Pregenerated sensors for SHE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046280Ensembl transcript IDs: ENSMUST00000050401.6
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGAGCACGCTCAGGCGTGTGGCAGAGGCCAGGTGACACCGACCTaGCAGGCCGGTGTTCATCAGAGTCATGAGGCGTGTGCCCAAATC | + |
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Preference number: 1 (lower is better) Translates to: REHAQACGRGQVTPT*QAGVHQSHEACAQI Trigger: GATTTGGGCACACGCCTCATGACTCTGATGAACACCGGCCTGGCAGGTCGGTGTCACCTGGCCTCTGCCACACGCCTGAGCGTGCTCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR TCA 90 bp | CCTACTGGTTCTCTGCCCAGCTCCCCTTCCTGTGGCAGAGACCAGTaGCTGAACTCCAGCACCACAGACGCAGACTCTAAACGGCCAACA | + |
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Preference number: 1 (lower is better) Translates to: PTGSLPSSPSCGRDQ*LNSSTTDADSKRPT Trigger: TGTTGGCCGTTTAGAGTCTGCGTCTGTGGTGCTGGAGTTCAGTCACTGGTCTCTGCCACAGGAAGGGGAGCTGGGCAGAGAACCAGTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR TCA 90 bp | CTGGTTCTCTGCCCAGCTCCCCTTCCTGTGGCAGAGACCAGTGACTaGACTCCAGCACCACAGACGCAGACTCTAAACGGCCAACAATAC | + |
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Preference number: 1 (lower is better) Translates to: LVLCPAPLPVAETSD*TPAPQTQTLNGQQY Trigger: GTATTGTTGGCCGTTTAGAGTCTGCGTCTGTGGTGCTGGAGTTCAGTCACTGGTCTCTGCCACAGGAAGGGGAGCTGGGCAGAGAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR GCA 90 bp | GTGAAGGCCACAGCTGCATCAGGACGTGGAGAAAGACAGCTTTCCTaGCCATCGTTCCTGTTTCCCACCGTCCATCCACTTCCTCACAAA | + |
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Preference number: 1 (lower is better) Translates to: VKATAASGRGERQLS*PSFLFPTVHPLPHK Trigger: TTTGTGAGGAAGTGGATGGACGGTGGGAAACAGGAACGATGGGCAGGAAAGCTGTCTTTCTCCACGTCCTGATGCAGCTGTGGCCTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR GCA 90 bp | AACCGAGAGCCCTGCACTACACATAGAAGCCAAAATGATTGTCAGTaGTGTGAGAACAGCCTTCGTGCAGGCCACTGTGCTCCACTGAGG | + |
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Preference number: 1 (lower is better) Translates to: NREPCTTHRSQNDCQ*CENSLRAGHCAPLR Trigger: CCTCAGTGGAGCACAGTGGCCTGCACGAAGGCTGTTCTCACAGCACTGACAATCATTTTGGCTTCTATGTGTAGTGCAGGGCTCTCGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CCA 90 bp | ACTATTAAGGTAGGACCTGTGTTGAGAAGAGCCAGCTTTCCCTACTaGTTCTCTGCCCAGCTCCCCTTCCTGTGGCAGAGACCAGTGACT | + |
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Preference number: 1 (lower is better) Translates to: TIKVGPVLRRASFPY*FSAQLPFLWQRPVT Trigger: AGTCACTGGTCTCTGCCACAGGAAGGGGAGCTGGGCAGAGAACCAGTAGGGAAAGCTGGCTCTTCTCAACACAGGTCCTACCTTAATAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR GCA 90 bp | GAGAGCCAACCAAATAATACTCTTGTGAAGTCCTCAGGTTGTGAATaGTGTGTGAAGGCCACAGCTGCATCAGGACGTGGAGAAAGACAG | + |
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Preference number: 1 (lower is better) Translates to: ESQPNNTLVKSSGCE*CVKATAASGRGERQ Trigger: CTGTCTTTCTCCACGTCCTGATGCAGCTGTGGCCTTCACACAGCATTCACAACCTGAGGACTTCACAAGAGTATTATTTGGTTGGCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR GCA 90 bp | GCATTCTCAGTAACCGGAAGGGACACCTGTTTCTTTACCACCACTTaGTTTTGTGCATACTCACTAGACTTCCTCCATTGTTTCTATTCC | + |
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Preference number: 1 (lower is better) Translates to: AFSVTGRDTCFFTTT*FCAYSLDFLHCFYS Trigger: GGAATAGAAACAATGGAGGAAGTCTAGTGAGTATGCACAAAAGCAAGTGGTGGTAAAGAAACAGGTGTCCCTTCCGGTTACTGAGAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR GCA 90 bp | CTGGACAGAATCTGCTATGCTATTACAGGAAGTAGAAATGCCCTTTaGCTTCCTGTATTCTTTTTGGAGACACCCTTGCTCTATTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: LDRICYAITGSRNAL*LPVFFLETPLLYCQ Trigger: TTGGCAATAGAGCAAGGGTGTCTCCAAAAAGAATACAGGAAGGCAAAGGGCATTTCTACTTCCTGTAATAGCATAGCAGATTCTGTCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR GCA 90 bp | AGTAACCGGAAGGGACACCTGTTTCTTTACCACCACTTGCTTTTGTaGATACTCACTAGACTTCCTCCATTGTTTCTATTCCTTCATTCA | + |
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Preference number: 1 (lower is better) Translates to: SNRKGHLFLYHHLLL*ILTRLPPLFLFLHS Trigger: TGAATGAAGGAATAGAAACAATGGAGGAAGTCTAGTGAGTATGCACAAAAGCAAGTGGTGGTAAAGAAACAGGTGTCCCTTCCGGTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CCA 90 bp | ACATTTCAAGATGGCAACTGCTGTGTCATCGTTTATTTTGATTTATaGACTGTATCAAAAATCCTTGAGACAAACTACCCTAAATGCACC | + |
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Preference number: 1 (lower is better) Translates to: TFQDGNCCVIVYFDL*TVSKILETNYPKCT Trigger: GGTGCATTTAGGGTAGTTTGTCTCAAGGATTTTTGATACAGTCCATAAATCAAAATAAACGATGACACAGCAGTTGCCATCTTGAAATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCAGCCCATTCCCACTAGCACCTACACACAGCGTGCCCCTCCTGTGGGATCTAGGCGCCGACTCCTaGTCTGCAGCAGCAGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: WSSPFPLAPTHSVPLLWDLGADS*SAAAAA Trigger: CGCTGCTGCTGCTGCAGACCAGGAGTCGGCGCCTAG...ATCCCACAGGAGGGGCACGCTGTGTGTAGGTGCTAGTGGGAATGGGCTGGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CAA 90 bp | TCCTGGTCTGCAGCAGCAGCAGCGAGTCCTGTCCACATGATGTTGTaGGGTGCTGAAGGCCTCACAGGTGCCCGGGCTCTTGCTGGCCGA | + |
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Preference number: 2 (lower is better) Translates to: SWSAAAAASPVHMML*GAEGLTGARALAGR Trigger: TCGGCCAGCAAGAGCCCGGGCACCTGTGAGGCCTTCAGCACCCAACAACATCATGTGGACAGGACTCGCTGCTGCTGCTGCAGACCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR GCA 90 bp | CTCCCCTTCCTGTGGCAGAGACCAGTGACTGAACTCCAGCACCACAGACGCAGATCGTGCAGGCCACTGTaGTCCACTGAGGAGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: LPFLWQRPVTELQHHRRRSCRPL*STEEKS Trigger: GGACTTCTCCTCAGTGGAGCACAGTGGCCTGCACGA...TCTGCGTCTGTGGTGCTGGAGTTCAGTCACTGGTCTCTGCCACAGGAAGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR GCA 90 bp | CAGCTTTCCTGCCCATCGTTCCTGTTTCCCACCGTCCATCCACTTCCTCACAAATGCAGAGGCCAGGCATaGCAGAGAACAGCCAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: QLSCPSFLFPTVHPLPHKCRGQA*QRTAKG Trigger: GCCCTTGGCTGTTCTCTGGCATGCCTGGCCTCTGCA...TTTGTGAGGAAGTGGATGGACGGTGGGAAACAGGAACGATGGGCAGGAAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR GCA 90 bp | CTCCCCTTCCTGTGGCAGAGACCAGTGACTGAACTCCAGCACCACAGACGCAGAAACTCCTCCTGTCTCTaGCTCCTCAGCACATCCTAC | + |
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Preference number: 2 (lower is better) Translates to: LPFLWQRPVTELQHHRRRNSSCL*LLSTSY Trigger: GTAGGATGTGCTGAGGAGGCAGAGACAGGAGGAGTT...TCTGCGTCTGTGGTGCTGGAGTTCAGTCACTGGTCTCTGCCACAGGAAGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTTCTGGTCCAGCCCATTCCCACTAGCACCTACACACAGCGTGCCCCTCCTGAGCTGCATCAGGACGTaGAGAAAGACAGCTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: WFWSSPFPLAPTHSVPLLSCIRT*RKTAFL Trigger: CAGGAAAGCTGTCTTTCTCCACGTCCTGATGCAGCT...CAGGAGGGGCACGCTGTGTGTAGGTGCTAGTGGGAATGGGCTGGACCAGAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR TCA 90 bp | CTCCCCTTCCTGTGGCAGAGACCAGTGACTGAACTCCAGCACCACAGACGCAGATTGGCTAAGGTCCGCTaGCACAGGAGCAAAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: LPFLWQRPVTELQHHRRRLAKVR*HRSKSL Trigger: AAGACTTTTGCTCCTGTGTCAGCGGACCTTAGCCAA...TCTGCGTCTGTGGTGCTGGAGTTCAGTCACTGGTCTCTGCCACAGGAAGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR TCA 90 bp | CCTGGACAGCATGTGGATACTGGAACTAACCAGGGTCTTCTACAAGTGCAGCATTGGCAGGCTCACCAGTaGGTGGTTAGGACACCCTGC | + |
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Preference number: 2 (lower is better) Translates to: PGQHVDTGTNQGLLQVQHWQAHQ*VVRTPC Trigger: GCAGGGTGTCCTAACCACTCACTGGTGAGCCTGCCA...ATGCTGCACTTGTAGAAGACCCTGGTTAGTTCCAGTATCCACATGCTGTCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR GCA 90 bp | GTTCCTGCCCAGTACCCTCAGAAGCCAGAAGAGGGCGCCAGATCCCCTAGACCTGGACAGCTCTCTAGATaGTATAGATGTTCACAGCAT | + |
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Preference number: 2 (lower is better) Translates to: VPAQYPQKPEEGARSPRPGQLSR*YRCSQH Trigger: ATGCTGTGAACATCTATAGCATCTAGAGAGCTGTCC...AGGTCTAGGGGATCTGGCGCCCTCTTCTGGCTTCTGAGGGTACTGGGCAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR TCA 90 bp | AGTAGAAATGCCCTTTGCCTTCCTGTATTCTTTTTGGAGACACCCTTGCTCTATGATGTTGTTGGGTGCTaGAGGCCTCACAGGTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: SRNALCLPVFFLETPLLYDVVGC*RPHRCP Trigger: CGGGCACCTGTGAGGCCTTCAGCACCCAACAACATC...ATAGAGCAAGGGTGTCTCCAAAAAGAATACAGGAAGGCAAAGGGCATTTCTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR TCA 90 bp | CCTGGACAGCATGTGGATACTGGAACTAACCAGGGTCTTCTACAAGTGCAGCATCGCCCCCTCAGACAGTaGTTAGAATACATCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: PGQHVDTGTNQGLLQVQHRPLRQ*LEYIWT Trigger: TGTCCAGATGTATTCTAATCACTGTCTGAGGGGGCG...ATGCTGCACTTGTAGAAGACCCTGGTTAGTTCCAGTATCCACATGCTGTCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR GCA 90 bp | CTCCCCTTCCTGTGGCAGAGACCAGTGACTGAACTCCAGCACCACAGACGCAGAAGTAGAAATGCCCTTTaGCTTCCTGTATTCTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LPFLWQRPVTELQHHRRRSRNAL*LPVFFL Trigger: CAAAAAGAATACAGGAAGGCAAAGGGCATTTCTACT...TCTGCGTCTGTGGTGCTGGAGTTCAGTCACTGGTCTCTGCCACAGGAAGGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR CCA 90 bp | CTACAAGTGCAGCATTTTCCACCTCTGAGCCATTTCTTTGGCCCAAGGTGTAACGCCCAAGGGAGAAGGTaGCAGGCAAGCAATACTTTC | + |
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Preference number: 2 (lower is better) Translates to: LQVQHFPPLSHFFGPRCNAQGRR*QASNTF Trigger: GAAAGTATTGCTTGCCTGCCACCTTCTCCCTTGGGC...GTTACACCTTGGGCCAAAGAAATGGCTCAGAGGTGGAAAATGCTGCACTTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCAGCCCATTCCCACTAGCACCTACACACAGCGTGCCCCTCCTGTGGGATACTCAGTTCATACAATaGGATCCCAATTTTGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: WSSPFPLAPTHSVPLLWDTQFIQ*DPNFVV Trigger: TACAACAAAATTGGGATCCCATTGTATGAACTGAGT...ATCCCACAGGAGGGGCACGCTGTGTGTAGGTGCTAGTGGGAATGGGCTGGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGCAGCATTTTCCACCTCTGAGCCATTTCTTTGGCCCAAGGTGTAACCCAGACCTCCTGGACAGCTaGATGGATTACAGATGCCTT | + |
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Preference number: 2 (lower is better) Translates to: QVQHFPPLSHFFGPRCNPDLLDS*MDYRCL Trigger: AAGGCATCTGTAATCCATCCAGCTGTCCAGGAGGTC...TGGGTTACACCTTGGGCCAAAGAAATGGCTCAGAGGTGGAAAATGCTGCACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CAA 90 bp | TTTTGGAGACACCCTTGCTCTATTGCCAAGGTTAGTTTTGGACTCTaGGACCTCCTGGACAGCTGGATGGATTACAGATGCCTTCCGTTC | + |
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Preference number: 2 (lower is better) Translates to: FWRHPCSIAKVSFGL*DLLDSWMDYRCLPF Trigger: GAACGGAAGGCATCTGTAATCCATCCAGCTGTCCAGGAGGTCCAAGAGTCCAAAACTAACCTTGGCAATAGAGCAAGGGTGTCTCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CAA 90 bp | TGCCCTTTGCCTTCCTGTATTCTTTTTGGAGACACCCTTGCTCTATaGCCAAGGTTAGTTTTGGACTCTTGGACCTCCTGGACAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: CPLPSCILFGDTLAL*PRLVLDSWTSWTAG Trigger: TCCAGCTGTCCAGGAGGTCCAAGAGTCCAAAACTAACCTTGGCAATAGAGCAAGGGTGTCTCCAAAAAGAATACAGGAAGGCAAAGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR GCA 90 bp | CAATACAGGCTGTTCTTACAGATGCCTATTAAAGCATTCTCAGTAACCGGAAGGAGGGGTTCTCTGTTGTaGAGAGGCCAGGCATGCCAG | + |
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Preference number: 2 (lower is better) Translates to: QYRLFLQMPIKAFSVTGRRGSLL*RGQACQ Trigger: CTGGCATGCCTGGCCTCTGCACAACAGAGAACCCCT...CCTTCCGGTTACTGAGAATGCTTTAATAGGCATCTGTAAGAACAGCCTGTATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CAA 90 bp | TGTATTCTTTTTGGAGACACCCTTGCTCTATTGCCAAGGTTAGTTTaGGACTCTTGGACCTCCTGGACAGCTGGATGGATTACAGATGCC | + |
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Preference number: 2 (lower is better) Translates to: CILFGDTLALLPRLV*DSWTSWTAGWITDA Trigger: GGCATCTGTAATCCATCCAGCTGTCCAGGAGGTCCAAGAGTCCAAAACTAACCTTGGCAATAGAGCAAGGGTGTCTCCAAAAAGAATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR CCA 90 bp | GTGAACAACATGACCCAGCCTAGGTCCAGGGGAAGACTAGGAGTCAAAACACCCCCCTACCATGAAGACTaGACTATATATAAACTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VNNMTQPRSRGRLGVKTPPYHED*TIYKLC Trigger: ACAGAGTTTATATATAGTCCAGTCTTCATGGTAGGG...GGGTGTTTTGACTCCTAGTCTTCCCCTGGACCTAGGCTGGGTCATGTTGTTCAC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR CCA 90 bp | AGTAGAAATGCCCTTTGCCTTCCTGTATTCTTTTTGGAGACACCCTTGCTCTATCATGTAAAGCAAATATaGAGGGAGCACGCTCAGGCG | + |
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Preference number: 2 (lower is better) Translates to: SRNALCLPVFFLETPLLYHVKQI*REHAQA Trigger: CGCCTGAGCGTGCTCCCTCCATATTTGCTTTACATG...ATAGAGCAAGGGTGTCTCCAAAAAGAATACAGGAAGGCAAAGGGCATTTCTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR GCA 90 bp | CCTGGACAGCATGTGGATACTGGAACTAACCAGGGTCTTCTACAAGTGCAGCATATATCACTGATTTACTaGAGAAGGATAGAGATGTCC | + |
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Preference number: 2 (lower is better) Translates to: PGQHVDTGTNQGLLQVQHISLIY*RRIEMS Trigger: GGACATCTCTATCCTTCTGCAGTAAATCAGTGATAT...ATGCTGCACTTGTAGAAGACCCTGGTTAGTTCCAGTATCCACATGCTGTCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CAA 90 bp | AGCATTCTCAGTAACCGGAAGGGACACCTGTTTCTTTACCACCACTaGCTTTTGTGCATACTCACTAGACTTCCTCCATTGTTTCTATTC | + |
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Preference number: 2 (lower is better) Translates to: SILSNRKGHLFLYHH*LLCILTRLPPLFLF Trigger: GAATAGAAACAATGGAGGAAGTCTAGTGAGTATGCACAAAAGCAAGTGGTGGTAAAGAAACAGGTGTCCCTTCCGGTTACTGAGAATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CAA 90 bp | TATTCCTTCATTCAGGTTTTTAAAAAGTTTATGTGCATGAATGTTTaGCTTGTATGTGTACCATGTTCCTGCCCAGTACCCTCAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: YSFIQVFKKFMCMNV*LVCVPCSCPVPSEA Trigger: GGCTTCTGAGGGTACTGGGCAGGAACATGGTACACATACAAGCAAAACATTCATGCACATAAACTTTTTAAAAACCTGAATGAAGGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR CCA 90 bp | CAATACAGGCTGTTCTTACAGATGCCTATTAAAGCATTCTCAGTAACCGGAAGGTCTAAGTCCATACTCTaGAACAAAGAAAGCAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: QYRLFLQMPIKAFSVTGRSKSIL*NKESSF Trigger: AAAACTGCTTTCTTTGTTCCAGAGTATGGACTTAGA...CCTTCCGGTTACTGAGAATGCTTTAATAGGCATCTGTAAGAACAGCCTGTATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CAA 90 bp | GCTGTGTCATCGTTTATTTTGATTTATGGACTGTATCAAAAATCCTaGAGACAAACTACCCTAAATGCACCCTTGTTTCTCAACTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: AVSSFILIYGLYQKS*RQTTLNAPLFLNCS Trigger: ACTGCAGTTGAGAAACAAGGGTGCATTTAGGGTAGTTTGTCTCAAGGATTTTTGATACAGTCCATAAATCAAAATAAACGATGACACAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR GCA 72 bp | GCTCAGGCGTGTGGCAGAGGCCAGGTGACACCGACCTaGCAGGCCGGTGTTCATCAGAGTCATGAGGCGTGT | + |
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Preference number: 3 (lower is better) Translates to: AQACGRGQVTPT*QAGVHQSHEAC Trigger: ACACGCCTCATGACTCTGATGAACACCGGCCTGGCAGGTCGGTGTCACCTGGCCTCTGCCACACGCCTGAGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR TCA 72 bp | AGCAGCGAGTCCTGTCCACATGATGTTGTTGGGTGCTaGAGGCCTCACAGGTGCCCGGGCTCTTGCTGGCCG | + |
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Preference number: 3 (lower is better) Translates to: SSESCPHDVVGC*RPHRCPGSCWP Trigger: CGGCCAGCAAGAGCCCGGGCACCTGTGAGGCCTTCAGCACCCAACAACATCATGTGGACAGGACTCGCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CCA 72 bp | TGTAAAGCAAATATGGAGGGAGCACGCTCAGGCGTGTaGCAGAGGCCAGGTGACACCGACCTGCCAGGCCGG | + |
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Preference number: 3 (lower is better) Translates to: CKANMEGARSGV*QRPGDTDLPGR Trigger: CCGGCCTGGCAGGTCGGTGTCACCTGGCCTCTGCCACACGCCTGAGCGTGCTCCCTCCATATTTGCTTTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR GCA 72 bp | ACAGACCGCTTGACTTCTAGGCGCCGACTCCTGGTCTaGAGCAGCAGCAGCGAGTCCTGTCCACATGATGTT | + |
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Preference number: 3 (lower is better) Translates to: TDRLTSRRRLLV*SSSSESCPHDV Trigger: AACATCATGTGGACAGGACTCGCTGCTGCTGCTGCAGACCAGGAGTCGGCGCCTAGAAGTCAAGCGGTCTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR-3UTR CAA 90 bp | GTTCCTGCCCAGTACCCTCAGAAGCCAGAAGAGGGCGCCAGATCCCCTAGACCTTTGCCAAGGTTAGTTTaGGACTCTTGGACCTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VPAQYPQKPEEGARSPRPLPRLV*DSWTSW Trigger: CCAGGAGGTCCAAGAGTCCAAAACTAACCTTGGCAA...AGGTCTAGGGGATCTGGCGCCCTCTTCTGGCTTCTGAGGGTACTGGGCAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR TCA 72 bp | TCTCTGCCCAGCTCCCCTTCCTGTGGCAGAGACCAGTaGCTGAACTCCAGCACCACAGACGCAGACTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: SLPSSPSCGRDQ*LNSSTTDADSK Trigger: TTTAGAGTCTGCGTCTGTGGTGCTGGAGTTCAGTCACTGGTCTCTGCCACAGGAAGGGGAGCTGGGCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR TCA 72 bp | AACCACTGTGTCCTGGATTTAAGACCACAGACCGCTTaGCTTCTAGGCGCCGACTCCTGGTCTGCAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: NHCVLDLRPQTA*LLGADSWSAAA Trigger: TGCTGCTGCAGACCAGGAGTCGGCGCCTAGAAGTCAAGCGGTCTGTGGTCTTAAATCCAGGACACAGTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR GCA 72 bp | ACAGCTGCATCAGGACGTGGAGAAAGACAGCTTTCCTaGCCATCGTTCCTGTTTCCCACCGTCCATCCACTT | + |
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Preference number: 3 (lower is better) Translates to: TAASGRGERQLS*PSFLFPTVHPL Trigger: AAGTGGATGGACGGTGGGAAACAGGAACGATGGGCAGGAAAGCTGTCTTTCTCCACGTCCTGATGCAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CCA 72 bp | AACTCCTCCTGTCTCTGCCTCCTCAGCACATCCTACTaGCCAGCGCCCCCTCAGACAGTGATTAGAATACAT | + |
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Preference number: 3 (lower is better) Translates to: NSSCLCLLSTSY*PAPPQTVIRIH Trigger: ATGTATTCTAATCACTGTCTGAGGGGGCGCTGGCCAGTAGGATGTGCTGAGGAGGCAGAGACAGGAGGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CCA 72 bp | TTAGTTTTGGACTCTTGGACCTCCTGGACAGCTGGATaGATTACAGATGCCTTCCGTTCTCAGGGGTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: LVLDSWTSWTAG*ITDAFRSQGSL Trigger: CAGGGACCCCTGAGAACGGAAGGCATCTGTAATCCATCCAGCTGTCCAGGAGGTCCAAGAGTCCAAAACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CCA 72 bp | ATGGGTGCTGGCTACAGAAGACAGAAAGACGACCAATaGCTGTCTGGTCCCAGGAAGGGAGCAATGAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: MGAGYRRQKDDQ*LSGPRKGAMKS Trigger: GGATTTCATTGCTCCCTTCCTGGGACCAGACAGCCATTGGTCGTCTTTCTGTCTTCTGTAGCCAGCACCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGACAGCATGTGGATACTGGAACTAACCAGGGTCTTCTACAAGTGCAGCATGTTAGTTTTGGACTCTaGGACCTCCTGGACAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PGQHVDTGTNQGLLQVQHVSFGL*DLLDSW Trigger: CCAGCTGTCCAGGAGGTCCAAGAGTCCAAAACTAAC...ATGCTGCACTTGTAGAAGACCCTGGTTAGTTCCAGTATCCACATGCTGTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCCTTCCTGTGGCAGAGACCAGTGACTGAACTCCAGCACCACAGACGCAGATTTCTTTACCACCACTaGCTTTTGTGCATACTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LPFLWQRPVTELQHHRRRFLYHH*LLCILT Trigger: AGTGAGTATGCACAAAAGCAAGTGGTGGTAAAGAAA...TCTGCGTCTGTGGTGCTGGAGTTCAGTCACTGGTCTCTGCCACAGGAAGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR TCA 72 bp | ACGACCAATGGCTGTCTGGTCCCAGGAAGGGAGCAATaGAATCCTAAGTTTCAGAAGCATGTACAGGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TTNGCLVPGREQ*NPKFQKHVQGA Trigger: TGCCCCCTGTACATGCTTCTGAAACTTAGGATTTCATTGCTCCCTTCCTGGGACCAGACAGCCATTGGTCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR GCA 72 bp | CCCTGCACTACACATAGAAGCCAAAATGATTGTCAGTaGTGTGAGAACAGCCTTCGTGCAGGCCACTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PCTTHRSQNDCQ*CENSLRAGHCA Trigger: AGCACAGTGGCCTGCACGAAGGCTGTTCTCACAGCACTGACAATCATTTTGGCTTCTATGTGTAGTGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR CCA 72 bp | GTTTATAAACCTGAACACGAAATGTTCCTCTGGTTCTaGTCCAGCCCATTCCCACTAGCACCTACACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: VYKPEHEMFLWF*SSPFPLAPTHS Trigger: GCTGTGTGTAGGTGCTAGTGGGAATGGGCTGGACCAGAACCAGAGGAACATTTCGTGTTCAGGTTTATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR TCA 72 bp | TTCCCTACAGTACACAGATCACGGATAAGCATGCGATaGTTTAGTGTCCTAGAGAGCAGAAGAGACAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FPTVHRSRISMR*FSVLESRRDSL Trigger: GAGGCTGTCTCTTCTGCTCTCTAGGACACTAAATCATCGCATGCTTATCCGTGATCTGTGTACTGTAGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR CCA 72 bp | GATCCAGTTTATAAACCTGAACACGAAATGTTCCTCTaGTTCTGGTCCAGCCCATTCCCACTAGCACCTACA | + |
|
Preference number: 3 (lower is better) Translates to: DPVYKPEHEMFL*FWSSPFPLAPT Trigger: TGTAGGTGCTAGTGGGAATGGGCTGGACCAGAACCAGAGGAACATTTCGTGTTCAGGTTTATAAACTGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR GCA 72 bp | CCCTTTGCCTTCCTGTATTCTTTTTGGAGACACCCTTaGTCTATTGCCAAGGTTAGTTTTGGACTCTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PFAFLYSFWRHP*SIAKVSFGLLD Trigger: GTCCAAGAGTCCAAAACTAACCTTGGCAATAGAGCAAGGGTGTCTCCAAAAAGAATACAGGAAGGCAAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR GCA 72 bp | GTAACCGGAAGGGACACCTGTTTCTTTACCACCACTTaGTTTTGTGCATACTCACTAGACTTCCTCCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: VTGRDTCFFTTT*FCAYSLDFLHC Trigger: ACAATGGAGGAAGTCTAGTGAGTATGCACAAAAGCAAGTGGTGGTAAAGAAACAGGTGTCCCTTCCGGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR GCA 72 bp | GGAATTGTGGCTACTGAAAACTTAAACCGAGAGCCCTaGACTACACATAGAAGCCAAAATGATTGTCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GIVATENLNREP*TTHRSQNDCQC Trigger: GCACTGACAATCATTTTGGCTTCTATGTGTAGTGCAGGGCTCTCGGTTTAAGTTTTCAGTAGCCACAATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR CCA 72 bp | GACAAAAGATTGATCCCAAGGGAGTTTACGGTTAAATaGGTGCTGGCTACAGAAGACAGAAAGACGACCAAT | + |
|
Preference number: 3 (lower is better) Translates to: DKRLIPREFTVK*VLATEDRKTTN Trigger: ATTGGTCGTCTTTCTGTCTTCTGTAGCCAGCACCCATTTAACCGTAAACTCCCTTGGGATCAATCTTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR-3UTR CAA 90 bp | CAATACAGGCTGTTCTTACAGATGCCTATTAAAGCATTCTCAGTAACCGGAAGGAAGGCACATATTGGCTaGTTCTGTCTGTACATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QYRLFLQMPIKAFSVTGRKAHIG*FCLYIR Trigger: CCTGATGTACAGACAGAACAAGCCAATATGTGCCTT...CCTTCCGGTTACTGAGAATGCTTTAATAGGCATCTGTAAGAACAGCCTGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR TCA 72 bp | TGTGCATCTGAGAAGCTACAAACCTTCAGTTTCCACTaGGGGTGGAACAGTCTTGAGATCCAGTTTATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CASEKLQTFSFH*GWNSLEIQFIN Trigger: GTTTATAAACTGGATCTCAAGACTGTTCCACCCTCAGTGGAAACTGAAGGTTTGTAGCTTCTCAGATGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR TCA 72 bp | ACAAACCTTCAGTTTCCACTGAGGGTGGAACAGTCTTaGGATCCAGTTTATAAACCTGAACACGAAATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: TNLQFPLRVEQS*DPVYKPEHEMF Trigger: GAACATTTCGTGTTCAGGTTTATAAACTGGATCTCAAGACTGTTCCACCCTCAGTGGAAACTGAAGGTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR GCA 72 bp | GCCTCCGTCCAATTTCTGCTCATATCACTGATTTACTaGAGAAGGATAGAGATGTCCAGAGAAATTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ASVQFLLISLIY*RRIEMSREIEK Trigger: TTTCTCAATTTCTCTGGACATCTCTATCCTTCTGCAGTAAATCAGTGATATGAGCAGAAATTGGACGGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR GCA 72 bp | AAGGGACACCTGTTTCTTTACCACCACTTGCTTTTGTaGATACTCACTAGACTTCCTCCATTGTTTCTATTC | + |
|
Preference number: 3 (lower is better) Translates to: KGHLFLYHHLLL*ILTRLPPLFLF Trigger: GAATAGAAACAATGGAGGAAGTCTAGTGAGTATGCACAAAAGCAAGTGGTGGTAAAGAAACAGGTGTCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR CCA 72 bp | GATGGCAACTGCTGTGTCATCGTTTATTTTGATTTATaGACTGTATCAAAAATCCTTGAGACAAACTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: DGNCCVIVYFDL*TVSKILETNYP Trigger: AGGGTAGTTTGTCTCAAGGATTTTTGATACAGTCCATAAATCAAAATAAACGATGACACAGCAGTTGCCATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CCA 90 bp | TGGTTCTGGTCCAGCCCATTCCCACTAGCACCTACACACAGCGTGCCCCTCCTGCGCTGCTCGCCTTGCTaGCCCCCAGCTCGGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WFWSSPFPLAPTHSVPLLRCSPC*PPARPL Trigger: CAGCGGCCGAGCTGGGGGCCAGCAAGGCGAGCAGCG...CAGGAGGGGCACGCTGTGTGTAGGTGCTAGTGGGAATGGGCTGGACCAGAACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR TCA 90 bp | TGGTTCTGGTCCAGCCCATTCCCACTAGCACCTACACACAGCGTGCCCCTCCTGCGGTGGCGGTGGCGGTaGCCCGGGAGTTCTTACGGC | + |
|
Preference number: 4 (lower is better) Translates to: WFWSSPFPLAPTHSVPLLRWRWR*PGSSYG Trigger: GCCGTAAGAACTCCCGGGTCACCGCCACCGCCACCG...CAGGAGGGGCACGCTGTGTGTAGGTGCTAGTGGGAATGGGCTGGACCAGAACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR GCA 90 bp | TGGTTCTGGTCCAGCCCATTCCCACTAGCACCTACACACAGCGTGCCCCTCCTGCCTCCTCTGGTAGCCTaGTGTCTGCTGGCCGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WFWSSPFPLAPTHSVPLLPPLVA*CLLAAS Trigger: AGACGCGGCCAGCAGACAGCAGGCTACCAGAGGAGG...CAGGAGGGGCACGCTGTGTGTAGGTGCTAGTGGGAATGGGCTGGACCAGAACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CCA 90 bp | CGTGGAGAAAGACAGCTTTCCTGCCCATCGTTCCTGTTTCCCACCGTCCATCCAAGCTGCTGGAGCTGCTaGTGCTGCCACCGCCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGERQLSCPSFLFPTVHPSCWSC*CCHRPG Trigger: ACCCGGGCGGTGGCAGCACCAGCAGCTCCAGCAGCT...TGGATGGACGGTGGGAAACAGGAACGATGGGCAGGAAAGCTGTCTTTCTCCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CCA 90 bp | TGGTTCTGGTCCAGCCCATTCCCACTAGCACCTACACACAGCGTGCCCCTCCTGGGGCCATCAAGCAACTaGAGGGCCTTCACCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WFWSSPFPLAPTHSVPLLGPSSN*RAFTRG Trigger: TCCCCTGGTGAAGGCCCTCCAGTTGCTTGATGGCCC...CAGGAGGGGCACGCTGTGTGTAGGTGCTAGTGGGAATGGGCTGGACCAGAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR CAA 72 bp | GCAGCAGCAGCAGCGAGTCCTGTCCACATGATGTTGTaGGGTGCTGAAGGCCTCACAGGTGCCCGGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AAAAASPVHMML*GAEGLTGARAL Trigger: AAGAGCCCGGGCACCTGTGAGGCCTTCAGCACCCAACAACATCATGTGGACAGGACTCGCTGCTGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR GCA 90 bp | CAAGTGCAGCATTTTCCACCTCTGAGCCATTTCTTTGGCCCAAGGTGTAACCCAGTCCGCTGCTCGCCTTaGTGGCCCCCAGCTCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QVQHFPPLSHFFGPRCNPVRCSP*WPPARP Trigger: CGGCCGAGCTGGGGGCCAGCAAGGCGAGCAGCGGAC...TGGGTTACACCTTGGGCCAAAGAAATGGCTCAGAGGTGGAAAATGCTGCACTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CCA 90 bp | GATCTAACCTTCCTAAGGCTCACACTCCAAACAGAACTCCTAGCCCAAGGGAGAGTCACCGCGCCACGGTaGGGCTCCTCCTCGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DLTFLRLTLQTELLAQGRVTAPR*GSSSVA Trigger: CGCCACCGAGGAGGAGCCCCACCGTGGCGCGGTGAC...TCTCCCTTGGGCTAGGAGTTCTGTTTGGAGTGTGAGCCTTAGGAAGGTTAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CCA 90 bp | CTCCCCTTCCTGTGGCAGAGACCAGTGACTGAACTCCAGCACCACAGACGCAGATCCCCAGCAGGTCCTTaGAGCTGCGTCTCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPFLWQRPVTELQHHRRRSPAGP*SCVSWL Trigger: CAGCCAAGAGACGCAGCTCCAAGGACCTGCTGGGGA...TCTGCGTCTGTGGTGCTGGAGTTCAGTCACTGGTCTCTGCCACAGGAAGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CCA 90 bp | GTTCCTGCCCAGTACCCTCAGAAGCCAGAAGAGGGCGCCAGATCCCCTAGACCTGGTGTCATAGAGTTGTaGCGGCTTCCCCAGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPAQYPQKPEEGARSPRPGVIEL*RLPQQV Trigger: GACCTGCTGGGGAAGCCGCCACAACTCTATGACACC...AGGTCTAGGGGATCTGGCGCCCTCTTCTGGCTTCTGAGGGTACTGGGCAGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR TCA 90 bp | CTACAAGTGCAGCATTTTCCACCTCTGAGCCATTTCTTTGGCCCAAGGTGTAACCCCCAGCTCGGCCGCTaGGTTCTTCCGGCCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQVQHFPPLSHFFGPRCNPQLGR*VLPALA Trigger: GGCAAGGGCCGGAAGAACTCAGCGGCCGAGCTGGGG...GTTACACCTTGGGCCAAAGAAATGGCTCAGAGGTGGAAAATGCTGCACTTGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR GCA 90 bp | CTCCCCTTCCTGTGGCAGAGACCAGTGACTGAACTCCAGCACCACAGACGCAGAGGTAAGCGGCTTCTTTaGAGGGCTGTAGTCGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPFLWQRPVTELQHHRRRGKRLL*RAVVGS Trigger: AGAGCCGACTACAGCCCTGCAAAGAAGCCGCTTACC...TCTGCGTCTGTGGTGCTGGAGTTCAGTCACTGGTCTCTGCCACAGGAAGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR GCA 90 bp | CTACAAGTGCAGCATTTTCCACCTCTGAGCCATTTCTTTGGCCCAAGGTGTAACAGGAGCTGCTGGAGCTaGTGGTGCTGCCACCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LQVQHFPPLSHFFGPRCNRSCWS*WCCHRP Trigger: CGGGCGGTGGCAGCACCAGCAGCTCCAGCAGCTCCT...GTTACACCTTGGGCCAAAGAAATGGCTCAGAGGTGGAAAATGCTGCACTTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR GCA 90 bp | CAGCTTTCCTGCCCATCGTTCCTGTTTCCCACCGTCCATCCACTTCCTCACAAAGTCTTCTGCCAGTGGTaGGGTCTCCCTGCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLSCPSFLFPTVHPLPHKVFCQW*GLPASS Trigger: AGAGGATGCAGGGAGACCGCACCACTGGCAGAAGAC...TTTGTGAGGAAGTGGATGGACGGTGGGAAACAGGAACGATGGGCAGGAAAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CCA 90 bp | CCTGGACAGCATGTGGATACTGGAACTAACCAGGGTCTTCTACAAGTGCAGCATCAGCCGACTGTCCTTTaGGGGTCCGCTGCTCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGQHVDTGTNQGLLQVQHQPTVL*GSAARL Trigger: AAGGCGAGCAGCGGACCCCCAAAGGACAGTCGGCTG...ATGCTGCACTTGTAGAAGACCCTGGTTAGTTCCAGTATCCACATGCTGTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR CAA 72 bp | AAACCACTGTGTCCTGGATTTAAGACCACAGACCGCTaGACTTCTAGGCGCCGACTCCTGGTCTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPLCPGFKTTDR*TSRRRLLVCSS Trigger: GCTGCTGCAGACCAGGAGTCGGCGCCTAGAAGTCAAGCGGTCTGTGGTCTTAAATCCAGGACACAGTGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR TCA 90 bp | CTACAAGTGCAGCATTTTCCACCTCTGAGCCATTTCTTTGGCCCAAGGTGTAACCGCGGAGCAGAAGAGTaGGGAGGCCCAGCTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LQVQHFPPLSHFFGPRCNRGAEE*GGPAET Trigger: TGTCTCAGCTGGGCCTCCTCACTCTTCTGCTCCGCG...GTTACACCTTGGGCCAAAGAAATGGCTCAGAGGTGGAAAATGCTGCACTTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR GCA 90 bp | CACATAGAAGCCAAAATGATTGTCAGTGCTGTGAGAACAGCCTTCGTGCAGGCCGCAGGTCCTTGGAGCTaGGTCTCTTGGCTGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HIEAKMIVSAVRTAFVQAAGPWS*VSWLWP Trigger: AGGCCACAGCCAAGAGACGCAGCTCCAAGGACCTGC...GGCCTGCACGAAGGCTGTTCTCACAGCACTGACAATCATTTTGGCTTCTATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CCA 90 bp | CTACAAGTGCAGCATTTTCCACCTCTGAGCCATTTCTTTGGCCCAAGGTGTAACTTGCCAGCAGCGGCCTaGATCAGACCCTGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQVQHFPPLSHFFGPRCNLPAAA*IRPCRL Trigger: CAGCCTGCAGGGTCTGATCCAGGCCGCTGCTGGCAA...GTTACACCTTGGGCCAAAGAAATGGCTCAGAGGTGGAAAATGCTGCACTTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CCA 90 bp | TGGTCCAGCCCATTCCCACTAGCACCTACACACAGCGTGCCCCTCCTGTGGGATAACACAGCGCTCGTCTaGTTCAGTGTGTATTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WSSPFPLAPTHSVPLLWDNTALV*FSVYLL Trigger: CAACAAATACACACTGAACCAGACGAGCGCTGTGTT...ATCCCACAGGAGGGGCACGCTGTGTGTAGGTGCTAGTGGGAATGGGCTGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR TCA 90 bp | CGTGGAGAAAGACAGCTTTCCTGCCCATCGTTCCTGTTTCCCACCGTCCATCCATTGTCTGAGCCACTATaGTGTGGACACACCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RGERQLSCPSFLFPTVHPLSEPL*CGHTLD Trigger: GTCAAGGGTGTGTCCACATCATAGTGGCTCAGACAA...TGGATGGACGGTGGGAAACAGGAACGATGGGCAGGAAAGCTGTCTTTCTCCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR GCA 90 bp | GCTCTGGATCTAACCTTCCTAAGGCTCACACTCCAAACAGAACTCCTAGCCCAAGGCTTCAAGGTCTTCTaGCAGTGGTGCGGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALDLTFLRLTLQTELLAQGFKVF*QWCGLP Trigger: AGGGAGACCGCACCACTGGCAGAAGACCTTGAAGCC...TTGGGCTAGGAGTTCTGTTTGGAGTGTGAGCCTTAGGAAGGTTAGATCCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR GCA 90 bp | CGTGGAGAAAGACAGCTTTCCTGCCCATCGTTCCTGTTTCCCACCGTCCATCCATGGAGAAGGGTCATGTaGTCTGCTCCTTTGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGERQLSCPSFLFPTVHPWRRVM*SAPLKG Trigger: GCCTTTCAAAGGAGCAGAGCACATGACCCTTCTCCA...TGGATGGACGGTGGGAAACAGGAACGATGGGCAGGAAAGCTGTCTTTCTCCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR TCA 90 bp | GATCTAACCTTCCTAAGGCTCACACTCCAAACAGAACTCCTAGCCCAAGGGAGACTCTCCGCATCCCTTTaGCCTTTCGTCCGTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLTFLRLTLQTELLAQGRLSASL*PFVRLA Trigger: TGCCAAACGGACGAAAGGTCAAAGGGATGCGGAGAG...TCTCCCTTGGGCTAGGAGTTCTGTTTGGAGTGTGAGCCTTAGGAAGGTTAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR GCA 90 bp | CAATACAGGCTGTTCTTACAGATGCCTATTAAAGCATTCTCAGTAACCGGAAGGGTGGTGCGGTCTCCCTaGATCCTCTCTGCCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QYRLFLQMPIKAFSVTGRVVRSP*ILSARR Trigger: CCTCCGGGCAGAGAGGATGCAGGGAGACCGCACCAC...CCTTCCGGTTACTGAGAATGCTTTAATAGGCATCTGTAAGAACAGCCTGTATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR TCA 90 bp | CACATAGAAGCCAAAATGATTGTCAGTGCTGTGAGAACAGCCTTCGTGCAGGCCATACTTGCTGTTCCCTaGCTCACTGTTCCGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HIEAKMIVSAVRTAFVQAILAVP*LTVPDQ Trigger: CTGGTCCGGAACAGTGAGTCAGGGAACAGCAAGTAT...GGCCTGCACGAAGGCTGTTCTCACAGCACTGACAATCATTTTGGCTTCTATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CCA 90 bp | CGTGGAGAAAGACAGCTTTCCTGCCCATCGTTCCTGTTTCCCACCGTCCATCCATCGTCTTCAGTGCAATaGAATACTTGCTGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGERQLSCPSFLFPTVHPSSSVQ*NTCCSL Trigger: CAGGGAACAGCAAGTATTCCATTGCACTGAAGACGA...TGGATGGACGGTGGGAAACAGGAACGATGGGCAGGAAAGCTGTCTTTCTCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CCA 90 bp | CCTGGACAGCATGTGGATACTGGAACTAACCAGGGTCTTCTACAAGTGCAGCATGTGGAGCTTGTGCACTaGATGGAGAAGGGTCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGQHVDTGTNQGLLQVQHVELVH*MEKGHV Trigger: CACATGACCCTTCTCCATCCAGTGCACAAGCTCCAC...ATGCTGCACTTGTAGAAGACCCTGGTTAGTTCCAGTATCCACATGCTGTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR GCA 90 bp | CTACAAGTGCAGCATTTTCCACCTCTGAGCCATTTCTTTGGCCCAAGGTGTAACGTACCACTTCAGGGATaGTGTCAAACACAGCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LQVQHFPPLSHFFGPRCNVPLQG*CQTQRS Trigger: CGAGCGCTGTGTTTGACAGCATCCCTGAAGTGGTAC...GTTACACCTTGGGCCAAAGAAATGGCTCAGAGGTGGAAAATGCTGCACTTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CCA 90 bp | AGTAGAAATGCCCTTTGCCTTCCTGTATTCTTTTTGGAGACACCCTTGCTCTATAGGAAGAGGAGCTGCTaGAGCTGCTGGTGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRNALCLPVFFLETPLLYRKRSC*SCWCCH Trigger: GTGGCAGCACCAGCAGCTCCAGCAGCTCCTCTTCCT...ATAGAGCAAGGGTGTCTCCAAAAAGAATACAGGAAGGCAAAGGGCATTTCTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR CCA 90 bp | CCTGGACAGCATGTGGATACTGGAACTAACCAGGGTCTTCTACAAGTGCAGCATAGCTTGTGCACTGGATaGAGAAGGGTCATGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGQHVDTGTNQGLLQVQHSLCTG*RRVMCS Trigger: AGAGCACATGACCCTTCTCCATCCAGTGCACAAGCT...ATGCTGCACTTGTAGAAGACCCTGGTTAGTTCCAGTATCCACATGCTGTCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CAA 72 bp | CACCCTTGCTCTATTGCCAAGGTTAGTTTTGGACTCTaGGACCTCCTGGACAGCTGGATGGATTACAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HPCSIAKVSFGL*DLLDSWMDYRC Trigger: GCATCTGTAATCCATCCAGCTGTCCAGGAGGTCCAAGAGTCCAAAACTAACCTTGGCAATAGAGCAAGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR GCA 90 bp | GCTCTGGATCTAACCTTCCTAAGGCTCACACTCCAAACAGAACTCCTAGCCCAAATGATGACCGTGTCTTaGTGTCTCATTATCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALDLTFLRLTLQTELLAQMMTVS*CLIILA Trigger: GGCCAAGATAATGAGACAGCAAGACACGGTCATCAT...TTGGGCTAGGAGTTCTGTTTGGAGTGTGAGCCTTAGGAAGGTTAGATCCAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR GCA 90 bp | GTGAACAACATGACCCAGCCTAGGTCCAGGGGAAGACTAGGAGTCAAAACACCCTTTGAAAGGCAGCTTTaGATTGGAGTAATAGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VNNMTQPRSRGRLGVKTPFERQL*IGVIVY Trigger: GTACACTATTACTCCAATGCAAAGCTGCCTTTCAAA...GGGTGTTTTGACTCCTAGTCTTCCCCTGGACCTAGGCTGGGTCATGTTGTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR CCA 90 bp | CAATACAGGCTGTTCTTACAGATGCCTATTAAAGCATTCTCAGTAACCGGAAGGGCTGTCTCATTATCTTaGCCTTGTCCAGCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QYRLFLQMPIKAFSVTGRAVSLS*PCPAQG Trigger: GCCCTGAGCTGGACAAGGCCAAGATAATGAGACAGC...CCTTCCGGTTACTGAGAATGCTTTAATAGGCATCTGTAAGAACAGCCTGTATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CAA 72 bp | CCTTCCTGTATTCTTTTTGGAGACACCCTTGCTCTATaGCCAAGGTTAGTTTTGGACTCTTGGACCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSCILFGDTLAL*PRLVLDSWTSW Trigger: CCAGGAGGTCCAAGAGTCCAAAACTAACCTTGGCAATAGAGCAAGGGTGTCTCCAAAAAGAATACAGGAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR TCA 90 bp | CAATACAGGCTGTTCTTACAGATGCCTATTAAAGCATTCTCAGTAACCGGAAGGTGTGCTCTGCTCCTTTaGAAGGCAGCTTTGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: QYRLFLQMPIKAFSVTGRCALLL*KAALHW Trigger: CCAATGCAAAGCTGCCTTTCAAAGGAGCAGAGCACA...CCTTCCGGTTACTGAGAATGCTTTAATAGGCATCTGTAAGAACAGCCTGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR GCA 90 bp | GCTCTGGATCTAACCTTCCTAAGGCTCACACTCCAAACAGAACTCCTAGCCCAATGTTATCATCTGTTGTaGATCGTACGGTTCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALDLTFLRLTLQTELLAQCYHLL*IVRFHV Trigger: TACATGGAACCGTACGATGCACAACAGATGATAACA...TTGGGCTAGGAGTTCTGTTTGGAGTGTGAGCCTTAGGAAGGTTAGATCCAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR GCA 90 bp | GCTCTGGATCTAACCTTCCTAAGGCTCACACTCCAAACAGAACTCCTAGCCCAATTGACTCGTCTTCAGTaGAATGGAATACTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALDLTFLRLTLQTELLAQLTRLQ*NGILAV Trigger: AACAGCAAGTATTCCATTGCACTGAAGACGAGTCAA...TTGGGCTAGGAGTTCTGTTTGGAGTGTGAGCCTTAGGAAGGTTAGATCCAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CAA 72 bp | CGGAAGGGACACCTGTTTCTTTACCACCACTTGCTTTaGTGCATACTCACTAGACTTCCTCCATTGTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RKGHLFLYHHLL*CILTRLPPLFL Trigger: TAGAAACAATGGAGGAAGTCTAGTGAGTATGCACAAAAGCAAGTGGTGGTAAAGAAACAGGTGTCCCTTCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR TCA 90 bp | AGTAGAAATGCCCTTTGCCTTCCTGTATTCTTTTTGGAGACACCCTTGCTCTATTTGTTGTCTTTTGTCTaGGCCACTATGATGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SRNALCLPVFFLETPLLYLLSFV*ATMMWT Trigger: TGTCCACATCATAGTGGCTCAGACAAAAGACAACAA...ATAGAGCAAGGGTGTCTCCAAAAAGAATACAGGAAGGCAAAGGGCATTTCTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR GCA 90 bp | CTAGAGAGCAGAAGAGACAGCCTCAGACTACAATATTGTTCAAAATGTTTCTGTGTGCAATGGAATACTTaGTGTTCCCTGACTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LESRRDSLRLQYCSKCFCVQWNT*CSLTHC Trigger: ACAGTGAGTCAGGGAACAGCAAGTATTCCATTGCAC...ACAGAAACATTTTGAACAATATTGTAGTCTGAGGCTGTCTCTTCTGCTCTCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| 3UTR CAA 72 bp | TACAATATTGTTCAAAATGTTTCTGTAAGGCACATATaGGCTTGTTCTGTCTGTACATCAGGGGCAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YNIVQNVSVRHI*ACSVCTSGAIF Trigger: AAAGATTGCCCCTGATGTACAGACAGAACAAGCCAATATGTGCCTTACAGAAACATTTTGAACAATATTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| 3UTR CAA 72 bp | TCGTTTATTTTGATTTATGGACTGTATCAAAAATCCTaGAGACAAACTACCCTAAATGCACCCTTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFILIYGLYQKS*RQTTLNAPLFL Trigger: GAGAAACAAGGGTGCATTTAGGGTAGTTTGTCTCAAGGATTTTTGATACAGTCCATAAATCAAAATAAACGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS CCA 90 bp | TGGCCCCCAGCTCGGCCGCTGAGTTCTTCCGGCCCTTGCCCGGGGTaGGCGCCGCGCCGCCAGTCTCCGAGTTCTTGCGCGGCTTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: WPPARPLSSSGPCPG*APRRQSPSSCAACR Trigger: GCGGCAAGCCGCGCAAGAACTCGGAGACTGGCGGCGCGGCGCCCACCCCGGGCAAGGGCCGGAAGAACTCAGCGGCCGAGCTGGGGGCCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 90 bp | TCGCCTTGCTGGCCCCCAGCTCGGCCGCTGAGTTCTTCCGGCCCTTaGCCGGGGTGGGCGCCGCGCCGCCAGTCTCCGAGTTCTTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPCWPPARPLSSSGP*PGWAPRRQSPSSCA Trigger: CGCGCAAGAACTCGGAGACTGGCGGCGCGGCGCCCACCCCGGGCAAGGGCCGGAAGAACTCAGCGGCCGAGCTGGGGGCCAGCAAGGCGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 90 bp | CCCGGGACAGCCGACTGTCCTTTGGGGGTCCGCTGCTCGCCTTGCTaGCCCCCAGCTCGGCCGCTGAGTTCTTCCGGCCCTTGCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGTADCPLGVRCSPC*PPARPLSSSGPCPG Trigger: CCCCGGGCAAGGGCCGGAAGAACTCAGCGGCCGAGCTGGGGGCCAGCAAGGCGAGCAGCGGACCCCCAAAGGACAGTCGGCTGTCCCGGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 90 bp | TGTCCCGGGACAGCCGACTGTCCTTTGGGGGTCCGCTGCTCGCCTTaGTGGCCCCCAGCTCGGCCGCTGAGTTCTTCCGGCCCTTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CPGTADCPLGVRCSP*WPPARPLSSSGPCP Trigger: CGGGCAAGGGCCGGAAGAACTCAGCGGCCGAGCTGGGGGCCAGCAAGGCGAGCAGCGGACCCCCAAAGGACAGTCGGCTGTCCCGGGACA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 90 bp | CCTGCAGGCTGTCCCGGGACAGCCGACTGTCCTTTGGGGGTCCGCTaGTCGCCTTGCTGGCCCCCAGCTCGGCCGCTGAGTTCTTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAGCPGTADCPLGVR*SPCWPPARPLSSSG Trigger: GCCGGAAGAACTCAGCGGCCGAGCTGGGGGCCAGCAAGGCGAGCAGCGGACCCCCAAAGGACAGTCGGCTGTCCCGGGACAGCCTGCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS TCA 90 bp | TGGTCACCGCGCCACGGTGGGGCTCCTCCTCGGTGGCGGTGGCGGTaGCCCGGGAGTTCTTACGGCCTTTGCCAGCAGCGGCCTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: WSPRHGGAPPRWRWR*PGSSYGLCQQRPGS Trigger: TGATCCAGGCCGCTGCTGGCAAAGGCCGTAAGAACTCCCGGGTCACCGCCACCGCCACCGAGGAGGAGCCCCACCGTGGCGCGGTGACCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 90 bp | CGGGAGTTCTTACGGCCTTTGCCAGCAGCGGCCTGGATCAGACCCTaGAGGCTGTCCCGGGACAGCCGACTGTCCTTTGGGGGTCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: REFLRPLPAAAWIRP*RLSRDSRLSFGGPL Trigger: CAGCGGACCCCCAAAGGACAGTCGGCTGTCCCGGGACAGCCTGCAGGGTCTGATCCAGGCCGCTGCTGGCAAAGGCCGTAAGAACTCCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR CAA 90 bp | CTCCCCTTCCTGTGGCAGAGACCAGTGACTGAACTCCAGCACCACAGACGCAGAGGTCCGCTGCTCGCCTaGCTGGCCCCCAGCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPFLWQRPVTELQHHRRRGPLLA*LAPSSA Trigger: GGCCGAGCTGGGGGCCAGCAAGGCGAGCAGCGGACC...TCTGCGTCTGTGGTGCTGGAGTTCAGTCACTGGTCTCTGCCACAGGAAGGGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 90 bp | ACGGGGAAGAGGACGCAGAGGAAGAGGAGCTGCTGGAGCTGCTGGTaGTGCCACCGCCCGGGTAGGCGCTCTTCCCATTCTTCTCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: TGKRTQRKRSCWSCW*CHRPGRRSSHSSPA Trigger: CGCAGGAGAAGAATGGGAAGAGCGCCTACCCGGGCGGTGGCAGCACCAGCAGCTCCAGCAGCTCCTCTTCCTCTGCGTCCTCTTCCCCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 90 bp | GTGGCGGTGACCCGGGAGTTCTTACGGCCTTTGCCAGCAGCGGCCTaGATCAGACCCTGCAGGCTGTCCCGGGACAGCCGACTGTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VAVTREFLRPLPAAA*IRPCRLSRDSRLSF Trigger: AAAGGACAGTCGGCTGTCCCGGGACAGCCTGCAGGGTCTGATCCAGGCCGCTGCTGGCAAAGGCCGTAAGAACTCCCGGGTCACCGCCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 90 bp | GGAGCTGCGTCTCTTGGCTGTGGCCTCCACCTTCACAGTCTCCCCTaGTTCACTCGGGCCATCAAGCAACTGGAGGGCCTTCACCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GAASLGCGLHLHSLP*FTRAIKQLEGLHQG Trigger: CCCCTGGTGAAGGCCCTCCAGTTGCTTGATGGCCCGAGTGAACCAGGGGAGACTGTGAAGGTGGAGGCCACAGCCAAGAGACGCAGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 90 bp | GTGGCGGCTTCCCCAGCAGGTCCTTGGAGCTGCGTCTCTTGGCTGTaGCCTCCACCTTCACAGTCTCCCCTGGTTCACTCGGGCCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: VAASPAGPWSCVSWL*PPPSQSPLVHSGHQ Trigger: TTGATGGCCCGAGTGAACCAGGGGAGACTGTGAAGGTGGAGGCCACAGCCAAGAGACGCAGCTCCAAGGACCTGCTGGGGAAGCCGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 90 bp | AGAGTTGTGGCGGCTTCCCCAGCAGGTCCTTGGAGCTGCGTCTCTTaGCTGTGGCCTCCACCTTCACAGTCTCCCCTGGTTCACTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RVVAASPAGPWSCVS*LWPPPSQSPLVHSG Trigger: GCCCGAGTGAACCAGGGGAGACTGTGAAGGTGGAGGCCACAGCCAAGAGACGCAGCTCCAAGGACCTGCTGGGGAAGCCGCCACAACTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 90 bp | TCACCGTGGTCTGACAGGGTCGGCTTCAAGGTCTTCTGCCAGTGGTaGGGTCTCCCTGCATCCTCTCTGCCCGGAGGTCGATCAGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPWSDRVGFKVFCQW*GLPASSLPGGRSDP Trigger: GGGATCTGATCGACCTCCGGGCAGAGAGGATGCAGGGAGACCGCACCACTGGCAGAAGACCTTGAAGCCGACCCTGTCAGACCACGGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 90 bp | CGTACGGGGTGTCATAGAGTTGTGGCGGCTTCCCCAGCAGGTCCTTaGAGCTGCGTCTCTTGGCTGTGGCCTCCACCTTCACAGTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RTGCHRVVAASPAGP*SCVSWLWPPPSQSP Trigger: GGGAGACTGTGAAGGTGGAGGCCACAGCCAAGAGACGCAGCTCCAAGGACCTGCTGGGGAAGCCGCCACAACTCTATGACACCCCGTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 90 bp | ACGTTGGCCACCCTCCGAAGGCTCGTACGGGGTGTCATAGAGTTGTaGCGGCTTCCCCAGCAGGTCCTTGGAGCTGCGTCTCTTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TLATLRRLVRGVIEL*RLPQQVLGAASLGC Trigger: ACAGCCAAGAGACGCAGCTCCAAGGACCTGCTGGGGAAGCCGCCACAACTCTATGACACCCCGTACGAGCCTTCGGAGGGTGGCCAACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 90 bp | GGGTGTCATAGAGTTGTGGCGGCTTCCCCAGCAGGTCCTTGGAGCTaGGTCTCTTGGCTGTGGCCTCCACCTTCACAGTCTCCCCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GCHRVVAASPAGPWS*VSWLWPPPSQSPLV Trigger: AACCAGGGGAGACTGTGAAGGTGGAGGCCACAGCCAAGAGACGCAGCTCCAAGGACCTGCTGGGGAAGCCGCCACAACTCTATGACACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 90 bp | CTCCCTGCATCCTCTCTGCCCGGAGGTCGATCAGATCCCTCAAACTaGACTGACAGGGCTCTCGCGATCTGCTCCCTCTTCCACTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPASSLPGGRSDPSN*TDRALAICSLFHSQ Trigger: CTGGGAGTGGAAGAGGGAGCAGATCGCGAGAGCCCTGTCAGTCCAGTTTGAGGGATCTGATCGACCTCCGGGCAGAGAGGATGCAGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 90 bp | GCTTCAAGGTCTTCTGCCAGTGGTGCGGTCTCCCTGCATCCTCTCTaGCCGGAGGTCGATCAGATCCCTCAAACTGGACTGACAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASRSSASGAVSLHPL*PEVDQIPQTGLTGL Trigger: GAGCCCTGTCAGTCCAGTTTGAGGGATCTGATCGACCTCCGGGCAGAGAGGATGCAGGGAGACCGCACCACTGGCAGAAGACCTTGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR CAA 90 bp | GTTCCTGCCCAGTACCCTCAGAAGCCAGAAGAGGGCGCCAGATCCCCTAGACCTTCTCTCCGCATCCCTTaGACCTTTCGTCCGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPAQYPQKPEEGARSPRPSLRIP*TFRPFG Trigger: GCCAAACGGACGAAAGGTCAAAGGGATGCGGAGAGA...AGGTCTAGGGGATCTGGCGCCCTCTTCTGGCTTCTGAGGGTACTGGGCAGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 90 bp | TCCACCTTCACAGTCTCCCCTGGTTCACTCGGGCCATCAAGCAACTaGAGGGCCTTCACCAGGGGATCTTTGGAACCACGGCGTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: STFTVSPGSLGPSSN*RAFTRGSLEPRRLI Trigger: AATCAGACGCCGTGGTTCCAAAGATCCCCTGGTGAAGGCCCTCCAGTTGCTTGATGGCCCGAGTGAACCAGGGGAGACTGTGAAGGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR CAA 90 bp | GTTCCTGCCCAGTACCCTCAGAAGCCAGAAGAGGGCGCCAGATCCCCTAGACCTTGCTGTCTCATTATCTaGGCCTTGTCCAGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPAQYPQKPEEGARSPRPCCLII*ALSSSG Trigger: CCCTGAGCTGGACAAGGCCAAGATAATGAGACAGCA...AGGTCTAGGGGATCTGGCGCCCTCTTCTGGCTTCTGAGGGTACTGGGCAGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR CAA 90 bp | CAGCTTTCCTGCCCATCGTTCCTGTTTCCCACCGTCCATCCACTTCCTCACAAACGGGGTGTCATAGAGTaGTGGCGGCTTCCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLSCPSFLFPTVHPLPHKRGVIE*WRLPQQ Trigger: CTGCTGGGGAAGCCGCCACAACTCTATGACACCCCG...TTTGTGAGGAAGTGGATGGACGGTGGGAAACAGGAACGATGGGCAGGAAAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR CAA 90 bp | CAATACAGGCTGTTCTTACAGATGCCTATTAAAGCATTCTCAGTAACCGGAAGGCTGCAGCCCGCGCTCTaGGTCACCGCGCCACGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QYRLFLQMPIKAFSVTGRLQPAL*VTAPRW Trigger: CCACCGTGGCGCGGTGACCAAGAGCGCGGGCTGCAG...CCTTCCGGTTACTGAGAATGCTTTAATAGGCATCTGTAAGAACAGCCTGTATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR CAA 90 bp | GATCTAACCTTCCTAAGGCTCACACTCCAAACAGAACTCCTAGCCCAAGGGAGATTGGAGCTGCGTCTCTaGGCTGTGGCCTCCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLTFLRLTLQTELLAQGRLELRL*AVASTF Trigger: GAAGGTGGAGGCCACAGCCAAGAGACGCAGCTCCAA...TCTCCCTTGGGCTAGGAGTTCTGTTTGGAGTGTGAGCCTTAGGAAGGTTAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS TCA 90 bp | ACACCCTTGACTCGTCTTCAGTGCAATGGAATACTTGCTGTTCCCTaGCTCACTGTTCCGGACCAGGTAAGCGGCTTCTTTGCAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPLTRLQCNGILAVP*LTVPDQVSGFFAGL Trigger: CAGCCCTGCAAAGAAGCCGCTTACCTGGTCCGGAACAGTGAGTCAGGGAACAGCAAGTATTCCATTGCACTGAAGACGAGTCAAGGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR CAA 90 bp | CAGCTTTCCTGCCCATCGTTCCTGTTTCCCACCGTCCATCCACTTCCTCACAAAAGTGCAATGGAATACTaGCTGTTCCCTGACTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QLSCPSFLFPTVHPLPHKSAMEY*LFPDSL Trigger: CAGTGAGTCAGGGAACAGCAAGTATTCCATTGCACT...TTTGTGAGGAAGTGGATGGACGGTGGGAAACAGGAACGATGGGCAGGAAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS TCA 90 bp | GGAGCTTGTGCACTGGATGGAGAAGGGTCATGTGCTCTGCTCCTTTaGAAGGCAGCTTTGCATTGGAGTAATAGTGTACCACTTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GACALDGEGSCALLL*KAALHWSNSVPLQG Trigger: TCCCTGAAGTGGTACACTATTACTCCAATGCAAAGCTGCCTTTCAAAGGAGCAGAGCACATGACCCTTCTCCATCCAGTGCACAAGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR CAA 90 bp | GCTCTGGATCTAACCTTCCTAAGGCTCACACTCCAAACAGAACTCCTAGCCCAAGATGTGGACACACCCTaGACTCGTCTTCAGTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ALDLTFLRLTLQTELLAQDVDTP*TRLQCN Trigger: ATTGCACTGAAGACGAGTCAAGGGTGTGTCCACATC...TTGGGCTAGGAGTTCTGTTTGGAGTGTGAGCCTTAGGAAGGTTAGATCCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CAA 90 bp | CAAGTGCAGCATTTTCCACCTCTGAGCCATTTCTTTGGCCCAAGGTGTAACCCAATGTGCTCTGCTCCTTaGAAAGGCAGCTTTGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: QVQHFPPLSHFFGPRCNPMCSAP*KGSFAL Trigger: CAATGCAAAGCTGCCTTTCAAAGGAGCAGAGCACAT...TGGGTTACACCTTGGGCCAAAGAAATGGCTCAGAGGTGGAAAATGCTGCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
||
| CDS-3UTR CAA 90 bp | GAGAGCCAACCAAATAATACTCTTGTGAAGTCCTCAGGTTGTGAATGCTGTGTGTTCACCAGGGGATCTTaGGAACCACGGCGTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: ESQPNNTLVKSSGCECCVFTRGS*EPRRLI Trigger: AATCAGACGCCGTGGTTCCAAAGATCCCCTGGTGAA...CACACAGCATTCACAACCTGAGGACTTCACAAGAGTATTATTTGGTTGGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS TCA 90 bp | TCGTCTGGTTCAGTGTGTATTTGTTGTCTTTTGTCTGAGCCACTATaGTGTGGACACACCCTTGACTCGTCTTCAGTGCAATGGAATACT | + |
|
Preference number: 5 (lower is better) Translates to: SSGSVCICCLLSEPL*CGHTLDSSSVQWNT Trigger: AGTATTCCATTGCACTGAAGACGAGTCAAGGGTGTGTCCACATCATAGTGGCTCAGACAAAAGACAACAAATACACACTGAACCAGACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS-3UTR CAA 90 bp | CTAGAGAGCAGAAGAGACAGCCTCAGACTACAATATTGTTCAAAATGTTTCTGTTTCTGTTATCATCTGTaGTGCATCGTACGGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LESRRDSLRLQYCSKCFCFCYHL*CIVRFH Trigger: ATGGAACCGTACGATGCACAACAGATGATAACAGAA...ACAGAAACATTTTGAACAATATTGTAGTCTGAGGCTGTCTCTTCTGCTCTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS TCA 72 bp | TCCGCTGCTCGCCTTGCTGGCCCCCAGCTCGGCCGCTaGGTTCTTCCGGCCCTTGCCCGGGGTGGGCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: SAARLAGPQLGR*VLPALARGGRR Trigger: GCGGCGCCCACCCCGGGCAAGGGCCGGAAGAACTCAGCGGCCGAGCTGGGGGCCAGCAAGGCGAGCAGCGGA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 72 bp | TGGCCCCCAGCTCGGCCGCTGAGTTCTTCCGGCCCTTaGCCGGGGTGGGCGCCGCGCCGCCAGTCTCCGAGT | + |
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Preference number: 6 (lower is better) Translates to: WPPARPLSSSGP*PGWAPRRQSPS Trigger: ACTCGGAGACTGGCGGCGCGGCGCCCACCCCGGGCAAGGGCCGGAAGAACTCAGCGGCCGAGCTGGGGGCCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 72 bp | GTGCTGCAGCCCGCGCTCTTGGTCACCGCGCCACGGTaGGGCTCCTCCTCGGTGGCGGTGGCGGTGACCCGG | + |
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Preference number: 6 (lower is better) Translates to: VLQPALLVTAPR*GSSSVAVAVTR Trigger: CCGGGTCACCGCCACCGCCACCGAGGAGGAGCCCCACCGTGGCGCGGTGACCAAGAGCGCGGGCTGCAGCAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS TCA 72 bp | GGGGCCCGGGAGCGTCGAGGCCGCGGAGCAGAAGAGTaGGGAGGCCCAGCTGAGACACCGTGGGGCGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GARERRGRGAEE*GGPAETPWGAR Trigger: CCTGGCGCCCCACGGTGTCTCAGCTGGGCCTCCTCACTCTTCTGCTCCGCGGCCTCGACGCTCCCGGGCCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 72 bp | GCTCGGCCGCTGAGTTCTTCCGGCCCTTGCCCGGGGTaGGCGCCGCGCCGCCAGTCTCCGAGTTCTTGCGCG | + |
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Preference number: 6 (lower is better) Translates to: ARPLSSSGPCPG*APRRQSPSSCA Trigger: CGCGCAAGAACTCGGAGACTGGCGGCGCGGCGCCCACCCCGGGCAAGGGCCGGAAGAACTCAGCGGCCGAGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 90 bp | CTGTCCCGGGACAGCCGACTGTCCTTTGGGGGTCCGCTGCTCGCCTaGCTGGCCCCCAGCTCGGCCGCTGAGTTCTTCCGGCCCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LSRDSRLSFGGPLLA*LAPSSAAEFFRPLP Trigger: GGGCAAGGGCCGGAAGAACTCAGCGGCCGAGCTGGGGGCCAGCAAGGCGAGCAGCGGACCCCCAAAGGACAGTCGGCTGTCCCGGGACAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 72 bp | TGTCCCGGGACAGCCGACTGTCCTTTGGGGGTCCGCTaGTCGCCTTGCTGGCCCCCAGCTCGGCCGCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: CPGTADCPLGVR*SPCWPPARPLS Trigger: ACTCAGCGGCCGAGCTGGGGGCCAGCAAGGCGAGCAGCGGACCCCCAAAGGACAGTCGGCTGTCCCGGGACA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 72 bp | GCCGACTGTCCTTTGGGGGTCCGCTGCTCGCCTTGCTaGCCCCCAGCTCGGCCGCTGAGTTCTTCCGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: ADCPLGVRCSPC*PPARPLSSSGP Trigger: AGGGCCGGAAGAACTCAGCGGCCGAGCTGGGGGCCAGCAAGGCGAGCAGCGGACCCCCAAAGGACAGTCGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 72 bp | GACCCTGCAGGCTGTCCCGGGACAGCCGACTGTCCTTaGGGGGTCCGCTGCTCGCCTTGCTGGCCCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: DPAGCPGTADCP*GVRCSPCWPPA Trigger: AGCTGGGGGCCAGCAAGGCGAGCAGCGGACCCCCAAAGGACAGTCGGCTGTCCCGGGACAGCCTGCAGGGTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 72 bp | ACAGCCGACTGTCCTTTGGGGGTCCGCTGCTCGCCTTaGTGGCCCCCAGCTCGGCCGCTGAGTTCTTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: TADCPLGVRCSP*WPPARPLSSSG Trigger: GCCGGAAGAACTCAGCGGCCGAGCTGGGGGCCAGCAAGGCGAGCAGCGGACCCCCAAAGGACAGTCGGCTGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 72 bp | GACAGCCGACTGTCCTTTGGGGGTCCGCTGCTCGCCTaGCTGGCCCCCAGCTCGGCCGCTGAGTTCTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: DSRLSFGGPLLA*LAPSSAAEFFR Trigger: CCGGAAGAACTCAGCGGCCGAGCTGGGGGCCAGCAAGGCGAGCAGCGGACCCCCAAAGGACAGTCGGCTGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 72 bp | GTGGCGGTGGCGGTGACCCGGGAGTTCTTACGGCCTTaGCCAGCAGCGGCCTGGATCAGACCCTGCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VAVAVTREFLRP*PAAAWIRPCRL Trigger: CAGCCTGCAGGGTCTGATCCAGGCCGCTGCTGGCAAAGGCCGTAAGAACTCCCGGGTCACCGCCACCGCCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 72 bp | ACCCGGGAGTTCTTACGGCCTTTGCCAGCAGCGGCCTaGATCAGACCCTGCAGGCTGTCCCGGGACAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: TREFLRPLPAAA*IRPCRLSRDSR Trigger: TCGGCTGTCCCGGGACAGCCTGCAGGGTCTGATCCAGGCCGCTGCTGGCAAAGGCCGTAAGAACTCCCGGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 72 bp | TTACGGCCTTTGCCAGCAGCGGCCTGGATCAGACCCTaGAGGCTGTCCCGGGACAGCCGACTGTCCTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LRPLPAAAWIRP*RLSRDSRLSFG Trigger: CCCAAAGGACAGTCGGCTGTCCCGGGACAGCCTGCAGGGTCTGATCCAGGCCGCTGCTGGCAAAGGCCGTAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 72 bp | GCCACCCTCCGAAGGCTCGTACGGGGTGTCATAGAGTaGTGGCGGCTTCCCCAGCAGGTCCTTGGAGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: ATLRRLVRGVIE*WRLPQQVLGAA Trigger: CGCAGCTCCAAGGACCTGCTGGGGAAGCCGCCACAACTCTATGACACCCCGTACGAGCCTTCGGAGGGTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 90 bp | CACACGTTGGCCACCCTCCGAAGGCTCGTACGGGGTGTCATAGAGTaGTGGCGGCTTCCCCAGCAGGTCCTTGGAGCTGCGTCTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: HTLATLRRLVRGVIE*WRLPQQVLGAASLG Trigger: GCCAAGAGACGCAGCTCCAAGGACCTGCTGGGGAAGCCGCCACAACTCTATGACACCCCGTACGAGCCTTCGGAGGGTGGCCAACGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 72 bp | TCTGACAGGGTCGGCTTCAAGGTCTTCTGCCAGTGGTaGGGTCTCCCTGCATCCTCTCTGCCCGGAGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: SDRVGFKVFCQW*GLPASSLPGGR Trigger: TCGACCTCCGGGCAGAGAGGATGCAGGGAGACCGCACCACTGGCAGAAGACCTTGAAGCCGACCCTGTCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 72 bp | CTGACTCACTGTTCCGGACCAGGTAAGCGGCTTCTTTaGAGGGCTGTAGTCGGCTCTCGGCCTCAGCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: LTHCSGPGKRLL*RAVVGSRPQLG Trigger: GCCGAGCTGAGGCCGAGAGCCGACTACAGCCCTGCAAAGAAGCCGCTTACCTGGTCCGGAACAGTGAGTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 72 bp | TCCCCAGCAGGTCCTTGGAGCTGCGTCTCTTGGCTGTaGCCTCCACCTTCACAGTCTCCCCTGGTTCACTCG | + |
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Preference number: 6 (lower is better) Translates to: SPAGPWSCVSWL*PPPSQSPLVHS Trigger: CGAGTGAACCAGGGGAGACTGTGAAGGTGGAGGCCACAGCCAAGAGACGCAGCTCCAAGGACCTGCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 72 bp | ACCCTCCGAAGGCTCGTACGGGGTGTCATAGAGTTGTaGCGGCTTCCCCAGCAGGTCCTTGGAGCTGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: TLRRLVRGVIEL*RLPQQVLGAAS Trigger: AGACGCAGCTCCAAGGACCTGCTGGGGAAGCCGCCACAACTCTATGACACCCCGTACGAGCCTTCGGAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 72 bp | TGGTCTGACAGGGTCGGCTTCAAGGTCTTCTGCCAGTaGTGCGGTCTCCCTGCATCCTCTCTGCCCGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: WSDRVGFKVFCQ*CGLPASSLPGG Trigger: ACCTCCGGGCAGAGAGGATGCAGGGAGACCGCACCACTGGCAGAAGACCTTGAAGCCGACCCTGTCAGACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 72 bp | AGAGTTGTGGCGGCTTCCCCAGCAGGTCCTTGGAGCTaGGTCTCTTGGCTGTGGCCTCCACCTTCACAGTCT | + |
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Preference number: 6 (lower is better) Translates to: RVVAASPAGPWS*VSWLWPPPSQS Trigger: AGACTGTGAAGGTGGAGGCCACAGCCAAGAGACGCAGCTCCAAGGACCTGCTGGGGAAGCCGCCACAACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 72 bp | GGCCTCAGCTCGGCTGATGGAGCCGTGATACCAAGGTaGTTTTTCCAGGGCCAGGCCTGGGTCCACCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: GLSSADGAVIPR*FFQGQAWVHLL Trigger: GAGAAGGTGGACCCAGGCCTGGCCCTGGAAAAACAACCTTGGTATCACGGCTCCATCAGCCGAGCTGAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 72 bp | TCTTCTGCCAGTGGTGCGGTCTCCCTGCATCCTCTCTaGCCGGAGGTCGATCAGATCCCTCAAACTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: SSASGAVSLHPL*PEVDQIPQTGL Trigger: CAGTCCAGTTTGAGGGATCTGATCGACCTCCGGGCAGAGAGGATGCAGGGAGACCGCACCACTGGCAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 72 bp | ACAGTCTCCCCTGGTTCACTCGGGCCATCAAGCAACTaGAGGGCCTTCACCAGGGGATCTTTGGAACCACGG | + |
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Preference number: 6 (lower is better) Translates to: TVSPGSLGPSSN*RAFTRGSLEPR Trigger: CCGTGGTTCCAAAGATCCCCTGGTGAAGGCCCTCCAGTTGCTTGATGGCCCGAGTGAACCAGGGGAGACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CCA 72 bp | TGTCATAGAGTTGTGGCGGCTTCCCCAGCAGGTCCTTaGAGCTGCGTCTCTTGGCTGTGGCCTCCACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: CHRVVAASPAGP*SCVSWLWPPPS Trigger: TGAAGGTGGAGGCCACAGCCAAGAGACGCAGCTCCAAGGACCTGCTGGGGAAGCCGCCACAACTCTATGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 90 bp | TCCTCTAAAATGATGACCGTGTCTTGCTGTCTCATTATCTTGGCCTaGTCCAGCTCAGGGCCCAGGGAGGACGGGGAAGAGGACGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SSKMMTVSCCLIILA*SSSGPREDGEEDAE Trigger: CTCTGCGTCCTCTTCCCCGTCCTCCCTGGGCCCTGAGCTGGACAAGGCCAAGATAATGAGACAGCAAGACACGGTCATCATTTTAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 72 bp | TCTAAAATGATGACCGTGTCTTGCTGTCTCATTATCTaGGCCTTGTCCAGCTCAGGGCCCAGGGAGGACGGG | + |
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Preference number: 6 (lower is better) Translates to: SKMMTVSCCLII*ALSSSGPREDG Trigger: CCCGTCCTCCCTGGGCCCTGAGCTGGACAAGGCCAAGATAATGAGACAGCAAGACACGGTCATCATTTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 90 bp | TCACTCGGGCCATCAAGCAACTGGAGGGCCTTCACCAGGGGATCTTaGGAACCACGGCGTCTGATTTCTGTTATCATCTGTTGTGCATCG | + |
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Preference number: 6 (lower is better) Translates to: SLGPSSNWRAFTRGS*EPRRLISVIICCAS Trigger: CGATGCACAACAGATGATAACAGAAATCAGACGCCGTGGTTCCAAAGATCCCCTGGTGAAGGCCCTCCAGTTGCTTGATGGCCCGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS TCA 72 bp | GGGCCTTCACCAGGGGATCTTTGGAACCACGGCGTCTaGTTTCTGTTATCATCTGTTGTGCATCGTACGGTT | + |
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Preference number: 6 (lower is better) Translates to: GPSPGDLWNHGV*FLLSSVVHRTV Trigger: AACCGTACGATGCACAACAGATGATAACAGAAATCAGACGCCGTGGTTCCAAAGATCCCCTGGTGAAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 72 bp | GGAACCACGGCGTCTGATTTCTGTTATCATCTGTTGTaGATCGTACGGTTCCATGTAGCCGTCGTTCTCACC | + |
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Preference number: 6 (lower is better) Translates to: GTTASDFCYHLL*IVRFHVAVVLT Trigger: GGTGAGAACGACGGCTACATGGAACCGTACGATGCACAACAGATGATAACAGAAATCAGACGCCGTGGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 72 bp | CACACCCTTGACTCGTCTTCAGTGCAATGGAATACTTaGTGTTCCCTGACTCACTGTTCCGGACCAGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: HTLDSSSVQWNT*CSLTHCSGPGK Trigger: CTTACCTGGTCCGGAACAGTGAGTCAGGGAACAGCAAGTATTCCATTGCACTGAAGACGAGTCAAGGGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 72 bp | CCATCAAGCAACTGGAGGGCCTTCACCAGGGGATCTTaGGAACCACGGCGTCTGATTTCTGTTATCATCTGT | + |
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Preference number: 6 (lower is better) Translates to: PSSNWRAFTRGS*EPRRLISVIIC Trigger: ACAGATGATAACAGAAATCAGACGCCGTGGTTCCAAAGATCCCCTGGTGAAGGCCCTCCAGTTGCTTGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS TCA 72 bp | GCACTGGATGGAGAAGGGTCATGTGCTCTGCTCCTTTaGAAGGCAGCTTTGCATTGGAGTAATAGTGTACCA | + |
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Preference number: 6 (lower is better) Translates to: ALDGEGSCALLL*KAALHWSNSVP Trigger: TGGTACACTATTACTCCAATGCAAAGCTGCCTTTCAAAGGAGCAGAGCACATGACCCTTCTCCATCCAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 72 bp | GCTTTGCATTGGAGTAATAGTGTACCACTTCAGGGATaGTGTCAAACACAGCGCTCGTCTGGTTCAGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: ALHWSNSVPLQG*CQTQRSSGSVC Trigger: ACACACTGAACCAGACGAGCGCTGTGTTTGACAGCATCCCTGAAGTGGTACACTATTACTCCAATGCAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS GCA 72 bp | GAGCTTGTGCACTGGATGGAGAAGGGTCATGTGCTCTaGTCCTTTGAAAGGCAGCTTTGCATTGGAGTAATA | + |
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Preference number: 6 (lower is better) Translates to: ELVHWMEKGHVL*SFERQLCIGVI Trigger: TATTACTCCAATGCAAAGCTGCCTTTCAAAGGAGCAGAGCACATGACCCTTCTCCATCCAGTGCACAAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 72 bp | TTTGGAACCACGGCGTCTGATTTCTGTTATCATCTGTaGTGCATCGTACGGTTCCATGTAGCCGTCGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: FGTTASDFCYHL*CIVRFHVAVVL Trigger: GAGAACGACGGCTACATGGAACCGTACGATGCACAACAGATGATAACAGAAATCAGACGCCGTGGTTCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS CAA 72 bp | GTCTTTTGTCTGAGCCACTATGATGTGGACACACCCTaGACTCGTCTTCAGTGCAATGGAATACTTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: VFCLSHYDVDTP*TRLQCNGILAV Trigger: AACAGCAAGTATTCCATTGCACTGAAGACGAGTCAAGGGTGTGTCCACATCATAGTGGCTCAGACAAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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| CDS TCA 72 bp | TCAGTGTGTATTTGTTGTCTTTTGTCTGAGCCACTATaGTGTGGACACACCCTTGACTCGTCTTCAGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: SVCICCLLSEPL*CGHTLDSSSVQ Trigger: TTGCACTGAAGACGAGTCAAGGGTGTGTCCACATCATAGTGGCTCAGACAAAAGACAACAAATACACACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050401.6 |
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