Pregenerated sensors for SHISA9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022494Ensembl transcript IDs: ENSMUST00000023138.8, ENSMUST00000170672.9
Found 254 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCACCCACACTTATGACATTTTTCACTCCAAAGCAGTTGAAGTTTaGCAGCAGTGGCAGCGGCACGCTGAAAGGGAAAGAGTGGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: TTHTYDIFHSKAVEV*QQWQRHAERERVVG Trigger: CCCCACCACTCTTTCCCTTTCAGCGTGCCGCTGCCACTGCTGCCAAACTTCAACTGCTTTGGAGTGAAAAATGTCATAAGTGTGGGTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR TCA 90 bp | TCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATGCTGTaGTGCCGAGAGCCCAGGCAGCAGAACATCACCACATGGGATGCT | + |
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Preference number: 1 (lower is better) Translates to: SYLLGTWKLSGMLML*CREPRQQNITTWDA Trigger: AGCATCCCATGTGGTGATGTTCTGCTGCCTGGGCTCTCGGCATCACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR GCA 90 bp | ATGAGCAAATTCCTTCCCAAGCACTCTGGCACACTCCTCTTCGTGTaGCCATCCTTTTTCTTCTACCAGGAAAGACAGAACAGGGGGACC | + |
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Preference number: 1 (lower is better) Translates to: MSKFLPKHSGTLLFV*PSFFFYQERQNRGT Trigger: GGTCCCCCTGTTCTGTCTTTCCTGGTAGAAGAAAAAGGATGGGCACACGAAGAGGAGTGTGCCAGAGTGCTTGGGAAGGAATTTGCTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR CCA 90 bp | AAGTTTGGCAGCAGTGGCAGCGGCACGCTGAAAGGGAAAGAGTGGTaGGGACAGACTGTTCATAGAGGATGGTTTTTGTCTTTGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: KFGSSGSGTLKGKEW*GQTVHRGWFLSLFQ Trigger: CTGGAACAAAGACAAAAACCATCCTCTATGAACAGTCTGTCCCCACCACTCTTTCCCTTTCAGCGTGCCGCTGCCACTGCTGCCAAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR CCA 90 bp | TTGAAGTTTGGCAGCAGTGGCAGCGGCACGCTGAAAGGGAAAGAGTaGTGGGGACAGACTGTTCATAGAGGATGGTTTTTGTCTTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: LKFGSSGSGTLKGKE*WGQTVHRGWFLSLF Trigger: GAACAAAGACAAAAACCATCCTCTATGAACAGTCTGTCCCCACCACTCTTTCCCTTTCAGCGTGCCGCTGCCACTGCTGCCAAACTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR CCA 90 bp | ACTTATGACATTTTTCACTCCAAAGCAGTTGAAGTTTGGCAGCAGTaGCAGCGGCACGCTGAAAGGGAAAGAGTGGTGGGGACAGACTGT | + |
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Preference number: 1 (lower is better) Translates to: TYDIFHSKAVEVWQQ*QRHAERERVVGTDC Trigger: ACAGTCTGTCCCCACCACTCTTTCCCTTTCAGCGTGCCGCTGCCACTGCTGCCAAACTTCAACTGCTTTGGAGTGAAAAATGTCATAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR GCA 90 bp | GCTGTGATGCCGAGAGCCCAGGCAGCAGAACATCACCACATGGGATaGTCCAATTCTATTTCACTAGATTTTTACACCAAAGAAGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: AVMPRAQAAEHHHMG*SNSISLDFYTKEAV Trigger: CACAGCTTCTTTGGTGTAAAAATCTAGTGAAATAGAATTGGAGCATCCCATGTGGTGATGTTCTGCTGCCTGGGCTCTCGGCATCACAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR GCA 90 bp | CAGTTCATCTCCCAAAGTCAAACAGGAAGCAACGAGCAAGCACTGTaGGAGCTGTCTATGACCGAATTACTTGGGAAGTATATGCTACCT | + |
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Preference number: 1 (lower is better) Translates to: QFISQSQTGSNEQAL*ELSMTELLGKYMLP Trigger: AGGTAGCATATACTTCCCAAGTAATTCGGTCATAGACAGCTCGCACAGTGCTTGCTCGTTGCTTCCTGTTTGACTTTGGGAGATGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
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| 3UTR GCA 90 bp | GTTAATTGTCTGGGCTCACCTACAAAGGAAAGACAACATCACTACTaGAGGAAAACAGGAGGCAGGAAGGTTAAAGGAACAGAGGATGCA | + |
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Preference number: 1 (lower is better) Translates to: VNCLGSPTKERQHHY*RKTGGRKVKGTEDA Trigger: TGCATCCTCTGTTCCTTTAACCTTCCTGCCTCCTGTTTTCCTGCAGTAGTGATGTTGTCTTTCCTTTGTAGGTGAGCCCAGACAATTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR GCA 90 bp | CCCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTaGCAAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTA | + |
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Preference number: 1 (lower is better) Translates to: PHASDGTQPWKDQRY*QILPTCLEHGNYLV Trigger: TACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTTGGCAATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR GCA 90 bp | CTTTATTATTCTCTGGACCCCTTGGCCATCATAAAAACCTATCACTaGCAACATCATGGTCTTCCAGGGAGTTCTTTAGAATGTTCTCCC | + |
|
Preference number: 1 (lower is better) Translates to: LYYSLDPLAIIKTYH*QHHGLPGSSLECSP Trigger: GGGAGAACATTCTAAAGAACTCCCTGGAAGACCATGATGTTGGCAGTGATAGGTTTTTATGATGGCCAAGGGGTCCAGAGAATAATAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR CCA 90 bp | TTCTTCTACCAGGAAAGACAGAACAGGGGGACCCAATGCGCTCCATaGGCAGTTTGTCTAAATTGTGCTACTTATATATCTGTTAAAATG | + |
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Preference number: 1 (lower is better) Translates to: FFYQERQNRGTQCAP*AVCLNCATYISVKM Trigger: CATTTTAACAGATATATAAGTAGCACAATTTAGACAAACTGCCCATGGAGCGCATTGGGTCCCCCTGTTCTGTCTTTCCTGGTAGAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR TCA 90 bp | ACTCTCTATTGTGTACCAGTATCTTTAACTAGACTAAGGTCTTTTTaGGAAACAAGAGAGCAGGCCAGATGTCCACTAGAGTTTTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: TLYCVPVSLTRLRSF*ETREQARCPLEFCL Trigger: AAGACAAAACTCTAGTGGACATCTGGCCTGCTCTCTTGTTTCTCAAAAAGACCTTAGTCTAGTTAAAGATACTGGTACACAATAGAGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR TCA 90 bp | TTTCTTCATTGTAGGAAGTGTTATTGTATCATAAACTCTGCAGTGTaGCAAGTGTTAACACAGGTTTACTTGCAGAACATACGGTTACTA | + |
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Preference number: 1 (lower is better) Translates to: FLHCRKCYCIINSAV*QVLTQVYLQNIRLL Trigger: TAGTAACCGTATGTTCTGCAAGTAAACCTGTGTTAACACTTGTCACACTGCAGAGTTTATGATACAATAACACTTCCTACAATGAAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
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| 3UTR-3UTR CCA 90 bp | CGCTCAGCTGCCTGCGGGAGCATAGTAGGCATGACCCAGGAAAAGCATGACTCCTGTCTGCTGAGGGGTTaGGAGTGGGGTGTACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: RSAACGSIVGMTQEKHDSCLLRG*EWGVQD Trigger: GTCCTGTACACCCCACTCCCAACCCCTCAGCAGACA...GGAGTCATGCTTTTCCTGGGTCATGCCTACTATGCTCCCGCAGGCAGCTGAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR CAA 90 bp | GAGCCCCCACAATTTGGGCCTGAAGCTGAAAGTTTCCCCTCTATATaGCTGAATGTCCATGCTTCGGTCTCGCTCAGCTGCCTGCGGGAG | + |
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Preference number: 2 (lower is better) Translates to: EPPQFGPEAESFPSI*LNVHASVSLSCLRE Trigger: CTCCCGCAGGCAGCTGAGCGAGACCGAAGCATGGACATTCAGCAATATAGAGGGGAAACTTTCAGCTTCAGGCCCAAATTGTGGGGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTCACCTGCTGTTAACTCTCCAACTGCAGGTTCTCTAAGTCCCGGGCAAAACTGTCTGCTGAGGGGTTaGGAGTGGGGTGTACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LSPAVNSPTAGSLSPGQNCLLRG*EWGVQD Trigger: GTCCTGTACACCCCACTCCCAACCCCTCAGCAGACA...GTTTTGCCCGGGACTTAGAGAACCTGCAGTTGGAGAGTTAACAGCAGGTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCCTCTCACCTGCTGTTAACTCTCCAACTGCAGGTTCTCTAAGTCCCGGGATTGCTGAATGTCCATaGTTCGGTCTCGCTCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LCLSPAVNSPTAGSLSPGIAECP*FGLAQL Trigger: CAGCTGAGCGAGACCGAAGCATGGACATTCAGCAAT...CCCGGGACTTAGAGAACCTGCAGTTGGAGAGTTAACAGCAGGTGAGAGGCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR GCA 90 bp | GGCAGAGCCCAAGGCGGATGGAGGTTAAGACTCCAGGAAGGTGAGGGAAGCCAGTGTCAAAGAGAGATGTaGAAGCCAGTAGCTCATACT | + |
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Preference number: 2 (lower is better) Translates to: GRAQGGWRLRLQEGEGSQCQREM*KPVAHT Trigger: AGTATGAGCTACTGGCTTGCACATCTCTCTTTGACA...CTGGCTTCCCTCACCTTCCTGGAGTCTTAACCTCCATCCGCCTTGGGCTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
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| 3UTR-3UTR CCA 90 bp | GGAACTGGGGTATTCTTAGGTACCTCTGACATTGTAGCAGCTCCTTCAAAGGGTGAAGTTTGGCAGCAGTaGCAGCGGCACGCTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: GTGVFLGTSDIVAAPSKGEVWQQ*QRHAER Trigger: CCTTTCAGCGTGCCGCTGCCACTGCTGCCAAACTTC...ACCCTTTGAAGGAGCTGCTACAATGTCAGAGGTACCTAAGAATACCCCAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR CAA 90 bp | CTGAAGGCACCACCCACACTTATGACATTTTTCACTCCAAAGCAGTaGAAGTTTGGCAGCAGTGGCAGCGGCACGCTGAAAGGGAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LKAPPTLMTFFTPKQ*KFGSSGSGTLKGKE Trigger: CTCTTTCCCTTTCAGCGTGCCGCTGCCACTGCTGCCAAACTTCAACTGCTTTGGAGTGAAAAATGTCATAAGTGTGGGTGGTGCCTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGGAGGCAGGAAGGTTAAAGGAACAGAGGATGCACTTGGGAAACGAGACCATGTGAAGGCTCCTCTGTaGCTCTCACCTGCTGTTAAC | + |
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Preference number: 2 (lower is better) Translates to: TGGRKVKGTEDALGKRDHVKAPL*LSPAVN Trigger: GTTAACAGCAGGTGAGAGGCACAGAGGAGCCTTCAC...ATGGTCTCGTTTCCCAAGTGCATCCTCTGTTCCTTTAACCTTCCTGCCTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR CAA 90 bp | GGACAGACTGTTCATAGAGGATGGTTTTTGTCTTTGTTCCAGTTCTaGGAGATGACCCGGGAAGTGAAGGCTCCTCTGTGCCTCTCACCT | + |
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Preference number: 2 (lower is better) Translates to: GQTVHRGWFLSLFQF*EMTREVKAPLCLSP Trigger: AGGTGAGAGGCACAGAGGAGCCTTCACTTCCCGGGTCATCTCCAAGAACTGGAACAAAGACAAAAACCATCCTCTATGAACAGTCTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTCACCTGCTGTTAACTCTCCAACTGCAGGTTCTCTAAGTCCCGGGCAAAACGACCCAGGAAAAGCATaGCTCCTTATGAGTAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LSPAVNSPTAGSLSPGQNDPGKA*LLMSRS Trigger: AGACCTACTCATAAGGAGTCATGCTTTTCCTGGGTC...GTTTTGCCCGGGACTTAGAGAACCTGCAGTTGGAGAGTTAACAGCAGGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR TCA 90 bp | CATGCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTTCACTCCAAAGCAGTTaGAGTTTGGCAGCAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: HAPVCPSTKQKTFRGTFLSLQSS*SLAAVA Trigger: TGCCACTGCTGCCAAACTTCAACTGCTTTGGAGTGA...AAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR CAA 90 bp | AAAGAGTGGTGGGGACAGACTGTTCATAGAGGATGGTTTTTGTCTTaGTTCCAGTTCTTGGAGATGACCCGGGAAGTGAAGGCTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KEWWGQTVHRGWFLS*FQFLEMTREVKAPL Trigger: CAGAGGAGCCTTCACTTCCCGGGTCATCTCCAAGAACTGGAACAAAGACAAAAACCATCCTCTATGAACAGTCTGTCCCCACCACTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR CCA 90 bp | GACACTCAGGGTCCATTACTACCTCACACTTTTCACTATTCTGTGTTTGCATCACTGAGGGGTTGGGAGTaGGGTGTACAGGACCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: DTQGPLLPHTFHYSVFASLRGWE*GVQDQE Trigger: TTCCTGGTCCTGTACACCCCACTCCCAACCCCTCAG...TGATGCAAACACAGAATAGTGAAAAGTGTGAGGTAGTAATGGACCCTGAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR CCA 90 bp | GCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTGTTCTGAAAGGGAAAGAGTaGTGGGGACAGACTGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: APVCPSTKQKTFRGTFLVLKGKE*WGQTVH Trigger: ATGAACAGTCTGTCCCCACCACTCTTTCCCTTTCAG...AACAAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR CAA 90 bp | AAGGTTAAAGGAACAGAGGATGCACTTGGGAAACGAGACCATCACTaGAACAACAGCGACACACTGAAGGCACCACCCACACTTATGACA | + |
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Preference number: 2 (lower is better) Translates to: KVKGTEDALGKRDHH*NNSDTLKAPPTLMT Trigger: TGTCATAAGTGTGGGTGGTGCCTTCAGTGTGTCGCTGTTGTTCAAGTGATGGTCTCGTTTCCCAAGTGCATCCTCTGTTCCTTTAACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR TCA 90 bp | AGCACTCTGGCACACTCCTCTTCGTGTGCCCATCCTTTTTCTTCTACCAGGAAAAAGCATGACTCCTTATaGGTAGGTCTGTGGTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: STLAHSSSCAHPFSSTRKKHDSL*VGLWLV Trigger: AACCAACCACAGACCTACTCATAAGGAGTCATGCTT...TTTCCTGGTAGAAGAAAAAGGATGGGCACACGAAGAGGAGTGTGCCAGAGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR CCA 90 bp | CTACCTCACACTTTTCACTATTCTGTGTTTGCATCACTTCTTGGGACAAGGAAACTGAGGGGTTGGGAGTaGGGTGTACAGGACCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LPHTFHYSVFASLLGTRKLRGWE*GVQDQE Trigger: TTCCTGGTCCTGTACACCCCACTCCCAACCCCTCAG...TTTCCTTGTCCCAAGAAGTGATGCAAACACAGAATAGTGAAAAGTGTGAGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR TCA 90 bp | AGCGACACACTGAAGGCACCACCCACACTTATGACATTTTTCACTCCAAAGCAGGAAATGCTTGTGACATaGGCAAATTCCTTCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SDTLKAPPTLMTFFTPKQEMLVT*ANSFPS Trigger: GCTTGGGAAGGAATTTGCTCATGTCACAAGCATTTC...CTGCTTTGGAGTGAAAAATGTCATAAGTGTGGGTGGTGCCTTCAGTGTGTCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR TCA 90 bp | AGCGACACACTGAAGGCACCACCCACACTTATGACATTTTTCACTCCAAAGCAGAATGTTCCATCAGTGTaGCACTCAGGGTCCATTACT | + |
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Preference number: 2 (lower is better) Translates to: SDTLKAPPTLMTFFTPKQNVPSV*HSGSIT Trigger: AGTAATGGACCCTGAGTGTCACACTGATGGAACATT...CTGCTTTGGAGTGAAAAATGTCATAAGTGTGGGTGGTGCCTTCAGTGTGTCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR CCA 90 bp | GCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTGTTGTTTGCATCACTTCTTaGGACAAGGAAATGCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: APVCPSTKQKTFRGTFLVVCITS*DKEMLV Trigger: CACAAGCATTTCCTTGTCCCAAGAAGTGATGCAAAC...AACAAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR TCA 90 bp | AACCAATCTTTAACGCAACTTTGGGAGAGTCCAGGTAAGAAAGGATGGCATGAGGACCCAGGAAAAGCATaGCTCCTTATGAGTAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: NQSLTQLWESPGKKGWHEDPGKA*LLMSRS Trigger: AGACCTACTCATAAGGAGTCATGCTTTTCCTGGGTC...CTCATGCCATCCTTTCTTACCTGGACTCTCCCAAAGTTGCGTTAAAGATTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR TCA 90 bp | CCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTGCCAAATTCGAAATGCTTGTGACATaGGCAAATTCCTTCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: PMLQMGHSPGKIKDIAKFEMLVT*ANSFPS Trigger: GCTTGGGAAGGAATTTGCTCATGTCACAAGCATTTC...GAATTTGGCAATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTCACCTGCTGTTAACTCTCCAACTGCAGGTTCTCTAAGTCCCGGGCAAAACAGAAGACTTACTTTGTaGGCTTTTTGCTTTCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: LSPAVNSPTAGSLSPGQNRRLTL*AFCFQL Trigger: AAGCTGAAAGCAAAAAGCTCACAAAGTAAGTCTTCT...GTTTTGCCCGGGACTTAGAGAACCTGCAGTTGGAGAGTTAACAGCAGGTGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR GCA 90 bp | CTAAACAAAAGACTTTCAGGGGGACCTTCCTTGTTGGGATCCAATGGCTGTGGCTCACTATTCTGTGTTTaGATCACTTCTTGGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: LNKRLSGGPSLLGSNGCGSLFCV*ITSWDK Trigger: CTTGTCCCAAGAAGTGATGCAAACACAGAATAGTGA...GCCACAGCCATTGGATCCCAACAAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR CCA 90 bp | AAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATGCTGTGTGGGAGGGTGGGAACTaGGGTATTCTTAGGTACCTC | + |
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Preference number: 2 (lower is better) Translates to: KFFLLAWNMETIWYADAVWEGGN*GILRYL Trigger: GAGGTACCTAAGAATACCCCAGTTCCCACCCTCCCA...CACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGCCAAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATCCAGGTAAGAAAGGATaGCATGAGGGTGCCCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: IAKFFLLAWNMETIWYADPGKKG*HEGAPG Trigger: TCCAGGGGCACCCTCATGCCATCCTTTCTTACCTGG...ATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTTGGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGGATGCACTTGGGAAACGAGACCATCACTTGAACAACAGCGACACACTGAATCACTATTCTGTGTTTaGATCACTTCTTGGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: RGCTWETRPSLEQQRHTESLFCV*ITSWDK Trigger: CTTGTCCCAAGAAGTGATGCAAACACAGAATAGTGA...TTCAGTGTGTCGCTGTTGTTCAAGTGATGGTCTCGTTTCCCAAGTGCATCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR CCA 90 bp | AAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATGCTGTGCTTGTTGGGATCCAATaGCTGTGGCTGATGGAACCA | + |
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Preference number: 2 (lower is better) Translates to: KFFLLAWNMETIWYADAVLVGIQ*LWLMEP Trigger: TGGTTCCATCAGCCACAGCCATTGGATCCCAACAAG...CACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| 3UTR-3UTR GCA 90 bp | ATTGTAAGGTTTATCTGCCTTCCCAAGAGGAAGGCAAAGAATAAACAGATATTCGTGAAGGCTCCTCTGTaGCTCTCACCTGCTGTTAAC | + |
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Preference number: 2 (lower is better) Translates to: IVRFICLPKRKAKNKQIFVKAPL*LSPAVN Trigger: GTTAACAGCAGGTGAGAGGCACAGAGGAGCCTTCAC...GAATATCTGTTTATTCTTTGCCTTCCTCTTGGGAAGGCAGATAAACCTTACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGCCAAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATCTTGTTGGGATCCAATaGCTGTGGCTGATGGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: IAKFFLLAWNMETIWYADLVGIQ*LWLMEP Trigger: TGGTTCCATCAGCCACAGCCATTGGATCCCAACAAG...ATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTTGGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTCTGTGTTTGCATCACTTCTTGGGACAAGGAAATGCTTGTGACATGAGCAAAACACTCCTCTTCGTGTaGCCATCCTTTTTCTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: ILCLHHFLGQGNACDMSKTLLFV*PSFFFY Trigger: GTAGAAGAAAAAGGATGGGCACACGAAGAGGAGTGT...TTTGCTCATGTCACAAGCATTTCCTTGTCCCAAGAAGTGATGCAAACACAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CCA 90 bp | CACTTTTCACTATTCTGTGTTTGCATCACTTCTTGGGACAAGGAAATGCTTGTGACCCAATGCGCTCCATaGGCAGTTTGTCTAAATTGT | + |
|
Preference number: 2 (lower is better) Translates to: HFSLFCVCITSWDKEMLVTQCAP*AVCLNC Trigger: ACAATTTAGACAAACTGCCCATGGAGCGCATTGGGT...CACAAGCATTTCCTTGTCCCAAGAAGTGATGCAAACACAGAATAGTGAAAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CCA 90 bp | AAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATGCTGTGTCACTGCCAACATCATaGTCTTCCAGGGAGTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: KFFLLAWNMETIWYADAVSLPTS*SSREFF Trigger: AAAGAACTCCCTGGAAGACCATGATGTTGGCAGTGA...CACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTAAGGTTTATCTGCCTTCCCAAGAGGAAGGCAAAGAATAAACAGATATTCTCACTGCCAACATCATaGTCTTCCAGGGAGTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: IVRFICLPKRKAKNKQIFSLPTS*SSREFF Trigger: AAAGAACTCCCTGGAAGACCATGATGTTGGCAGTGA...GAATATCTGTTTATTCTTTGCCTTCCTCTTGGGAAGGCAGATAAACCTTACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTAAGGTTTATCTGCCTTCCCAAGAGGAAGGCAAAGAATAAACAGATATTCAGGGTGTTAATTGTCTaGGCTCACCTACAAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: IVRFICLPKRKAKNKQIFRVLIV*AHLQRK Trigger: TTTCCTTTGTAGGTGAGCCCAGACAATTAACACCCT...GAATATCTGTTTATTCTTTGCCTTCCTCTTGGGAAGGCAGATAAACCTTACAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTGCCAAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATATAAAAACCTATCACTaGCAACATCATGGTCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: IAKFFLLAWNMETIWYADIKTYH*QHHGLP Trigger: TGGAAGACCATGATGTTGGCAGTGATAGGTTTTTAT...ATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTTGGCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTAAGGTTTATCTGCCTTCCCAAGAGGAAGGCAAAGAATAAACAGATATTCTGCTTTCAGCTTCAATaGTATGCAATGTTCCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: IVRFICLPKRKAKNKQIFCFQLQ*YAMFHQ Trigger: CTGATGGAACATTGCATACCATTGAAGCTGAAAGCA...GAATATCTGTTTATTCTTTGCCTTCCTCTTGGGAAGGCAGATAAACCTTACAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| 3UTR TCA 72 bp | GTTGGTTCCTGTAGAACACCCGGAGTGTGTGTCTGCTaGGGGGTTGGGAGTGGGGTGTACAGGACCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VGSCRTPGVCVC*GVGSGVYRTRK Trigger: CTTCCTGGTCCTGTACACCCCACTCCCAACCCCTCAGCAGACACACACTCCGGGTGTTCTACAGGAACCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CCA 72 bp | AAGGATGGCATGAGGGTGCCCCTGGAGGTAATCTGGTaGGAGGGTGGGAACTGGGGTATTCTTAGGTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: KDGMRVPLEVIW*EGGNWGILRYL Trigger: GAGGTACCTAAGAATACCCCAGTTCCCACCCTCCCACCAGATTACCTCCAGGGGCACCCTCATGCCATCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CCA 72 bp | GGCAGCAGTGGCAGCGGCACGCTGAAAGGGAAAGAGTaGTGGGGACAGACTGTTCATAGAGGATGGTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSSGSGTLKGKE*WGQTVHRGWFL Trigger: CAAAAACCATCCTCTATGAACAGTCTGTCCCCACCACTCTTTCCCTTTCAGCGTGCCGCTGCCACTGCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CCA 72 bp | AGAAAGGATGGCATGAGGGTGCCCCTGGAGGTAATCTaGTGGGAGGGTGGGAACTGGGGTATTCTTAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: RKDGMRVPLEVI*WEGGNWGILRY Trigger: GTACCTAAGAATACCCCAGTTCCCACCCTCCCACCAGATTACCTCCAGGGGCACCCTCATGCCATCCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR TCA 72 bp | TTGGGCCTGAAGCTGAAAGTTTCCCCTCTATATTGCTaGATGTCCATGCTTCGGTCTCGCTCAGCTGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LGLKLKVSPLYC*MSMLRSRSAAC Trigger: GCAGGCAGCTGAGCGAGACCGAAGCATGGACATTCAGCAATATAGAGGGGAAACTTTCAGCTTCAGGCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR GCA 72 bp | ATATTGCTGAATGTCCATGCTTCGGTCTCGCTCAGCTaGCTGCGGGAGCATAGTAGGCATGACCCAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ILLNVHASVSLS*LREHSRHDPGK Trigger: TTTTCCTGGGTCATGCCTACTATGCTCCCGCAGGCAGCTGAGCGAGACCGAAGCATGGACATTCAGCAATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CCA 72 bp | ATTTTTCACTCCAAAGCAGTTGAAGTTTGGCAGCAGTaGCAGCGGCACGCTGAAAGGGAAAGAGTGGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: IFHSKAVEVWQQ*QRHAERERVVG Trigger: CCCCACCACTCTTTCCCTTTCAGCGTGCCGCTGCCACTGCTGCCAAACTTCAACTGCTTTGGAGTGAAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTGCCAAATTCGTGTCTGCTGAGGGGTaGGGAGTGGGGTGTACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PMLQMGHSPGKIKDIAKFVSAEG*GVGCTG Trigger: TCCTGTACACCCCACTCCCAACCCCTCAGCAGACAC...GAATTTGGCAATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTCCCCTCTATATTGCTGAATGTCCATGCTTCGGTCTCGCTCAGCTGCCTGTTTTGCCTCTTTCAGTaGAGTGTGGTCTCCAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SFPSILLNVHASVSLSCLFCLFQ*SVVSRV Trigger: CACCCTGGAGACCACACTCAACTGAAAGAGGCAAAA...CAGGCAGCTGAGCGAGACCGAAGCATGGACATTCAGCAATATAGAGGGGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | AACCAATCTTTAACGCAACTTTGGGAGAGTCCAGGTAAGAAAGGATGGCATGAGGTGTCTGCTGAGGGGTaGGGAGTGGGGTGTACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NQSLTQLWESPGKKGWHEVSAEG*GVGCTG Trigger: TCCTGTACACCCCACTCCCAACCCCTCAGCAGACAC...CTCATGCCATCCTTTCTTACCTGGACTCTCCCAAAGTTGCGTTAAAGATTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCACCTGCTGTTAACTCTCCAACTGCAGGTTCTCTAAGTCCCGGGCAAAACATGAGCCCCCACAATTaGGGCCTGAAGCTGAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LSPAVNSPTAGSLSPGQNMSPHN*GLKLKV Trigger: AACTTTCAGCTTCAGGCCCAAATTGTGGGGGCTCAT...GTTTTGCCCGGGACTTAGAGAACCTGCAGTTGGAGAGTTAACAGCAGGTGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR TCA 72 bp | CTTGGAACATGGAAACTATCTGGTATGCTGATGCTGTaGTGCCGAGAGCCCAGGCAGCAGAACATCACCACA | + |
|
Preference number: 3 (lower is better) Translates to: LGTWKLSGMLML*CREPRQQNITT Trigger: TGTGGTGATGTTCTGCTGCCTGGGCTCTCGGCATCACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR TCA 72 bp | CCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTaGTGCTGTGATGCCGAGAGCCCAGGCAGCAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PTCLEHGNYLVC*CCDAESPGSRT Trigger: TGTTCTGCTGCCTGGGCTCTCGGCATCACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | CTAAACAAAAGACTTTCAGGGGGACCTTCCTTGTTGGGATCCAATGGCTGTGGCTTTTGCCTCTTTCAGTaGAGTGTGGTCTCCAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LNKRLSGGPSLLGSNGCGFCLFQ*SVVSRV Trigger: CACCCTGGAGACCACACTCAACTGAAAGAGGCAAAA...GCCACAGCCATTGGATCCCAACAAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR GCA 72 bp | TTCCTTCCCAAGCACTCTGGCACACTCCTCTTCGTGTaGCCATCCTTTTTCTTCTACCAGGAAAGACAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: FLPKHSGTLLFV*PSFFFYQERQN Trigger: GTTCTGTCTTTCCTGGTAGAAGAAAAAGGATGGGCACACGAAGAGGAGTGTGCCAGAGTGCTTGGGAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | GAAACTATCTGGTATGCTGATGCTGTGATGCCGAGAGCCCAGGCAGCAGAACATCGCTCCATGGGCAGTTaGTCTAAATTGTGCTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: ETIWYADAVMPRAQAAEHRSMGS*SKLCYL Trigger: TAAGTAGCACAATTTAGACAAACTGCCCATGGAGCG...ATGTTCTGCTGCCTGGGCTCTCGGCATCACAGCATCAGCATACCAGATAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCAGTTCTTGGAGATGACCCGGGAAGTGAAGGCTCCTCTGTGCCTCTCACCTACTTTGTGAGCTTTTaGCTTTCAGCTTCAATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: VPVLGDDPGSEGSSVPLTYFVSF*LSASMV Trigger: TACCATTGAAGCTGAAAGCAAAAAGCTCACAAAGTA...GGTGAGAGGCACAGAGGAGCCTTCACTTCCCGGGTCATCTCCAAGAACTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | AAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATGCTGTGGGGGGACCTTCCTTGTaGGGATCCAATGGCTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KFFLLAWNMETIWYADAVGGPSL*GSNGCG Trigger: GCCACAGCCATTGGATCCCAACAAGGAAGGTCCCCC...CACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR TCA 72 bp | ATAGTAGGCATGACCCAGGAAAAGCATGACTCCTTATaGGTAGGTCTGTGGTTGGTTCCTGTAGAACACCCG | + |
|
Preference number: 3 (lower is better) Translates to: IVGMTQEKHDSL*VGLWLVPVEHP Trigger: CGGGTGTTCTACAGGAACCAACCACAGACCTACTCATAAGGAGTCATGCTTTTCCTGGGTCATGCCTACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CCA 72 bp | AAGACTTTCAGGGGGACCTTCCTTGTTGGGATCCAATaGCTGTGGCTGATGGAACCAATCTTTAACGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: KTFRGTFLVGIQ*LWLMEPIFNAT Trigger: AGTTGCGTTAAAGATTGGTTCCATCAGCCACAGCCATTGGATCCCAACAAGGAAGGTCCCCCTGAAAGTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGATTCCCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTTTCACTCCAAAGCAGTaGAAGTTTGGCAGCAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VRFPMLQMGHSPGKIKDIFTPKQ*KFGSSG Trigger: GCCACTGCTGCCAAACTTCAACTGCTTTGGAGTGAA...AATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGGGAATCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | GAAACTATCTGGTATGCTGATGCTGTGATGCCGAGAGCCCAGGCAGCAGAACATTTCACTATTCTGTGTTaGCATCACTTCTTGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: ETIWYADAVMPRAQAAEHFTILC*HHFLGQ Trigger: TTGTCCCAAGAAGTGATGCAAACACAGAATAGTGAA...ATGTTCTGCTGCCTGGGCTCTCGGCATCACAGCATCAGCATACCAGATAGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR TCA 72 bp | GTGTTTGCATCACTTCTTGGGACAAGGAAATGCTTGTaGCATGAGCAAATTCCTTCCCAAGCACTCTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VFASLLGTRKCL*HEQIPSQALWH Trigger: GTGCCAGAGTGCTTGGGAAGGAATTTGCTCATGTCACAAGCATTTCCTTGTCCCAAGAAGTGATGCAAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR GCA 72 bp | GTGGCCAGACTCTGTCTTGGAAGTCAAAATTACAATTaGAGACCAAGGAGCCACGTCTACTTGGATGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: VARLCLGSQNYN*RPRSHVYLDEV Trigger: GACTTCATCCAAGTAGACGTGGCTCCTTGGTCTGCAATTGTAATTTTGACTTCCAAGACAGAGTCTGGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| 3UTR GCA 72 bp | TCCCAAAGTCAAACAGGAAGCAACGAGCAAGCACTGTaGGAGCTGTCTATGACCGAATTACTTGGGAAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SQSQTGSNEQAL*ELSMTELLGKY Trigger: ATACTTCCCAAGTAATTCGGTCATAGACAGCTCGCACAGTGCTTGCTCGTTGCTTCCTGTTTGACTTTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| 3UTR CCA 72 bp | GGGAAAGAGTGGTGGGGACAGACTGTTCATAGAGGATaGTTTTTGTCTTTGTTCCAGTTCTTGGAGATGACC | + |
|
Preference number: 3 (lower is better) Translates to: GKEWWGQTVHRG*FLSLFQFLEMT Trigger: GGTCATCTCCAAGAACTGGAACAAAGACAAAAACCATCCTCTATGAACAGTCTGTCCCCACCACTCTTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CCA 72 bp | AAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTaGTATGCTGATGCTGTGATGCCGAGAGCCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KFFLLAWNMETI*YADAVMPRAQA Trigger: TGCCTGGGCTCTCGGCATCACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR GCA 72 bp | TCTCTGGACCCCTTGGCCATCATAAAAACCTATCACTaGCAACATCATGGTCTTCCAGGGAGTTCTTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLDPLAIIKTYH*QHHGLPGSSLE Trigger: TTCTAAAGAACTCCCTGGAAGACCATGATGTTGGCAGTGATAGGTTTTTATGATGGCCAAGGGGTCCAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR GCA 72 bp | CCGAGAGCCCAGGCAGCAGAACATCACCACATGGGATaGTCCAATTCTATTTCACTAGATTTTTACACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PRAQAAEHHHMG*SNSISLDFYTK Trigger: TTTGGTGTAAAAATCTAGTGAAATAGAATTGGAGCATCCCATGTGGTGATGTTCTGCTGCCTGGGCTCTCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR GCA 72 bp | GGCGAGGACATAATTAACTCATGTCAAAGAGAGATGTaGAAGCCAGTAGCTCATACTGCTCTATCGAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GEDIINSCQREM*KPVAHTALSRV Trigger: CACTCTCGATAGAGCAGTATGAGCTACTGGCTTGCACATCTCTCTTTGACATGAGTTAATTATGTCCTCGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | AACCAATCTTTAACGCAACTTTGGGAGAGTCCAGGTAAGAAAGGATGGCATGAGCGCTCCATGGGCAGTTaGTCTAAATTGTGCTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: NQSLTQLWESPGKKGWHERSMGS*SKLCYL Trigger: TAAGTAGCACAATTTAGACAAACTGCCCATGGAGCG...CTCATGCCATCCTTTCTTACCTGGACTCTCCCAAAGTTGCGTTAAAGATTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTGCCAAATTCTGTTTGCATCACTTCTaGGGACAAGGAAATGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PMLQMGHSPGKIKDIAKFCLHHF*GQGNAC Trigger: ACAAGCATTTCCTTGTCCCAAGAAGTGATGCAAACA...GAATTTGGCAATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | AAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATGCTGTGTTCACTCCAAAGCAGTaGAAGTTTGGCAGCAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KFFLLAWNMETIWYADAVFTPKQ*KFGSSG Trigger: GCCACTGCTGCCAAACTTCAACTGCTTTGGAGTGAA...CACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CCA 72 bp | CTTGGCCATCATAAAAACCTATCACTGCCAACATCATaGTCTTCCAGGGAGTTCTTTAGAATGTTCTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LGHHKNLSLPTS*SSREFFRMFSP Trigger: AGGGGAGAACATTCTAAAGAACTCCCTGGAAGACCATGATGTTGGCAGTGATAGGTTTTTATGATGGCCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTGCCAAATTCTTCACTATTCTGTGTTaGCATCACTTCTTGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: PMLQMGHSPGKIKDIAKFFTILC*HHFLGQ Trigger: TTGTCCCAAGAAGTGATGCAAACACAGAATAGTGAA...GAATTTGGCAATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR GCA 72 bp | TCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTaGCAAATTCTTCCTACTTGCTTGGAACATGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SDGTQPWKDQRY*QILPTCLEHGN Trigger: GTTTCCATGTTCCAAGCAAGTAGGAAGAATTTGGCAATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTGCCAAATTCTACTTTGTGAGCTTTTaGCTTTCAGCTTCAATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: PMLQMGHSPGKIKDIAKFYFVSF*LSASMV Trigger: TACCATTGAAGCTGAAAGCAAAAAGCTCACAAAGTA...GAATTTGGCAATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCCAAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATCTAAACAAAACTCTCTaGCCTCTCCATGCACCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: IAKFFLLAWNMETIWYADLNKTL*PLHAPV Trigger: GACAGGTGCATGGAGAGGCAAGAGAGTTTTGTTTAG...ATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTTGGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CCA 72 bp | AAGATCAAAGATATTGCCAAATTCTTCCTACTTGCTTaGAACATGGAAACTATCTGGTATGCTGATGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: KIKDIAKFFLLA*NMETIWYADAV Trigger: CACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTTGGCAATATCTTTGATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CCA 72 bp | AAAATTACAATTGCAGACCAAGGAGCCACGTCTACTTaGATGAAGTCATCTTCAAAAAGAAGGATGAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: KITIADQGATST*MKSSSKRRMSK Trigger: CTTACTCATCCTTCTTTTTGAAGATGACTTCATCCAAGTAGACGTGGCTCCTTGGTCTGCAATTGTAATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTAAGGTTTATCTGCCTTCCCAAGAGGAAGGCAAAGAATAAACAGATATTCATTCTTCCTACTTGCTaGGAACATGGAAACTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: IVRFICLPKRKAKNKQIFILPTC*EHGNYL Trigger: CAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAAT...GAATATCTGTTTATTCTTTGCCTTCCTCTTGGGAAGGCAGATAAACCTTACAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| 3UTR TCA 72 bp | TGTAGGAAGTGTTATTGTATCATAAACTCTGCAGTGTaGCAAGTGTTAACACAGGTTTACTTGCAGAACATA | + |
|
Preference number: 3 (lower is better) Translates to: CRKCYCIINSAV*QVLTQVYLQNI Trigger: TATGTTCTGCAAGTAAACCTGTGTTAACACTTGTCACACTGCAGAGTTTATGATACAATAACACTTCCTACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGCCCAAGGCGGATGGAGGTTAAGACTCCAGGAAGGTGAGGGAAGCCAGCCCAGTTGCGCTAGCTaGCCGTGCCCAGATCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRAQGGWRLRLQEGEGSQPSCAS*PCPDRS Trigger: GGAGCGATCTGGGCACGGGCAGCTAGCGCAACTGGG...CTGGCTTCCCTCACCTTCCTGGAGTCTTAACCTCCATCCGCCTTGGGCTCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGCCCAAGGCGGATGGAGGTTAAGACTCCAGGAAGGTGAGGGAAGCCAGTCCCTTTGGGGCCGGTaGGCTTTCTCCAGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRAQGGWRLRLQEGEGSQSLWGR*AFSSPS Trigger: GCTGGGGCTGGAGAAAGCGCACCGGCCCCAAAGGGA...CTGGCTTCCCTCACCTTCCTGGAGTCTTAACCTCCATCCGCCTTGGGCTCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGTTCTTGGAGATGACCCGGGAAGTGAAGGCTCCTCTGTGCCTCTCACCTGCGCTAGCTGCCCGTaGCCAGATCGCTCCTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPVLGDDPGSEGSSVPLTCASCP*PDRSCA Trigger: GGCGCAGGAGCGATCTGGGCACGGGCAGCTAGCGCA...GGTGAGAGGCACAGAGGAGCCTTCACTTCCCGGGTCATCTCCAAGAACTGGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGTTCTTGGAGATGACCCGGGAAGTGAAGGCTCCTCTGTGCCTCTCACCCCCAGTTGCGCTAGCTaGCCGTGCCCAGATCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPVLGDDPGSEGSSVPLTPSCAS*PCPDRS Trigger: GGAGCGATCTGGGCACGGGCAGCTAGCGCAACTGGG...GGTGAGAGGCACAGAGGAGCCTTCACTTCCCGGGTCATCTCCAAGAACTGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGTTCTTGGAGATGACCCGGGAAGTGAAGGCTCCTCTGTGCCTCTCACCGTGGGTGGGAAGTGCTaGGTGCGAGTCCCCAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPVLGDDPGSEGSSVPLTVGGKC*VRVPKG Trigger: CCCCTTGGGGACTCGCACCCAGCACTTCCCACCCAC...GGTGAGAGGCACAGAGGAGCCTTCACTTCCCGGGTCATCTCCAAGAACTGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | GTTCCAGTTCTTGGAGATGACCCGGGAAGTGAAGGCTCCTCTGTGCCTCTCACCGGGCACACAGCTCGGTaGGGAAGCAGCCGAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPVLGDDPGSEGSSVPLTGHTAR*GSSREA Trigger: TGCTTCTCGGCTGCTTCCTCACCGAGCTGTGTGCCC...GGTGAGAGGCACAGAGGAGCCTTCACTTCCCGGGTCATCTCCAAGAACTGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGCCCAAGGCGGATGGAGGTTAAGACTCCAGGAAGGTGAGGGAAGCCAGTCCTTGGTGGGGTCGTaGAAGGGGTCATCCTTACGC | + |
|
Preference number: 4 (lower is better) Translates to: GRAQGGWRLRLQEGEGSQSLVGS*KGSSLR Trigger: GCGTAAGGATGACCCCTTGCACGACCCCACCAAGGA...CTGGCTTCCCTCACCTTCCTGGAGTCTTAACCTCCATCCGCCTTGGGCTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGCCCAAGGCGGATGGAGGTTAAGACTCCAGGAAGGTGAGGGAAGCCAGGTTGCAGTGGCCCTGTaGCCTCATGACATCCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRAQGGWRLRLQEGEGSQVAVAL*PHDIRK Trigger: CTTGCGGATGTCATGAGGCCACAGGGCCACTGCAAC...CTGGCTTCCCTCACCTTCCTGGAGTCTTAACCTCCATCCGCCTTGGGCTCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTCCCCTCTATATTGCTGAATGTCCATGCTTCGGTCTCGCTCAGCTGCCTGAGCGGTTGCCCCCTGTaGGCAGCAGTACGCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFPSILLNVHASVSLSCLSGCPL*AAVRRP Trigger: TGGGCGGCGTACTGCTGCTCACAGGGGGCAACCGCT...CAGGCAGCTGAGCGAGACCGAAGCATGGACATTCAGCAATATAGAGGGGAAACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | CGCTCAGCTGCCTGCGGGAGCATAGTAGGCATGACCCAGGAAAAGCATGACTCCCAAGCTTGCCCTTGTTaGCATAAGCCTGCCGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSAACGSIVGMTQEKHDSQACPC*HKPAAG Trigger: TCCGGCGGCAGGCTTATGGCAACAAGGGCAAGCTTG...GGAGTCATGCTTTTCCTGGGTCATGCCTACTATGCTCCCGCAGGCAGCTGAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | AAGCACTCTGGCACACTCCTCTTCGTGTGCCCATCCTTTTTCTTCTACCAGGAAAGCGGTTGCCCCCTGTaGGCAGCAGTACGCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHSGTLLFVCPSFFFYQESGCPL*AAVRRP Trigger: TGGGCGGCGTACTGCTGCTCACAGGGGGCAACCGCT...TTCCTGGTAGAAGAAAAAGGATGGGCACACGAAGAGGAGTGTGCCAGAGTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | CGCTCAGCTGCCTGCGGGAGCATAGTAGGCATGACCCAGGAAAAGCATGACTCCAGGAGGCGTACTTGTTaGGCTCTTTGCCTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSAACGSIVGMTQEKHDSRRRTC*ALCLEA Trigger: AGCCTCCAGGCAAAGAGCTCAACAAGTACGCCTCCT...GGAGTCATGCTTTTCCTGGGTCATGCCTACTATGCTCCCGCAGGCAGCTGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | CATGCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTTGCGCTAGCTGCCCGTaGCCAGATCGCTCCTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HAPVCPSTKQKTFRGTFLCASCP*PDRSCA Trigger: GGCGCAGGAGCGATCTGGGCACGGGCAGCTAGCGCA...AAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCACCTGCTGTTAACTCTCCAACTGCAGGTTCTCTAAGTCCCGGGCAAAACAGTACGCCGCCCAGTTaGGCTAGCTGCCCGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPAVNSPTAGSLSPGQNSTPPS*ASCPCP Trigger: TGGGCACGGGCAGCTAGCGCAACTGGGCGGCGTACT...GTTTTGCCCGGGACTTAGAGAACCTGCAGTTGGAGAGTTAACAGCAGGTGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | GAAACTATCTGGTATGCTGATGCTGTGATGCCGAGAGCCCAGGCAGCAGAACATTGCCGCCGGAGAGACTaGTCACTGGGGTCCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETIWYADAVMPRAQAAEHCRRRD*SLGSQV Trigger: GACCTGGGACCCCAGTGACCAGTCTCTCCGGCGGCA...ATGTTCTGCTGCCTGGGCTCTCGGCATCACAGCATCAGCATACCAGATAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | AAGCACTCTGGCACACTCCTCTTCGTGTGCCCATCCTTTTTCTTCTACCAGGAAGGCCCTGTGGCCTCATaGCATCCGCAAGGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KHSGTLLFVCPSFFFYQEGPVAS*HPQGLW Trigger: CCAGAGCCCTTGCGGATGTCATGAGGCCACAGGGCC...TTCCTGGTAGAAGAAAAAGGATGGGCACACGAAGAGGAGTGTGCCAGAGTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | ATATTGCTGAATGTCCATGCTTCGGTCTCGCTCAGCTGCCTGCGGGAGCATAGTCTGTCCATTCTGCTGTaGAGGCCCGTGCTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLNVHASVSLSCLREHSLSILL*RPVLWA Trigger: AGCCCAGAGCACGGGCCTGCACAGCAGAATGGACAG...ACTATGCTCCCGCAGGCAGCTGAGCGAGACCGAAGCATGGACATTCAGCAATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | CGCTCAGCTGCCTGCGGGAGCATAGTAGGCATGACCCAGGAAAAGCATGACTCCAGCCTGACTCAGCTATaGCAAGCTTGCCCTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSAACGSIVGMTQEKHDSSLTQL*QACPCC Trigger: GCAACAAGGGCAAGCTTGGCATAGCTGAGTCAGGCT...GGAGTCATGCTTTTCCTGGGTCATGCCTACTATGCTCCCGCAGGCAGCTGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGTTCTTGGAGATGACCCGGGAAGTGAAGGCTCCTCTGTGCCTCTCACCTGGTCAGTGTTGCAGTaGCCCTGTGGCCTCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: VPVLGDDPGSEGSSVPLTWSVLQ*PCGLMT Trigger: TGTCATGAGGCCACAGGGCCACTGCAACACTGACCA...GGTGAGAGGCACAGAGGAGCCTTCACTTCCCGGGTCATCTCCAAGAACTGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | GCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTGTTGTGGGTGGGAAGTGCTaGGTGCGAGTCCCCAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: APVCPSTKQKTFRGTFLVVGGKC*VRVPKG Trigger: CCCCTTGGGGACTCGCACCCAGCACTTCCCACCCAC...AACAAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | GCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTGTTGGGCACACAGCTCGGTaGGGAAGCAGCCGAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: APVCPSTKQKTFRGTFLVGHTAR*GSSREA Trigger: TGCTTCTCGGCTGCTTCCTCACCGAGCTGTGTGCCC...AACAAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | AAGCACTCTGGCACACTCCTCTTCGTGTGCCCATCCTTTTTCTTCTACCAGGAACCAGCCCCAGCTTGGTaGAGATGCCCACCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KHSGTLLFVCPSFFFYQEPAPAW*RCPPAP Trigger: TGGTGCTGGTGGGCATCTTCACCAAGCTGGGGCTGG...TTCCTGGTAGAAGAAAAAGGATGGGCACACGAAGAGGAGTGTGCCAGAGTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGCCTCTCACCTGCTGTTAACTCTCCAACTGCAGGTTCTCTAAGTCCCGGGGACTTCTGTCCATTCTaGTGTGCAGGCCCGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLSPAVNSPTAGSLSPGDFCPF*CAGPCS Trigger: AGAGCACGGGCCTGCACAGCAGAATGGACAGAAGTC...CCCGGGACTTAGAGAACCTGCAGTTGGAGAGTTAACAGCAGGTGAGAGGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | CGCTCAGCTGCCTGCGGGAGCATAGTAGGCATGACCCAGGAAAAGCATGACTCCCGTGTTAAGCCAGAGTaGCGTGTCGTAGTTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RSAACGSIVGMTQEKHDSRVKPE*RVVVGT Trigger: TGTACCAACTACGACACGCCACTCTGGCTTAACACG...GGAGTCATGCTTTTCCTGGGTCATGCCTACTATGCTCCCGCAGGCAGCTGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | ATATTGCTGAATGTCCATGCTTCGGTCTCGCTCAGCTGCCTGCGGGAGCATAGTGGTTGGTCTTGTCCTTaGTGGGGTCGTGCAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLNVHASVSLSCLREHSGWSCP*WGRARG Trigger: ACCCCTTGCACGACCCCACCAAGGACAAGACCAACC...ACTATGCTCCCGCAGGCAGCTGAGCGAGACCGAAGCATGGACATTCAGCAATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | CCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTGCCAAATTCTCCCTTTGGGGCCGGTaGGCTTTCTCCAGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PMLQMGHSPGKIKDIAKFSLWGR*AFSSPS Trigger: GCTGGGGCTGGAGAAAGCGCACCGGCCCCAAAGGGA...GAATTTGGCAATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | CTAAACAAAAGACTTTCAGGGGGACCTTCCTTGTTGGGATCCAATGGCTGTGGCCTGTCCATTCTGCTGTaGAGGCCCGTGCTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNKRLSGGPSLLGSNGCGLSILL*RPVLWA Trigger: AGCCCAGAGCACGGGCCTGCACAGCAGAATGGACAG...GCCACAGCCATTGGATCCCAACAAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | GCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTGTTTGTGTGGGTGGGAAGTaGTGGGTGCGAGTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: APVCPSTKQKTFRGTFLVCVGGK*WVRVPK Trigger: CTTGGGGACTCGCACCCAGCACTTCCCACCCACACA...AACAAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | ATATTGCTGAATGTCCATGCTTCGGTCTCGCTCAGCTGCCTGCGGGAGCATAGTAGGTCTCTCTCCATGTaGTCAGTGTTGCAGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILLNVHASVSLSCLREHSRSLSM*SVLQWP Trigger: GGGCCACTGCAACACTGACCACATGGAGAGAGACCT...ACTATGCTCCCGCAGGCAGCTGAGCGAGACCGAAGCATGGACATTCAGCAATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGATTCCCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTTGCCGCCGGAGAGACTaGTCACTGGGGTCCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VRFPMLQMGHSPGKIKDICRRRD*SLGSQV Trigger: GACCTGGGACCCCAGTGACCAGTCTCTCCGGCGGCA...AATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGGGAATCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCACCTGCTGTTAACTCTCCAACTGCAGGTTCTCTAAGTCCCGGGCAAAACTGTGGGTGTCCCATCTaGTGGAGCAGAGGAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPAVNSPTAGSLSPGQNCGCPI*WSRGEV Trigger: CACTTCTCCTCTGCTCCAGCAGATGGGACACCCACA...GTTTTGCCCGGGACTTAGAGAACCTGCAGTTGGAGAGTTAACAGCAGGTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGAGGCAGGAAGGTTAAAGGAACAGAGGATGCACTTGGGAAACGAGACCATCAAGCTTGCCCTTGTTaGCATAAGCCTGCCGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGGRKVKGTEDALGKRDHQACPC*HKPAAG Trigger: TCCGGCGGCAGGCTTATGGCAACAAGGGCAAGCTTG...ATGGTCTCGTTTCCCAAGTGCATCCTCTGTTCCTTTAACCTTCCTGCCTCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | GAAACTATCTGGTATGCTGATGCTGTGATGCCGAGAGCCCAGGCAGCAGAACATATATGGCTGTGTGGGTaGGAAGTGCTGGGTGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ETIWYADAVMPRAQAAEHIWLCG*EVLGAS Trigger: ACTCGCACCCAGCACTTCCCACCCACACAGCCATAT...ATGTTCTGCTGCCTGGGCTCTCGGCATCACAGCATCAGCATACCAGATAGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CAA 72 bp | GGAACAGAGGATGCACTTGGGAAACGAGACCATCACTaGAACAACAGCGACACACTGAAGGCACCACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GTEDALGKRDHH*NNSDTLKAPPT Trigger: TGTGGGTGGTGCCTTCAGTGTGTCGCTGTTGTTCAAGTGATGGTCTCGTTTCCCAAGTGCATCCTCTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | CATGCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTACCCAGGTTGGGGTATaGATGTGGGTGTCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HAPVCPSTKQKTFRGTFLTQVGV*MWVSHL Trigger: CAGATGGGACACCCACATTCATACCCCAACCTGGGT...AAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGAGGCAGGAAGGTTAAAGGAACAGAGGATGCACTTGGGAAACGAGACCATAGGAGGCGTACTTGTTaGGCTCTTTGCCTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGGRKVKGTEDALGKRDHRRRTC*ALCLEA Trigger: AGCCTCCAGGCAAAGAGCTCAACAAGTACGCCTCCT...ATGGTCTCGTTTCCCAAGTGCATCCTCTGTTCCTTTAACCTTCCTGCCTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | CATGCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTCGTAGTTGGTACAGGTaGTCTGGTTCAGTCGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HAPVCPSTKQKTFRGTFLRSWYR*SGSVAA Trigger: AGCGGCGACTGAACCAGAGCACCTGTACCAACTACG...AAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | AAGCACTCTGGCACACTCCTCTTCGTGTGCCCATCCTTTTTCTTCTACCAGGAACGTAGTTGGTACAGGTaGTCTGGTTCAGTCGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KHSGTLLFVCPSFFFYQERSWYR*SGSVAA Trigger: AGCGGCGACTGAACCAGAGCACCTGTACCAACTACG...TTCCTGGTAGAAGAAAAAGGATGGGCACACGAAGAGGAGTGTGCCAGAGTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | ATATTGCTGAATGTCCATGCTTCGGTCTCGCTCAGCTGCCTGCGGGAGCATAGTAGGAGAAGTGGGCACTaGGTTGTTCATCTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLNVHASVSLSCLREHSRRSGH*VVHLSG Trigger: ACCACTCAGATGAACAACGCAGTGCCCACTTCTCCT...ACTATGCTCCCGCAGGCAGCTGAGCGAGACCGAAGCATGGACATTCAGCAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | ATATTGCTGAATGTCCATGCTTCGGTCTCGCTCAGCTGCCTGCGGGAGCATAGTGGGGCATCTTGTTGGTaGGAGACTTCTGTCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLNVHASVSLSCLREHSGASCW*ETSVHS Trigger: AGAATGGACAGAAGTCTCGCACCAACAAGATGCCCC...ACTATGCTCCCGCAGGCAGCTGAGCGAGACCGAAGCATGGACATTCAGCAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | AACCAATCTTTAACGCAACTTTGGGAGAGTCCAGGTAAGAAAGGATGGCATGAGGTGGGAAGTGCTGGGTaGGAGTCCCCAAGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NQSLTQLWESPGKKGWHEVGSAG*ESPRGH Trigger: GTGACCCCTTGGGGACTCGCACCCAGCACTTCCCAC...CTCATGCCATCCTTTCTTACCTGGACTCTCCCAAAGTTGCGTTAAAGATTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGATTCCCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTTGTGTGGGTGGGAAGTaGTGGGTGCGAGTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRFPMLQMGHSPGKIKDICVGGK*WVRVPK Trigger: CTTGGGGACTCGCACCCAGCACTTCCCACCCACACA...AATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGGGAATCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | CTACCTCACACTTTTCACTATTCTGTGTTTGCATCACTTCTTGGGACAAGGAAAGGCCCTGTGGCCTCATaGCATCCGCAAGGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPHTFHYSVFASLLGTRKGPVAS*HPQGLW Trigger: CCAGAGCCCTTGCGGATGTCATGAGGCCACAGGGCC...TTTCCTTGTCCCAAGAAGTGATGCAAACACAGAATAGTGAAAAGTGTGAGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGATGCACTTGGGAAACGAGACCATCACTTGAACAACAGCGACACACTGAAGACTTCTGTCCATTCTaGTGTGCAGGCCCGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGCTWETRPSLEQQRHTEDFCPF*CAGPCS Trigger: AGAGCACGGGCCTGCACAGCAGAATGGACAGAAGTC...TTCAGTGTGTCGCTGTTGTTCAAGTGATGGTCTCGTTTCCCAAGTGCATCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | GACACTCAGGGTCCATTACTACCTCACACTTTTCACTATTCTGTGTTTGCATCAGTGGGAAGTGCTGGGTaGGAGTCCCCAAGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DTQGPLLPHTFHYSVFASVGSAG*ESPRGH Trigger: GTGACCCCTTGGGGACTCGCACCCAGCACTTCCCAC...TGATGCAAACACAGAATAGTGAAAAGTGTGAGGTAGTAATGGACCCTGAGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | AGCGACACACTGAAGGCACCACCCACACTTATGACATTTTTCACTCCAAAGCAGTGGTCTTGTCCTTGGTaGGGTCGTGCAAGGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDTLKAPPTLMTFFTPKQWSCPW*GRARGH Trigger: ATGACCCCTTGCACGACCCCACCAAGGACAAGACCA...CTGCTTTGGAGTGAAAAATGTCATAAGTGTGGGTGGTGCCTTCAGTGTGTCGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | CCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTGCCAAATTCGTTGCAGTGGCCCTGTaGCCTCATGACATCCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PMLQMGHSPGKIKDIAKFVAVAL*PHDIRK Trigger: CTTGCGGATGTCATGAGGCCACAGGGCCACTGCAAC...GAATTTGGCAATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | GCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTGTTGGAGCAGAGGAGAAGTaGGCACTGCGTTGTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: APVCPSTKQKTFRGTFLVGAEEK*ALRCSS Trigger: AGATGAACAACGCAGTGCCCACTTCTCCTCTGCTCC...AACAAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGGGTATTCTTAGGTACCTCTGACATTGTAGCAGCTCCTTCAAAGGGTATATGGCTGTGTGGGTaGGAAGTGCTGGGTGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGVFLGTSDIVAAPSKGIWLCG*EVLGAS Trigger: ACTCGCACCCAGCACTTCCCACCCACACAGCCATAT...ACCCTTTGAAGGAGCTGCTACAATGTCAGAGGTACCTAAGAATACCCCAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGATTCCCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTACCCAGGTTGGGGTATaGATGTGGGTGTCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRFPMLQMGHSPGKIKDITQVGV*MWVSHL Trigger: CAGATGGGACACCCACATTCATACCCCAACCTGGGT...AATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGGGAATCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | CTAAACAAAAGACTTTCAGGGGGACCTTCCTTGTTGGGATCCAATGGCTGTGGCCTTGTCAGCTTTTGGTaGCTTAAGCGTTGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNKRLSGGPSLLGSNGCGLVSFW*LKRCHC Trigger: GCAGTGGCAACGCTTAAGTCACCAAAAGCTGACAAG...GCCACAGCCATTGGATCCCAACAAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | AGCACTCTGGCACACTCCTCTTCGTGTGCCCATCCTTTTTCTTCTACCAGGAAAAGGAGAAGTGGGCACTaGGTTGTTCATCTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: STLAHSSSCAHPFSSTRKRRSGH*VVHLSG Trigger: ACCACTCAGATGAACAACGCAGTGCCCACTTCTCCT...TTTCCTGGTAGAAGAAAAAGGATGGGCACACGAAGAGGAGTGTGCCAGAGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGATTCCCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTTGTGGGTGTCCCATCTaGTGGAGCAGAGGAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VRFPMLQMGHSPGKIKDICGCPI*WSRGEV Trigger: CACTTCTCCTCTGCTCCAGCAGATGGGACACCCACA...AATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGGGAATCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | AAGCACTCTGGCACACTCCTCTTCGTGTGCCCATCCTTTTTCTTCTACCAGGAATTGGTACAGGTGCTCTaGTTCAGTCGCCGCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KHSGTLLFVCPSFFFYQELVQVL*FSRRFL Trigger: TAAGAAGCGGCGACTGAACCAGAGCACCTGTACCAA...TTCCTGGTAGAAGAAAAAGGATGGGCACACGAAGAGGAGTGTGCCAGAGTGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | AACCAATCTTTAACGCAACTTTGGGAGAGTCCAGGTAAGAAAGGATGGCATGAGGGTTGGTCTTGTCCTTaGTGGGGTCGTGCAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NQSLTQLWESPGKKGWHEGWSCP*WGRARG Trigger: ACCCCTTGCACGACCCCACCAAGGACAAGACCAACC...CTCATGCCATCCTTTCTTACCTGGACTCTCCCAAAGTTGCGTTAAAGATTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGATTCCCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTTGGTCAGTGTTGCAGTaGCCCTGTGGCCTCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: VRFPMLQMGHSPGKIKDIWSVLQ*PCGLMT Trigger: TGTCATGAGGCCACAGGGCCACTGCAACACTGACCA...AATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGGGAATCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | AGCGACACACTGAAGGCACCACCCACACTTATGACATTTTTCACTCCAAAGCAGGTGGGGGCATCTTGTTaGTGCGAGACTTCTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDTLKAPPTLMTFFTPKQVGASC*CETSVH Trigger: ATGGACAGAAGTCTCGCACCAACAAGATGCCCCCAC...CTGCTTTGGAGTGAAAAATGTCATAAGTGTGGGTGGTGCCTTCAGTGTGTCGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CAA 72 bp | CAATTTGGGCCTGAAGCTGAAAGTTTCCCCTCTATATaGCTGAATGTCCATGCTTCGGTCTCGCTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QFGPEAESFPSI*LNVHASVSLSC Trigger: GCAGCTGAGCGAGACCGAAGCATGGACATTCAGCAATATAGAGGGGAAACTTTCAGCTTCAGGCCCAAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CAA 72 bp | CCACCCACACTTATGACATTTTTCACTCCAAAGCAGTaGAAGTTTGGCAGCAGTGGCAGCGGCACGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPTLMTFFTPKQ*KFGSSGSGTLK Trigger: TTTCAGCGTGCCGCTGCCACTGCTGCCAAACTTCAACTGCTTTGGAGTGAAAAATGTCATAAGTGTGGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | CTGTGCCTCTCACCTGCTGTTAACTCTCCAACTGCAGGTTCTCTAAGTCCCGGGACTGCGTTGTTCATCTaGGTGGTATGGAGATTATTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLSPAVNSPTAGSLSPGTALFI*VVWRLF Trigger: AAATAATCTCCATACCACTCAGATGAACAACGCAGT...CCCGGGACTTAGAGAACCTGCAGTTGGAGAGTTAACAGCAGGTGAGAGGCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGAGGCAGGAAGGTTAAAGGAACAGAGGATGCACTTGGGAAACGAGACCATCGTAGAAGTCATCATTaGCCTTGTCAGCTACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGGRKVKGTEDALGKRDHRRSHH*PCQLLP Trigger: AGGCAGTAGCTGACAAGGTCAATGATGACTTCTACG...ATGGTCTCGTTTCCCAAGTGCATCCTCTGTTCCTTTAACCTTCCTGCCTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| CDS-3UTR TCA 90 bp | GAAACTATCTGGTATGCTGATGCTGTGATGCCGAGAGCCCAGGCAGCAGAACATCGTAGAAGTCATCATTaGCCTTGTCAGCTTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ETIWYADAVMPRAQAAEHRRSHH*PCQLLV Trigger: CACCAAAAGCTGACAAGGTCAATGATGACTTCTACG...ATGTTCTGCTGCCTGGGCTCTCGGCATCACAGCATCAGCATACCAGATAGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | AGCGACACACTGAAGGCACCACCCACACTTATGACATTTTTCACTCCAAAGCAGGGGGCATCTTGTTGGTaGGAGACTTCTGTCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDTLKAPPTLMTFFTPKQGASCW*ETSVHS Trigger: AGAATGGACAGAAGTCTCGCACCAACAAGATGCCCC...CTGCTTTGGAGTGAAAAATGTCATAAGTGTGGGTGGTGCCTTCAGTGTGTCGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGGGTATTCTTAGGTACCTCTGACATTGTAGCAGCTCCTTCAAAGGGTTTGGTACAGGTGCTCTaGTTCAGTCGCCGCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GTGVFLGTSDIVAAPSKGLVQVL*FSRRFL Trigger: TAAGAAGCGGCGACTGAACCAGAGCACCTGTACCAA...ACCCTTTGAAGGAGCTGCTACAATGTCAGAGGTACCTAAGAATACCCCAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGGGTATTCTTAGGTACCTCTGACATTGTAGCAGCTCCTTCAAAGGGTGTTGAGCTCTTTGCCTaGAGGCTGCTGTTCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: GTGVFLGTSDIVAAPSKGVELFA*RLLFIW Trigger: CCATATGAACAGCAGCCTCCAGGCAAAGAGCTCAAC...ACCCTTTGAAGGAGCTGCTACAATGTCAGAGGTACCTAAGAATACCCCAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CAA 72 bp | GTTCATAGAGGATGGTTTTTGTCTTTGTTCCAGTTCTaGGAGATGACCCGGGAAGTGAAGGCTCCTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHRGWFLSLFQF*EMTREVKAPLC Trigger: GCACAGAGGAGCCTTCACTTCCCGGGTCATCTCCAAGAACTGGAACAAAGACAAAAACCATCCTCTATGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | AAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATGCTGTGTCCTTGGTGGGGTCGTaGAAGGGGTCATCCTTACGC | + |
|
Preference number: 4 (lower is better) Translates to: KFFLLAWNMETIWYADAVSLVGS*KGSSLR Trigger: GCGTAAGGATGACCCCTTGCACGACCCCACCAAGGA...CACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | GCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTGTTGTTAGTGATGAAATATaGCTGTGTGGGTGGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: APVCPSTKQKTFRGTFLVVSDEI*LCGWEV Trigger: CACTTCCCACCCACACAGCCATATTTCATCACTAAC...AACAAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | AACCAATCTTTAACGCAACTTTGGGAGAGTCCAGGTAAGAAAGGATGGCATGAGCGTGTTAAGCCAGAGTaGCGTGTCGTAGTTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: NQSLTQLWESPGKKGWHERVKPE*RVVVGT Trigger: TGTACCAACTACGACACGCCACTCTGGCTTAACACG...CTCATGCCATCCTTTCTTACCTGGACTCTCCCAAAGTTGCGTTAAAGATTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | CTACCTCACACTTTTCACTATTCTGTGTTTGCATCACTTCTTGGGACAAGGAAAAGGTCTCTCTCCATGTaGTCAGTGTTGCAGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPHTFHYSVFASLLGTRKRSLSM*SVLQWP Trigger: GGGCCACTGCAACACTGACCACATGGAGAGAGACCT...TTTCCTTGTCCCAAGAAGTGATGCAAACACAGAATAGTGAAAAGTGTGAGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | AACCAATCTTTAACGCAACTTTGGGAGAGTCCAGGTAAGAAAGGATGGCATGAGGTTGAGCTCTTTGCCTaGAGGCTGCTGTTCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: NQSLTQLWESPGKKGWHEVELFA*RLLFIW Trigger: CCATATGAACAGCAGCCTCCAGGCAAAGAGCTCAAC...CTCATGCCATCCTTTCTTACCTGGACTCTCCCAAAGTTGCGTTAAAGATTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | CATGCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTATTTATGGGGGTTCTTaGGTCCATGTTCTCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: HAPVCPSTKQKTFRGTFLIYGGS*VHVLIM Trigger: CATTATGAGAACATGGACTCAAGAACCCCCATAAAT...AAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | GGAACTGGGGTATTCTTAGGTACCTCTGACATTGTAGCAGCTCCTTCAAAGGGTTCTTTGCCTGGAGGCTaGTGTTCATATGGATTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTGVFLGTSDIVAAPSKGSLPGG*CSYGLE Trigger: TTCTAATCCATATGAACAGCAGCCTCCAGGCAAAGA...ACCCTTTGAAGGAGCTGCTACAATGTCAGAGGTACCTAAGAATACCCCAGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | CTACCTCACACTTTTCACTATTCTGTGTTTGCATCACTTCTTGGGACAAGGAAAAGCCTGACTCAGCTATaGCAAGCTTGCCCTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPHTFHYSVFASLLGTRKSLTQL*QACPCC Trigger: GCAACAAGGGCAAGCTTGGCATAGCTGAGTCAGGCT...TTTCCTTGTCCCAAGAAGTGATGCAAACACAGAATAGTGAAAAGTGTGAGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | ATTCTGTGTTTGCATCACTTCTTGGGACAAGGAAATGCTTGTGACATGAGCAAAGGAGCAGAGGAGAAGTaGGCACTGCGTTGTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ILCLHHFLGQGNACDMSKGAEEK*ALRCSS Trigger: AGATGAACAACGCAGTGCCCACTTCTCCTCTGCTCC...TTTGCTCATGTCACAAGCATTTCCTTGTCCCAAGAAGTGATGCAAACACAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | CACTTTTCACTATTCTGTGTTTGCATCACTTCTTGGGACAAGGAAATGCTTGTGGTGGGGGCATCTTGTTaGTGCGAGACTTCTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HFSLFCVCITSWDKEMLVVGASC*CETSVH Trigger: ATGGACAGAAGTCTCGCACCAACAAGATGCCCCCAC...CACAAGCATTTCCTTGTCCCAAGAAGTGATGCAAACACAGAATAGTGAAAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CCA 90 bp | AACCAATCTTTAACGCAACTTTGGGAGAGTCCAGGTAAGAAAGGATGGCATGAGGTTAGTGATGAAATATaGCTGTGTGGGTGGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NQSLTQLWESPGKKGWHEVSDEI*LCGWEV Trigger: CACTTCCCACCCACACAGCCATATTTCATCACTAAC...CTCATGCCATCCTTTCTTACCTGGACTCTCCCAAAGTTGCGTTAAAGATTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CAA 72 bp | GATAGTTGCAGACTCTTCTTTCTAAACAAAACTCTCTaGCCTCTCCATGCACCTGTCTGCCCTTCCACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: DSCRLFFLNKTL*PLHAPVCPSTK Trigger: TTTAGTGGAAGGGCAGACAGGTGCATGGAGAGGCAAGAGAGTTTTGTTTAGAAAGAAGAGTCTGCAACTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGATTCCCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTATTTATGGGGGTTCTTaGGTCCATGTTCTCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: VRFPMLQMGHSPGKIKDIIYGGS*VHVLIM Trigger: CATTATGAGAACATGGACTCAAGAACCCCCATAAAT...AATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGGGAATCTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | AACCAATCTTTAACGCAACTTTGGGAGAGTCCAGGTAAGAAAGGATGGCATGAGTCTTTGCCTGGAGGCTaGTGTTCATATGGATTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NQSLTQLWESPGKKGWHESLPGG*CSYGLE Trigger: TTCTAATCCATATGAACAGCAGCCTCCAGGCAAAGA...CTCATGCCATCCTTTCTTACCTGGACTCTCCCAAAGTTGCGTTAAAGATTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | AAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATGCTGTGTCCACTCTTACAGGGTaGAAAGGGAGATTTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KFFLLAWNMETIWYADAVSTLTG*KGRFPL Trigger: CAAGGGAAATCTCCCTTTGCACCCTGTAAGAGTGGA...CACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR GCA 90 bp | ATTCTGTGTTTGCATCACTTCTTGGGACAAGGAAATGCTTGTGACATGAGCAAATCCACTCTTACAGGGTaGAAAGGGAGATTTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILCLHHFLGQGNACDMSKSTLTG*KGRFPL Trigger: CAAGGGAAATCTCCCTTTGCACCCTGTAAGAGTGGA...TTTGCTCATGTCACAAGCATTTCCTTGTCCCAAGAAGTGATGCAAACACAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CAA 72 bp | TTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATaGCCAAATTCTTCCTACTTGCTTGGAACATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRWDTALERSKI*PNSSYLLGTWK Trigger: TTTCCATGTTCCAAGCAAGTAGGAAGAATTTGGCAATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR TCA 90 bp | AAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATGCTGTGACTGCGTTGTTCATCTaGGTGGTATGGAGATTATTT | + |
|
Preference number: 4 (lower is better) Translates to: KFFLLAWNMETIWYADAVTALFI*VVWRLF Trigger: AAATAATCTCCATACCACTCAGATGAACAACGCAGT...CACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CAA 72 bp | CTGGAAAGATCAAAGATATTGCCAAATTCTTCCTACTaGCTTGGAACATGGAAACTATCTGGTATGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LERSKILPNSSY*LGTWKLSGMLM Trigger: CATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTTGGCAATATCTTTGATCTTTCCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| 3UTR CAA 72 bp | ACTTTAGAAGTTCTTCTTTATTATTCTCTGGACCCCTaGGCCATCATAAAAACCTATCACTGCCAACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLEVLLYYSLDP*AIIKTYHCQHH Trigger: ATGATGTTGGCAGTGATAGGTTTTTATGATGGCCAAGGGGTCCAGAGAATAATAAAGAAGAACTTCTAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 90 bp | CGGTTGCCCCCTGTGAGCAGCAGTACGCCGCCCAGTTGCGCTAGCTaGCCGTGCCCAGATCGCTCCTGCGCCCGGCACATGCGGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: RLPPVSSSTPPSCAS*PCPDRSCARHMRAH Trigger: GTGTGCCCGCATGTGCCGGGCGCAGGAGCGATCTGGGCACGGGCAGCTAGCGCAACTGGGCGGCGTACTGCTGCTCACAGGGGGCAACCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 90 bp | GCTCCGGAGCGGTTGCCCCCTGTGAGCAGCAGTACGCCGCCCAGTTaGGCTAGCTGCCCGTGCCCAGATCGCTCCTGCGCCCGGCACATG | + |
|
Preference number: 5 (lower is better) Translates to: APERLPPVSSSTPPS*ASCPCPDRSCARHM Trigger: CATGTGCCGGGCGCAGGAGCGATCTGGGCACGGGCAGCTAGCGCAACTGGGCGGCGTACTGCTGCTCACAGGGGGCAACCGCTCCGGAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 90 bp | AGTACGCCGCCCAGTTGCGCTAGCTGCCCGTGCCCAGATCGCTCCTaGGCCCGGCACATGCGGGCACACAGCTCGGTGAGGAAGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: STPPSCASCPCPDRS*ARHMRAHSSVRKQP Trigger: CGGCTGCTTCCTCACCGAGCTGTGTGCCCGCATGTGCCGGGCGCAGGAGCGATCTGGGCACGGGCAGCTAGCGCAACTGGGCGGCGTACT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 90 bp | ATGACATCCGCAAGGGCTCTGGACATGTGTTCCCTTTGGGGCCGGTaGGCTTTCTCCAGCCCCAGCTTGGTGAAGATGCCCACCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: MTSARALDMCSLWGR*AFSSPSLVKMPTST Trigger: GGTGCTGGTGGGCATCTTCACCAAGCTGGGGCTGGAGAAAGCGCACCGGCCCCAAAGGGAACACATGTCCAGAGCCCTTGCGGATGTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 90 bp | AGGGGATGTGGGGGCATCTTGTTGGTGCGAGACTTCTGTCCATTCTaGTGTGCAGGCCCGTGCTCTGGGCTGAAGGCGCGAGGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RGCGGILLVRDFCPF*CAGPCSGLKARGSS Trigger: AGATGAGCCTCGCGCCTTCAGCCCAGAGCACGGGCCTGCACAGCAGAATGGACAGAAGTCTCGCACCAACAAGATGCCCCCACATCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 90 bp | AGGGGTCACAAGAGCCTGACTCAGCTATGCCAAGCTTGCCCTTGTTaGCATAAGCCTGCCGCCGGAGAGACTGGTCACTGGGGTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGHKSLTQLCQACPC*HKPAAGETGHWGPR Trigger: CCTGGGACCCCAGTGACCAGTCTCTCCGGCGGCAGGCTTATGGCAACAAGGGCAAGCTTGGCATAGCTGAGTCAGGCTCTTGTGACCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 90 bp | GCTGGGTGCGAGTCCCCAAGGGGTCACAAGAGCCTGACTCAGCTATaGCAAGCTTGCCCTTGTTGCCATAAGCCTGCCGCCGGAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: AGCESPRGHKSLTQL*QACPCCHKPAAGET Trigger: AGTCTCTCCGGCGGCAGGCTTATGGCAACAAGGGCAAGCTTGGCATAGCTGAGTCAGGCTCTTGTGACCCCTTGGGGACTCGCACCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGCCCAAGGCGGATGGAGGTTAAGACTCCAGGAAGGTGAGGGAAGCCAGTTCTCCAGCCCCAGCTaGGTGAAGATGCCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRAQGGWRLRLQEGEGSQFSSPS*VKMPTS Trigger: GCTGGTGGGCATCTTCACCAAGCTGGGGCTGGAGAA...CTGGCTTCCCTCACCTTCCTGGAGTCTTAACCTCCATCCGCCTTGGGCTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
||
| CDS GCA 90 bp | ATGTGGGGGCATCTTGTTGGTGCGAGACTTCTGTCCATTCTGCTGTaGAGGCCCGTGCTCTGGGCTGAAGGCGCGAGGCTCATCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: MWGHLVGARLLSILL*RPVLWAEGARLIFH Trigger: GTGGAAGATGAGCCTCGCGCCTTCAGCCCAGAGCACGGGCCTGCACAGCAGAATGGACAGAAGTCTCGCACCAACAAGATGCCCCCACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 90 bp | GAGTCCCCAAGGGGTCACAAGAGCCTGACTCAGCTATGCCAAGCTTaGCCTTGTTGCCATAAGCCTGCCGCCGGAGAGACTGGTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: ESPRGHKSLTQLCQA*PCCHKPAAGETGHW Trigger: CCAGTGACCAGTCTCTCCGGCGGCAGGCTTATGGCAACAAGGGCAAGCTTGGCATAGCTGAGTCAGGCTCTTGTGACCCCTTGGGGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | CGCTCAGCTGCCTGCGGGAGCATAGTAGGCATGACCCAGGAAAAGCATGACTCCGGACATGTGTTCCCTTaGGGGCCGGTGCGCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSAACGSIVGMTQEKHDSGHVFP*GPVRFL Trigger: GAGAAAGCGCACCGGCCCCAAAGGGAACACATGTCC...GGAGTCATGCTTTTCCTGGGTCATGCCTACTATGCTCCCGCAGGCAGCTGAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS TCA 90 bp | TGCGAGACTTCTGTCCATTCTGCTGTGCAGGCCCGTGCTCTGGGCTaGAGGCGCGAGGCTCATCTTCCACTCTTACAGGGTGCAAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CETSVHSAVQARALG*RREAHLPLLQGAKG Trigger: TCCCTTTGCACCCTGTAAGAGTGGAAGATGAGCCTCGCGCCTTCAGCCCAGAGCACGGGCCTGCACAGCAGAATGGACAGAAGTCTCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS CCA 90 bp | GTTGGTGCGAGACTTCTGTCCATTCTGCTGTGCAGGCCCGTGCTCTaGGCTGAAGGCGCGAGGCTCATCTTCCACTCTTACAGGGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VGARLLSILLCRPVL*AEGARLIFHSYRVQ Trigger: TTGCACCCTGTAAGAGTGGAAGATGAGCCTCGCGCCTTCAGCCCAGAGCACGGGCCTGCACAGCAGAATGGACAGAAGTCTCGCACCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 90 bp | TGCTCTGGGCTGAAGGCGCGAGGCTCATCTTCCACTCTTACAGGGTaGAAAGGGAGATTTCCCTTGACAGCCAGCTCTGCCAGGTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CSGLKARGSSSTLTG*KGRFPLTASSARCL Trigger: AAGGCACCTGGCAGAGCTGGCTGTCAAGGGAAATCTCCCTTTGCACCCTGTAAGAGTGGAAGATGAGCCTCGCGCCTTCAGCCCAGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 90 bp | ATCTTGTTGGTGCGAGACTTCTGTCCATTCTGCTGTGCAGGCCCGTaGTCTGGGCTGAAGGCGCGAGGCTCATCTTCCACTCTTACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ILLVRDFCPFCCAGP*SGLKARGSSSTLTG Trigger: CCCTGTAAGAGTGGAAGATGAGCCTCGCGCCTTCAGCCCAGAGCACGGGCCTGCACAGCAGAATGGACAGAAGTCTCGCACCAACAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS CCA 90 bp | TGGACCACGATGTTAAGGTCTCTCTCCATGTGGTCAGTGTTGCAGTaGCCCTGTGGCCTCATGACATCCGCAAGGGCTCTGGACATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: WTTMLRSLSMWSVLQ*PCGLMTSARALDMC Trigger: ACACATGTCCAGAGCCCTTGCGGATGTCATGAGGCCACAGGGCCACTGCAACACTGACCACATGGAGAGAGACCTTAACATCGTGGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | CTCTCACCTGCTGTTAACTCTCCAACTGCAGGTTCTCTAAGTCCCGGGCAAAACGGACATGTGTTCCCTTaGGGGCCGGTGCGCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSPAVNSPTAGSLSPGQNGHVFP*GPVRFL Trigger: GAGAAAGCGCACCGGCCCCAAAGGGAACACATGTCC...GTTTTGCCCGGGACTTAGAGAACCTGCAGTTGGAGAGTTAACAGCAGGTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS CCA 90 bp | GATGTTAAGGTCTCTCTCCATGTGGTCAGTGTTGCAGTGGCCCTGTaGCCTCATGACATCCGCAAGGGCTCTGGACATGTGTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DVKVSLHVVSVAVAL*PHDIRKGSGHVFPL Trigger: CAAAGGGAACACATGTCCAGAGCCCTTGCGGATGTCATGAGGCCACAGGGCCACTGCAACACTGACCACATGGAGAGAGACCTTAACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS CCA 90 bp | GTCCCAGGTCTTAAAGTTGGCAGTAGAGTTGTAGGCCAGGGGATGTaGGGGCATCTTGTTGGTGCGAGACTTCTGTCCATTCTGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPGLKVGSRVVGQGM*GHLVGARLLSILLC Trigger: GCACAGCAGAATGGACAGAAGTCTCGCACCAACAAGATGCCCCCACATCCCCTGGCCTACAACTCTACTGCCAACTTTAAGACCTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGAGGCAGGAAGGTTAAAGGAACAGAGGATGCACTTGGGAAACGAGACCATAGGTTGGTCTTGTCCTaGGTGGGGTCGTGCAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TGGRKVKGTEDALGKRDHRLVLS*VGSCKG Trigger: CCCCTTGCACGACCCCACCAAGGACAAGACCAACCT...ATGGTCTCGTTTCCCAAGTGCATCCTCTGTTCCTTTAACCTTCCTGCCTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTCCCCTCTATATTGCTGAATGTCCATGCTTCGGTCTCGCTCAGCTGCCTGACGATAAGGTTGGTCTaGTCCTTGGTGGGGTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SFPSILLNVHASVSLSCLTIRLV*SLVGSC Trigger: GCACGACCCCACCAAGGACAAGACCAACCTTATCGT...CAGGCAGCTGAGCGAGACCGAAGCATGGACATTCAGCAATATAGAGGGGAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | CTCTCACCTGCTGTTAACTCTCCAACTGCAGGTTCTCTAAGTCCCGGGCAAAACTGTGGGGGCATCTTGTaGGTGCGAGACTTCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSPAVNSPTAGSLSPGQNCGGIL*VRDFCP Trigger: TGGACAGAAGTCTCGCACCAACAAGATGCCCCCACA...GTTTTGCCCGGGACTTAGAGAACCTGCAGTTGGAGAGTTAACAGCAGGTGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS TCA 90 bp | AGGCTGCTGTTCATATGGATTAGAAATCTGACCCAGGTTGGGGTATaGATGTGGGTGTCCCATCTGCTGGAGCAGAGGAGAAGTGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RLLFIWIRNLTQVGV*MWVSHLLEQRRSGH Trigger: GTGCCCACTTCTCCTCTGCTCCAGCAGATGGGACACCCACATTCATACCCCAACCTGGGTCAGATTTCTAATCCATATGAACAGCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | GCACCTGTCTGCCCTTCCACTAAACAAAAGACTTTCAGGGGGACCTTCCTTGTTAAAGGGAGATTTCCCTaGACAGCCAGCTCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: APVCPSTKQKTFRGTFLVKGRFP*TASSAR Trigger: CCTGGCAGAGCTGGCTGTCAAGGGAAATCTCCCTTT...AACAAGGAAGGTCCCCCTGAAAGTCTTTTGTTTAGTGGAAGGGCAGACAGGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGAGGCAGGAAGGTTAAAGGAACAGAGGATGCACTTGGGAAACGAGACCATAAAGGGAGATTTCCCTaGACAGCCAGCTCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGGRKVKGTEDALGKRDHKGRFP*TASSAR Trigger: CCTGGCAGAGCTGGCTGTCAAGGGAAATCTCCCTTT...ATGGTCTCGTTTCCCAAGTGCATCCTCTGTTCCTTTAACCTTCCTGCCTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | AAGCACTCTGGCACACTCCTCTTCGTGTGCCCATCCTTTTTCTTCTACCAGGAATGTGGGGGCATCTTGTaGGTGCGAGACTTCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KHSGTLLFVCPSFFFYQECGGIL*VRDFCP Trigger: TGGACAGAAGTCTCGCACCAACAAGATGCCCCCACA...TTCCTGGTAGAAGAAAAAGGATGGGCACACGAAGAGGAGTGTGCCAGAGTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS CCA 90 bp | TGGGGTATGAATGTGGGTGTCCCATCTGCTGGAGCAGAGGAGAAGTaGGCACTGCGTTGTTCATCTGAGTGGTATGGAGATTATTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: WGMNVGVPSAGAEEK*ALRCSSEWYGDYLW Trigger: CCATAAATAATCTCCATACCACTCAGATGAACAACGCAGTGCCCACTTCTCCTCTGCTCCAGCAGATGGGACACCCACATTCATACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | GACACTCAGGGTCCATTACTACCTCACACTTTTCACTATTCTGTGTTTGCATCAAGGTTGGTCTTGTCCTaGGTGGGGTCGTGCAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DTQGPLLPHTFHYSVFASRLVLS*VGSCKG Trigger: CCCCTTGCACGACCCCACCAAGGACAAGACCAACCT...TGATGCAAACACAGAATAGTGAAAAGTGTGAGGTAGTAATGGACCCTGAGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | CCCATGCTTCAGATGGGACACAGCCCTGGAAAGATCAAAGATATTGCCAAATTCACGATAAGGTTGGTCTaGTCCTTGGTGGGGTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PMLQMGHSPGKIKDIAKFTIRLV*SLVGSC Trigger: GCACGACCCCACCAAGGACAAGACCAACCTTATCGT...GAATTTGGCAATATCTTTGATCTTTCCAGGGCTGTGTCCCATCTGAAGCATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGATGCACTTGGGAAACGAGACCATCACTTGAACAACAGCGACACACTGAATACTTGTTGAGCTCTTaGCCTGGAGGCTGCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RGCTWETRPSLEQQRHTEYLLSS*PGGCCS Trigger: TGAACAGCAGCCTCCAGGCAAAGAGCTCAACAAGTA...TTCAGTGTGTCGCTGTTGTTCAAGTGATGGTCTCGTTTCCCAAGTGCATCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | GACACTCAGGGTCCATTACTACCTCACACTTTTCACTATTCTGTGTTTGCATCAGGATGTGGGGGCATCTaGTTGGTGCGAGACTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DTQGPLLPHTFHYSVFASGCGGI*LVRDFC Trigger: ACAGAAGTCTCGCACCAACAAGATGCCCCCACATCC...TGATGCAAACACAGAATAGTGAAAAGTGTGAGGTAGTAATGGACCCTGAGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | AAATTCTTCCTACTTGCTTGGAACATGGAAACTATCTGGTATGCTGATGCTGTGGGATGTGGGGGCATCTaGTTGGTGCGAGACTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KFFLLAWNMETIWYADAVGCGGI*LVRDFC Trigger: ACAGAAGTCTCGCACCAACAAGATGCCCCCACATCC...CACAGCATCAGCATACCAGATAGTTTCCATGTTCCAAGCAAGTAGGAAGAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | GACACTCAGGGTCCATTACTACCTCACACTTTTCACTATTCTGTGTTTGCATCATACTTGTTGAGCTCTTaGCCTGGAGGCTGCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DTQGPLLPHTFHYSVFASYLLSS*PGGCCS Trigger: TGAACAGCAGCCTCCAGGCAAAGAGCTCAACAAGTA...TGATGCAAACACAGAATAGTGAAAAGTGTGAGGTAGTAATGGACCCTGAGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS TCA 90 bp | TGCGTTGTTCATCTGAGTGGTATGGAGATTATTTATGGGGGTTCTTaGGTCCATGTTCTCATAATGCTGCACGTGGACCACGATGTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: CVVHLSGMEIIYGGS*VHVLIMLHVDHDVK Trigger: CTTAACATCGTGGTCCACGTGCAGCATTATGAGAACATGGACTCAAGAACCCCCATAAATAATCTCCATACCACTCAGATGAACAACGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | AGCGACACACTGAAGGCACCACCCACACTTATGACATTTTTCACTCCAAAGCAGAAGTCATCATTGACCTaGTCAGCTTTTGGTGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: SDTLKAPPTLMTFFTPKQKSSLT*SAFGDL Trigger: TAAGTCACCAAAAGCTGACAAGGTCAATGATGACTT...CTGCTTTGGAGTGAAAAATGTCATAAGTGTGGGTGGTGCCTTCAGTGTGTCGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | CTACCTCACACTTTTCACTATTCTGTGTTTGCATCACTTCTTGGGACAAGGAAATTTAAGGAGGCGTACTaGTTGAGCTCTTTGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPHTFHYSVFASLLGTRKFKEAY*LSSLPG Trigger: TCCAGGCAAAGAGCTCAACAAGTACGCCTCCTTAAA...TTTCCTTGTCCCAAGAAGTGATGCAAACACAGAATAGTGAAAAGTGTGAGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | ATTCTGTGTTTGCATCACTTCTTGGGACAAGGAAATGCTTGTGACATGAGCAAATTTAAGGAGGCGTACTaGTTGAGCTCTTTGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ILCLHHFLGQGNACDMSKFKEAY*LSSLPG Trigger: TCCAGGCAAAGAGCTCAACAAGTACGCCTCCTTAAA...TTTGCTCATGTCACAAGCATTTCCTTGTCCCAAGAAGTGATGCAAACACAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | GACACTCAGGGTCCATTACTACCTCACACTTTTCACTATTCTGTGTTTGCATCATATTTATGGGGGTTCTaGAGTCCATGTTCTCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: DTQGPLLPHTFHYSVFASYLWGF*SPCSHN Trigger: ATTATGAGAACATGGACTCAAGAACCCCCATAAATA...TGATGCAAACACAGAATAGTGAAAAGTGTGAGGTAGTAATGGACCCTGAGTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS-3UTR CAA 90 bp | ATTCTGTGTTTGCATCACTTCTTGGGACAAGGAAATGCTTGTGACATGAGCAAATATTTATGGGGGTTCTaGAGTCCATGTTCTCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: ILCLHHFLGQGNACDMSKYLWGF*SPCSHN Trigger: ATTATGAGAACATGGACTCAAGAACCCCCATAAATA...TTTGCTCATGTCACAAGCATTTCCTTGTCCCAAGAAGTGATGCAAACACAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 72 bp | CCCAGTTGCGCTAGCTGCCCGTGCCCAGATCGCTCCTaGGCCCGGCACATGCGGGCACACAGCTCGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSCASCPCPDRS*ARHMRAHSSVR Trigger: CCTCACCGAGCTGTGTGCCCGCATGTGCCGGGCGCAGGAGCGATCTGGGCACGGGCAGCTAGCGCAACTGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 72 bp | CGGTTGCCCCCTGTGAGCAGCAGTACGCCGCCCAGTTaGGCTAGCTGCCCGTGCCCAGATCGCTCCTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLPPVSSSTPPS*ASCPCPDRSCA Trigger: GGCGCAGGAGCGATCTGGGCACGGGCAGCTAGCGCAACTGGGCGGCGTACTGCTGCTCACAGGGGGCAACCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS TCA 72 bp | GCTCCTGCGCCCGGCACATGCGGGCACACAGCTCGGTaGGGAAGCAGCCGAGAAGCAGCCGAAGGACTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: APAPGTCGHTAR*GSSREAAEGLG Trigger: GCCGAGTCCTTCGGCTGCTTCTCGGCTGCTTCCTCACCGAGCTGTGTGCCCGCATGTGCCGGGCGCAGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS GCA 72 bp | CCTGTGAGCAGCAGTACGCCGCCCAGTTGCGCTAGCTaGCCGTGCCCAGATCGCTCCTGCGCCCGGCACATG | + |
|
Preference number: 6 (lower is better) Translates to: PVSSSTPPSCAS*PCPDRSCARHM Trigger: CATGTGCCGGGCGCAGGAGCGATCTGGGCACGGGCAGCTAGCGCAACTGGGCGGCGTACTGCTGCTCACAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
||
| CDS CCA 72 bp | CTGGCCCATGACATCGAAGTAGCCCCGACAGGAGTCTaGCGTGGGCGCTCGAGTCGGCGGTGCGTCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LAHDIEVAPTGV*RGRSSRRCVRA Trigger: GGCTCGGACGCACCGCCGACTCGAGCGCCCACGCCAGACTCCTGTCGGGGCTACTTCGATGTCATGGGCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS CAA 72 bp | TCCCTTTGGGGCCGGTGCGCTTTCTCCAGCCCCAGCTaGGTGAAGATGCCCACCAGCACCATGACAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: SLWGRCAFSSPS*VKMPTSTMTAT Trigger: GGTGGCTGTCATGGTGCTGGTGGGCATCTTCACCAAGCTGGGGCTGGAGAAAGCGCACCGGCCCCAAAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS GCA 72 bp | GGGGGCATCTTGTTGGTGCGAGACTTCTGTCCATTCTaGTGTGCAGGCCCGTGCTCTGGGCTGAAGGCGCGA | + |
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Preference number: 6 (lower is better) Translates to: GGILLVRDFCPF*CAGPCSGLKAR Trigger: TCGCGCCTTCAGCCCAGAGCACGGGCCTGCACAGCAGAATGGACAGAAGTCTCGCACCAACAAGATGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS GCA 72 bp | GTGCGAGACTTCTGTCCATTCTGCTGTGCAGGCCCGTaGTCTGGGCTGAAGGCGCGAGGCTCATCTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: VRDFCPFCCAGP*SGLKARGSSST Trigger: AGTGGAAGATGAGCCTCGCGCCTTCAGCCCAGAGCACGGGCCTGCACAGCAGAATGGACAGAAGTCTCGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS GCA 72 bp | CATCTTGTTGGTGCGAGACTTCTGTCCATTCTGCTGTaGAGGCCCGTGCTCTGGGCTGAAGGCGCGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: HLVGARLLSILL*RPVLWAEGARL Trigger: GAGCCTCGCGCCTTCAGCCCAGAGCACGGGCCTGCACAGCAGAATGGACAGAAGTCTCGCACCAACAAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS CAA 72 bp | CATGACATCCGCAAGGGCTCTGGACATGTGTTCCCTTaGGGGCCGGTGCGCTTTCTCCAGCCCCAGCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: HDIRKGSGHVFP*GPVRFLQPQLG Trigger: ACCAAGCTGGGGCTGGAGAAAGCGCACCGGCCCCAAAGGGAACACATGTCCAGAGCCCTTGCGGATGTCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS TCA 72 bp | TCTGTCCATTCTGCTGTGCAGGCCCGTGCTCTGGGCTaGAGGCGCGAGGCTCATCTTCCACTCTTACAGGGT | + |
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Preference number: 6 (lower is better) Translates to: SVHSAVQARALG*RREAHLPLLQG Trigger: ACCCTGTAAGAGTGGAAGATGAGCCTCGCGCCTTCAGCCCAGAGCACGGGCCTGCACAGCAGAATGGACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS GCA 72 bp | GAGTCCCCAAGGGGTCACAAGAGCCTGACTCAGCTATaGCAAGCTTGCCCTTGTTGCCATAAGCCTGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: ESPRGHKSLTQL*QACPCCHKPAA Trigger: GGCGGCAGGCTTATGGCAACAAGGGCAAGCTTGGCATAGCTGAGTCAGGCTCTTGTGACCCCTTGGGGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS TCA 72 bp | GTGCTGGGTGCGAGTCCCCAAGGGGTCACAAGAGCCTaGCTCAGCTATGCCAAGCTTGCCCTTGTTGCCATA | + |
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Preference number: 6 (lower is better) Translates to: VLGASPQGVTRA*LSYAKLALVAI Trigger: TATGGCAACAAGGGCAAGCTTGGCATAGCTGAGTCAGGCTCTTGTGACCCCTTGGGGACTCGCACCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS GCA 72 bp | AGTTGTAGGCCAGGGGATGTGGGGGCATCTTGTTGGTaGGAGACTTCTGTCCATTCTGCTGTGCAGGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: SCRPGDVGASCW*ETSVHSAVQAR Trigger: ACGGGCCTGCACAGCAGAATGGACAGAAGTCTCGCACCAACAAGATGCCCCCACATCCCCTGGCCTACAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS GCA 72 bp | AAGAGCCTGACTCAGCTATGCCAAGCTTGCCCTTGTTaGCATAAGCCTGCCGCCGGAGAGACTGGTCACTGG | + |
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Preference number: 6 (lower is better) Translates to: KSLTQLCQACPC*HKPAAGETGHW Trigger: CCAGTGACCAGTCTCTCCGGCGGCAGGCTTATGGCAACAAGGGCAAGCTTGGCATAGCTGAGTCAGGCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS GCA 72 bp | AGGGGTCACAAGAGCCTGACTCAGCTATGCCAAGCTTaGCCTTGTTGCCATAAGCCTGCCGCCGGAGAGACT | + |
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Preference number: 6 (lower is better) Translates to: RGHKSLTQLCQA*PCCHKPAAGET Trigger: AGTCTCTCCGGCGGCAGGCTTATGGCAACAAGGGCAAGCTTGGCATAGCTGAGTCAGGCTCTTGTGACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS CCA 72 bp | GTCTCTCTCCATGTGGTCAGTGTTGCAGTGGCCCTGTaGCCTCATGACATCCGCAAGGGCTCTGGACATGTG | + |
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Preference number: 6 (lower is better) Translates to: VSLHVVSVAVAL*PHDIRKGSGHV Trigger: CACATGTCCAGAGCCCTTGCGGATGTCATGAGGCCACAGGGCCACTGCAACACTGACCACATGGAGAGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS GCA 72 bp | CTGAAGGCGCGAGGCTCATCTTCCACTCTTACAGGGTaGAAAGGGAGATTTCCCTTGACAGCCAGCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LKARGSSSTLTG*KGRFPLTASSA Trigger: GGCAGAGCTGGCTGTCAAGGGAAATCTCCCTTTGCACCCTGTAAGAGTGGAAGATGAGCCTCGCGCCTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS CCA 72 bp | TGCACGTGGACCACGATGTTAAGGTCTCTCTCCATGTaGTCAGTGTTGCAGTGGCCCTGTGGCCTCATGACA | + |
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Preference number: 6 (lower is better) Translates to: CTWTTMLRSLSM*SVLQWPCGLMT Trigger: TGTCATGAGGCCACAGGGCCACTGCAACACTGACCACATGGAGAGAGACCTTAACATCGTGGTCCACGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS CCA 72 bp | TTAGTGATGAAATATGGCTGTGTGGGTGGGAAGTGCTaGGTGCGAGTCCCCAAGGGGTCACAAGAGCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LVMKYGCVGGKC*VRVPKGSQEPD Trigger: GTCAGGCTCTTGTGACCCCTTGGGGACTCGCACCCAGCACTTCCCACCCACACAGCCATATTTCATCACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS CAA 72 bp | TCTTCCACTCTTACAGGGTGCAAAGGGAGATTTCCCTaGACAGCCAGCTCTGCCAGGTGCCTTCTTTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: SSTLTGCKGRFP*TASSARCLLLA Trigger: CGCCAAAAGAAGGCACCTGGCAGAGCTGGCTGTCAAGGGAAATCTCCCTTTGCACCCTGTAAGAGTGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS CCA 72 bp | AATGTGGGTGTCCCATCTGCTGGAGCAGAGGAGAAGTaGGCACTGCGTTGTTCATCTGAGTGGTATGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: NVGVPSAGAEEK*ALRCSSEWYGD Trigger: ATCTCCATACCACTCAGATGAACAACGCAGTGCCCACTTCTCCTCTGCTCCAGCAGATGGGACACCCACATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS GCA 72 bp | AGGGTGCAAAGGGAGATTTCCCTTGACAGCCAGCTCTaGCAGGTGCCTTCTTTTGGCGTAGAAGTCATCATT | + |
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Preference number: 6 (lower is better) Translates to: RVQREISLDSQL*QVPSFGVEVII Trigger: AATGATGACTTCTACGCCAAAAGAAGGCACCTGGCAGAGCTGGCTGTCAAGGGAAATCTCCCTTTGCACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS CCA 72 bp | CTTAAAGTTGGCAGTAGAGTTGTAGGCCAGGGGATGTaGGGGCATCTTGTTGGTGCGAGACTTCTGTCCATT | + |
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Preference number: 6 (lower is better) Translates to: LKVGSRVVGQGM*GHLVGARLLSI Trigger: AATGGACAGAAGTCTCGCACCAACAAGATGCCCCCACATCCCCTGGCCTACAACTCTACTGCCAACTTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS TCA 72 bp | CCTTGTCAGCTACTGCCTTTAAGGAGGCGTACTTGTTaGGCTCTTTGCCTGGAGGCTGCTGTTCATATGGAT | + |
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Preference number: 6 (lower is better) Translates to: PCQLLPLRRRTC*ALCLEAAVHMD Trigger: ATCCATATGAACAGCAGCCTCCAGGCAAAGAGCTCAACAAGTACGCCTCCTTAAAGGCAGTAGCTGACAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
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| CDS TCA 72 bp | CTGCCAGGTGCCTTCTTTTGGCGTAGAAGTCATCATTaGCCTTGTCAGCTACTGCCTTTAAGGAGGCGTACT | + |
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Preference number: 6 (lower is better) Translates to: LPGAFFWRRSHH*PCQLLPLRRRT Trigger: AGTACGCCTCCTTAAAGGCAGTAGCTGACAAGGTCAATGATGACTTCTACGCCAAAAGAAGGCACCTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
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| CDS TCA 72 bp | TGGAGCAGAGGAGAAGTGGGCACTGCGTTGTTCATCTaGGTGGTATGGAGATTATTTATGGGGGTTCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: WSRGEVGTALFI*VVWRLFMGVLE Trigger: CTCAAGAACCCCCATAAATAATCTCCATACCACTCAGATGAACAACGCAGTGCCCACTTCTCCTCTGCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS TCA 72 bp | TTCATATGGATTAGAAATCTGACCCAGGTTGGGGTATaGATGTGGGTGTCCCATCTGCTGGAGCAGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: FIWIRNLTQVGV*MWVSHLLEQRR Trigger: TCTCCTCTGCTCCAGCAGATGGGACACCCACATTCATACCCCAACCTGGGTCAGATTTCTAATCCATATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS GCA 72 bp | GTGTCCCATCTGCTGGAGCAGAGGAGAAGTGGGCACTaGGTTGTTCATCTGAGTGGTATGGAGATTATTTAT | + |
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Preference number: 6 (lower is better) Translates to: VSHLLEQRRSGH*VVHLSGMEIIY Trigger: ATAAATAATCTCCATACCACTCAGATGAACAACGCAGTGCCCACTTCTCCTCTGCTCCAGCAGATGGGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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| CDS CAA 72 bp | TTGACCTTGTCAGCTACTGCCTTTAAGGAGGCGTACTaGTTGAGCTCTTTGCCTGGAGGCTGCTGTTCATAT | + |
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Preference number: 6 (lower is better) Translates to: LTLSATAFKEAY*LSSLPGGCCSY Trigger: ATATGAACAGCAGCCTCCAGGCAAAGAGCTCAACAAGTACGCCTCCTTAAAGGCAGTAGCTGACAAGGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
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| CDS CAA 90 bp | GCCCAGTCACCATCAGAATTTCCTACTGCCTTTAAGGAGGCGTACTaGTTGAGCTCTTTGCCTGGAGGCTGCTGTTCATATGGATTAGAA | + |
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Preference number: 6 (lower is better) Translates to: AQSPSEFPTAFKEAY*LSSLPGGCCSYGLE Trigger: TTCTAATCCATATGAACAGCAGCCTCCAGGCAAAGAGCTCAACAAGTACGCCTCCTTAAAGGCAGTAGGAAATTCTGATGGTGACTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170672.9 |
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| CDS TCA 72 bp | CAGAATTTCCTACTGCCTTTAAGGAGGCGTACTTGTTaGGCTCTTTGCCTGGAGGCTGCTGTTCATATGGAT | + |
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Preference number: 6 (lower is better) Translates to: QNFLLPLRRRTC*ALCLEAAVHMD Trigger: ATCCATATGAACAGCAGCCTCCAGGCAAAGAGCTCAACAAGTACGCCTCCTTAAAGGCAGTAGGAAATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170672.9 |
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| CDS CAA 72 bp | CCATCAGAATTTCCTACTGCCTTTAAGGAGGCGTACTaGTTGAGCTCTTTGCCTGGAGGCTGCTGTTCATAT | + |
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Preference number: 6 (lower is better) Translates to: PSEFPTAFKEAY*LSSLPGGCCSY Trigger: ATATGAACAGCAGCCTCCAGGCAAAGAGCTCAACAAGTACGCCTCCTTAAAGGCAGTAGGAAATTCTGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170672.9 |
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| CDS CAA 90 bp | TCATCATTGACCTTGTCAGCTACTGCCTTTAAGGAGGCGTACTTGTaGAGCTCTTTGCCTGGAGGCTGCTGTTCATATGGATTAGAAATC | + |
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Preference number: 6 (lower is better) Translates to: SSLTLSATAFKEAYL*SSLPGGCCSYGLEI Trigger: GATTTCTAATCCATATGAACAGCAGCCTCCAGGCAAAGAGCTCAACAAGTACGCCTCCTTAAAGGCAGTAGCTGACAAGGTCAATGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023138.8 |
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| CDS CAA 90 bp | CAGTCACCATCAGAATTTCCTACTGCCTTTAAGGAGGCGTACTTGTaGAGCTCTTTGCCTGGAGGCTGCTGTTCATATGGATTAGAAATC | + |
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Preference number: 6 (lower is better) Translates to: QSPSEFPTAFKEAYL*SSLPGGCCSYGLEI Trigger: GATTTCTAATCCATATGAACAGCAGCCTCCAGGCAAAGAGCTCAACAAGTACGCCTCCTTAAAGGCAGTAGGAAATTCTGATGGTGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170672.9 |
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| CDS CAA 72 bp | TCATCTGAGTGGTATGGAGATTATTTATGGGGGTTCTaGAGTCCATGTTCTCATAATGCTGCACGTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: SSEWYGDYLWGF*SPCSHNAARGP Trigger: TGGTCCACGTGCAGCATTATGAGAACATGGACTCAAGAACCCCCATAAATAATCTCCATACCACTCAGATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023138.8 ENSMUST00000170672.9 |
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