Pregenerated sensors for SHISA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025647Ensembl transcript IDs: ENSMUST00000026737.12, ENSMUST00000112059.10, ENSMUST00000154184.5, ENSMUST00000196954.5, ENSMUST00000197099.5, ENSMUST00000197483.5, ENSMUST00000197689.5, ENSMUST00000198281.2, ENSMUST00000198295.5, ENSMUST00000198376.5, ENSMUST00000198708.5, ENSMUST00000199868.5, ENSMUST00000200515.5, ENSMUST00000200629.5
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATAGTGAACACATGTGGCCCTCTATACAGCCCCGGGAAGGACAGTaGCATCCAGACAGACAGCTGATGGAGAGTGTATGGTGTTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: NSEHMWPSIQPREGQ*HPDRQLMESVWCSA Trigger: GGCAGAACACCATACACTCTCCATCAGCTGTCTGTCTGGATGTCACTGTCCTTCCCGGGGCTGTATAGAGGGCCACATGTGTTCACTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| 3UTR CCA 90 bp | AAAAAGCTTGCTCTCCTAAGTATGACAGGCCATGGCTGGTCACCTTaGGGTGACGTGGGAAATACCTCCTACCTTATTGTTTTTAATTTG | + |
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Preference number: 1 (lower is better) Translates to: KKLALLSMTGHGWSP*GDVGNTSYLIVFNL Trigger: CAAATTAAAAACAATAAGGTAGGAGGTATTTCCCACGTCACCCCAAGGTGACCAGCCATGGCCTGTCATACTTAGGAGAGCAAGCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000200515.5 |
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| 3UTR GCA 90 bp | GGGTCCAATGTTGCATTTATTAGAAATGAGGGTGCGGAGTCTGAATaGTCAGAAACACCAATCAACACAAAGCTAAAACAGCCAGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: GSNVAFIRNEGAESE*SETPINTKLKQPVK Trigger: TTTCACTGGCTGTTTTAGCTTTGTGTTGATTGGTGTTTCTGAGCATTCAGACTCCGCACCCTCATTTCTAATAAATGCAACATTGGACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| 3UTR-3UTR GCA 90 bp | ACATGTGGCCCTCTATACAGCCCCGGGAAGGACAGTGACATCCAGACAGACAGCAGCCACCTGCCTCACTaGCAATGCAGCCAAACCCTG | + |
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Preference number: 2 (lower is better) Translates to: TCGPLYSPGKDSDIQTDSSHLPH*QCSQTL Trigger: CAGGGTTTGGCTGCATTGGCAGTGAGGCAGGTGGCT...GCTGTCTGTCTGGATGTCACTGTCCTTCCCGGGGCTGTATAGAGGGCCACATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGACATCCAGACAGACAGCTGATGGAGAGTGTATGGTGTTCTGCCTGGTGTCACCCCCAGCCACCTaGCTCACTGCCAATGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TVTSRQTADGECMVFCLVSPPAT*LTANAA Trigger: GGCTGCATTGGCAGTGAGGCAGGTGGCTGGGGGTGA...CACCAGGCAGAACACCATACACTCTCCATCAGCTGTCTGTCTGGATGTCACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 |
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| 3UTR-3UTR CCA 90 bp | ACCAGAGTGTGTAGTAGACAGACCGAGGTCCCTGGCCTGGGAGCAGGAGCCAAGAATAGTGAACACATGTaGCCCTCTATACAGCCCCGG | + |
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Preference number: 2 (lower is better) Translates to: TRVCSRQTEVPGLGAGAKNSEHM*PSIQPR Trigger: CCGGGGCTGTATAGAGGGCCACATGTGTTCACTATT...CTTGGCTCCTGCTCCCAGGCCAGGGACCTCGGTCTGTCTACTACACACTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGCTTGCTCTCCTAAGTATGACAGGCCATGGCTGGTCACCTTGGGGTGACCACACACGACATAAATaGCAGCCAAAGAGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: KKLALLSMTGHGWSPWGDHTRHK*QPKRLG Trigger: CCCCAGCCTCTTTGGCTGCCATTTATGTCGTGTGTG...GTCACCCCAAGGTGACCAGCCATGGCCTGTCATACTTAGGAGAGCAAGCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000200515.5 |
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| 3UTR-3UTR CCA 90 bp | TCCAATGTTGCATTTATTAGAAATGAGGGTGCGGAGTCTGAATGCTCAGAAACACCGAGGTCCCTGGCCTaGGAGCAGGAGCCAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SNVAFIRNEGAESECSETPRSLA*EQEPSQ Trigger: CTGGCTTGGCTCCTGCTCCCAGGCCAGGGACCTCGG...TGTTTCTGAGCATTCAGACTCCGCACCCTCATTTCTAATAAATGCAACATTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| 3UTR-3UTR CCA 90 bp | AGCCACATGTCTAGACAAGGCACACACACCACAGACAGCAGTAAAGAACTCTGCCACACACGACATAAATaGCAGCCAAAGAGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SHMSRQGTHTTDSSKELCHTRHK*QPKRLG Trigger: CCCCAGCCTCTTTGGCTGCCATTTATGTCGTGTGTG...GCAGAGTTCTTTACTGCTGTCTGTGGTGTGTGTGCCTTGTCTAGACATGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| 3UTR-3UTR CAA 90 bp | GCCACTGAGTCCCCTTGTCACCTGGTGTCACCCCCAGCCACCTGCCTCACTGCCGAGGAAGAAAACAGGTaGGTCCCGACCCACACTGGT | + |
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Preference number: 3 (lower is better) Translates to: ATESPCHLVSPPATCLTAEEENR*VPTHTG Trigger: ACCAGTGTGGGTCGGGACCAACCTGTTTTCTTCCTC...GGCAGTGAGGCAGGTGGCTGGGGGTGACACCAGGTGACAAGGGGACTCAGTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 |
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| 3UTR CCA 72 bp | GACAGACAGCTGATGGAGAGTGTATGGTGTTCTGCCTaGTGTGACCCCCTGCCACTGAGTCCCCTTGTCACC | + |
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Preference number: 3 (lower is better) Translates to: DRQLMESVWCSA*CDPLPLSPLVT Trigger: GGTGACAAGGGGACTCAGTGGCAGGGGGTCACACCAGGCAGAACACCATACACTCTCCATCAGCTGTCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 |
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| 3UTR-3UTR CAA 90 bp | GCCATGGCTGGTCACCTTGGGGTGACGTGGGAAATACCTCCTACCTTATTGTTTGAGGAAGAAAACAGGTaGGTCCCGACCCACACTGGT | + |
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Preference number: 3 (lower is better) Translates to: AMAGHLGVTWEIPPTLLFEEENR*VPTHTG Trigger: ACCAGTGTGGGTCGGGACCAACCTGTTTTCTTCCTC...AAACAATAAGGTAGGAGGTATTTCCCACGTCACCCCAAGGTGACCAGCCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000200515.5 |
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| 3UTR CCA 72 bp | AAAAAGCTTGCTCTCCTAAGTATGACAGGCCATGGCTaGTCACCTTGGGGTGACGTGGGAAATACCTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: KKLALLSMTGHG*SPWGDVGNTSY Trigger: GTAGGAGGTATTTCCCACGTCACCCCAAGGTGACCAGCCATGGCCTGTCATACTTAGGAGAGCAAGCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000200515.5 |
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| 3UTR CCA 72 bp | GGAGCCAAGCCAGCAAAGGTAGGAAAATTCCCCCAGTaGAGCCTGAATAGTGAACACATGTGGCCCTCTATA | + |
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Preference number: 3 (lower is better) Translates to: GAKPAKVGKFPQ*SLNSEHMWPSI Trigger: TATAGAGGGCCACATGTGTTCACTATTCAGGCTCCACTGGGGGAATTTTCCTACCTTTGCTGGCTTGGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| 3UTR TCA 72 bp | GTCAGGTATTTCTATGAAGATGGTGTCAAGGGAAACTaGCAGTCGGAGGTCAGGTTGTCTGTCCTCCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: VRYFYEDGVKGN*QSEVRLSVLQE Trigger: TTCCTGGAGGACAGACAACCTGACCTCCGACTGTCAGTTTCCCTTGACACCATCTTCATAGAAATACCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| 3UTR GCA 72 bp | CAAGGCACACACACCACAGACAGCAGTAAAGAACTCTaGGTATCACTCACTCACACACGACATAAATGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QGTHTTDSSKEL*VSLTHTRHKWQ Trigger: CTGCCATTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTGTGGTGTGTGTGCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| 3UTR TCA 72 bp | CAAACTGGACTGTGGTACAGGAGTCAGGTATTTCTATaGAGATGGTGTCAAGGGAAACTGACAGTCGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: QTGLWYRSQVFL*RWCQGKLTVGG Trigger: ACCTCCGACTGTCAGTTTCCCTTGACACCATCTTCATAGAAATACCTGACTCCTGTACCACAGTCCAGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| 3UTR GCA 72 bp | GTTGCATTTATTAGAAATGAGGGTGCGGAGTCTGAATaGTCAGAAACACCAATCAACACAAAGCTAAAACAG | + |
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Preference number: 3 (lower is better) Translates to: VAFIRNEGAESE*SETPINTKLKQ Trigger: CTGTTTTAGCTTTGTGTTGATTGGTGTTTCTGAGCATTCAGACTCCGCACCCTCATTTCTAATAAATGCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS-3UTR CCA 90 bp | CCGACCCACACTGGTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCCACAGGGTGGCGGCCCTGTaGGCTGGGCCAGGTAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: PTHTGKTCAYLVNSRGSHRVAAL*AGPGRV Trigger: CACCCTACCTGGCCCAGCCCACAGGGCCGCCACCCT...GTGGCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTTACCAGTGTGGGTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GTCCCGACCCACACTGGTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCAGGGTGGCGGCCCTGTaGGCTGGGCCAGGTAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VPTHTGKTCAYLVNSRGSRVAAL*AGPGRV Trigger: CACCCTACCTGGCCCAGCCCACAGGGCCGCCACCCT...GCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTTACCAGTGTGGGTCGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | CAAGTGAGGAAGAAAACAGGTTGGTCCCGACCCACACTGGTAAGACTTGCGCCTCTGCACAGCTCACCATaGGCACCCGGAGGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: QVRKKTGWSRPTLVRLAPLHSSP*APGGGG Trigger: GCCGCCGCCTCCGGGTGCCCATGGTGAGCTGTGCAG...AGGCGCAAGTCTTACCAGTGTGGGTCGGGACCAACCTGTTTTCTTCCTCACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS-3UTR CCA 90 bp | GAGTCCCCTTGTCACCTGGTGTCACCCCCAGCCACCTGCCTCACTGCCAATGCAGTAGCCCTGGTATGTTaGTCCAGGATAGCTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: ESPCHLVSPPATCLTANAVALVC*SRIAGG Trigger: GCCCCCAGCTATCCTGGACCAACATACCAGGGCTAC...TGCATTGGCAGTGAGGCAGGTGGCTGGGGGTGACACCAGGTGACAAGGGGACTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 |
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| CDS-3UTR CCA 90 bp | GTCCCGACCCACACTGGTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCAGATGGTCACGCCAATaGCGACGGTCGCTCCGAACC | + |
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Preference number: 4 (lower is better) Translates to: VPTHTGKTCAYLVNSRGSRWSRQ*RRSLRT Trigger: GGTTCGGAGCGACCGTCGCCATTGGCGTGACCATCT...GCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTTACCAGTGTGGGTCGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GGTTGGTCCCGACCCACACTGGTAAGACTTGCGCCTACCTGGTCAACAGCAGAGCTGGGCCAGGTAGGGTaGTGGGTACTGCGTTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: GWSRPTLVRLAPTWSTAELGQVG*WVLRWV Trigger: TACCCAACGCAGTACCCACCACCCTACCTGGCCCAG...CTCTGCTGTTGACCAGGTAGGCGCAAGTCTTACCAGTGTGGGTCGGGACCAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | ATAGTGAACACATGTGGCCCTCTATACAGCCCCGGGAAGGACAGTGACATCCAGGGACTCATGGTAGGGTaGCGGCCCTGTGGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: IVNTCGPLYSPGKDSDIQGLMVG*RPCGLG Trigger: GCCCAGCCCACAGGGCCGCCACCCTACCATGAGTCC...CTGGATGTCACTGTCCTTCCCGGGGCTGTATAGAGGGCCACATGTGTTCACTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS-3UTR CCA 90 bp | CTGATGGAGAGTGTATGGTGTTCTGCCTGGTGTGACCCCCTGCCACTGAGTCCCGGGTTGTATGGAGGCTaGCTGGCTCCAGCCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LMESVWCSAWCDPLPLSPGLYGG*LAPAKD Trigger: GTCCTTGGCTGGAGCCAGCCAGCCTCCATACAACCC...GGGACTCAGTGGCAGGGGGTCACACCAGGCAGAACACCATACACTCTCCATCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 |
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| CDS-3UTR CCA 90 bp | CCGACCCACACTGGTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCCACGGGTTGTATGGAGGCTaGCTGGCTCCAGCCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: PTHTGKTCAYLVNSRGSHGLYGG*LAPAKD Trigger: GTCCTTGGCTGGAGCCAGCCAGCCTCCATACAACCC...GTGGCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTTACCAGTGTGGGTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GGTTGGTCCCGACCCACACTGGTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGGGTTGTATGGAGGCTaGCTGGCTCCAGCCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GWSRPTLVRLAPTWSTAEGLYGG*LAPAKD Trigger: GTCCTTGGCTGGAGCCAGCCAGCCTCCATACAACCC...CTCTGCTGTTGACCAGGTAGGCGCAAGTCTTACCAGTGTGGGTCGGGACCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | TGGTCCCGACCCACACTGGTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAAGATGGTCACGCCAATaGCGACGGTCGCTCCGAACC | + |
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Preference number: 4 (lower is better) Translates to: WSRPTLVRLAPTWSTAEERWSRQ*RRSLRT Trigger: GGTTCGGAGCGACCGTCGCCATTGGCGTGACCATCT...TTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTTACCAGTGTGGGTCGGGACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCCACATGTCTAGACAAGGGACTCATGGTAGGGTaGCGGCCCTGTGGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: VRLAPTWSTAEEATCLDKGLMVG*RPCGLG Trigger: GCCCAGCCCACAGGGCCGCCACCCTACCATGAGTCC...CTTGTCTAGACATGTGGCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | AAAAAGCTTGCTCTCCTAAGTATGACAGGCCATGGCTGGTCACCTTGGGGTGACGGACTCATGGTAGGGTaGCGGCCCTGTGGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KKLALLSMTGHGWSPWGDGLMVG*RPCGLG Trigger: GCCCAGCCCACAGGGCCGCCACCCTACCATGAGTCC...GTCACCCCAAGGTGACCAGCCATGGCCTGTCATACTTAGGAGAGCAAGCTTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000200515.5 |
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| CDS-3UTR GCA 90 bp | CCCCAGTGGAGCCTGAATAGTGAACACATGTGGCCCTCTATACAGCCCCGGGAACGGGGGTGGAAAATCTaGTGGACTCTGGCTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: PQWSLNSEHMWPSIQPRERGWKI*WTLAQD Trigger: GTCCTGAGCCAGAGTCCAGCAGATTTTCCACCCCCG...TTCCCGGGGCTGTATAGAGGGCCACATGTGTTCACTATTCAGGCTCCACTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000112059.10 |
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| CDS-3UTR CCA 90 bp | CAAGTGAGGAAGAAAACAGGTTGGTCCCGACCCACACTGGTAAGACTTGCGCCTGGCCAGGTAGGGTGGTaGGTACTGCGTTGGGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: QVRKKTGWSRPTLVRLAPGQVGW*VLRWVG Trigger: CCCTACCCAACGCAGTACCCACCACCCTACCTGGCC...AGGCGCAAGTCTTACCAGTGTGGGTCGGGACCAACCTGTTTTCTTCCTCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | AAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCCACATGTCTAGACAAGGCGGCCAGGTAGGGTGGTaGGTACTGCGTTGGGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: KTCAYLVNSRGSHMSRQGGQVGW*VLRWVG Trigger: CCCTACCCAACGCAGTACCCACCACCCTACCTGGCC...GCCTTGTCTAGACATGTGGCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | TGTCTAGACAAGGCACACACACCACAGACAGCAGTAAAGAACTCTGCGTATCACAGGGTGGCGGCCCTGTaGGCTGGGCCAGGTAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: CLDKAHTPQTAVKNSAYHRVAAL*AGPGRV Trigger: CACCCTACCTGGCCCAGCCCACAGGGCCGCCACCCT...GTGATACGCAGAGTTCTTTACTGCTGTCTGTGGTGTGTGTGCCTTGTCTAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GGCACACACACCACAGACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACAGGACTCATGGTAGGGTaGCGGCCCTGTGGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GTHTTDSSKELCVSLTHTGLMVG*RPCGLG Trigger: GCCCAGCCCACAGGGCCGCCACCCTACCATGAGTCC...TGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTGTGGTGTGTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | ACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAATGGCAGCCTGCACAGCTCACCATaGGCACCCGGAGGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: TAVKNSAYHSLTHDINGSLHSSP*APGGGG Trigger: GCCGCCGCCTCCGGGTGCCCATGGTGAGCTGTGCAG...GCTGCCATTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS-3UTR CCA 90 bp | CTGGTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCCACATGTCTAGACAGATGGTCACGCCAATaGCGACGGTCGCTCCGAACC | + |
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Preference number: 4 (lower is better) Translates to: LVRLAPTWSTAEEATCLDRWSRQ*RRSLRT Trigger: GGTTCGGAGCGACCGTCGCCATTGGCGTGACCATCT...GTCTAGACATGTGGCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTTACCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GGCCATGGCTGGTCACCTTGGGGTGACGTGGGAAATACCTCCTACCTTATTGTTAGATGGTCACGCCAATaGCGACGGTCGCTCCGAACC | + |
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Preference number: 4 (lower is better) Translates to: GHGWSPWGDVGNTSYLIVRWSRQ*RRSLRT Trigger: GGTTCGGAGCGACCGTCGCCATTGGCGTGACCATCT...AACAATAAGGTAGGAGGTATTTCCCACGTCACCCCAAGGTGACCAGCCATGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | AAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCCACATGTCTAGACAAGGCCTGGGCCAGGTAGGGTaGTGGGTACTGCGTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KTCAYLVNSRGSHMSRQGLGQVG*WVLRWV Trigger: TACCCAACGCAGTACCCACCACCCTACCTGGCCCAG...GCCTTGTCTAGACATGTGGCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | ATGTCTAGACAAGGCACACACACCACAGACAGCAGTAAAGAACTCTGCGTATCAAGGGTGGCGGCCCTGTaGGCTGGGCCAGGTAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MSRQGTHTTDSSKELCVSRVAAL*AGPGRV Trigger: CACCCTACCTGGCCCAGCCCACAGGGCCGCCACCCT...TGATACGCAGAGTTCTTTACTGCTGTCTGTGGTGTGTGTGCCTTGTCTAGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | ACAATTTCAAGTGAGGAAGAAAACAGGTTGGTCCCGACCCACACTGGTAAGACTAGGGTGGCGGCCCTGTaGGCTGGGCCAGGTAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TISSEEENRLVPTHTGKTRVAAL*AGPGRV Trigger: CACCCTACCTGGCCCAGCCCACAGGGCCGCCACCCT...AGTCTTACCAGTGTGGGTCGGGACCAACCTGTTTTCTTCCTCACTTGAAATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | ACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAATGGCAGCAGGGTGGCGGCCCTGTaGGCTGGGCCAGGTAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TAVKNSAYHSLTHDINGSRVAAL*AGPGRV Trigger: CACCCTACCTGGCCCAGCCCACAGGGCCGCCACCCT...GCTGCCATTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | CAAGGCACACACACCACAGACAGCAGTAAAGAACTCTGCGTATCACTCACTCACGGCCAGGTAGGGTGGTaGGTACTGCGTTGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGTHTTDSSKELCVSLTHGQVGW*VLRWVG Trigger: CCCTACCCAACGCAGTACCCACCACCCTACCTGGCC...GTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTGTGGTGTGTGTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | CAGACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAATGGCGGACTCATGGTAGGGTaGCGGCCCTGTGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTAVKNSAYHSLTHDINGGLMVG*RPCGLG Trigger: GCCCAGCCCACAGGGCCGCCACCCTACCATGAGTCC...GCCATTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | ACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAATGGCAGCGGACTCATGGTAGGGTaGCGGCCCTGTGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TAVKNSAYHSLTHDINGSGLMVG*RPCGLG Trigger: GCCCAGCCCACAGGGCCGCCACCCTACCATGAGTCC...GCTGCCATTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCCACATGTCTAGACAAGGGGTTGTATGGAGGCTaGCTGGCTCCAGCCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VRLAPTWSTAEEATCLDKGLYGG*LAPAKD Trigger: GTCCTTGGCTGGAGCCAGCCAGCCTCCATACAACCC...CTTGTCTAGACATGTGGCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GCCATGGCTGGTCACCTTGGGGTGACGTGGGAAATACCTCCTACCTTATTGTTTGGGTTGTATGGAGGCTaGCTGGCTCCAGCCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AMAGHLGVTWEIPPTLLFGLYGG*LAPAKD Trigger: GTCCTTGGCTGGAGCCAGCCAGCCTCCATACAACCC...AAACAATAAGGTAGGAGGTATTTCCCACGTCACCCCAAGGTGACCAGCCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000200515.5 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAGCCACCTGCCTCACTGCCAATGCAGCCAAACCCTGGGAATAAAGGCCGGTCACTGTCAAAACTaGATCGAAATTTCAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPSHLPHCQCSQTLGIKAGHCQN*IEISAL Trigger: CAGCGCTGAAATTTCGATCCAGTTTTGACAGTGACC...GGCCTTTATTCCCAGGGTTTGGCTGCATTGGCAGTGAGGCAGGTGGCTGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS-3UTR CCA 90 bp | GGCACACACACCACAGACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACAAGATGGTCACGCCAATaGCGACGGTCGCTCCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GTHTTDSSKELCVSLTHTRWSRQ*RRSLRT Trigger: GGTTCGGAGCGACCGTCGCCATTGGCGTGACCATCT...TGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTGTGGTGTGTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | CACACACCACAGACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACAGATGGTCACGCCAATaGCGACGGTCGCTCCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: HTPQTAVKNSAYHSLTHDRWSRQ*RRSLRT Trigger: GGTTCGGAGCGACCGTCGCCATTGGCGTGACCATCT...GTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTGTGGTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCCACATGTCTAGACAAGGTAGCCCTGGTATGTTaGTCCAGGATAGCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRLAPTWSTAEEATCLDKVALVC*SRIAGG Trigger: GCCCCCAGCTATCCTGGACCAACATACCAGGGCTAC...CTTGTCTAGACATGTGGCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | TCAGGTTGTCTGTCCTCCAGGAACCAGGGATTTCAACCTCACACCAATTATCACGGCCAGGTAGGGTGGTaGGTACTGCGTTGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGCLSSRNQGFQPHTNYHGQVGW*VLRWVG Trigger: CCCTACCCAACGCAGTACCCACCACCCTACCTGGCC...GTGATAATTGGTGTGAGGTTGAAATCCCTGGTTCCTGGAGGACAGACAACCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS-3UTR CCA 90 bp | CTAGACAAGGCACACACACCACAGACAGCAGTAAAGAACTCTGCGTATCACTCAGGCCAGGTAGGGTGGTaGGTACTGCGTTGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDKAHTPQTAVKNSAYHSGQVGW*VLRWVG Trigger: CCCTACCCAACGCAGTACCCACCACCCTACCTGGCC...TGAGTGATACGCAGAGTTCTTTACTGCTGTCTGTGGTGTGTGTGCCTTGTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GGCACACACACCACAGACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACTGGGCCAGGTAGGGTaGTGGGTACTGCGTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GTHTTDSSKELCVSLTHTLGQVG*WVLRWV Trigger: TACCCAACGCAGTACCCACCACCCTACCTGGCCCAG...TGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTGTGGTGTGTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | CAAGGCACACACACCACAGACAGCAGTAAAGAACTCTGCGTATCACTCACTCACGGGTTGTATGGAGGCTaGCTGGCTCCAGCCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QGTHTTDSSKELCVSLTHGLYGG*LAPAKD Trigger: GTCCTTGGCTGGAGCCAGCCAGCCTCCATACAACCC...GTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTGTGGTGTGTGTGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GTCCCGACCCACACTGGTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCATCAGGACAGAACACTaGGATCGAATTGTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VPTHTGKTCAYLVNSRGSIRTEH*DRIVFT Trigger: GGTGAAGACAATTCGATCCCAGTGTTCTGTCCTGAT...GCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTTACCAGTGTGGGTCGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS-3UTR CCA 90 bp | ATGGCTGGTCACCTTGGGGTGACGTGGGAAATACCTCCTACCTTATTGTTTTTAGGCCAGGTAGGGTGGTaGGTACTGCGTTGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MAGHLGVTWEIPPTLLFLGQVGW*VLRWVG Trigger: CCCTACCCAACGCAGTACCCACCACCCTACCTGGCC...TAAAAACAATAAGGTAGGAGGTATTTCCCACGTCACCCCAAGGTGACCAGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | ACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAATGGCAGCGGCCAGGTAGGGTGGTaGGTACTGCGTTGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TAVKNSAYHSLTHDINGSGQVGW*VLRWVG Trigger: CCCTACCCAACGCAGTACCCACCACCCTACCTGGCC...GCTGCCATTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | AAATTTCAGAAAGTACAATTTCAAGTGAGGAAGAAAACAGGTTGGTCCCGACCCAGGGTGGCGGCCCTGTaGGCTGGGCCAGGTAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KFQKVQFQVRKKTGWSRPRVAAL*AGPGRV Trigger: CACCCTACCTGGCCCAGCCCACAGGGCCGCCACCCT...GGGTCGGGACCAACCTGTTTTCTTCCTCACTTGAAATTGTACTTTCTGAAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR TCA 90 bp | AAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCCACATGTCTAGACAAGGCTCGAAATTTCAGCGCTaGACCCAGATGTTCGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KTCAYLVNSRGSHMSRQGSKFQR*TQMFGC Trigger: ACACCCGAACATCTGGGTTCAGCGCTGAAATTTCGA...GCCTTGTCTAGACATGTGGCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | ACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAATGGCAGCCTGGGCCAGGTAGGGTaGTGGGTACTGCGTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TAVKNSAYHSLTHDINGSLGQVG*WVLRWV Trigger: TACCCAACGCAGTACCCACCACCCTACCTGGCCCAG...GCTGCCATTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | CAGACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAATGGCCTGGGCCAGGTAGGGTaGTGGGTACTGCGTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QTAVKNSAYHSLTHDINGLGQVG*WVLRWV Trigger: TACCCAACGCAGTACCCACCACCCTACCTGGCCCAG...GCCATTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | CATGGCTGGTCACCTTGGGGTGACGTGGGAAATACCTCCTACCTTATTGTTTTTTCTCCTCCGCGGGGGTaGAAAATCTGCTGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HGWSPWGDVGNTSYLIVFSPPRG*KICWTL Trigger: CAGAGTCCAGCAGATTTTCCACCCCCGCGGAGGAGA...AAAAACAATAAGGTAGGAGGTATTTCCCACGTCACCCCAAGGTGACCAGCCATG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000112059.10 |
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| CDS-3UTR TCA 90 bp | GCCATGGCTGGTCACCTTGGGGTGACGTGGGAAATACCTCCTACCTTATTGTTTTCGAAATTTCAGCGCTaGACCCAGATGTTCGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AMAGHLGVTWEIPPTLLFSKFQR*TQMFGC Trigger: ACACCCGAACATCTGGGTTCAGCGCTGAAATTTCGA...AAACAATAAGGTAGGAGGTATTTCCCACGTCACCCCAAGGTGACCAGCCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | ACAATTTCAAGTGAGGAAGAAAACAGGTTGGTCCCGACCCACACTGGTAAGACTGTAGCCCTGGTATGTTaGTCCAGGATAGCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TISSEEENRLVPTHTGKTVALVC*SRIAGG Trigger: GCCCCCAGCTATCCTGGACCAACATACCAGGGCTAC...AGTCTTACCAGTGTGGGTCGGGACCAACCTGTTTTCTTCCTCACTTGAAATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | ACATGTCTAGACAAGGCACACACACCACAGACAGCAGTAAAGAACTCTGCGTATGTAGCCCTGGTATGTTaGTCCAGGATAGCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCLDKAHTPQTAVKNSAYVALVC*SRIAGG Trigger: GCCCCCAGCTATCCTGGACCAACATACCAGGGCTAC...ATACGCAGAGTTCTTTACTGCTGTCTGTGGTGTGTGTGCCTTGTCTAGACATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | AGTACAATTTCAAGTGAGGAAGAAAACAGGTTGGTCCCGACCCACACTGGTAAGGTAGCCCTGGTATGTTaGTCCAGGATAGCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: STISSEEENRLVPTHTGKVALVC*SRIAGG Trigger: GCCCCCAGCTATCCTGGACCAACATACCAGGGCTAC...CTTACCAGTGTGGGTCGGGACCAACCTGTTTTCTTCCTCACTTGAAATTGTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | ACCACAGACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAAGGGTTGTATGGAGGCTaGCTGGCTCCAGCCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TTDSSKELCVSLTHTRHKGLYGG*LAPAKD Trigger: GTCCTTGGCTGGAGCCAGCCAGCCTCCATACAACCC...TTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GGGTCCAATGTTGCATTTATTAGAAATGAGGGTGCGGAGTCTGAATGCTCAGAATCTCCTCCGCGGGGGTaGAAAATCTGGACTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSNVAFIRNEGAESECSESPPRG*KIWTLA Trigger: AGCCAGAGTCCAGATTTTCCACCCCCGCGGAGGAGA...TTCTGAGCATTCAGACTCCGCACCCTCATTTCTAATAAATGCAACATTGGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026737.12 |
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| CDS-3UTR CCA 90 bp | ACCACAGACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAAGTAGCCCTGGTATGTTaGTCCAGGATAGCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTDSSKELCVSLTHTRHKVALVC*SRIAGG Trigger: GCCCCCAGCTATCCTGGACCAACATACCAGGGCTAC...TTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | GTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAATGGCAGCCAAAGAGTAGCCCTGGTATGTTaGTCCAGGATAGCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VKNSAYHSLTHDINGSQRVALVC*SRIAGG Trigger: GCCCCCAGCTATCCTGGACCAACATACCAGGGCTAC...TCTTTGGCTGCCATTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | AAACTGACAGTCGGAGGTCAGGTTGTCTGTCCTCCAGGAACCAGGGATTTCAACATCAGGACAGAACACTaGGATCGAATTGTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KLTVGGQVVCPPGTRDFNIRTEH*DRIVFT Trigger: GGTGAAGACAATTCGATCCCAGTGTTCTGTCCTGAT...GTTGAAATCCCTGGTTCCTGGAGGACAGACAACCTGACCTCCGACTGTCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
||
| CDS-3UTR CCA 90 bp | GTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCCACATGTCTAGACAAGATTTCCTCATTCCACTaGATTTTCCTCAGCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRLAPTWSTAEEATCLDKISSFH*IFLSTS Trigger: GGACGTGCTGAGGAAAATCCAGTGGAATGAGGAAAT...CTTGTCTAGACATGTGGCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
||
| CDS-3UTR CCA 90 bp | AGGTTGTCTGTCCTCCAGGAACCAGGGATTTCAACCTCACACCAATTATCACACTCCGAGCAGCAGTATTaGTTGGAACAGGAACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RLSVLQEPGISTSHQLSHSEQQY*LEQEPQ Trigger: TTGTGGTTCCTGTTCCAACCAATACTGCTGCTCGGA...GTGTGATAATTGGTGTGAGGTTGAAATCCCTGGTTCCTGGAGGACAGACAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
||
| CDS-3UTR TCA 90 bp | ACCACAGACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAATCGAAATTTCAGCGCTaGACCCAGATGTTCGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTDSSKELCVSLTHTRHKSKFQR*TQMFGC Trigger: ACACCCGAACATCTGGGTTCAGCGCTGAAATTTCGA...TTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000200515.5 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAATGGCAGCGGAAAATCTGGACTCTaGCTCAGGACACATTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TAVKNSAYHSLTHDINGSGKSGL*LRTHFL Trigger: GAGGAAATGTGTCCTGAGCCAGAGTCCAGATTTTCC...GCTGCCATTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026737.12 |
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| CDS-3UTR CCA 90 bp | AGGTCAGGTTGTCTGTCCTCCAGGAACCAGGGATTTCAACCTCACACCAATTATGGTCACTGTCAAAACTaGATCGAAATTTCAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: RSGCLSSRNQGFQPHTNYGHCQN*IEISAL Trigger: CAGCGCTGAAATTTCGATCCAGTTTTGACAGTGACC...ATAATTGGTGTGAGGTTGAAATCCCTGGTTCCTGGAGGACAGACAACCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS-3UTR CCA 90 bp | CAGACAGCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAATGGCAAATCTGCTGGACTCTaGCTCAGGACACATTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QTAVKNSAYHSLTHDINGKSAGL*LRTHFL Trigger: GAGGAAATGTGTCCTGAGCCAGAGTCCAGCAGATTT...GCCATTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGCTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112059.10 |
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| 3UTR CAA 72 bp | TCAGAAAGTACAATTTCAAGTGAGGAAGAAAACAGGTaGGTCCCGACCCACACTGGTAAGACTTGCGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: SESTISSEEENR*VPTHTGKTCAY Trigger: GTAGGCGCAAGTCTTACCAGTGTGGGTCGGGACCAACCTGTTTTCTTCCTCACTTGAAATTGTACTTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS-3UTR CCA 90 bp | ATGGCTGGTCACCTTGGGGTGACGTGGGAAATACCTCCTACCTTATTGTTTTTAATTTCCTCATTCCACTaGATTTTCCTCAGCACGTCC | + |
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Preference number: 4 (lower is better) Translates to: MAGHLGVTWEIPPTLLFLISSFH*IFLSTS Trigger: GGACGTGCTGAGGAAAATCCAGTGGAATGAGGAAAT...TAAAAACAATAAGGTAGGAGGTATTTCCCACGTCACCCCAAGGTGACCAGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS-3UTR CCA 90 bp | GCAGTAAAGAACTCTGCGTATCACTCACTCACACACGACATAAATGGCAGCCAAGGTCACTGTCAAAACTaGATCGAAATTTCAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: AVKNSAYHSLTHDINGSQGHCQN*IEISAL Trigger: CAGCGCTGAAATTTCGATCCAGTTTTGACAGTGACC...TTGGCTGCCATTTATGTCGTGTGTGAGTGAGTGATACGCAGAGTTCTTTACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000200515.5 |
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| CDS-3UTR CAA 90 bp | CCCCAGTGGAGCCTGAATAGTGAACACATGTGGCCCTCTATACAGCCCCGGGAAGGCCACAGGTTGAGGTaGAGGCTGAGGGTAAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: PQWSLNSEHMWPSIQPREGHRLR*RLRVRG Trigger: GCCCCTTACCCTCAGCCTCAACCTCAACCTGTGGCC...TTCCCGGGGCTGTATAGAGGGCCACATGTGTTCACTATTCAGGCTCCACTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS-3UTR CAA 90 bp | TGGTCCCGACCCACACTGGTAAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGGCCACAGGTTGAGGTaGAGGCTGAGGGTAAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: WSRPTLVRLAPTWSTAEEGHRLR*RLRVRG Trigger: GCCCCTTACCCTCAGCCTCAACCTCAACCTGTGGCC...TTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTTACCAGTGTGGGTCGGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000200515.5 |
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| CDS GCA 90 bp | AATCAGGACAGAACACTGGGATCGAATTGTCTTCACCAAAGGGCCTaGACAGCTCACCATGGGCACCCGGAGGCGGCGGCAGCAGCAACA | + |
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Preference number: 5 (lower is better) Translates to: NQDRTLGSNCLHQRA*TAHHGHPEAAAAAT Trigger: TGTTGCTGCTGCCGCCGCCTCCGGGTGCCCATGGTGAGCTGTGCAGGCCCTTTGGTGAAGACAATTCGATCCCAGTGTTCTGTCCTGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS-3UTR CAA 90 bp | TGCGTATCACTCACTCACACACGACATAAATGGCAGCCAAAGAGGCTGGGGGCAGGCCACAGGTTGAGGTaGAGGCTGAGGGTAAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: CVSLTHTRHKWQPKRLGAGHRLR*RLRVRG Trigger: GCCCCTTACCCTCAGCCTCAACCTCAACCTGTGGCC...TGCCCCCAGCCTCTTTGGCTGCCATTTATGTCGTGTGTGAGTGAGTGATACGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 |
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| CDS CCA 90 bp | ATTTCAGCGCTGAACCCAGATGTTCGGGTGTCTCCTCCGCGGGGGTaGAAAATCTGGACTCTGGCTCAGGACACATTTCCTCATTCCACT | + |
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Preference number: 5 (lower is better) Translates to: ISALNPDVRVSPPRG*KIWTLAQDTFPHST Trigger: AGTGGAATGAGGAAATGTGTCCTGAGCCAGAGTCCAGATTTTCCACCCCCGCGGAGGAGACACCCGAACATCTGGGTTCAGCGCTGAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026737.12 |
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| CDS-3UTR CAA 90 bp | AAGACTTGCGCCTACCTGGTCAACAGCAGAGGAAGCCACATGTCTAGACAAGGCGAGCAGCAGTATTGGTaGGAACAGGAACCACAACAG | + |
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Preference number: 5 (lower is better) Translates to: KTCAYLVNSRGSHMSRQGEQQYW*EQEPQQ Trigger: CTGTTGTGGTTCCTGTTCCAACCAATACTGCTGCTC...GCCTTGTCTAGACATGTGGCTTCCTCTGCTGTTGACCAGGTAGGCGCAAGTCTT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS CCA 90 bp | CATTCCACTGGATTTTCCTCAGCACGTCCGAGCAGCAGTATTGGTTaGAACAGGAACCACAACAGAAATCAGGACAGAACACTGGGATCG | + |
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Preference number: 5 (lower is better) Translates to: HSTGFSSARPSSSIG*NRNHNRNQDRTLGS Trigger: CGATCCCAGTGTTCTGTCCTGATTTCTGTTGTGGTTCCTGTTCCAACCAATACTGCTGCTCGGACGTGCTGAGGAAAATCCAGTGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000198281.2 |
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| CDS CCA 90 bp | TCCTCATTCCACTGGATTTTCCTCAGCACGTCCGAGCAGCAGTATTaGTTGGAACAGGAACCACAACAGAAATCAGGACAGAACACTGGG | + |
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Preference number: 5 (lower is better) Translates to: SSFHWIFLSTSEQQY*LEQEPQQKSGQNTG Trigger: CCCAGTGTTCTGTCCTGATTTCTGTTGTGGTTCCTGTTCCAACCAATACTGCTGCTCGGACGTGCTGAGGAAAATCCAGTGGAATGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000198281.2 |
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| CDS CCA 90 bp | GTGGAAAATCTGGACTCTGGCTCAGGACACATTTCCTCATTCCACTaGATTTTCCTCAGCACGTCCGAGCAGCAGTATTGGTTGGAACAG | + |
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Preference number: 5 (lower is better) Translates to: VENLDSGSGHISSFH*IFLSTSEQQYWLEQ Trigger: CTGTTCCAACCAATACTGCTGCTCGGACGTGCTGAGGAAAATCCAGTGGAATGAGGAAATGTGTCCTGAGCCAGAGTCCAGATTTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000198281.2 |
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| CDS CCA 90 bp | GAAAATCTGCTGGACTCTGGCTCAGGACACATTTCCTCATTCCACTaGATTTTCCTCAGCACGTCCGAGCAGCAGTATTGGTTGGAACAG | + |
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Preference number: 5 (lower is better) Translates to: ENLLDSGSGHISSFH*IFLSTSEQQYWLEQ Trigger: CTGTTCCAACCAATACTGCTGCTCGGACGTGCTGAGGAAAATCCAGTGGAATGAGGAAATGTGTCCTGAGCCAGAGTCCAGCAGATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112059.10 |
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| CDS-3UTR CAA 90 bp | GAAGAAAGGGGAAGCGGGTCCAATGTTGCATTTATTAGAAATGAGGGTGCGGAGGAGCAGCAGTATTGGTaGGAACAGGAACCACAACAG | + |
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Preference number: 5 (lower is better) Translates to: EERGSGSNVAFIRNEGAEEQQYW*EQEPQQ Trigger: CTGTTGTGGTTCCTGTTCCAACCAATACTGCTGCTC...CTCCGCACCCTCATTTCTAATAAATGCAACATTGGACCCGCTTCCCCTTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112059.10 |
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| CDS GCA 72 bp | AGAACACTGGGATCGAATTGTCTTCACCAAAGGGCCTaGACAGCTCACCATGGGCACCCGGAGGCGGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: RTLGSNCLHQRA*TAHHGHPEAAA Trigger: TGCCGCCGCCTCCGGGTGCCCATGGTGAGCTGTGCAGGCCCTTTGGTGAAGACAATTCGATCCCAGTGTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 |
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| CDS GCA 72 bp | GATGTTCGGGTGTCTCCTCCGCGGGGGTGGAAAATCTaGTGGACTCTGGCTCAGGACACATTTCCTCATTCC | + |
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Preference number: 6 (lower is better) Translates to: DVRVSPPRGWKI*WTLAQDTFPHS Trigger: GGAATGAGGAAATGTGTCCTGAGCCAGAGTCCAGCAGATTTTCCACCCCCGCGGAGGAGACACCCGAACATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112059.10 |
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| CDS CCA 72 bp | CTGAACCCAGATGTTCGGGTGTCTCCTCCGCGGGGGTaGAAAATCTGGACTCTGGCTCAGGACACATTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LNPDVRVSPPRG*KIWTLAQDTFP Trigger: AGGAAATGTGTCCTGAGCCAGAGTCCAGATTTTCCACCCCCGCGGAGGAGACACCCGAACATCTGGGTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026737.12 |
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| CDS CCA 72 bp | CTGAACCCAGATGTTCGGGTGTCTCCTCCGCGGGGGTaGAAAATCTGCTGGACTCTGGCTCAGGACACATTT | + |
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Preference number: 6 (lower is better) Translates to: LNPDVRVSPPRG*KICWTLAQDTF Trigger: AAATGTGTCCTGAGCCAGAGTCCAGCAGATTTTCCACCCCCGCGGAGGAGACACCCGAACATCTGGGTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112059.10 |
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| CDS TCA 72 bp | AGGGTCACTGTCAAAACTGGATCGAAATTTCAGCGCTaGACCCAGATGTTCGGGTGTCTCCTCCGCGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: RVTVKTGSKFQR*TQMFGCLLRGG Trigger: ACCCCCGCGGAGGAGACACCCGAACATCTGGGTTCAGCGCTGAAATTTCGATCCAGTTTTGACAGTGACCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000197099.5 ENSMUST00000200515.5 |
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| CDS TCA 72 bp | GTCTTCACCAAAGGGCCTGCACAGCTCACCATGGGCTaGAGCATAGAGAGACAGGCTTGTTCTCCTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: VFTKGPAQLTMG*SIERQACSPLS Trigger: GGACAGAGGAGAACAAGCCTGTCTCTCTATGCTTCAGCCCATGGTGAGCTGTGCAGGCCCTTTGGTGAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198281.2 |
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| CDS CAA 72 bp | CACGGTAGTAGTTGTGGTGTTGGTCACGACAGGGCGTaGGGGGCAGCACATCTTATACAGACAGCAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: HGSSCGVGHDRA*GAAHLIQTAAG Trigger: TCCTGCTGCTGTCTGTATAAGATGTGCTGCCCCCAACGCCCTGTCGTGACCAACACCACAACTACTACCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000154184.5 ENSMUST00000196954.5 ENSMUST00000197099.5 ENSMUST00000197483.5 ENSMUST00000197689.5 ENSMUST00000198295.5 ENSMUST00000198376.5 ENSMUST00000198708.5 ENSMUST00000199868.5 ENSMUST00000200515.5 ENSMUST00000200629.5 |
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| CDS TCA 72 bp | GATGGTCACGCCAATGGCGACGGTCGCTCCGAACCCTaGCATAGGGTCACTGTCAAAACTGGATCGAAATTT | + |
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Preference number: 6 (lower is better) Translates to: DGHANGDGRSEP*HRVTVKTGSKF Trigger: AAATTTCGATCCAGTTTTGACAGTGACCCTATGTCAGGGTTCGGAGCGACCGTCGCCATTGGCGTGACCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000197099.5 ENSMUST00000200515.5 |
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| CDS CCA 72 bp | CTGGACTCTGGCTCAGGACACATTTCCTCATTCCACTaGATTTTCCTCAGCACGTCCGAGCAGCAGTATTGG | + |
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Preference number: 6 (lower is better) Translates to: LDSGSGHISSFH*IFLSTSEQQYW Trigger: CCAATACTGCTGCTCGGACGTGCTGAGGAAAATCCAGTGGAATGAGGAAATGTGTCCTGAGCCAGAGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000198281.2 |
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| CDS CCA 72 bp | TGTCTCCTCCGCGGGGGTGGAAAATCTGCTGGACTCTaGCTCAGGACACATTTCCTCATTCCACTGGATTTT | + |
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Preference number: 6 (lower is better) Translates to: CLLRGGGKSAGL*LRTHFLIPLDF Trigger: AAAATCCAGTGGAATGAGGAAATGTGTCCTGAGCCAGAGTCCAGCAGATTTTCCACCCCCGCGGAGGAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112059.10 |
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| CDS GCA 72 bp | AGAACACTGGGATCGAATTGTCTTCACCAAAGGGCCTaGACAGCTCACCATGGGCTGAAGCATAGAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: RTLGSNCLHQRA*TAHHGLKHRET Trigger: TGTCTCTCTATGCTTCAGCCCATGGTGAGCTGTGCAGGCCCTTTGGTGAAGACAATTCGATCCCAGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198281.2 |
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| CDS CAA 72 bp | CCACAACAGAAATCAGGACAGAACACTGGGATCGAATaGTCTTCACCAAAGGGCCTGCACAGCTCACCATGG | + |
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Preference number: 6 (lower is better) Translates to: PQQKSGQNTGIE*SSPKGLHSSPW Trigger: CCATGGTGAGCTGTGCAGGCCCTTTGGTGAAGACAATTCGATCCCAGTGTTCTGTCCTGATTTCTGTTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000198281.2 |
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| CDS CCA 72 bp | GGAACAGGAACCACAACAGAAATCAGGACAGAACACTaGGATCGAATTGTCTTCACCAAAGGGCCTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: GTGTTTEIRTEH*DRIVFTKGPAQ Trigger: CTGTGCAGGCCCTTTGGTGAAGACAATTCGATCCCAGTGTTCTGTCCTGATTTCTGTTGTGGTTCCTGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000198281.2 |
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| CDS CAA 90 bp | TCATTCCACTGGATTTTCCTCAGCACGTCCGAGCAGCAGTATTGGTaGGAACAGGAACCACAACAGAAATCAGGACAGAACACTGGGATC | + |
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Preference number: 6 (lower is better) Translates to: SFHWIFLSTSEQQYW*EQEPQQKSGQNTGI Trigger: GATCCCAGTGTTCTGTCCTGATTTCTGTTGTGGTTCCTGTTCCAACCAATACTGCTGCTCGGACGTGCTGAGGAAAATCCAGTGGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000198281.2 |
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| CDS CAA 90 bp | TTCCTCATTCCACTGGATTTTCCTCAGCACGTCCGAGCAGCAGTATaGGTTGGAACAGGAACCACAACAGAAATCAGGACAGAACACTGG | + |
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Preference number: 6 (lower is better) Translates to: FLIPLDFPQHVRAAV*VGTGTTTEIRTEHW Trigger: CCAGTGTTCTGTCCTGATTTCTGTTGTGGTTCCTGTTCCAACCAATACTGCTGCTCGGACGTGCTGAGGAAAATCCAGTGGAATGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026737.12 ENSMUST00000112059.10 ENSMUST00000198281.2 |
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