATTTACAGTaGTCTTATTTATACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITLVSGSNTLSWPLWVPGPPYLQ*SYLYSP Trigger: AGGACTGTATAAATAAGAGCACTGTAAATATGGAGG...ACCTGGCACCCACAGAGGCCAGGAGAGGGTGTTAGATCCCGAGACTAGAGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTCAGGAATGCCTCCTGTaGCCTCTGCCCTTAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QQLRAFSQNLHGGSQPSIQECLL*PLPLEK Trigger: TTTCTCTAAGGGCAGAGGGCACAGGAGGCATTCCTG...AATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR CCA 90 bp | TGGAGTGAAGTAGCAGAAATGTTGCCCTTTCCTAATAACACTGCTAGTAAAGTATGCTCCCTCGGACTGTaGCTCACACCGTGTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WSEVAEMLPFPNNTASKVCSLGL*LTPCVR Trigger: TCTGACACACGGTGTGAGCCACAGTCCGAGGGAGCA...TACTTTACTAGCAGTGTTATTAGGAAAGGGCAACATTTCTGCTACTTCACTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR CCA 90 bp | CTAGCCTTCAACTCCAGAACCTCTTGGCCCTGCCTCTTAAGTGCTGGGATTACATCCAGGGAATACACTTaGCTTTGCTCATTTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAFNSRTSWPCLLSAGITSREYT*LCSFSD Trigger: ATCTGAAAATGAGCAAAGCCAAGTGTATTCCCTGGA...TGTAATCCCAGCACTTAAGAGGCAGGGCCAAGAGGTTCTGGAGTTGAAGGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTGGATGGCTCAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCATTAGAATCCATCCTTaGCTTCTTGGACACCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLDGSAVKSIFSKSTRRLIRIHP*LLGHLM Trigger: CATCAGGTGTCCAAGAAGCCAAGGATGGATTCTAAT...GAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTGAGCCATCCAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR TCA 90 bp | AAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTCTAGTGCCGTAGGTGACCTCTaGGGAAGGCACTATTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSIFSKSTRRLTTIYYSSAVGDL*GRHYYS Trigger: AGAGTAATAGTGCCTTCCTCAGAGGTCACCTACGGC...ACTAGAGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTCTAGTCCCAGGCGTTGGCAGTaGACATTAAGGAAGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSIFSKSTRRLTTIYYSSPRRWQ*TLRKLF Trigger: GAACAGCTTCCTTAATGTCCACTGCCAACGCCTGGG...ACTAGAGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR CCA 90 bp | GGGTTGGATGGCTCAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCTCCAGGGAATACACTTaGCTTTGCTCATTTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLDGSAVKSIFSKSTRRLSREYT*LCSFSD Trigger: ATCTGAAAATGAGCAAAGCCAAGTGTATTCCCTGGA...GAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTGAGCCATCCAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR TCA 90 bp | TCATTTTCTCAGCTGAGGCTAACAAAGCCTAGCTCCATCACATCCTTTCTTAGCACTGTGACTGCTTTCTaGTTCAGGACAAACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SFSQLRLTKPSSITSFLSTVTAF*FRTNRT Trigger: AGTCCTGTTTGTCCTGAATCAGAAAGCAGTCACAGT...GCTAAGAAAGGATGTGATGGAGCTAGGCTTTGTTAGCCTCAGCTGAGAAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTGGATGGCTCAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCTTATGTGACTGTGACTaGTTTCTGATTCAGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLDGSAVKSIFSKSTRRLLCDCD*FLIQDK Trigger: TTTGTCCTGAATCAGAAAGCAGTCACAGTCACATAA...GAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTGAGCCATCCAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTAGCTATCTTCTGAGCTaGTGCAGCAGAAAACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QQLRAFSQNLHGGSQPSISYLLS*CSRKHQ Trigger: CTGGTGTTTTCTGCTGCAGCAGCTCAGAAGATAGCT...AATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTTGCTCTGCAGAGTGCTaGGAGCATTCAAAGCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: QQLRAFSQNLHGGSQPSICSAEC*EHSKLS Trigger: AGATAGCTTTGAATGCTCGCAGCACTCTGCAGAGCA...AATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTTCAGAGAAGCTCTCCTaGCTCTGTCTTTCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QLRAFSQNLHGGSQPSITSEKLS*LCLSRC Trigger: ACATCGTGAAAGACAGAGTCAGGAGAGCTTCTCTGA...AGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTTTCAAAGCTATCTTCTaGGCTGCTGCAGCAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QQLRAFSQNLHGGSQPSIFKAIF*AAAAEN Trigger: GTTTTCTGCTGCAGCAGCTCAGAAGATAGCTTTGAA...AATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR CCA 90 bp | TTTTGTTTGCATGAGACAGGGTCTCGTGTAGCTAAGCTAGCCTCAAACTTCTTTTCCCTGACTTCCTGTTaGTTCTGCCTCCATATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FCLHETGSRVAKLASNFFSLTSC*FCLHIY Trigger: GTAAATATGGAGGCAGAACCAACAGGAAGTCAGGGA...AAAGAAGTTTGAGGCTAGCTTAGCTACACGAGACCCTGTCTCATGCAAACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTGGATGGCTCAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCCATTGGCAATTACATTaGAATATTTTTCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLDGSAVKSIFSKSTRRLHWQLH*NIFQAG Trigger: TCCAGCCTGAAAAATATTCCAATGTAATTGCCAATG...GAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTGAGCCATCCAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR CCA 90 bp | CAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTAACTCGAAAAGGCTCTaGATCTTCAGCACACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLRAFSQNLHGGSQPSITNSKRL*IFSTQG Trigger: GCCTTGTGTGCTGAAGATCCAGAGCCTTTTCGAGTT...AGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTCTAGTGCAAACAAATCTCTTTaGAAGTTCCGAACGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSIFSKSTRRLTTIYYSSANKSL*KFRTQG Trigger: TCCCTGCGTTCGGAACTTCCAAAGAGATTTGTTTGC...ACTAGAGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTTTAGCGGTACTTGGATaGGAGCTACACAACTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: QQLRAFSQNLHGGSQPSILAVLG*ELHNSF Trigger: AAATGAGTTGTGTAGCTCCCATCCAAGTACCGCTAA...AATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR CCA 90 bp | TTGTATGAACCGCAATTTTCATTTTCTCAGCTGAGGCTAACAAAGCCTAGCTCCTTAGCGGTACTTGGATaGGAGCTACACAACTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LYEPQFSFSQLRLTKPSSLAVLG*ELHNSF Trigger: AAATGAGTTGTGTAGCTCCCATCCAAGTACCGCTAA...GGAGCTAGGCTTTGTTAGCCTCAGCTGAGAAAATGAAAATTGCGGTTCATACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTGAAATCCTGTTGCAGTaGGTAGCTGTTCTCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QLRAFSQNLHGGSQPSITEILLQ*VAVLIQ Trigger: TTGGATGAGAACAGCTACCCACTGCAACAGGATTTC...AGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR TCA 90 bp | AAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTCTAGTAGACCTTTGGGGACTTaGCAGTCTTCCAGATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KSIFSKSTRRLTTIYYSSRPLGT*QSSRFL Trigger: TAAAAATCTGGAAGACTGTCAAGTCCCCAAAGGTCT...ACTAGAGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR TCA 90 bp | GATTACAGGCCTGAGCCATGCTACTGTATTGATTCTAAATTAACTAAGAACAAGTCAGAGAAGCTCTCCTaGCTCTGTCTTTCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: DYRPEPCYCIDSKLTKNKSEKLS*LCLSRC Trigger: ACATCGTGAAAGACAGAGTCAGGAGAGCTTCTCTGA...CTTGTTCTTAGTTAATTTAGAATCAATACAGTAGCATGGCTCAGGCCTGTAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTACTAATATATCAGGCTaGAACTGCTCCAACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QLRAFSQNLHGGSQPSITTNISG*NCSNST Trigger: TGTGGAGTTGGAGCAGTTGCAGCCTGATATATTAGT...AGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGGACATGTATATAAATCACAGCAAAGGGAGGCTGAAGCAGAACTGATTACACAACTCATTTGGTaGCAGGTTTTCTTCATTACT | + |
|
Preference number: 4 (lower is better) Translates to: VVGHVYKSQQREAEAELITQLIW*QVFFIT Trigger: AGTAATGAAGAAAACCTGCCACCAAATGAGTTGTGT...AATCAGTTCTGCTTCAGCCTCCCTTTGCTGTGATTTATATACATGTCCCACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR CCA 90 bp | TTGTATGAACCGCAATTTTCATTTTCTCAGCTGAGGCTAACAAAGCCTAGCTCCGCTACACAACTCATTTaGTGGCAGGTTTTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LYEPQFSFSQLRLTKPSSATQLI*WQVFFI Trigger: AATGAAGAAAACCTGCCACCAAATGAGTTGTGTAGC...GGAGCTAGGCTTTGTTAGCCTCAGCTGAGAAAATGAAAATTGCGGTTCATACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGGACATGTATATAAATCACAGCAAAGGGAGGCTGAAGCAGAACTGATTCCTCCATATTTACAGTaGTCTTATTTATACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVGHVYKSQQREAEAELIPPYLQ*SYLYSP Trigger: AGGACTGTATAAATAAGAGCACTGTAAATATGGAGG...AATCAGTTCTGCTTCAGCCTCCCTTTGCTGTGATTTATATACATGTCCCACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGGACATGTATATAAATCACAGCAAAGGGAGGCTGAAGCAGAACTGATTGAATACACTTGGCTTTaGTCATTTTCAGATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVGHVYKSQQREAEAELIEYTWL*SFSDSS Trigger: AGAAGAATCTGAAAATGAGCAAAGCCAAGTGTATTC...AATCAGTTCTGCTTCAGCCTCCCTTTGCTGTGATTTATATACATGTCCCACCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTGCTACACAACTCATTTaGTGGCAGGTTTTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: QLRAFSQNLHGGSQPSITATQLI*WQVFFI Trigger: AATGAAGAAAACCTGCCACCAAATGAGTTGTGTAGC...AGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR CCA 90 bp | CAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTAGAGCTTTAGAATGGTaGGAATCATCTTTACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLRAFSQNLHGGSQPSITRALEW*ESSLQL Trigger: GAGCTGTAAAGATGATTCCCACCATTCTAAAGCTCT...AGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR TCA 90 bp | GATTACAGGCCTGAGCCATGCTACTGTATTGATTCTAAATTAACTAAGAACAAGAGACCTTTGGGGACTTaGCAGTCTTCCAGATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: DYRPEPCYCIDSKLTKNKRPLGT*QSSRFL Trigger: TAAAAATCTGGAAGACTGTCAAGTCCCCAAAGGTCT...CTTGTTCTTAGTTAATTTAGAATCAATACAGTAGCATGGCTCAGGCCTGTAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTACACAACTCATTTGGTaGCAGGTTTTCTTCATTACT | + |
|
Preference number: 4 (lower is better) Translates to: QLRAFSQNLHGGSQPSITTQLIW*QVFFIT Trigger: AGTAATGAAGAAAACCTGCCACCAAATGAGTTGTGT...AGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR CCA 90 bp | TGGAGTGAAGTAGCAGAAATGTTGCCCTTTCCTAATAACACTGCTAGTAAAGTAAGAGCTTTAGAATGGTaGGAATCATCTTTACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSEVAEMLPFPNNTASKVRALEW*ESSLQL Trigger: GAGCTGTAAAGATGATTCCCACCATTCTAAAGCTCT...TACTTTACTAGCAGTGTTATTAGGAAAGGGCAACATTTCTGCTACTTCACTCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTGAATACACTTGGCTTTaGTCATTTTCAGATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLRAFSQNLHGGSQPSITEYTWL*SFSDSS Trigger: AGAAGAATCTGAAAATGAGCAAAGCCAAGTGTATTC...AGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
||
| CDS-3UTR CAA 90 bp | CCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGACATACACCCCAAGCCCACACATTaGTCCACTAGTCATATCACT | + |
|
Preference number: 5 (lower is better) Translates to: PSPGLCGCQVHTWYTDIHPKPTH*STSHIT Trigger: AGTGATATGACTAGTGGACAAATGTGTGGGCTTGGG...GTGTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR CAA 90 bp | CACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGACATACGGCACTATTACTCTGTaGAGGCAATCTGGAGAAATG | + |
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Preference number: 5 (lower is better) Translates to: HPLLASVGARYIHGTQTYGTITL*RQSGEM Trigger: CATTTCTCCAGATTGCCTCAACAGAGTAATAGTGCC...GTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR CAA 90 bp | CACCCTCTCCTGGCCTCTGTGGGTGCCAGGTACATACATGGTACACAGACATACAAGACCTTTGGGGACTaGACAGTCTTCCAGATTTTT | + |
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Preference number: 5 (lower is better) Translates to: HPLLASVGARYIHGTQTYKTFGD*TVFQIF Trigger: AAAAATCTGGAAGACTGTCAAGTCCCCAAAGGTCTT...GTATGTCTGTGTACCATGTATGTACCTGGCACCCACAGAGGCCAGGAGAGGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR CAA 90 bp | ACTTGGGAGGCAGAGGCAGGCATATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAGCTACACAACTCATTaGGTGGCAGGTTTTCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: TWEAEAGIFLSSRPAWSTSYTTH*VAGFLH Trigger: ATGAAGAAAACCTGCCACCAAATGAGTTGTGTAGCT...TGTAGACCAGGCTGGCCTCGAACTCAGAAATATGCCTGCCTCTGCCTCCCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| CDS CCA 90 bp | TGGGAATCATCTTTACAGCTCCAGCTCCTGTTAGCGGTACTTGGATaGGAGCTACACAACTCATTTGGTGGCAGGTTTTCTTCATTACTG | + |
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Preference number: 5 (lower is better) Translates to: WESSLQLQLLLAVLG*ELHNSFGGRFSSLL Trigger: CAGTAATGAAGAAAACCTGCCACCAAATGAGTTGTGTAGCTCCCATCCAAGTACCGCTAACAGGAGCTGGAGCTGTAAAGATGATTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS CCA 90 bp | ATGGTGGGAATCATCTTTACAGCTCCAGCTCCTGTTAGCGGTACTTaGATGGGAGCTACACAACTCATTTGGTGGCAGGTTTTCTTCATT | + |
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Preference number: 5 (lower is better) Translates to: MVGIIFTAPAPVSGT*MGATQLIWWQVFFI Trigger: AATGAAGAAAACCTGCCACCAAATGAGTTGTGTAGCTCCCATCCAAGTACCGCTAACAGGAGCTGGAGCTGTAAAGATGATTCCCACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS CCA 90 bp | CTGGGGCACTGCTTTGGCTGCCTCTCTTATATTAGAATCCATCCTTaGCTTCTTGGACACCTGATGGACTTCAGAAAGAGCTTTAGAATG | + |
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Preference number: 5 (lower is better) Translates to: LGHCFGCLSYIRIHP*LLGHLMDFRKSFRM Trigger: CATTCTAAAGCTCTTTCTGAAGTCCATCAGGTGTCCAAGAAGCCAAGGATGGATTCTAATATAAGAGAGGCAGCCAAAGCAGTGCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS-3UTR CAA 90 bp | GGGTTGGATGGCTCAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCAGCTACACAACTCATTaGGTGGCAGGTTTTCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GLDGSAVKSIFSKSTRRLSYTTH*VAGFLH Trigger: ATGAAGAAAACCTGCCACCAAATGAGTTGTGTAGCT...GAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTGAGCCATCCAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS GCA 90 bp | TCCACTAGTCATATCACTCAGGTTAACCTGGGATTTCACACTCTGTaGTTCGGAAGCAGAATGTTTAAAGTCCTCATCCACCTGAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: STSHITQVNLGFHTL*FGSRMFKVLIHLSR Trigger: TCTGCTCAGGTGGATGAGGACTTTAAACATTCTGCTTCCGAAGCACAGAGTGTGAAATCCCAGGTTAACCTGAGTGATATGACTAGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111917.3 ENSMUST00000227375.2 ENSMUST00000228626.2 |
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| CDS CCA 90 bp | AATGCTGTTTATAGAAGAGTCGGACTTTTTCCCAGGCGTTGGCAGTaGACATTAAGGAAGCTGTTCCCTGTGATACTGTCGTTTTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: NAVYRRVGLFPRRWQ*TLRKLFPVILSFSV Trigger: CACTGAAAACGACAGTATCACAGGGAACAGCTTCCTTAATGTCCACTGCCAACGCCTGGGAAAAAGTCCGACTCTTCTATAAACAGCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111917.3 ENSMUST00000227006.2 ENSMUST00000227375.2 ENSMUST00000228337.2 ENSMUST00000228626.2 |
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| CDS CCA 90 bp | ACAAGGAATGCTGTTTATAGAAGAGTCGGACTTTTTCCCAGGCGTTaGCAGTGGACATTAAGGAAGCTGTTCCCTGTGATACTGTCGTTT | + |
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Preference number: 5 (lower is better) Translates to: TRNAVYRRVGLFPRR*QWTLRKLFPVILSF Trigger: AAACGACAGTATCACAGGGAACAGCTTCCTTAATGTCCACTGCCAACGCCTGGGAAAAAGTCCGACTCTTCTATAAACAGCATTCCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111917.3 ENSMUST00000227006.2 ENSMUST00000227375.2 ENSMUST00000228337.2 ENSMUST00000228626.2 |
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| CDS-3UTR CAA 90 bp | GTGGTGGGACATGTATATAAATCACAGCAAAGGGAGGCTGAAGCAGAACTGATTCCCAAGCCCACACATTaGTCCACTAGTCATATCACT | + |
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Preference number: 5 (lower is better) Translates to: VVGHVYKSQQREAEAELIPKPTH*STSHIT Trigger: AGTGATATGACTAGTGGACAAATGTGTGGGCTTGGG...AATCAGTTCTGCTTCAGCCTCCCTTTGCTGTGATTTATATACATGTCCCACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| CDS-3UTR CAA 90 bp | GGGTTGGATGGCTCAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCGGAATACACTTGGCTTaGCTCATTTTCAGATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: GLDGSAVKSIFSKSTRRLGIHLA*LIFRFF Trigger: GAAGAATCTGAAAATGAGCAAAGCCAAGTGTATTCC...GAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTGAGCCATCCAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS-3UTR CAA 90 bp | ATGAGAAGGCATCACAGAACAAAGAGGGGTCCTAAAGCCCGAGGAAGCACAACAGGAATACACTTGGCTTaGCTCATTTTCAGATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: MRRHHRTKRGPKARGSTTGIHLA*LIFRFF Trigger: GAAGAATCTGAAAATGAGCAAAGCCAAGTGTATTCC...TGTTGTGCTTCCTCGGGCTTTAGGACCCCTCTTTGTTCTGTGATGCCTTCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| CDS-3UTR CAA 90 bp | AAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACTCTAGTCGCAAACAAATCTCTTaGGAAGTTCCGAACGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: KSIFSKSTRRLTTIYYSSRKQIS*EVPNAG Trigger: CCCTGCGTTCGGAACTTCCAAAGAGATTTGTTTGCG...ACTAGAGTAATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS CCA 90 bp | CTTACTAAAATCCCCTTCAGTTCGTCTGACTCCCTGACTTCCTGTTaGTTCTGCCTCCATATTTACAGTGCTCTTATTTATACAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: LTKIPFSSSDSLTSC*FCLHIYSALIYTVL Trigger: CAGGACTGTATAAATAAGAGCACTGTAAATATGGAGGCAGAACCAACAGGAAGTCAGGGAGTCAGACGAACTGAAGGGGATTTTAGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS-3UTR CAA 90 bp | TCATTTTCTCAGCTGAGGCTAACAAAGCCTAGCTCCATCACATCCTTTCTTAGCAAGACCTTTGGGGACTaGACAGTCTTCCAGATTTTT | + |
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Preference number: 5 (lower is better) Translates to: SFSQLRLTKPSSITSFLSKTFGD*TVFQIF Trigger: AAAAATCTGGAAGACTGTCAAGTCCCCAAAGGTCTT...GCTAAGAAAGGATGTGATGGAGCTAGGCTTTGTTAGCCTCAGCTGAGAAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228626.2 |
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| CDS-3UTR CAA 90 bp | CAGCAGTTAAGAGCATTTTCTCAAAATCTACACGGCGGCTCACAACCATCTATTACATTGGCAATTACATaGGAATATTTTTCAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: QQLRAFSQNLHGGSQPSITLAIT*EYFSGW Trigger: CCAGCCTGAAAAATATTCCAATGTAATTGCCAATGT...AATAGATGGTTGTGAGCCGCCGTGTAGATTTTGAGAAAATGCTCTTAACTGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS TCA 72 bp | GACTGTGGCTCACACCGTGTGTCAGAGAAGCTCTCCTaGCTCTGTCTTTCACGATGTCCTGTCGGCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: DCGSHRVSEKLS*LCLSRCPVGSG Trigger: GCCAGAGCCGACAGGACATCGTGAAAGACAGAGTCAGGAGAGCTTCTCTGACACACGGTGTGAGCCACAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS CCA 72 bp | AGTACGCTGAGAAATTCAGCTTCAGCAGACAGTCTCTaGTCTGAGGCCTTCCTGACTGCTCCCTCGGACTGT | + |
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Preference number: 6 (lower is better) Translates to: STLRNSASADSL*SEAFLTAPSDC Trigger: ACAGTCCGAGGGAGCAGTCAGGAAGGCCTCAGACCAGAGACTGTCTGCTGAAGCTGAATTTCTCAGCGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS CCA 72 bp | CACAGAAGTCGTCAAAACGTCACCACTAAGAAGGCCTaGAGGGCCAAGACCTTTGGGGACTTGACAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HRSRQNVTTKKA*RAKTFGDLTVF Trigger: GAAGACTGTCAAGTCCCCAAAGGTCTTGGCCCTCCAGGCCTTCTTAGTGGTGACGTTTTGACGACTTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111917.3 ENSMUST00000227375.2 ENSMUST00000228337.2 ENSMUST00000228626.2 |
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| CDS CAA 90 bp | AACGTCACCACTAAGAAGGCCTGGAGGGCCAAGACCTTTGGGGACTaGACAGTCTTCCAGATTTTTAAACTCCTGATCTCCAGCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: NVTTKKAWRAKTFGD*TVFQIFKLLISSLQ Trigger: CTGAAGGCTGGAGATCAGGAGTTTAAAAATCTGGAAGACTGTCAAGTCCCCAAAGGTCTTGGCCCTCCAGGCCTTCTTAGTGGTGACGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111917.3 ENSMUST00000227375.2 ENSMUST00000228337.2 ENSMUST00000228626.2 |
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| CDS CCA 72 bp | CTCCTGACTCTGTCTTTCACGATGTCCTGTCGGCTCTaGCTTTGTCCCTGTACTCATCTGTTCAGTACAACA | + |
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Preference number: 6 (lower is better) Translates to: LLTLSFTMSCRL*LCPCTHLFSTT Trigger: TGTTGTACTGAACAGATGAGTACAGGGACAAAGCCAGAGCCGACAGGACATCGTGAAAGACAGAGTCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS TCA 72 bp | GCTTCGGAAGCAGAATGTTTAAAGTCCTCATCCACCTaGGCAGACCTCCTCACAGAAGTCGTCAAAACGTCA | + |
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Preference number: 6 (lower is better) Translates to: ASEAECLKSSST*ADLLTEVVKTS Trigger: TGACGTTTTGACGACTTCTGTGAGGAGGTCTGCTCAGGTGGATGAGGACTTTAAACATTCTGCTTCCGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111917.3 ENSMUST00000227375.2 ENSMUST00000228337.2 ENSMUST00000228626.2 |
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| CDS CCA 72 bp | TATAGAAGAGTCGGACTTTTTCCCAGGCGTTGGCAGTaGACATTAAGGAAGCTGTTCCCTGTGATACTGTCG | + |
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Preference number: 6 (lower is better) Translates to: YRRVGLFPRRWQ*TLRKLFPVILS Trigger: CGACAGTATCACAGGGAACAGCTTCCTTAATGTCCACTGCCAACGCCTGGGAAAAAGTCCGACTCTTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111917.3 ENSMUST00000227006.2 ENSMUST00000227375.2 ENSMUST00000228337.2 ENSMUST00000228626.2 |
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| CDS CCA 72 bp | ATCATCTTTACAGCTCCAGCTCCTGTTAGCGGTACTTaGATGGGAGCTACACAACTCATTTGGTGGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: IIFTAPAPVSGT*MGATQLIWWQV Trigger: AACCTGCCACCAAATGAGTTGTGTAGCTCCCATCCAAGTACCGCTAACAGGAGCTGGAGCTGTAAAGATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS CAA 72 bp | ACTAAGAAGGCCTGGAGGGCCAAGACCTTTGGGGACTaGACAGTCTTCCAGATTTTTAAACTCCTGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: TKKAWRAKTFGD*TVFQIFKLLIS Trigger: GGAGATCAGGAGTTTAAAAATCTGGAAGACTGTCAAGTCCCCAAAGGTCTTGGCCCTCCAGGCCTTCTTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111917.3 ENSMUST00000227375.2 ENSMUST00000228337.2 ENSMUST00000228626.2 |
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| CDS TCA 72 bp | GGCTTACTAAAATCCCCTTCAGTTCGTCTGACTCCCTaGCTTCCTGTTGGTTCTGCCTCCATATTTACAGTG | + |
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Preference number: 6 (lower is better) Translates to: GLLKSPSVRLTP*LPVGSASIFTV Trigger: CACTGTAAATATGGAGGCAGAACCAACAGGAAGTCAGGGAGTCAGACGAACTGAAGGGGATTTTAGTAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS CCA 72 bp | GCTGTTTATAGAAGAGTCGGACTTTTTCCCAGGCGTTaGCAGTGGACATTAAGGAAGCTGTTCCCTGTGATA | + |
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Preference number: 6 (lower is better) Translates to: AVYRRVGLFPRR*QWTLRKLFPVI Trigger: TATCACAGGGAACAGCTTCCTTAATGTCCACTGCCAACGCCTGGGAAAAAGTCCGACTCTTCTATAAACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111917.3 ENSMUST00000227006.2 ENSMUST00000227375.2 ENSMUST00000228337.2 ENSMUST00000228626.2 |
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| CDS CCA 72 bp | TGCTTTGGCTGCCTCTCTTATATTAGAATCCATCCTTaGCTTCTTGGACACCTGATGGACTTCAGAAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: CFGCLSYIRIHP*LLGHLMDFRKS Trigger: GCTCTTTCTGAAGTCCATCAGGTGTCCAAGAAGCCAAGGATGGATTCTAATATAAGAGAGGCAGCCAAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS GCA 72 bp | CATATCACTCAGGTTAACCTGGGATTTCACACTCTGTaGTTCGGAAGCAGAATGTTTAAAGTCCTCATCCAC | + |
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Preference number: 6 (lower is better) Translates to: HITQVNLGFHTL*FGSRMFKVLIH Trigger: GTGGATGAGGACTTTAAACATTCTGCTTCCGAAGCACAGAGTGTGAAATCCCAGGTTAACCTGAGTGATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111917.3 ENSMUST00000227375.2 ENSMUST00000228337.2 ENSMUST00000228626.2 |
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| CDS CCA 72 bp | CACATTTGTCCACTAGTCATATCACTCAGGTTAACCTaGGATTTCACACTCTGTGCTTCGGAAGCAGAATGT | + |
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Preference number: 6 (lower is better) Translates to: HICPLVISLRLT*DFTLCASEAEC Trigger: ACATTCTGCTTCCGAAGCACAGAGTGTGAAATCCCAGGTTAACCTGAGTGATATGACTAGTGGACAAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111917.3 ENSMUST00000227375.2 ENSMUST00000228626.2 |
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| CDS CCA 72 bp | ATCCCCTTCAGTTCGTCTGACTCCCTGACTTCCTGTTaGTTCTGCCTCCATATTTACAGTGCTCTTATTTAT | + |
|
Preference number: 6 (lower is better) Translates to: IPFSSSDSLTSC*FCLHIYSALIY Trigger: ATAAATAAGAGCACTGTAAATATGGAGGCAGAACCAACAGGAAGTCAGGGAGTCAGACGAACTGAAGGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS GCA 72 bp | TTCAGTTCGTCTGACTCCCTGACTTCCTGTTGGTTCTaGCTCCATATTTACAGTGCTCTTATTTATACAGTC | + |
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Preference number: 6 (lower is better) Translates to: FSSSDSLTSCWF*LHIYSALIYTV Trigger: GACTGTATAAATAAGAGCACTGTAAATATGGAGGCAGAACCAACAGGAAGTCAGGGAGTCAGACGAACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS GCA 72 bp | CTGAGTACTGCATGGACTAATATATCAGGCTGCAACTaGTCCAACTCCACAAACTCTACAGTGTTCATTTTC | + |
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Preference number: 6 (lower is better) Translates to: LSTAWTNISGCN*SNSTNSTVFIF Trigger: GAAAATGAACACTGTAGAGTTTGTGGAGTTGGAGCAGTTGCAGCCTGATATATTAGTCCATGCAGTACTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111917.3 |
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| CDS GCA 72 bp | CCTGACTTCCTGTTGGTTCTGCCTCCATATTTACAGTaGTCTTATTTATACAGTCCTGACCTTTATCATTCC | + |
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Preference number: 6 (lower is better) Translates to: PDFLLVLPPYLQ*SYLYSPDLYHS Trigger: GGAATGATAAAGGTCAGGACTGTATAAATAAGAGCACTGTAAATATGGAGGCAGAACCAACAGGAAGTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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| CDS TCA 72 bp | AAACAAATCTCTTTGGAAGTTCCGAACGCAGGGATCTaGCTGATTTTTAGACTGCTCATCTGTAATTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KQISLEVPNAGI*LIFRLLICNFL Trigger: AAGAAAATTACAGATGAGCAGTCTAAAAATCAGTCAGATCCCTGCGTTCGGAACTTCCAAAGAGATTTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111917.3 ENSMUST00000228626.2 |
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