Pregenerated sensors for SHF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033256Ensembl transcript IDs: ENSMUST00000048635.13, ENSMUST00000110530.9, ENSMUST00000110531.9, ENSMUST00000110532.9, ENSMUST00000121237.2, ENSMUST00000125826.8, ENSMUST00000139819.8, ENSMUST00000143484.2, ENSMUST00000151130.8
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTGGTGCGGGAGGGAGGTCGCCACTCCCTCCCTAGTGTCTGACTaGGGCGGGGAGACCCCTTCCTCCTCAGGCTCTCCTCGGTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: GWCGREVATPSLVSD*GGETPSSSGSPRCP Trigger: TGGGCACCGAGGAGAGCCTGAGGAGGAAGGGGTCTCCCCGCCCCAGTCAGACACTAGGGAGGGAGTGGCGACCTCCCTCCCGCACCACCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 |
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| 3UTR CCA 90 bp | GCGGCTGGCATAGTGGTGCACGATTTCAGGGACGCTGCTGAAGGGTaGGCTGTTCTGGCCCAACACATACTTGTGTTCCTTAGTCCGGGA | + |
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Preference number: 1 (lower is better) Translates to: AAGIVVHDFRDAAEG*AVLAQHILVFLSPG Trigger: TCCCGGACTAAGGAACACAAGTATGTGTTGGGCCAGAACAGCCCACCCTTCAGCAGCGTCCCTGAAATCGTGCACCACTATGCCAGCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| 3UTR CCA 90 bp | CATGTCCTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTaGGTCCAGGTCTATCATAGTGCCCTGGTCTCACATCTACAGAGT | + |
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Preference number: 1 (lower is better) Translates to: HVLGKNRCPRAGDKD*VQVYHSALVSHLQS Trigger: ACTCTGTAGATGTGAGACCAGGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGACATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| 3UTR-3UTR GCA 90 bp | CGTCGGCTCCAGCCTCAATTTATAGTCGGGCTCGCTCCCCGCCCCCTCCCGGCAGCGGAGGGTGGGTGGTaGGGGAGGGAGGTCGCCACT | + |
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Preference number: 2 (lower is better) Translates to: RRLQPQFIVGLAPRPLPAAEGGW*GREVAT Trigger: AGTGGCGACCTCCCTCCCGCACCACCCACCCTCCGC...TGCCGGGAGGGGGCGGGGAGCGAGCCCGACTATAAATTGAGGCTGGAGCCGACG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 |
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| 3UTR-3UTR TCA 90 bp | CTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCTCCCTCCCTAGTGTCTaGCTGGGGCGGGGAGACCCC | + |
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Preference number: 2 (lower is better) Translates to: LGAQLHTVPLFQGPGFPPSLPSV*LGRGDP Trigger: GGGGTCTCCCCGCCCCAGTCAGACACTAGGGAGGGA...GGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCACAGGGTAGAGCAGGGACATGTGTTCCGCTCCCTTAATGGGCAGCTTGCGTTTCAGGGACGCTGCTaGAGGGTGGGCTGTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GHRVEQGHVFRSLNGQLAFQGRC*RVGCSG Trigger: GCCAGAACAGCCCACCCTTCAGCAGCGTCCCTGAAA...CGCAAGCTGCCCATTAAGGGAGCGGAACACATGTCCCTGCTCTACCCTGTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| 3UTR-3UTR TCA 90 bp | CATCTACAGAGTCCGGATGGCCACAGGGTAGAGCAGGGACATGTGTTCCGCTCCATGTGCATGAAGCCCTaGCTGCTCTTGAGGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: HLQSPDGHRVEQGHVFRSMCMKP*LLLRER Trigger: TCTCTCCCTCAAGAGCAGTCAGGGCTTCATGCACAT...GGAGCGGAACACATGTCCCTGCTCTACCCTGTGGCCATCCGGACTCTGTAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTCCAGGTCTATCATAGTGCCCTGGTCTCACATCTACAGAGTCCGGATGGCCATGTGCATGAAGCCCTaGCTGCTCTTGAGGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: GSRSIIVPWSHIYRVRMAMCMKP*LLLRER Trigger: TCTCTCCCTCAAGAGCAGTCAGGGCTTCATGCACAT...GGCCATCCGGACTCTGTAGATGTGAGACCAGGGCACTATGATAGACCTGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCATGTCCAGCCCTGACTGCTCTTaGGGGAGAGAGAGAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: QRLLDPRTRGSQVSDIMSSPDCS*GRERSH Trigger: ATGACTTCTCTCTCTCCCTCAAGAGCAGTCAGGGCT...GGACATGATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTCCAGGTCTATCATAGTGCCCTGGTCTCACATCTACAGAGTCCGGATGGCCGCAGGTGACAAGGACTaGGTCCAGGTCTATCATAGT | + |
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Preference number: 2 (lower is better) Translates to: GSRSIIVPWSHIYRVRMAAGDKD*VQVYHS Trigger: ACTATGATAGACCTGGACCCAGTCCTTGTCACCTGC...GGCCATCCGGACTCTGTAGATGTGAGACCAGGGCACTATGATAGACCTGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| 3UTR-3UTR CCA 90 bp | AATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCGCAGGTGACAAGGACTaGGTCCAGGTCTATCATAGT | + |
|
Preference number: 2 (lower is better) Translates to: NLQRLLDPRTRGSQVSDIAGDKD*VQVYHS Trigger: ACTATGATAGACCTGGACCCAGTCCTTGTCACCTGC...GATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| 3UTR-3UTR CCA 90 bp | TATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCTGGGCAGCTTGCGGCTaGCATAGTGGTGCACGATTT | + |
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Preference number: 2 (lower is better) Translates to: YNKLRNLQRLLDPRTRGSWAACG*HSGARF Trigger: AAATCGTGCACCACTATGCCAGCCGCAAGCTGCCCA...GCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGGCAGGTGACAAGGACTaGGTCCAGGTCTATCATAGT | + |
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Preference number: 2 (lower is better) Translates to: TVPLFQGPGFPPLYNKLRAGDKD*VQVYHS Trigger: ACTATGATAGACCTGGACCCAGTCCTTGTCACCTGC...CCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| 3UTR CCA 72 bp | GGGAGGGAGGTCGCCACTCCCTCCCTAGTGTCTGACTaGGGCGGGGAGACCCCTTCCTCCTCAGGCTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: GREVATPSLVSD*GGETPSSSGSP Trigger: AGGAGAGCCTGAGGAGGAAGGGGTCTCCCCGCCCCAGTCAGACACTAGGGAGGGAGTGGCGACCTCCCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 |
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| 3UTR TCA 72 bp | GGCTGGCATAGTGGTGCACGATTTCAGGGACGCTGCTaGAGGGTGGGCTGTTCTGGCCCAACACATACTTGT | + |
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Preference number: 3 (lower is better) Translates to: GWHSGARFQGRC*RVGCSGPTHTC Trigger: ACAAGTATGTGTTGGGCCAGAACAGCCCACCCTTCAGCAGCGTCCCTGAAATCGTGCACCACTATGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| CDS-3UTR TCA 90 bp | CGTCGGCTCCAGCCTCAATTTATAGTCGGGCTCGCTCCCCGCCCCCTCCCGGCATTTCAGGGACGCTGCTaGAGGGTGGGCTGTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRLQPQFIVGLAPRPLPAFQGRC*RVGCSG Trigger: GCCAGAACAGCCCACCCTTCAGCAGCGTCCCTGAAA...TGCCGGGAGGGGGCGGGGAGCGAGCCCGACTATAAATTGAGGCTGGAGCCGACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 |
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| CDS-3UTR TCA 90 bp | ACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCCTCCTCCCGGCCAGGTaGCAGGCAGTTCTCCGATCC | + |
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Preference number: 4 (lower is better) Translates to: TAAPVQVTRTGSRSIIVPLLPAR*QAVLRS Trigger: GGATCGGAGAACTGCCTGTCACCTGGCCGGGAGGAG...GGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCTGGACTCCCCCAGGGGGCTaGTGGGTTCCATGCCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: AAPVQVTRTGSRSIIVPWTPPGG*WVPCLG Trigger: CCCTAGGCATGGAACCCAGCAGCCCCCTGGGGGAGT...CCAGGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | ACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCACTCCCCCAGGGGGCTaGTGGGTTCCATGCCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: TAAPVQVTRTGSRSIIVPTPPGG*WVPCLG Trigger: CCCTAGGCATGGAACCCAGCAGCCCCCTGGGGGAGT...GGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | CATGTCCTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGCCAACCTGTCGCTGCTaGCAGGGGGTCCGGAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: HVLGKNRCPRAGDKDWVQPTCRC*QGVRSP Trigger: CGGACTCCGGACCCCCTGCCAGCAGCGACAGGTTGG...CTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGACATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR TCA 90 bp | TCCTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTCTCCTCCCGGCCAGGTaGCAGGCAGTTCTCCGATCC | + |
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Preference number: 4 (lower is better) Translates to: SLVRTAAPVQVTRTGSRSLLPAR*QAVLRS Trigger: GGATCGGAGAACTGCCTGTCACCTGGCCGGGAGGAG...AGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR TCA 90 bp | CTCAGGCTCTCCTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGCTCCTCCCGGCCAGGTaGCAGGCAGTTCTCCGATCC | + |
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Preference number: 4 (lower is better) Translates to: LRLSSVPSSTQSLYSKAQLLPAR*QAVLRS Trigger: GGATCGGAGAACTGCCTGTCACCTGGCCGGGAGGAG...CTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAGGAGAGCCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | TCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCACTCCCCCAGGGGGCTaGTGGGTTCCATGCCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: SVPSSTQSLYSKAQDSLPTPPGG*WVPCLG Trigger: CCCTAGGCATGGAACCCAGCAGCCCCCTGGGGGAGT...GGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | TCCTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTACTCCCCCAGGGGGCTaGTGGGTTCCATGCCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLVRTAAPVQVTRTGSRSTPPGG*WVPCLG Trigger: CCCTAGGCATGGAACCCAGCAGCCCCCTGGGGGAGT...AGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | TTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCCTCCCGCAGCCACTTTaGGACTCCACCGCTGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LVRTAAPVQVTRTGSRSILPQPL*DSTAAA Trigger: GGCGGCAGCGGTGGAGTCGCAAAGTGGCTGCGGGAG...GATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | TCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCCCTCTCGTCATCCTCTaGCAGGCGCGACTCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SVPSSTQSLYSKAQDSLPPLVIL*QARLPG Trigger: CCCAGGGAGTCGCGCCTGCCAGAGGATGACGAGAGG...GGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGA 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR TCA 90 bp | ACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCTTTCAGGGACGCTGCTaGAGGGTGGGCTGTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TAAPVQVTRTGSRSIIVPFQGRC*RVGCSG Trigger: GCCAGAACAGCCCACCCTTCAGCAGCGTCCCTGAAA...GGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR CCA 90 bp | AGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCTCTCGTCATCCTCTaGCAGGCGCGACTCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RTAAPVQVTRTGSRSIIVPLVIL*QARLPG Trigger: CCCAGGGAGTCGCGCCTGCCAGAGGATGACGAGAGG...CACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | ACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCGGGGCTTGGCTGACTTaGGGTTCCCAGCAGATAGCC | + |
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Preference number: 4 (lower is better) Translates to: TAAPVQVTRTGSRSIIVPGAWLT*GSQQIA Trigger: GGCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCC...GGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | ACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCCGGCTGATGGCCCCGTaGTACCAGACCTGGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: TAAPVQVTRTGSRSIIVPRLMAP*YQTWFS Trigger: GGAAAACCAGGTCTGGTACCACGGGGCCATCAGCCG...GGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR CCA 90 bp | GTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATACCAACCTGTCGCTGCTaGCAGGGGGTCCGGAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: VRTAAPVQVTRTGSRSIIPTCRC*QGVRSP Trigger: CGGACTCCGGACCCCCTGCCAGCAGCGACAGGTTGG...TATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR TCA 90 bp | GTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGGGCTCAGGGAGGGGTaGAGCTGGACCGGAGATGTC | + |
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Preference number: 4 (lower is better) Translates to: VRTAAPVQVTRTGSRSIIGLREG*SWTGDV Trigger: GACATCTCCGGTCCAGCTTCACCCCTCCCTGAGCCC...TATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139819.8 |
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| CDS-3UTR GCA 90 bp | AAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTACTCCCCCAGGGGGCTaGTGGGTTCCATGCCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: KNRCPRAGDKDWVQVYHSTPPGG*WVPCLG Trigger: CCCTAGGCATGGAACCCAGCAGCCCCCTGGGGGAGT...ACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | CATGTCCTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGTCCCAGCAGATAGCCTaGGAGGTAGCCGCCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HVLGKNRCPRAGDKDWVQSQQIA*EVAAPS Trigger: AGAAGGGGCGGCTACCTCCCAGGCTATCTGCTGGGA...CTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGACATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | CAGGCTCTCCTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATCCCAGCAGATAGCCTaGGAGGTAGCCGCCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QALLGAQLHTVPLFQGPGSQQIA*EVAAPS Trigger: AGAAGGGGCGGCTACCTCCCAGGCTATCTGCTGGGA...TCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAGGAGAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | TCCTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTGGGGCTTGGCTGACTTaGGGTTCCCAGCAGATAGCC | + |
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Preference number: 4 (lower is better) Translates to: SLVRTAAPVQVTRTGSRSGAWLT*GSQQIA Trigger: GGCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCC...AGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | TCCTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTCGGCTGATGGCCCCGTaGTACCAGACCTGGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLVRTAAPVQVTRTGSRSRLMAP*YQTWFS Trigger: GGAAAACCAGGTCTGGTACCACGGGGCCATCAGCCG...AGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR CCA 90 bp | TCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCCGGCTGATGGCCCCGTaGTACCAGACCTGGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVPSSTQSLYSKAQDSLPRLMAP*YQTWFS Trigger: GGAAAACCAGGTCTGGTACCACGGGGCCATCAGCCG...GGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGCTCTCCTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGCCTCTTTGCACAGCCTaGGCAGGTTCTCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLSSVPSSTQSLYSKAQPLCTA*AGSRHL Trigger: CAGATGCCGAGAACCTGCTCAGGCTGTGCAAAGAGG...CTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAGGAGAGCCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTCTCCTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTTTCAGGGACGCTGCTaGAGGGTGGGCTGTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSSVPSSTQSLYSKAQDFQGRC*RVGCSG Trigger: GCCAGAACAGCCCACCCTTCAGCAGCGTCCCTGAAA...ATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAGGAGAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR GCA 90 bp | AGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGGGCTGCTGGGTTCCATaGCTAGGGGCTTGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RTAAPVQVTRTGSRSIIVGCWVP*LGAWLT Trigger: AGTCAGCCAAGCCCCTAGGCATGGAACCCAGCAGCC...CACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTCCGGCTGCTGGGTTCCATaGCTAGGGGCTTGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPSSTQSLYSKAQDSGCWVP*LGAWLT Trigger: AGTCAGCCAAGCCCCTAGGCATGGAACCCAGCAGCC...GGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGGAAGCCAGGTTTCTGACATCATGTCCTTGGTAAGAACCGCTGCCCCCACTCCCCCAGGGGGCTaGTGGGTTCCATGCCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRGSQVSDIMSLVRTAAPTPPGG*WVPCLG Trigger: CCCTAGGCATGGAACCCAGCAGCCCCCTGGGGGAGT...GGGGGCAGCGGTTCTTACCAAGGACATGATGTCAGAAACCTGGCTTCCCCTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGGGAAGCCAGGTTTCTGACATCATGTCCTTGGTAAGAACCGCTGCCCCCCCTCTCGTCATCCTCTaGCAGGCGCGACTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRGSQVSDIMSLVRTAAPPLVIL*QARLPG Trigger: CCCAGGGAGTCGCGCCTGCCAGAGGATGACGAGAGG...GGGGGCAGCGGTTCTTACCAAGGACATGATGTCAGAAACCTGGCTTCCCCTTGT 60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCATGTCCCCTCTCGTCATCCTCTaGCAGGCGCGACTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRLLDPRTRGSQVSDIMSPLVIL*QARLPG Trigger: CCCAGGGAGTCGCGCCTGCCAGAGGATGACGAGAGG...GGACATGATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | AGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGTCCCAGCAGATAGCCTaGGAGGTAGCCGCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTAAPVQVTRTGSRSIIVSQQIA*EVAAPS Trigger: AGAAGGGGCGGCTACCTCCCAGGCTATCTGCTGGGA...CACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATGGGGCTTGGCTGACTTaGGGTTCCCAGCAGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGKNRCPRAGDKDWVQVYGAWLT*GSQQIA Trigger: GGCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCC...ATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | CCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCTGGTCTCAGGGGCTTGGCTGACTTaGGGTTCCCAGCAGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRAGDKDWVQVYHSALVSGAWLT*GSQQIA Trigger: GGCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCC...TGAGACCAGGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTCGGCTGATGGCCCCGTaGTACCAGACCTGGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAQLHTVPLFQGPGFPPLRLMAP*YQTWFS Trigger: GGAAAACCAGGTCTGGTACCACGGGGCCATCAGCCG...AAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR CCA 90 bp | CATGTCCTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGCCCCGTGGTACCAGCTaGTTTTCCAGAGGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HVLGKNRCPRAGDKDWVQPRGTS*FSRGSA Trigger: AGCACTGCCTCTGGAAAACCAGCTGGTACCACGGGG...CTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGACATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTCTCCTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATCGGCTGATGGCCCCGTaGTACCAGCTGGTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSSVPSSTQSLYSKAQDRLMAP*YQLVFQ Trigger: CTGGAAAACCAGCTGGTACCACGGGGCCATCAGCCG...ATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAGGAGAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151130.8 |
||
| CDS-3UTR TCA 90 bp | GACTGGGTCCAGGTCTATCATAGTGCCCTGGTCTCACATCTACAGAGTCCGGATCTCCTCCCGGCCAGGTaGCAGGCAGTTCTCCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: DWVQVYHSALVSHLQSPDLLPAR*QAVLRS Trigger: GGATCGGAGAACTGCCTGTCACCTGGCCGGGAGGAG...ATCCGGACTCTGTAGATGTGAGACCAGGGCACTATGATAGACCTGGACCCAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
||
| CDS-3UTR TCA 90 bp | ACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCATGTGCATGAAGCCCTaGCTGCTCACCTGGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TAAPVQVTRTGSRSIIVPMCMKP*LLTWFS Trigger: GGAAAACCAGGTGAGCAGTCAGGGCTTCATGCACAT...GGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110532.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCTGGACAGCTTCATGTGCATaGAGCCCTGACTGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AAPVQVTRTGSRSIIVPWTASCA*SPDCSP Trigger: AGGTGAGCAGTCAGGGCTTCATGCACATGAAGCTGT...CCAGGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110532.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCTGGGGCCCCCTCATCTTCTaGCTCATAGGGTGTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: AAPVQVTRTGSRSIIVPWGPLIF*LIGCVI Trigger: TATGACACACCCTATGAGCCAGAAGATGAGGGGGCC...CCAGGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCTGGTCTCACATCTACCTCTCGTCATCCTCTaGCAGGCGCGACTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGDKDWVQVYHSALVSHLPLVIL*QARLPG Trigger: CCCAGGGAGTCGCGCCTGCCAGAGGATGACGAGAGG...TAGATGTGAGACCAGGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | AGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGTTCCAGAGGCAGTGCTaGATCTGTCCACTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTAAPVQVTRTGSRSIIVFQRQC*ICPLPQ Trigger: CTGGGGGAGTGGACAGATCCAGCACTGCCTCTGGAA...CACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCTTCCAGAGGCAGTGCTaGATCTGTCCACTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVRTAAPVQVTRTGSRSIFQRQC*ICPLPQ Trigger: CTGGGGGAGTGGACAGATCCAGCACTGCCTCTGGAA...GATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGAAGCCAGGTTTCTGACATCATGTCCTTGGTAAGAACCGCTGCCCCCGTGCGGCTGATGGCCCCGTaGTACCAGACCTGGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGSQVSDIMSLVRTAAPVRLMAP*YQTWFS Trigger: GGAAAACCAGGTCTGGTACCACGGGGCCATCAGCCG...CACGGGGGCAGCGGTTCTTACCAAGGACATGATGTCAGAAACCTGGCTTCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR CCA 90 bp | CTACAGAGTCCGGATGGCCACAGGGTAGAGCAGGGACATGTGTTCCGCTCCCTTCCCCGTGGTACCAGCTaGTTTTCCAGAGGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQSPDGHRVEQGHVFRSLPRGTS*FSRGSA Trigger: AGCACTGCCTCTGGAAAACCAGCTGGTACCACGGGG...AAGGGAGCGGAACACATGTCCCTGCTCTACCCTGTGGCCATCCGGACTCTGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTCCTCTTTGCACAGCCTaGGCAGGTTCTCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNRCPRAGDKDWVQVYHSPLCTA*AGSRHL Trigger: CAGATGCCGAGAACCTGCTCAGGCTGTGCAAAGAGG...ACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR TCA 90 bp | CATGTCCTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGAGCCCTGACTGCTCTTaGGGGAGAGAGAGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HVLGKNRCPRAGDKDWVQSPDCS*GRERSH Trigger: ATGACTTCTCTCTCTCCCTCAAGAGCAGTCAGGGCT...CTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGACATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCTCTCCTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGAATGTGCATGAAGCCCTaGCTGCTCTTGAGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QALLGAQLHTVPLFQGPGMCMKP*LLLRER Trigger: TCTCTCCCTCAAGAGCAGTCAGGGCTTCATGCACAT...TCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAGGAGAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATGTTTTCCAGAGGCAGTaGTGGATCTGTCCACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGKNRCPRAGDKDWVQVYVFQRQ*WICPLP Trigger: GGGGAGTGGACAGATCCAGCACTGCCTCTGGAAAAC...ATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR GCA 90 bp | AGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGGTTTTCCAGAGGCAGTaGTGGATCTGTCCACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTAAPVQVTRTGSRSIIVVFQRQ*WICPLP Trigger: GGGGAGTGGACAGATCCAGCACTGCCTCTGGAAAAC...CACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | CATGTCCTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGGCCCCCTCATCTTCTaGCTCATAGGGTGTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: HVLGKNRCPRAGDKDWVQGPLIF*LIGCVI Trigger: TATGACACACCCTATGAGCCAGAAGATGAGGGGGCC...CTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGACATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATATTCCAGAGGCAGTGCTaGATCTGTCCACTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRTAAPVQVTRTGSRSIIFQRQC*ICPLPQ Trigger: CTGGGGGAGTGGACAGATCCAGCACTGCCTCTGGAA...TATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCCCGTGGTACCAGACCTaGTTTTCCAGAGGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVRTAAPVQVTRTGSRSIPWYQT*FSRGSA Trigger: AGCACTGCCTCTGGAAAACCAGGTCTGGTACCACGG...GATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTGGGCAGCTTGCGGCTaGCATAGTGGTGCACGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GAQLHTVPLFQGPGFPPLWAACG*HSGARF Trigger: AAATCGTGCACCACTATGCCAGCCGCAAGCTGCCCA...AAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR TCA 90 bp | GGGTGGGCTGTTCTGGCCCAACACATACTTGTGTTCCTTAGTCCGGGACAGCTTCCTCTTTGCACAGCCTaGGCAGGTTCTCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GWAVLAQHILVFLSPGQLPLCTA*AGSRHL Trigger: CAGATGCCGAGAACCTGCTCAGGCTGTGCAAAGAGG...AAGCTGTCCCGGACTAAGGAACACAAGTATGTGTTGGGCCAGAACAGCCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCAGCCCTGACTGCTCTTaGGGGAGAGAGAGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVRTAAPVQVTRTGSRSISPDCS*GRERSH Trigger: ATGACTTCTCTCTCTCCCTCAAGAGCAGTCAGGGCT...GATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATGTGCATGAAGCCCTaGCTGCTCTTGAGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVRTAAPVQVTRTGSRSIMCMKP*LLLRER Trigger: TCTCTCCCTCAAGAGCAGTCAGGGCTTCATGCACAT...GATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR TCA 90 bp | GGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTATGTGCATGAAGCCCTaGCTGCTCTTGAGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GAQLHTVPLFQGPGFPPLMCMKP*LLLRER Trigger: TCTCTCCCTCAAGAGCAGTCAGGGCTTCATGCACAT...AAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR TCA 90 bp | AGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGATGTGCATGAAGCCCTaGCTGCTCTTGAGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTAAPVQVTRTGSRSIIVMCMKP*LLLRER Trigger: TCTCTCCCTCAAGAGCAGTCAGGGCTTCATGCACAT...CACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR TCA 90 bp | AGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACTTTCAGGGACGCTGCTaGAGGGTGGGCTGTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RNLQRLLDPRTRGSQVSDFQGRC*RVGCSG Trigger: GCCAGAACAGCCCACCCTTCAGCAGCGTCCCTGAAA...GTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTCAGCGCCTGGGGTCTCGACCCGAATaGGGCGGTGCGGGGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGPGFPPLYNKLRNLQRLGSRPE*GGAGVS Trigger: GCTCACCCCCGCACCGCCTCATTCGGGTCGAGACCC...CAGGCGCTGAAGATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGGGAAGCCAGGTTTCTGACATCATGTCCTTGGTAAGAACCGCTGCCCCCTTCCAGAGGCAGTGCTaGATCTGTCCACTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRGSQVSDIMSLVRTAAPFQRQC*ICPLPQ Trigger: CTGGGGGAGTGGACAGATCCAGCACTGCCTCTGGAA...GGGGGCAGCGGTTCTTACCAAGGACATGATGTCAGAAACCTGGCTTCCCCTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | TATCATAGTGCCCTGGTCTCACATCTACAGAGTCCGGATGGCCACAGGGTAGAGCGGCTGATGGCCCCGTaGTACCAGCTGGTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YHSALVSHLQSPDGHRVERLMAP*YQLVFQ Trigger: CTGGAAAACCAGCTGGTACCACGGGGCCATCAGCCG...CTCTACCCTGTGGCCATCCGGACTCTGTAGATGTGAGACCAGGGCACTATGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
||
| 3UTR CAA 72 bp | AGGACAAGGGGAAGCCAGGTTTCTGACATCATGTCCTaGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTRGSQVSDIMS*VRTAAPVQVTR Trigger: CCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGACATGATGTCAGAAACCTGGCTTCCCCTTGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR TCA 90 bp | AGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACCCTCTTTGCACAGCCTaGGCAGGTTCTCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNLQRLLDPRTRGSQVSDPLCTA*AGSRHL Trigger: CAGATGCCGAGAACCTGCTCAGGCTGTGCAAAGAGG...GTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTAGCCCTGACTGCTCTTaGGGGAGAGAGAGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KNRCPRAGDKDWVQVYHSSPDCS*GRERSH Trigger: ATGACTTCTCTCTCTCCCTCAAGAGCAGTCAGGGCT...ACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTATGTGCATGAAGCCCTaGCTGCTCTTGAGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNRCPRAGDKDWVQVYHSMCMKP*LLLRER Trigger: TCTCTCCCTCAAGAGCAGTCAGGGCTTCATGCACAT...ACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR TCA 90 bp | AATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCTTTCAGGGACGCTGCTaGAGGGTGGGCTGTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLQRLLDPRTRGSQVSDIFQGRC*RVGCSG Trigger: GCCAGAACAGCCCACCCTTCAGCAGCGTCCCTGAAA...GATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR GCA 90 bp | AATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCGGCTGCTGGGTTCCATaGCTAGGGGCTTGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: NLQRLLDPRTRGSQVSDIGCWVP*LGAWLT Trigger: AGTCAGCCAAGCCCCTAGGCATGGAACCCAGCAGCC...GATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGGAAGCCAGGTTTCTGACATCATGTCCTTGGTAAGAACCGCTGCCCCCGTTTTCCAGAGGCAGTaGTGGATCTGTCCACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TRGSQVSDIMSLVRTAAPVFQRQ*WICPLP Trigger: GGGGAGTGGACAGATCCAGCACTGCCTCTGGAAAAC...GGGGGCAGCGGTTCTTACCAAGGACATGATGTCAGAAACCTGGCTTCCCCTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | AAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTCTGGTCATACTCTTCTaGAGGCCTCTCGTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KNRCPRAGDKDWVQVYHSLVILF*RPLVIL Trigger: GAGGATGACGAGAGGCCTCCAGAAGAGTATGACCAG...ACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATACTGGTCATACTCTTCTaGAGGCCTCTCGTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRTAAPVQVTRTGSRSIILVILF*RPLVIL Trigger: GAGGATGACGAGAGGCCTCCAGAAGAGTATGACCAG...TATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATGGGCAGCAAAGGCTTTaGAAATCCGTTCCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGKNRCPRAGDKDWVQVYGQQRL*KSVPSS Trigger: GGAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCC...ATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTCCGGGCAGCAAAGGCTTTaGAAATCCGTTCCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPSSTQSLYSKAQDSGQQRL*KSVPSS Trigger: GGAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCC...GGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTTCTGGCCCAACACATACTTGTGTTCCTTAGTCCGGGACAGCTTCATGTGTCCCAGCAGATAGCCTaGGAGGTAGCCGCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVLAQHILVFLSPGQLHVSQQIA*EVAAPS Trigger: AGAAGGGGCGGCTACCTCCCAGGCTATCTGCTGGGA...CACATGAAGCTGTCCCGGACTAAGGAACACAAGTATGTGTTGGGCCAGAACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | GCCCAACACATACTTGTGTTCCTTAGTCCGGGACAGCTTCATGTGCATGAAGCCGGGGCTTGGCTGACTTaGGGTTCCCAGCAGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQHILVFLSPGQLHVHEAGAWLT*GSQQIA Trigger: GGCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCC...GGCTTCATGCACATGAAGCTGTCCCGGACTAAGGAACACAAGTATGTGTTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | ACAAGGGGAAGCCAGGTTTCTGACATCATGTCCTTGGTAAGAACCGCTGCCCCCCCGTGGTACCAGACCTaGTTTTCCAGAGGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRGSQVSDIMSLVRTAAPPWYQT*FSRGSA Trigger: AGCACTGCCTCTGGAAAACCAGGTCTGGTACCACGG...GGGGGCAGCGGTTCTTACCAAGGACATGATGTCAGAAACCTGGCTTCCCCTTGT 56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGGGGAAGCCAGGTTTCTGACATCATGTCCTTGGTAAGAACCGCTGCCCCCAGCCCTGACTGCTCTTaGGGGAGAGAGAGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TRGSQVSDIMSLVRTAAPSPDCS*GRERSH Trigger: ATGACTTCTCTCTCTCCCTCAAGAGCAGTCAGGGCT...GGGGGCAGCGGTTCTTACCAAGGACATGATGTCAGAAACCTGGCTTCCCCTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR TCA 90 bp | TATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCGGGTCTCGACCCGAATaGGGCGGTGCGGGGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YNKLRNLQRLLDPRTRGSGSRPE*GGAGVS Trigger: GCTCACCCCCGCACCGCCTCATTCGGGTCGAGACCC...GCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | TTCTGGCCCAACACATACTTGTGTTCCTTAGTCCGGGACAGCTTCATGTGCATGGGCTGCTGGGTTCCATaGCTAGGGGCTTGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: FWPNTYLCSLVRDSFMCMGCWVP*LGAWLT Trigger: AGTCAGCCAAGCCCCTAGGCATGGAACCCAGCAGCC...CATGCACATGAAGCTGTCCCGGACTAAGGAACACAAGTATGTGTTGGGCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | GGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTCAGCGCCTGCTAACTCCCCCAGGGGGCTaGTGGGTTCCATGCCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPGFPPLYNKLRNLQRLLTPPGG*WVPCLG Trigger: CCCTAGGCATGGAACCCAGCAGCCCCCTGGGGGAGT...TAGCAGGCGCTGAAGATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | AGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACGTTTTCCAGAGGCAGTaGTGGATCTGTCCACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RNLQRLLDPRTRGSQVSDVFQRQ*WICPLP Trigger: GGGGAGTGGACAGATCCAGCACTGCCTCTGGAAAAC...GTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | TCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCGAGAGAAGTCATTTTTaGTGGTCTCACTGTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVPSSTQSLYSKAQDSLPERSHF*WSHCCA Trigger: TGCGCAACAGTGAGACCAGCAAAAATGACTTCTCTC...GGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR CCA 90 bp | AAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGGGCAGCAAAGGCTTTaGAAATCCGTTCCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNRCPRAGDKDWVQVYHSGQQRL*KSVPSS Trigger: GGAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCC...ACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | TTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTTCCCAGCAGATAGCCTaGGAGGTAGCCGCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLQRLLDPRTRGSQVSSQQIA*EVAAPS Trigger: AGAAGGGGCGGCTACCTCCCAGGCTATCTGCTGGGA...AGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGGCCCAACACATACTTGTGTTCCTTAGTCCGGGACAGCTTCATGTGCATGGGGGCTTGGCTGACTTaGGGTTCCCAGCAGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FWPNTYLCSLVRDSFMCMGAWLT*GSQQIA Trigger: GGCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCC...CATGCACATGAAGCTGTCCCGGACTAAGGAACACAAGTATGTGTTGGGCCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCTCTCCTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGAAGAAGTCATTTTTGCTaGTCTCACTGTTGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QALLGAQLHTVPLFQGPGRSHFC*SHCCAP Trigger: TGGTGCGCAACAGTGAGACCAGCAAAAATGACTTCT...TCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAGGAGAGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCTCTCCTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGAGAAGTCATTTTTGCTaGTCTCACTGTTGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLSSVPSSTQSLYSKAQRSHFC*SHCCAP Trigger: TGGTGCGCAACAGTGAGACCAGCAAAAATGACTTCT...CTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAGGAGAGCCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR TCA 90 bp | CAACACATACTTGTGTTCCTTAGTCCGGGACAGCTTCATGTGCATGAAGCCCTGCCTCTTTGCACAGCCTaGGCAGGTTCTCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QHILVFLSPGQLHVHEALPLCTA*AGSRHL Trigger: CAGATGCCGAGAACCTGCTCAGGCTGTGCAAAGAGG...CAGGGCTTCATGCACATGAAGCTGTCCCGGACTAAGGAACACAAGTATGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
||
| CDS-3UTR GCA 90 bp | AAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTGGCTGCTGGGTTCCATaGCTAGGGGCTTGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KLRNLQRLLDPRTRGSQVGCWVP*LGAWLT Trigger: AGTCAGCCAAGCCCCTAGGCATGGAACCCAGCAGCC...AACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR GCA 90 bp | AATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCGTTTTCCAGAGGCAGTaGTGGATCTGTCCACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NLQRLLDPRTRGSQVSDIVFQRQ*WICPLP Trigger: GGGGAGTGGACAGATCCAGCACTGCCTCTGGAAAAC...GATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTCTCCTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATGAGAGAAGTCATTTTTaGTGGTCTCACTGTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSSVPSSTQSLYSKAQDERSHF*WSHCCA Trigger: TGCGCAACAGTGAGACCAGCAAAAATGACTTCTCTC...ATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAGGAGAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR CCA 90 bp | AGGACAAGGGGAAGCCAGGTTTCTGACATCATGTCCTTGGTAAGAACCGCTGCCCTGGTCATACTCTTCTaGAGGCCTCTCGTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTRGSQVSDIMSLVRTAALVILF*RPLVIL Trigger: GAGGATGACGAGAGGCCTCCAGAAGAGTATGACCAG...GGCAGCGGTTCTTACCAAGGACATGATGTCAGAAACCTGGCTTCCCCTTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | AATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCCCGTGGTACCAGACCTaGTTTTCCAGAGGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLQRLLDPRTRGSQVSDIPWYQT*FSRGSA Trigger: AGCACTGCCTCTGGAAAACCAGGTCTGGTACCACGG...GATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR CCA 90 bp | AATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCTGGGCAGCTTGCGGCTaGCATAGTGGTGCACGATTT | + |
|
Preference number: 4 (lower is better) Translates to: NLQRLLDPRTRGSQVSDIWAACG*HSGARF Trigger: AAATCGTGCACCACTATGCCAGCCGCAAGCTGCCCA...GATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR CCA 90 bp | TATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCCAACCTGTCGCTGCTaGCAGGGGGTCCGGAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YNKLRNLQRLLDPRTRGSPTCRC*QGVRSP Trigger: CGGACTCCGGACCCCCTGCCAGCAGCGACAGGTTGG...GCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
||
| CDS-3UTR TCA 90 bp | GGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTCTCCTCCCGGCCAGGTaGCAGGCAGTTCTCCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GFPPLYNKLRNLQRLLDPLLPAR*QAVLRS Trigger: GGATCGGAGAACTGCCTGTCACCTGGCCGGGAGGAG...AGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATAAAGGGGAGGGAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTCAGCGCCTGCTATTTCAGGGACGCTGCTaGAGGGTGGGCTGTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPGFPPLYNKLRNLQRLLFQGRC*RVGCSG Trigger: GCCAGAACAGCCCACCCTTCAGCAGCGTCCCTGAAA...TAGCAGGCGCTGAAGATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR TCA 90 bp | TTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTCAGGGGTCTCGACCCGAATaGGGCGGTGCGGGGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFQGPGFPPLYNKLRNLQGSRPE*GGAGVS Trigger: GCTCACCCCCGCACCGCCTCATTCGGGTCGAGACCC...CTGAAGATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | GTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTCCCGCAGCCACTTTaGGACTCCACCGCTGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPLFQGPGFPPLYNKLRNLPQPL*DSTAAA Trigger: GGCGGCAGCGGTGGAGTCGCAAAGTGGCTGCGGGAG...ATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | AATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCGGCCCCCTCATCTTCTaGCTCATAGGGTGTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: NLQRLLDPRTRGSQVSDIGPLIF*LIGCVI Trigger: TATGACACACCCTATGAGCCAGAAGATGAGGGGGCC...GATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGCCTCTCGTCATCCTCTaGCAGGCGCGACTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVPLFQGPGFPPLYNKLRPLVIL*QARLPG Trigger: CCCAGGGAGTCGCGCCTGCCAGAGGATGACGAGAGG...CCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTCCGTGGTACCAGACCTaGTTTTCCAGAGGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLQRLLDPRTRGSQVSPWYQT*FSRGSA Trigger: AGCACTGCCTCTGGAAAACCAGGTCTGGTACCACGG...AGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATACTCCCCCAGGGGGCTaGTGGGTTCCATGCCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPLFQGPGFPPLYNKLRNTPPGG*WVPCLG Trigger: CCCTAGGCATGGAACCCAGCAGCCCCCTGGGGGAGT...ATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGGAAGCCAGGTTTCTGACATCATGTCCTTGGTAAGAACCGCTGCCCCCGAGAGAAGTCATTTTTaGTGGTCTCACTGTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TRGSQVSDIMSLVRTAAPERSHF*WSHCCA Trigger: TGCGCAACAGTGAGACCAGCAAAAATGACTTCTCTC...GGGGGCAGCGGTTCTTACCAAGGACATGATGTCAGAAACCTGGCTTCCCCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCCTCTCGTCATCCTCTaGCAGGCGCGACTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPLFQGPGFPPLYNKLRNPLVIL*QARLPG Trigger: CCCAGGGAGTCGCGCCTGCCAGAGGATGACGAGAGG...ATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | AATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCGGGCAGCAAAGGCTTTaGAAATCCGTTCCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLQRLLDPRTRGSQVSDIGQQRL*KSVPSS Trigger: GGAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCC...GATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | GGGCTGTTCTGGCCCAACACATACTTGTGTTCCTTAGTCCGGGACAGCTTCATGTCCGATCCTTCAAACTaGGCAGCAAAGGCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLFWPNTYLCSLVRDSFMSDPSN*AAKALE Trigger: TTCCAAAGCCTTTGCTGCCCAGTTTGAAGGATCGGA...CATGAAGCTGTCCCGGACTAAGGAACACAAGTATGTGTTGGGCCAGAACAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCTGGTCTCACATCTATCCGATCCTTCAAACTaGGCAGCAAAGGCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGDKDWVQVYHSALVSHLSDPSN*AAKALE Trigger: TTCCAAAGCCTTTGCTGCCCAGTTTGAAGGATCGGA...TAGATGTGAGACCAGGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | AATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGTTCCAGAGGCAGTGCTaGATCTGTCCACTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKLRNLQRLLDPRTRGSQFQRQC*ICPLPQ Trigger: CTGGGGGAGTGGACAGATCCAGCACTGCCTCTGGAA...CTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | AAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTCCGTGGTACCAGACCTaGTTTTCCAGAGGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLRNLQRLLDPRTRGSQVPWYQT*FSRGSA Trigger: AGCACTGCCTCTGGAAAACCAGGTCTGGTACCACGG...AACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTCAGCGCCTGCTAGTTTTCCAGAGGCAGTaGTGGATCTGTCCACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGFPPLYNKLRNLQRLLVFQRQ*WICPLP Trigger: GGGGAGTGGACAGATCCAGCACTGCCTCTGGAAAAC...TAGCAGGCGCTGAAGATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | AAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTGGCCCCCTCATCTTCTaGCTCATAGGGTGTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: KLRNLQRLLDPRTRGSQVGPLIF*LIGCVI Trigger: TATGACACACCCTATGAGCCAGAAGATGAGGGGGCC...AACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | AAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTCTGGTCATACTCTTCTaGAGGCCTCTCGTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLRNLQRLLDPRTRGSQVLVILF*RPLVIL Trigger: GAGGATGACGAGAGGCCTCCAGAAGAGTATGACCAG...AACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | TTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGGGCAGCAAAGGCTTTaGAAATCCGTTCCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLQRLLDPRTRGSQVSGQQRL*KSVPSS Trigger: GGAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCC...AGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | TTCTGGCCCAACACATACTTGTGTTCCTTAGTCCGGGACAGCTTCATGTGCATGGGGCAGCAAAGGCTTTaGAAATCCGTTCCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FWPNTYLCSLVRDSFMCMGQQRL*KSVPSS Trigger: GGAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCC...CATGCACATGAAGCTGTCCCGGACTAAGGAACACAAGTATGTGTTGGGCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | AATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCTCCGATCCTTCAAACTaGGCAGCAAAGGCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLQRLLDPRTRGSQVSDISDPSN*AAKALE Trigger: TTCCAAAGCCTTTGCTGCCCAGTTTGAAGGATCGGA...GATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTCCCCTTTATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGTCCCAGCAGATAGCCTaGGAGGTAGCCGCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPPLYNKLRNLQRLLDPRSQQIA*EVAAPS Trigger: AGAAGGGGCGGCTACCTCCCAGGCTATCTGCTGGGA...CCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATAAAGGGGAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | AGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACAGAAGTCATTTTTGCTaGTCTCACTGTTGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RNLQRLLDPRTRGSQVSDRSHFC*SHCCAP Trigger: TGGTGCGCAACAGTGAGACCAGCAAAAATGACTTCT...GTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR CCA 90 bp | AATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGTGGGCAGCTTGCGGCTaGCATAGTGGTGCACGATTT | + |
|
Preference number: 4 (lower is better) Translates to: NKLRNLQRLLDPRTRGSQWAACG*HSGARF Trigger: AAATCGTGCACCACTATGCCAGCCGCAAGCTGCCCA...CTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR TCA 90 bp | TTCCCTCCCCTTTATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGCCTCTTTGCACAGCCTaGGCAGGTTCTCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPPLYNKLRNLQRLLDPRPLCTA*AGSRHL Trigger: CAGATGCCGAGAACCTGCTCAGGCTGTGCAAAGAGG...CCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATAAAGGGGAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | AATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCGAGAGAAGTCATTTTTaGTGGTCTCACTGTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLQRLLDPRTRGSQVSDIERSHF*WSHCCA Trigger: TGCGCAACAGTGAGACCAGCAAAAATGACTTCTCTC...GATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR CCA 90 bp | GTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATTCCCAGCAGATAGCCTaGGAGGTAGCCGCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPLFQGPGFPPLYNKLRNSQQIA*EVAAPS Trigger: AGAAGGGGCGGCTACCTCCCAGGCTATCTGCTGGGA...ATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | GTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATGGGGCTTGGCTGACTTaGGGTTCCCAGCAGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPLFQGPGFPPLYNKLRNGAWLT*GSQQIA Trigger: GGCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCC...ATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | GGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTTTCCAGAGGCAGTGCTaGATCTGTCCACTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFPPLYNKLRNLQRLLDPFQRQC*ICPLPQ Trigger: CTGGGGGAGTGGACAGATCCAGCACTGCCTCTGGAA...AGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATAAAGGGGAGGGAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | ACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGGTTTTCCAGAGGCAGTaGTGGATCTGTCCACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVPLFQGPGFPPLYNKLRVFQRQ*WICPLP Trigger: GGGGAGTGGACAGATCCAGCACTGCCTCTGGAAAAC...CCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR GCA 90 bp | CCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTCTTCAAACTGGGCGCTaGTGTCCTCCAGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLFQGPGFPPLYNKLRNLLQTGR*CPPGWA Trigger: AGCCCAGCCTGGAGGACAGCAGCGCCCAGTTTGAAG...AAGATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139819.8 |
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| CDS-3UTR CCA 90 bp | CCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTTCCCAGCAGATAGCCTaGGAGGTAGCCGCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLFQGPGFPPLYNKLRNLSQQIA*EVAAPS Trigger: AGAAGGGGCGGCTACCTCCCAGGCTATCTGCTGGGA...AAGATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTAGAAGTCATTTTTGCTaGTCTCACTGTTGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNLQRLLDPRTRGSQVSRSHFC*SHCCAP Trigger: TGGTGCGCAACAGTGAGACCAGCAAAAATGACTTCT...AGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGTGGGCAGCTTGCGGCTaGCATAGTGGTGCACGATTT | + |
|
Preference number: 4 (lower is better) Translates to: TVPLFQGPGFPPLYNKLRWAACG*HSGARF Trigger: AAATCGTGCACCACTATGCCAGCCGCAAGCTGCCCA...CCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTCCTCTTTGCACAGCCTaGGCAGGTTCTCGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLFQGPGFPPLYNKLRNLPLCTA*AGSRHL Trigger: CAGATGCCGAGAACCTGCTCAGGCTGTGCAAAGAGG...AAGATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR TCA 90 bp | TATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCAGCCCTGACTGCTCTTaGGGGAGAGAGAGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YNKLRNLQRLLDPRTRGSSPDCS*GRERSH Trigger: ATGACTTCTCTCTCTCCCTCAAGAGCAGTCAGGGCT...GCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR CCA 90 bp | TATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCTGGTCATACTCTTCTaGAGGCCTCTCGTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YNKLRNLQRLLDPRTRGSLVILF*RPLVIL Trigger: GAGGATGACGAGAGGCCTCCAGAAGAGTATGACCAG...GCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATTGGGCAGCTTGCGGCTaGCATAGTGGTGCACGATTT | + |
|
Preference number: 4 (lower is better) Translates to: VPLFQGPGFPPLYNKLRNWAACG*HSGARF Trigger: AAATCGTGCACCACTATGCCAGCCGCAAGCTGCCCA...ATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR CCA 90 bp | CCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTTCCGATCCTTCAAACTaGGCGCTGCTGTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLFQGPGFPPLYNKLRNLSDPSN*ALLSSR Trigger: CCTGGAGGACAGCAGCGCCCAGTTTGAAGGATCGGA...AAGATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139819.8 |
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| CDS-3UTR CCA 90 bp | CCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTGGCCCCCTCATCTTCTaGCTCATAGGGTGTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: PLFQGPGFPPLYNKLRNLGPLIF*LIGCVI Trigger: TATGACACACCCTATGAGCCAGAAGATGAGGGGGCC...AAGATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | CCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTCTGGTCATACTCTTCTaGAGGCCTCTCGTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLFQGPGFPPLYNKLRNLLVILF*RPLVIL Trigger: GAGGATGACGAGAGGCCTCCAGAAGAGTATGACCAG...AAGATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTCCCCTTTATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGTCCGATCCTTCAAACTaGGCAGCAAAGGCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FPPLYNKLRNLQRLLDPRSDPSN*AAKALE Trigger: TTCCAAAGCCTTTGCTGCCCAGTTTGAAGGATCGGA...CCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATAAAGGGGAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | TATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCTCCGATCCTTCAAACTaGGCAGCAAAGGCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YNKLRNLQRLLDPRTRGSSDPSN*AAKALE Trigger: TTCCAAAGCCTTTGCTGCCCAGTTTGAAGGATCGGA...GCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | GGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTTCCGATCCTTCAAACTaGGCAGCAAAGGCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GFPPLYNKLRNLQRLLDPSDPSN*AAKALE Trigger: TTCCAAAGCCTTTGCTGCCCAGTTTGAAGGATCGGA...AGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATAAAGGGGAGGGAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CCA 90 bp | TATAATAAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCAGAAGTCATTTTTGCTaGTCTCACTGTTGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: YNKLRNLQRLLDPRTRGSRSHFC*SHCCAP Trigger: TGGTGCGCAACAGTGAGACCAGCAAAAATGACTTCT...GCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTTATTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR CCA 90 bp | CCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGAATCTTTCCGATCCTTCAAACTaGGCAGCAAAGGCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLFQGPGFPPLYNKLRNLSDPSN*AAKALE Trigger: TTCCAAAGCCTTTGCTGCCCAGTTTGAAGGATCGGA...AAGATTCCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS CCA 90 bp | ACTCTTCTGGAGGCCTCTCGTCATCCTCTGGCAGGCGCGACTCCCTaGGCCAGGGAGTCCCCTCACCTTCTGGGCTGGCCCCCTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLLEASRHPLAGATP*ARESPHLLGWPPHL Trigger: AAGATGAGGGGGCCAGCCCAGAAGGTGAGGGGACTCCCTGGCCCAGGGAGTCGCGCCTGCCAGAGGATGACGAGAGGCCTCCAGAAGAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CAA 90 bp | CGTCGGCTCCAGCCTCAATTTATAGTCGGGCTCGCTCCCCGCCCCCTCCCGGCAAGGGGCTTGGCTGACTaGGGGTTCCCAGCAGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRLQPQFIVGLAPRPLPARGLAD*GFPADS Trigger: GCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCCT...TGCCGGGAGGGGGCGGGGAGCGAGCCCGACTATAAATTGAGGCTGGAGCCGACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 |
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| CDS CCA 90 bp | CTCTGGCAGGCGCGACTCCCTGGGCCAGGGAGTCCCCTCACCTTCTaGGCTGGCCCCCTCATCTTCTGGCTCATAGGGTGTGTCATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWQARLPGPGSPLTF*AGPLIFWLIGCVIE Trigger: CTCTATGACACACCCTATGAGCCAGAAGATGAGGGGGCCAGCCCAGAAGGTGAGGGGACTCCCTGGCCCAGGGAGTCGCGCCTGCCAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS CCA 90 bp | GCAGGCGCGACTCCCTGGGCCAGGGAGTCCCCTCACCTTCTGGGCTaGCCCCCTCATCTTCTGGCTCATAGGGTGTGTCATAGAGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AGATPWARESPHLLG*PPHLLAHRVCHREV Trigger: TACCTCTCTATGACACACCCTATGAGCCAGAAGATGAGGGGGCCAGCCCAGAAGGTGAGGGGACTCCCTGGCCCAGGGAGTCGCGCCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | TCCTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTAGGGGCTTGGCTGACTaGGGGTTCCCAGCAGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLVRTAAPVQVTRTGSRSRGLAD*GFPADS Trigger: GCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCCT...AGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | GGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTAGGGGCTTGGCTGACTaGGGGTTCCCAGCAGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: GAQLHTVPLFQGPGFPPLRGLAD*GFPADS Trigger: GCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCCT...AAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | AGGGGAAGCCAGGTTTCTGACATCATGTCCTTGGTAAGAACCGCTGCCCCCGTGAGGGGCTTGGCTGACTaGGGGTTCCCAGCAGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGSQVSDIMSLVRTAAPVRGLAD*GFPADS Trigger: GCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCCT...CACGGGGGCAGCGGTTCTTACCAAGGACATGATGTCAGAAACCTGGCTTCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | TTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCCTCAGCCATCATCTTTaGGGCCTCGTAGGGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LVRTAAPVQVTRTGSRSILSHHL*GLVGLH Trigger: ATGGAGCCCTACGAGGCCCAAAAGATGATGGCTGAG...GATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | CAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCATGTCCAGGGGCTTGGCTGACTaGGGGTTCCCAGCAGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: QRLLDPRTRGSQVSDIMSRGLAD*GFPADS Trigger: GCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCCT...GGACATGATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | GTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATACTCAGCCATCATCTTTaGGGCCTCGTAGGGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VRTAAPVQVTRTGSRSIILSHHL*GLVGLH Trigger: ATGGAGCCCTACGAGGCCCAAAAGATGATGGCTGAG...TATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | CAGGCTCTCCTCGGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATGGGCAGCAAAGGCTTaGGAAATCCGTTCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QALLGAQLHTVPLFQGPGWAAKA*EIRSFF Trigger: GAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCCA...TCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACCGAGGAGAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | CATGTCCTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGTGGGCAGCAAAGGCTTaGGAAATCCGTTCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HVLGKNRCPRAGDKDWVQWAAKA*EIRSFF Trigger: GAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCCA...CTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGACATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | GCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCTGGAGAGAGAAGTCATTTTaGCTGGTCTCACTGTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AAPVQVTRTGSRSIIVPWREKSF*LVSLLR Trigger: GCGCAACAGTGAGACCAGCAAAAATGACTTCTCTCT...CCAGGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR CAA 90 bp | GGTGCCCAGCTCCACACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTGGGCAGCAAAGGCTTaGGAAATCCGTTCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAQLHTVPLFQGPGFPPLWAAKA*EIRSFF Trigger: GAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCCA...AAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | GCCCAACACATACTTGTGTTCCTTAGTCCGGGACAGCTTCATGTGCATGAAGCCAGGGGCTTGGCTGACTaGGGGTTCCCAGCAGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: AQHILVFLSPGQLHVHEARGLAD*GFPADS Trigger: GCTATCTGCTGGGAACCCCAAGTCAGCCAAGCCCCT...GGCTTCATGCACATGAAGCTGTCCCGGACTAAGGAACACAAGTATGTGTTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | ACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTGCCCTCAACAGCAAAGGCTTaGGAAATCCGTTCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TAAPVQVTRTGSRSIIVPSTAKA*EIRSFF Trigger: GAAGAAGGAACGGATTTCCAAAGCCTTTGCTGTTGA...GGGCACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139819.8 |
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| CDS-3UTR CAA 90 bp | AGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACCTCAGCCATCATCTTTaGGGCCTCGTAGGGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RNLQRLLDPRTRGSQVSDLSHHL*GLVGLH Trigger: ATGGAGCCCTACGAGGCCCAAAAGATGATGGCTGAG...GTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | AAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATAGTTGGGCAGCAAAGGCTTaGGAAATCCGTTCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KNRCPRAGDKDWVQVYHSWAAKA*EIRSFF Trigger: GAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCCA...ACTATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | GTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATCATATGGGCAGCAAAGGCTTaGGAAATCCGTTCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VRTAAPVQVTRTGSRSIIWAAKA*EIRSFF Trigger: GAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCCA...TATGATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | CTTGGTAAGAACCGCTGCCCCCGTGCAGGTGACAAGGACTGGGTCCAGGTCTATAGAGAGAAGTCATTTTaGCTGGTCTCACTGTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LGKNRCPRAGDKDWVQVYREKSF*LVSLLR Trigger: GCGCAACAGTGAGACCAGCAAAAATGACTTCTCTCT...ATAGACCTGGACCCAGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
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| CDS-3UTR CAA 90 bp | AAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTCTCAGCCATCATCTTTaGGGCCTCGTAGGGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KLRNLQRLLDPRTRGSQVLSHHL*GLVGLH Trigger: ATGGAGCCCTACGAGGCCCAAAAGATGATGGCTGAG...AACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | GCCCAACACATACTTGTGTTCCTTAGTCCGGGACAGCTTCATGTGCATGAAGCCTGGGCAGCAAAGGCTTaGGAAATCCGTTCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AQHILVFLSPGQLHVHEAWAAKA*EIRSFF Trigger: GAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCCA...GGCTTCATGCACATGAAGCTGTCCCGGACTAAGGAACACAAGTATGTGTTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121237.2 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | AATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCTGGGCAGCAAAGGCTTaGGAAATCCGTTCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLQRLLDPRTRGSQVSDIWAAKA*EIRSFF Trigger: GAAGAAGGAACGGATTTCCAAAGCCTTTGCTGCCCA...GATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS-3UTR CAA 90 bp | AGGACAAGGGGAAGCCAGGTTTCTGACATCATGTCCTTGGTAAGAACCGCTGCCAGAGAGAAGTCATTTTaGCTGGTCTCACTGTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RTRGSQVSDIMSLVRTAAREKSF*LVSLLR Trigger: GCGCAACAGTGAGACCAGCAAAAATGACTTCTCTCT...GGCAGCGGTTCTTACCAAGGACATGATGTCAGAAACCTGGCTTCCCCTTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR CAA 90 bp | AATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTTCTGACATCAGAGAGAAGTCATTTTaGCTGGTCTCACTGTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: NLQRLLDPRTRGSQVSDIREKSF*LVSLLR Trigger: GCGCAACAGTGAGACCAGCAAAAATGACTTCTCTCT...GATGTCAGAAACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000125826.8 ENSMUST00000139819.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTCCCTTTATTCCAAGGCCCAGGATTCCCTCCCCTTTATAATAAATTAAGGCTCAGCCATCATCTTTaGGGCCTCGTAGGGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TVPLFQGPGFPPLYNKLRLSHHL*GLVGLH Trigger: ATGGAGCCCTACGAGGCCCAAAAGATGATGGCTGAG...CCTTAATTTATTATAAAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048635.13 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
||
| CDS-3UTR CAA 90 bp | AAATTAAGGAATCTTCAGCGCCTGCTAGATCCTAGGACAAGGGGAAGCCAGGTTGGCCAAGGTAGGTCTTaGATGACCTTTATGTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: KLRNLQRLLDPRTRGSQVGQGRS*MTFMST Trigger: TGTTGACATAAAGGTCATCAAAGACCTACCTTGGCC...AACCTGGCTTCCCCTTGTCCTAGGATCTAGCAGGCGCTGAAGATTCCTTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139819.8 |
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| CDS CCA 72 bp | GAGGCCTCTCGTCATCCTCTGGCAGGCGCGACTCCCTaGGCCAGGGAGTCCCCTCACCTTCTGGGCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EASRHPLAGATP*ARESPHLLGWP Trigger: GGGCCAGCCCAGAAGGTGAGGGGACTCCCTGGCCCAGGGAGTCGCGCCTGCCAGAGGATGACGAGAGGCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000143484.2 ENSMUST00000151130.8 |
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| CDS CCA 72 bp | CCGCATAGTCCTCTAGGATTGCCAACCTGTCGCTGCTaGCAGGGGGTCCGGAGTCCGGAGGGGGTGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PHSPLGLPTCRC*QGVRSPEGVLG Trigger: CCCCAGCACCCCCTCCGGACTCCGGACCCCCTGCCAGCAGCGACAGGTTGGCAATCCTAGAGGACTATGCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS GCA 72 bp | GGTCCGCATAGTCCTCTAGGATTGCCAACCTGTCGCTaGTGGCAGGGGGTCCGGAGTCCGGAGGGGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GPHSPLGLPTCR*WQGVRSPEGVL Trigger: CAGCACCCCCTCCGGACTCCGGACCCCCTGCCAGCAGCGACAGGTTGGCAATCCTAGAGGACTATGCGGACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000110532.9 ENSMUST00000125826.8 ENSMUST00000151130.8 |
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| CDS CCA 72 bp | GCGCGACTCCCTGGGCCAGGGAGTCCCCTCACCTTCTaGGCTGGCCCCCTCATCTTCTGGCTCATAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: ARLPGPGSPLTF*AGPLIFWLIGC Trigger: ACACCCTATGAGCCAGAAGATGAGGGGGCCAGCCCAGAAGGTGAGGGGACTCCCTGGCCCAGGGAGTCGCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000048635.13 ENSMUST00000110530.9 ENSMUST00000110531.9 ENSMUST00000110532.9 ENSMUST00000121237.2 ENSMUST00000125826.8 ENSMUST00000139819.8 ENSMUST00000151130.8 |
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| CDS CAA 72 bp | TCCAGCTGTCCCACCGGCGGAGGCCAAGGTAGGTCTTaGATGACCTTTATGTCAACAGCAAAGGCTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SSCPTGGGQGRS*MTFMSTAKALE Trigger: TTCCAAAGCCTTTGCTGTTGACATAAAGGTCATCAAAGACCTACCTTGGCCTCCGCCGGTGGGACAGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139819.8 |
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