Pregenerated sensors for SHCBP1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042708Ensembl transcript IDs: ENSMUST00000042373.12, ENSMUST00000136614.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGATGAGTGACAAACGCATTTACAGTGAAATAGAATTCAAAAGATaGCCACACACAGCAGGCAGAAGCCTCCATGCTGTAATTCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: WMSDKRIYSEIEFKR*PHTAGRSLHAVIPA Trigger: TGCTGGAATTACAGCATGGAGGCTTCTGCCTGCTGTGTGTGGCCATCTTTTGAATTCTATTTCACTGTAAATGCGTTTGTCACTCATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR CCA 90 bp | ACTGTTGCTTGGTATCTACAATGTGCCAGGATCATGCCTAGTGACTaGATGAGTGACAAACGCATTTACAGTGAAATAGAATTCAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: TVAWYLQCARIMPSD*MSDKRIYSEIEFKR Trigger: TCTTTTGAATTCTATTTCACTGTAAATGCGTTTGTCACTCATCCAGTCACTAGGCATGATCCTGGCACATTGTAGATACCAAGCAACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTAGAAAGAGGAGCTGTCTGGGCTCAGGTGGTGAAAGCTCTTGTTGCCATGCAGCATTCTGGAGGCTaGAGCAGAGCTAGCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: ILERGAVWAQVVKALVAMQHSGG*SRASLG Trigger: GCCCAGGCTAGCTCTGCTTCAGCCTCCAGAATGCTG...CATGGCAACAAGAGCTTTCACCACCTGAGCCCAGACAGCTCCTCTTTCTAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGCAGAAGCCTCCATGCTGTAATTCCAGCATTCTGGAGGCTGAAGCAGAGATGGCTCAGTGGTCCTaGGTTCAAATGTCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: SRQKPPCCNSSILEAEAEMAQWS*VQMSAT Trigger: GGTTGCTGACATTTGAACTCAGGACCACTGAGCCAT...CTCTGCTTCAGCCTCCAGAATGCTGGAATTACAGCATGGAGGCTTCTGCCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAAAGGGGGTGGAAGCCAACAAGCAGAGGGTGAAATGGATGAGTTGGAAGGACTCTTCTGGTGTGTCTaGAGACAGGAGAAAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VKGGGSQQAEGEMDELEGLFWCV*RQEKGV Trigger: CACACCTTTCTCCTGTCTTCAGACACACCAGAAGAG...TCCTTCCAACTCATCCATTTCACCCTCTGCTTGTTGGCTTCCACCCCCTTTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAAAGGGGGTGGAAGCCAACAAGCAGAGGGTGAAATGGATGAGTTGGAAGGACAGGGTGGACTTCTCTaGCTTTCTCCTCTTACCTTA | + |
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Preference number: 2 (lower is better) Translates to: VKGGGSQQAEGEMDELEGQGGLL*LSPLTL Trigger: TAAGGTAAGAGGAGAAAGTCAGAGAAGTCCACCCTG...TCCTTCCAACTCATCCATTTCACCCTCTGCTTGTTGGCTTCCACCCCCTTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAGCAGAAAGAACAGATTCACTTCAAACAGGAGGAGCCTTCAGCTCACCTCAGGGGCTAGAGAGATaGCTCAGTGGTCCTGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: SKAERTDSLQTGGAFSSPQGLER*LSGPEF Trigger: GAACTCAGGACCACTGAGCCATCTCTCTAGCCCCTG...AGGTGAGCTGAAGGCTCCTCCTGTTTGAAGTGAATCTGTTCTTTCTGCTTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGAAGCCAACAAGCAGAGGGTGAAATGGATGAGTTGGAAGGAATACATCTTGAAGCAGAGCTAGCCTaGGCTGCAAGACTCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GGSQQAEGEMDELEGIHLEAELA*AARLCL Trigger: AAGGCAGAGTCTTGCAGCCCAGGCTAGCTCTGCTTC...AAGATGTATTCCTTCCAACTCATCCATTTCACCCTCTGCTTGTTGGCTTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAAAGGGGGTGGAAGCCAACAAGCAGAGGGTGAAATGGATGAGTTGGAAGGAGACAGGAGAAAGGTGTaGGTACAGTCATTTGGCAAT | + |
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Preference number: 2 (lower is better) Translates to: VKGGGSQQAEGEMDELEGDRRKV*VQSFGN Trigger: ATTGCCAAATGACTGTACCCACACCTTTCTCCTGTC...TCCTTCCAACTCATCCATTTCACCCTCTGCTTGTTGGCTTCCACCCCCTTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAAACTGTTGCTTGGTATCTACAATGTGCCAGGATCATGCCTAGTGACTGGATGGGCTGCAAGACTCTaGCTTAAAAATAACAAAACC | + |
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Preference number: 2 (lower is better) Translates to: QKLLLGIYNVPGSCLVTGWAARL*LKNNKT Trigger: GGTTTTGTTATTTTTAAGGCAGAGTCTTGCAGCCCA...TCCAGTCACTAGGCATGATCCTGGCACATTGTAGATACCAAGCAACAGTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTCTTACCTTATTTTCCTGTCATACACTAGGCTTATCGATTCAACAAAAAAGCAACCATGTGATCTaGTGCCCTCTTCTGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: SPLTLFSCHTLGLSIQQKSNHVI*CPLLVC Trigger: ACACACCAGAAGAGGGCATCAGATCACATGGTTGCT...TTTTTGTTGAATCGATAAGCCTAGTGTATGACAGGAAAATAAGGTAAGAGGAGA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR CAA 90 bp | TTATTTTCCTGTCATACACTAGGCTTATCGATTCAACAAAAACTGTaGCTTGGTATCTACAATGTGCCAGGATCATGCCTAGTGACTGGA | + |
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Preference number: 2 (lower is better) Translates to: LFSCHTLGLSIQQKL*LGIYNVPGSCLVTG Trigger: TCCAGTCACTAGGCATGATCCTGGCACATTGTAGATACCAAGCAACAGTTTTTGTTGAATCGATAAGCCTAGTGTATGACAGGAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR GCA 72 bp | CAAAAGATGGCCACACACAGCAGGCAGAAGCCTCCATaGTGTAATTCCAGCATTCTGGAGGCTGAAGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: QKMATHSRQKPP*CNSSILEAEAE Trigger: CTCTGCTTCAGCCTCCAGAATGCTGGAATTACAGCATGGAGGCTTCTGCCTGCTGTGTGTGGCCATCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR GCA 72 bp | GAGGTACTGGCTTGGGAAGAACTGGTGGTCACACGTTaGCCATGTGAAAAATGCCAATGCCAATGGCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: EVLAWEELVVTR*PCEKCQCQWLC Trigger: GCAAAGCCATTGGCATTGGCATTTTTCACATGGGCAACGTGTGACCACCAGTTCTTCCCAAGCCAGTACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR CCA 72 bp | ATGTGTGACCAGAGGTACTGGCTTGGGAAGAACTGGTaGTCACACGTTGCCCATGTGAAAAATGCCAATGCC | + |
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Preference number: 3 (lower is better) Translates to: MCDQRYWLGKNW*SHVAHVKNANA Trigger: GGCATTGGCATTTTTCACATGGGCAACGTGTGACCACCAGTTCTTCCCAAGCCAGTACCTCTGGTCACACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR CCA 72 bp | GATTCACTTCAAACAGGAGGAGCCTTCAGCTCACCTTaGTCTCTCACACTCTTCTTAGGAGTTGCGTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: DSLQTGGAFSSP*SLTLFLGVAFQ Trigger: CTGGAACGCAACTCCTAAGAAGAGTGTGAGAGACCAAGGTGAGCTGAAGGCTCCTCCTGTTTGAAGTGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR CCA 72 bp | CCTATGTGTGACCAGAGGTACTGGCTTGGGAAGAACTaGTGGTCACACGTTGCCCATGTGAAAAATGCCAAT | + |
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Preference number: 3 (lower is better) Translates to: PMCDQRYWLGKN*WSHVAHVKNAN Trigger: ATTGGCATTTTTCACATGGGCAACGTGTGACCACCAGTTCTTCCCAAGCCAGTACCTCTGGTCACACATAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR CCA 72 bp | CCCTCTTCTGGTGTGTCTGAAGACAGGAGAAAGGTGTaGGTACAGTCATTTGGCAATGTAATGCACTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: PSSGVSEDRRKV*VQSFGNVMHSP Trigger: TGGAGAGTGCATTACATTGCCAAATGACTGTACCCACACCTTTCTCCTGTCTTCAGACACACCAGAAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR-3UTR CAA 90 bp | ATATTAGAAAGAGGAGCTGTCTGGGCTCAGGTGGTGAAAGCTCTTGTTGCCATGAACAAAAACTGTTGCTaGGTATCTACAATGTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: ILERGAVWAQVVKALVAMNKNCC*VSTMCQ Trigger: CTGGCACATTGTAGATACCAAGCAACAGTTTTTGTT...CATGGCAACAAGAGCTTTCACCACCTGAGCCCAGACAGCTCCTCTTTCTAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR CCA 72 bp | ACTACTTTGTTACAAATATTAGAAAGAGGAGCTGTCTaGGCTCAGGTGGTGAAAGCTCTTGTTGCCATGGCA | + |
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Preference number: 3 (lower is better) Translates to: TTLLQILERGAV*AQVVKALVAMA Trigger: TGCCATGGCAACAAGAGCTTTCACCACCTGAGCCCAGACAGCTCCTCTTTCTAATATTTGTAACAAAGTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR CCA 72 bp | TGGTATCTACAATGTGCCAGGATCATGCCTAGTGACTaGATGAGTGACAAACGCATTTACAGTGAAATAGAA | + |
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Preference number: 3 (lower is better) Translates to: WYLQCARIMPSD*MSDKRIYSEIE Trigger: TTCTATTTCACTGTAAATGCGTTTGTCACTCATCCAGTCACTAGGCATGATCCTGGCACATTGTAGATACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| 3UTR CCA 72 bp | TACACTAGGCTTATCGATTCAACAAAAACTGTTGCTTaGTATCTACAATGTGCCAGGATCATGCCTAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: YTRLIDSTKTVA*YLQCARIMPSD Trigger: GTCACTAGGCATGATCCTGGCACATTGTAGATACCAAGCAACAGTTTTTGTTGAATCGATAAGCCTAGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS-3UTR GCA 90 bp | GTGAAAGGGGGTGGAAGCCAACAAGCAGAGGGTGAAATGGATGAGTTGGAAGGAATCGGTGGCAGGGGCTaGGCTTCCTCCTGGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VKGGGSQQAEGEMDELEGIGGRG*ASSWSS Trigger: TGAGGACCAGGAGGAAGCGCAGCCCCTGCCACCGAT...TCCTTCCAACTCATCCATTTCACCCTCTGCTTGTTGGCTTCCACCCCCTTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS-3UTR CCA 90 bp | AGCAAAGCAGAAAGAACAGATTCACTTCAAACAGGAGGAGCCTTCAGCTCACCTGGCTGCGCTTCCTCCTaGTCCTCAGGCACCGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: SKAERTDSLQTGGAFSSPGCASS*SSGTAG Trigger: GCCCGCGGTGCCTGAGGACCAGGAGGAAGCGCAGCC...AGGTGAGCTGAAGGCTCCTCCTGTTTGAAGTGAATCTGTTCTTTCTGCTTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS-3UTR GCA 90 bp | GGTGGAAGCCAACAAGCAGAGGGTGAAATGGATGAGTTGGAAGGAATACATCTTGAGCCACCTTCTCGCTaGGCCACATGCCCCTCATGG | + |
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Preference number: 4 (lower is better) Translates to: GGSQQAEGEMDELEGIHLEPPSR*ATCPSW Trigger: CCATGAGGGGCATGTGGCGCAGCGAGAAGGTGGCTC...AAGATGTATTCCTTCCAACTCATCCATTTCACCCTCTGCTTGTTGGCTTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS-3UTR CCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACGGCTGCGCTTCCTCCTaGTCCTCAGGCACCGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDGCASS*SSGTAG Trigger: GCCCGCGGTGCCTGAGGACCAGGAGGAAGCGCAGCC...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR GCA 90 bp | GAAGACAGGAGAAAGGTGTGGGTACAGTCATTTGGCAATGTAATGCACTCTCCACCTCGGGTACTGGATTaGAGGCAGCACCACAACCTT | + |
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Preference number: 4 (lower is better) Translates to: EDRRKVWVQSFGNVMHSPPRVLD*RQHHNL Trigger: AAGGTTGTGGTGCTGCCTGCAATCCAGTACCCGAGG...TGGAGAGTGCATTACATTGCCAAATGACTGTACCCACACCTTTCTCCTGTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS-3UTR GCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACATCGGTGGCAGGGGCTaGGCTTCCTCCTGGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDIGGRG*ASSWSS Trigger: TGAGGACCAGGAGGAAGCGCAGCCCCTGCCACCGAT...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR TCA 90 bp | GGTGGAAGCCAACAAGCAGAGGGTGAAATGGATGAGTTGGAAGGAATACATCTTGGAAAGAAAGGTCCATaGACTCTTAGCCGCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: GGSQQAEGEMDELEGIHLGKKGP*TLSRKS Trigger: AGACTTGCGGCTAAGAGTTCATGGACCTTTCTTTCC...AAGATGTATTCCTTCCAACTCATCCATTTCACCCTCTGCTTGTTGGCTTCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS-3UTR GCA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGAGCCACCTTCTCGCTaGGCCACATGCCCCTCATGG | + |
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Preference number: 4 (lower is better) Translates to: QESFITFLNYKTRTNTYPEPPSR*ATCPSW Trigger: CCATGAGGGGCATGTGGCGCAGCGAGAAGGTGGCTC...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR TCA 90 bp | CTTCTTAGGAGTTGCGTTCCAGCCAGGGTGGACTTCTCTGACTTTCTCCTCTTACAGAAACTGTCACTTTaGAACAAGACGACAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLRSCVPARVDFSDFLLLQKLSL*NKTTSS Trigger: AGAACTTGTCGTCTTGTTTCAAAGTGACAGTTTCTG...TAAGAGGAGAAAGTCAGAGAAGTCCACCCTGGCTGGAACGCAACTCCTAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS-3UTR TCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACTCAGTGAAGCCCCTGTaGGAACGCACACTCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDSVKPL*ERTLLS Trigger: GGACAGGAGTGTGCGTTCTCACAGGGGCTTCACTGA...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CCA 90 bp | AGCAAAGCAGAAAGAACAGATTCACTTCAAACAGGAGGAGCCTTCAGCTCACCTTCCTTGATGTTGCTCTaGTACTCGATGAGCTCAACT | + |
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Preference number: 4 (lower is better) Translates to: SKAERTDSLQTGGAFSSPSLMLL*YSMSST Trigger: AGTTGAGCTCATCGAGTACCAGAGCAACATCAAGGA...AGGTGAGCTGAAGGCTCCTCCTGTTTGAAGTGAATCTGTTCTTTCTGCTTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS-3UTR GCA 90 bp | CAAAAACTGTTGCTTGGTATCTACAATGTGCCAGGATCATGCCTAGTGACTGGAGTCCCGAGGGATATTTaGAATGTTAGAAGAAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: QKLLLGIYNVPGSCLVTGVPRDI*NVRRKG Trigger: CCCTTTTCTTCTAACATTGCAAATATCCCTCGGGAC...TCCAGTCACTAGGCATGATCCTGGCACATTGTAGATACCAAGCAACAGTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS-3UTR TCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACGGAAAGAAAGGTCCATaGACTCTTAGCCGCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDGKKGP*TLSRKS Trigger: AGACTTGCGGCTAAGAGTTCATGGACCTTTCTTTCC...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR GCA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAACTCATAGCTTCCTCTaGATCTTCTGCCTTCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: QESFITFLNYKTRTNTYPTHSFL*IFCLRA Trigger: GGCTCGAAGGCAGAAGATGCAGAGGAAGCTATGAGT...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR TCA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCACAACAAAGCGAGGTTTaGAGCTTGATATTCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: QESFITFLNYKTRTNTYPQQSEV*SLIFSR Trigger: CCGGGAGAATATCAAGCTTCAAACCTCGCTTTGTTG...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR GCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACAGGTCATTATGCTGCTaGAGAAGTGTGTCAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDRSLCC*RSVSED Trigger: GTCTTCTGACACACTTCTGCAGCAGCATAATGACCT...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR GCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACAGGTTCAGGTCATTATaGTGCTGCAGAAGTGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDRFRSL*CCRSVS Trigger: TGACACACTTCTGCAGCAGCATAATGACCTGAACCT...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR GCA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCACCGATGGCTGAAGAATaGTCACTCCATAGCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: QESFITFLNYKTRTNTYPPMAEE*SLHSHC Trigger: ACAATGGCTATGGAGTGAGCATTCTTCAGCCATCGG...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACCATTCCCTTCCAAAATaGCTATGCTCCCAGGATACA | + |
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Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDHSLPK*LCSQDT Trigger: TGTATCCTGGGAGCATAGCCATTTTGGAAGGGAATG...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| 3UTR CAA 72 bp | TGTCATACACTAGGCTTATCGATTCAACAAAAACTGTaGCTTGGTATCTACAATGTGCCAGGATCATGCCTA | + |
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Preference number: 4 (lower is better) Translates to: CHTLGLSIQQKL*LGIYNVPGSCL Trigger: TAGGCATGATCCTGGCACATTGTAGATACCAAGCAACAGTTTTTGTTGAATCGATAAGCCTAGTGTATGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS-3UTR GCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACGTCCCGAGGGATATTTaGAATGTTAGAAGAAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDVPRDI*NVRRKG Trigger: CCCTTTTCTTCTAACATTGCAAATATCCCTCGGGAC...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR GCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACCTTCCAAAATGGCTATaGTCCCAGGATACAGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDLPKWL*SQDTVQ Trigger: TTGAACTGTATCCTGGGAGCATAGCCATTTTGGAAG...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR GCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACCATCTTCAGTTTGGGTaGTGGAAGAACCTTCATGTT | + |
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Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDHLQFG*WKNLHV Trigger: AACATGAAGGTTCTTCCAGCACCCAAACTGAAGATG...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CCA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCATCCTTGATGTTGCTCTaGTACTCGATGAGCTCAACT | + |
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Preference number: 4 (lower is better) Translates to: QESFITFLNYKTRTNTYPSLMLL*YSMSST Trigger: AGTTGAGCTCATCGAGTACCAGAGCAACATCAAGGA...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACCTTCAGTTTGGGTGCTaGAAGAACCTTCATGTTAAC | + |
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Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDLQFGC*KNLHVN Trigger: GTTAACATGAAGGTTCTTCCAGCACCCAAACTGAAG...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR TCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACCAGAAACTGTCACTTTaGAACAAGACGACAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDQKLSL*NKTTSS Trigger: AGAACTTGTCGTCTTGTTTCAAAGTGACAGTTTCTG...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR TCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACATTCTCCCGGGAAAATaGCTACTATATCTCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDILPGK*LLYLHY Trigger: ATAGTGGAGATATAGTAGTCATTTTCCCGGGAGAAT...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR TCA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAAGCTGTCACTGGTTCTaGGGTTATTACAGTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: QESFITFLNYKTRTNTYPSCHWF*GYYSDE Trigger: TTCATCACTGTAATAACCTCAGAACCAGTGACAGCT...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR TCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACCATTCAGAGTTTGCATaGCTTTGGAGAGCATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDHSEFA*LWRAFC Trigger: ACAAAATGCTCTCCAAAGTCATGCAAACTCTGAATG...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR GCA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACCCCTTTGTTGAGAGCTaGTTCTGCTACAATAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESFITFLNYKTRTNTYPDPFVES*FCYNKE Trigger: TTCTTTATTGTAGCAGAAGCAGCTCTCAACAAAGGG...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR GCA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAACCACAAAACTGTCATaGGAAGGTTCAGAAGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: QESFITFLNYKTRTNTYPTTKLS*EGSEVI Trigger: GATTACTTCTGAACCTTCGCATGACAGTTTTGTGGT...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR GCA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCATCCACATTCAGAGTTTaGATGACTTTGGAGAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QESFITFLNYKTRTNTYPSTFRV*MTLESI Trigger: AATGCTCTCCAAAGTCATGCAAACTCTGAATGTGGA...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS GCA 90 bp | ACATGTTTCGGCTTGGGTGACCGGTGGGAGCTGGAGCCGTCGCCGTaGCGCCTTGCCCTTCACGGGGCGCGGGGAGGCCACTACCGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TCFGLGDRWELEPSP*RLALHGARGGHYRA Trigger: CGCTCGGTAGTGGCCTCCCCGCGCCCCGTGAAGGGCAAGGCGGCACGGCGACGGCTCCAGCTCCCACCGGTCACCCAAGCCGAAACATGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
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| CDS GCA 90 bp | GTAGCACCTGGTCGCAGTACAGAGCCACCTTCTCGCTGCGCCACATaGCCCTCATGGGGGATGCGTAGATCGGTGGCAGGGGCTGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VAPGRSTEPPSRCAT*PSWGMRRSVAGAAL Trigger: AAGCGCAGCCCCTGCCACCGATCTACGCATCCCCCATGAGGGGCATGTGGCGCAGCGAGAAGGTGGCTCTGTACTGCGACCAGGTGCTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
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| CDS TCA 90 bp | CTCTTCCCTTTTCTACGTCTCAGAATCCTCGGAAAGAAAGGTCCATaGACTCTTAGCCGCAAGTCTTCCCACATCTTCAGCAGCCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFPFLRLRILGKKGP*TLSRKSSHIFSSPQ Trigger: CTGCGGGCTGCTGAAGATGTGGGAAGACTTGCGGCTAAGAGTTCATGGACCTTTCTTTCCGAGGATTCTGAGACGTAGAAAAGGGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
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| CDS CCA 90 bp | GGCTCAGCCACAGAAACTGTCACTTTGAAACAAGACGACAAGTTCTaGCGGGGTTTACACGTTACCTCGACCAGGATCCCAACAAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSATETVTLKQDDKF*RGLHVTSTRIPTKG Trigger: CCCTTTTGTTGGGATCCTGGTCGAGGTAACGTGTAAACCCCGCCAGAACTTGTCGTCTTGTTTCAAAGTGACAGTTTCTGTGGCTGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
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| CDS CCA 90 bp | TCCAAAATGGCTATGCTCCCAGGATACAGTTCAACACCAGCACCCTaGGCACCAGTTATCTCACTGTTTGTGATCGTCAGTGAAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SKMAMLPGYSSTPAP*APVISLFVIVSEAP Trigger: AGGGGCTTCACTGACGATCACAAACAGTGAGATAACTGGTGCCCAGGGTGCTGGTGTTGAACTGTATCCTGGGAGCATAGCCATTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS GCA 90 bp | TTCCAGCTCGCCCAGAACCTCGTCCACCAAGTCCCGAGGGATATTTaGAATGTTAGAAGAAAAGGGCTCAGCCACAGAAACTGTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: FQLAQNLVHQVPRDI*NVRRKGLSHRNCHF Trigger: AAAGTGACAGTTTCTGTGGCTGAGCCCTTTTCTTCTAACATTGCAAATATCCCTCGGGACTTGGTGGACGAGGTTCTGGGCGAGCTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
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| CDS TCA 90 bp | ACTCCTGTCCCTTCACACTTTAGCAAGCAGTTTTCAAGAGTCAGGTaGCCAGACTCTACCACCACAATGCCATCAACTGTCCCTTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TPVPSHFSKQFSRVR*PDSTTTMPSTVPCC Trigger: ACAACAAGGGACAGTTGATGGCATTGTGGTGGTAGAGTCTGGTCACCTGACTCTTGAAAACTGCTTGCTAAAGTGTGAAGGGACAGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CCA 90 bp | CAGAAGGACTTTTCCATGTCGGTGGTCATCACTTTGGCTACGATGTaGGTTATAGTCTTCCCAAAGTCTCTCTTCCCTTTTCTACGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QKDFSMSVVITLATM*VIVFPKSLFPFLRL Trigger: GAGACGTAGAAAAGGGAAGAGAGACTTTGGGAAGACTATAACCCACATCGTAGCCAAAGTGATGACCACCGACATGGAAAAGTCCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS-3UTR CAA 90 bp | GTGAAAGGGGGTGGAAGCCAACAAGCAGAGGGTGAAATGGATGAGTTGGAAGGAACAGAAACTGTCACTTaGAAACAAGACGACAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VKGGGSQQAEGEMDELEGTETVT*KQDDKF Trigger: GAACTTGTCGTCTTGTTTCAAAGTGACAGTTTCTGT...TCCTTCCAACTCATCCATTTCACCCTCTGCTTGTTGGCTTCCACCCCCTTTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS CCA 90 bp | GACAAGTTCTTTACCATGTCGGTGGTCATCACTTTGGCTACGATGTaGGTTATAGTCTTCCCAAAGTCTCTCTTCCCTTTTCTACGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DKFFTMSVVITLATM*VIVFPKSLFPFLRL Trigger: GAGACGTAGAAAAGGGAAGAGAGACTTTGGGAAGACTATAACCCACATCGTAGCCAAAGTGATGACCACCGACATGGTAAAGAACTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS GCA 90 bp | GCAAGCAGTTTTCAAGAGTCAGGTGACCAGACTCTACCACCACAATaGCATCAACTGTCCCTTGTTGTATCAAAGAAAGCTGCATTAATT | + |
|
Preference number: 5 (lower is better) Translates to: ASSFQESGDQTLPPQ*HQLSLVVSKKAALI Trigger: AATTAATGCAGCTTTCTTTGATACAACAAGGGACAGTTGATGGCATTGTGGTGGTAGAGTCTGGTCACCTGACTCTTGAAAACTGCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CCA 90 bp | CCCTTTGTTGAGAGCTGCTTCTGCTACAATAAAGAACTGTTCCGATaGCTGAAGAATGCTCACTCCATAGCCATTGTTGTTGTAGATATG | + |
|
Preference number: 5 (lower is better) Translates to: PFVESCFCYNKELFR*LKNAHSIAIVVVDM Trigger: CATATCTACAACAACAATGGCTATGGAGTGAGCATTCTTCAGCCATCGGAACAGTTCTTTATTGTAGCAGAAGCAGCTCTCAACAAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGAAGCAGCCCCTTTGTaGAGAGCTGCTTCTGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: QESFITFLNYKTRTNTYPEAAPL*RAASAT Trigger: TGTAGCAGAAGCAGCTCTCAACAAAGGGGCTGCTTC...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS TCA 90 bp | TCCAACTCCCTTTATAGTGATGTCATCAGTCAACAAAGCGAGGTTTaGAGCTTGATATTCTCCCGGGAAAATGACTACTATATCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SNSLYSDVISQQSEV*SLIFSRENDYYIST Trigger: AGTGGAGATATAGTAGTCATTTTCCCGGGAGAATATCAAGCTTCAAACCTCGCTTTGTTGACTGATGACATCACTATAAAGGGAGTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS TCA 90 bp | AGTTTGCATGACTTTGGAGAGCATTTTGTCATCTTTCTTATCTCCTaGAGCAGCCCCTTTGTTGAGAGCTGCTTCTGCTACAATAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLHDFGEHFVIFLIS*SSPFVESCFCYNKE Trigger: TTCTTTATTGTAGCAGAAGCAGCTCTCAACAAAGGGGCTGCTTCAGGAGATAAGAAAGATGACAAAATGCTCTCCAAAGTCATGCAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACTTCGTCATCTTCAGTTaGGGTGCTGGAAGAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESFITFLNYKTRTNTYPDFVIFS*GAGRTF Trigger: GAAGGTTCTTCCAGCACCCAAACTGAAGATGACGAA...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACTCAACAAAGCGAGGTTaGAAGCTTGATATTCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ESFITFLNYKTRTNTYPDSTKRG*KLDILP Trigger: CGGGAGAATATCAAGCTTCAAACCTCGCTTTGTTGA...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGCCATCAACTGTCCCTaGTTGTATCAAAGAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QESFITFLNYKTRTNTYPAINCP*LYQRKL Trigger: CAGCTTTCTTTGATACAACAAGGGACAGTTGATGGC...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACTTCCACATTCAGAGTTaGCATGACTTTGGAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ESFITFLNYKTRTNTYPDFHIQS*HDFGEH Trigger: ATGCTCTCCAAAGTCATGCAAACTCTGAATGTGGAA...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACACAGAAACTGTCACTTaGAAACAAGACGACAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESFITFLNYKTRTNTYPDTETVT*KQDDKF Trigger: GAACTTGTCGTCTTGTTTCAAAGTGACAGTTTCTGT...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACATCAACTGTCCCTTGTaGTATCAAAGAAAGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ESFITFLNYKTRTNTYPDINCPL*YQRKLH Trigger: ATGCAGCTTTCTTTGATACAACAAGGGACAGTTGAT...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACGCTTCTATCCTGTTGTaGTTCATTTCCACATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESFITFLNYKTRTNTYPDASILL*FISTFR Trigger: TCTGAATGTGGAAATGAACAACAACAGGATAGAAGC...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | GAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAGACTTGGCTTCTATCCTGTaGTTGTTCATTTCCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: ESFITFLNYKTRTNTYPDLASIL*LFISTF Trigger: GAATGTGGAAATGAACAACAACAGGATAGAAGCCAA...GTCTGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAATATCCCCCTTTAAGTaGGCTTCTATCCTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QESFITFLNYKTRTNTYPISPFK*ASILLL Trigger: CAACAACAGGATAGAAGCCAACTTAAAGGGGGATAT...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAAGAGTTTGCATGACTTaGGAGAGCATTTTGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QESFITFLNYKTRTNTYPRVCMT*ESILSS Trigger: AGATGACAAAATGCTCTCCAAAGTCATGCAAACTCT...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCATTCACATTATCAGCTTaGGATACCACAAAACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QESFITFLNYKTRTNTYPFTLSA*DTTKLS Trigger: TGACAGTTTTGTGGTATCCAAAGCTGATAATGTGAA...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS-3UTR CAA 90 bp | CAAGAATCATTTATCACATTCCTGAACTATAAAACACGAACGAACACCTATCCAACTTTGGAGAGCATTTaGTCATCTTTCTTATCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QESFITFLNYKTRTNTYPTLESI*SSFLSP Trigger: AGGAGATAAGAAAGATGACAAAATGCTCTCCAAAGT...TGGATAGGTGTTCGTTCGTGTTTTATAGTTCAGGAATGTGATAAATGATTCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 90 bp | TCGGCTTGGGTGACCGGTGGGAGCTGGAGCCGTCGCCGTGCCGCCTaGCCCTTCACGGGGCGCGGGGAGGCCACTACCGAGCGCACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAWVTGGSWSRRRAA*PFTGRGEATTERTG Trigger: CCCCGTGCGCTCGGTAGTGGCCTCCCCGCGCCCCGTGAAGGGCAAGGCGGCACGGCGACGGCTCCAGCTCCCACCGGTCACCCAAGCCGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
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| CDS GCA 72 bp | GGCTTGGGTGACCGGTGGGAGCTGGAGCCGTCGCCGTaGCGCCTTGCCCTTCACGGGGCGCGGGGAGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLGDRWELEPSP*RLALHGARGGH Trigger: GTGGCCTCCCCGCGCCCCGTGAAGGGCAAGGCGGCACGGCGACGGCTCCAGCTCCCACCGGTCACCCAAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
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| CDS CAA 72 bp | GTGACCGGTGGGAGCTGGAGCCGTCGCCGTGCCGCCTaGCCCTTCACGGGGCGCGGGGAGGCCACTACCGAG | + |
|
Preference number: 6 (lower is better) Translates to: VTGGSWSRRRAA*PFTGRGEATTE Trigger: CTCGGTAGTGGCCTCCCCGCGCCCCGTGAAGGGCAAGGCGGCACGGCGACGGCTCCAGCTCCCACCGGTCAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
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| CDS GCA 72 bp | TCACCATCCTCCTCTCCACTCCCTCGGGTACTGGATTaGAGGCAGCACCACAACCTTCAGCCCAGAAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: SPSSSPLPRVLD*RQHHNLQPRRT Trigger: AGTCCTTCTGGGCTGAAGGTTGTGGTGCTGCCTGCAATCCAGTACCCGAGGGAGTGGAGAGGAGGATGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS TCA 72 bp | CTGGGCACCAGTTATCTCACTGTTTGTGATCGTCAGTaGAGCCCCTGTGAGAACGCACACTCCTGTCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGTSYLTVCDRQ*SPCENAHSCPF Trigger: GAAGGGACAGGAGTGTGCGTTCTCACAGGGGCTTCACTGACGATCACAAACAGTGAGATAACTGGTGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CCA 72 bp | AAGCGCTGCGCGATGGGGCCGGGGATTGTCCCGTCCTaGATGTCGCACCACAGATTAATTCTTTCTTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: KRCAMGPGIVPS*MSHHRLILSSI Trigger: TATTGAAGAAAGAATTAATCTGTGGTGCGACATCCAGGACGGGACAATCCCCGGCCCCATCGCGCAGCGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
||
| CDS GCA 72 bp | GCCCAGAACCTCGTCCACCAAGTCCCGAGGGATATTTaGAATGTTAGAAGAAAAGGGCTCAGCCACAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: AQNLVHQVPRDI*NVRRKGLSHRN Trigger: GTTTCTGTGGCTGAGCCCTTTTCTTCTAACATTGCAAATATCCCTCGGGACTTGGTGGACGAGGTTCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
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| CDS CCA 72 bp | GCTATGCTCCCAGGATACAGTTCAACACCAGCACCCTaGGCACCAGTTATCTCACTGTTTGTGATCGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AMLPGYSSTPAP*APVISLFVIVS Trigger: ACTGACGATCACAAACAGTGAGATAACTGGTGCCCAGGGTGCTGGTGTTGAACTGTATCCTGGGAGCATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 90 bp | GGGTCTTCCTTGATGTTGCTCTGGTACTCGATGAGCTCAACTCGCTaGTTTTTGTACTTCTCGAGCGTTTTCTTGAAGCGCTGCGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: GSSLMLLWYSMSSTR*FLYFSSVFLKRCAM Trigger: CATCGCGCAGCGCTTCAAGAAAACGCTCGAGAAGTACAAAAACAAGCGAGTTGAGCTCATCGAGTACCAGAGCAACATCAAGGAAGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
||
| CDS CAA 90 bp | CAACCTTCAGCCCAGAAGGACTTTTCCATGTCGGTGGTCATCACTTaGGCTACGATGTGGGTTATAGTCTTCCCAAAGTCTCTCTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: QPSAQKDFSMSVVIT*ATMWVIVFPKSLFP Trigger: AGGGAAGAGAGACTTTGGGAAGACTATAACCCACATCGTAGCCAAAGTGATGACCACCGACATGGAAAAGTCCTTCTGGGCTGAAGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS TCA 72 bp | TTTCTACGTCTCAGAATCCTCGGAAAGAAAGGTCCATaGACTCTTAGCCGCAAGTCTTCCCACATCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLRLRILGKKGP*TLSRKSSHIFS Trigger: GCTGAAGATGTGGGAAGACTTGCGGCTAAGAGTTCATGGACCTTTCTTTCCGAGGATTCTGAGACGTAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
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| CDS TCA 72 bp | CCTTCACACTTTAGCAAGCAGTTTTCAAGAGTCAGGTaGCCAGACTCTACCACCACAATGCCATCAACTGTC | + |
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Preference number: 6 (lower is better) Translates to: PSHFSKQFSRVR*PDSTTTMPSTV Trigger: GACAGTTGATGGCATTGTGGTGGTAGAGTCTGGTCACCTGACTCTTGAAAACTGCTTGCTAAAGTGTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 90 bp | TTTGCAATGTTAGAAGAAAAGGGCTCAGCCACAGAAACTGTCACTTaGAAACAAGACGACAAGTTCTGGCGGGGTTTACACGTTACCTCG | + |
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Preference number: 6 (lower is better) Translates to: FAMLEEKGSATETVT*KQDDKFWRGLHVTS Trigger: CGAGGTAACGTGTAAACCCCGCCAGAACTTGTCGTCTTGTTTCAAAGTGACAGTTTCTGTGGCTGAGCCCTTTTCTTCTAACATTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
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| CDS CAA 90 bp | AGTGTGTCAGAAGACAAGTTCTTTACCATGTCGGTGGTCATCACTTaGGCTACGATGTGGGTTATAGTCTTCCCAAAGTCTCTCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SVSEDKFFTMSVVIT*ATMWVIVFPKSLFP Trigger: AGGGAAGAGAGACTTTGGGAAGACTATAACCCACATCGTAGCCAAAGTGATGACCACCGACATGGTAAAGAACTTGTCTTCTGACACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS TCA 72 bp | CACCACCTAAGGTGCTCTTTGAGCTGTCACTGGTTCTaGGGTTATTACAGTGATGAATCTCATTCCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: HHLRCSLSCHWF*GYYSDESHSLP Trigger: TGGAAGGGAATGAGATTCATCACTGTAATAACCTCAGAACCAGTGACAGCTCAAAGAGCACCTTAGGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS TCA 72 bp | GACTTTGGAGAGCATTTTGTCATCTTTCTTATCTCCTaGAGCAGCCCCTTTGTTGAGAGCTGCTTCTGCTAC | + |
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Preference number: 6 (lower is better) Translates to: DFGEHFVIFLIS*SSPFVESCFCY Trigger: GTAGCAGAAGCAGCTCTCAACAAAGGGGCTGCTTCAGGAGATAAGAAAGATGACAAAATGCTCTCCAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 72 bp | TTAGAAGAAAAGGGCTCAGCCACAGAAACTGTCACTTaGAAACAAGACGACAAGTTCTGGCGGGGTTTACAC | + |
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Preference number: 6 (lower is better) Translates to: LEEKGSATETVT*KQDDKFWRGLH Trigger: GTGTAAACCCCGCCAGAACTTGTCGTCTTGTTTCAAAGTGACAGTTTCTGTGGCTGAGCCCTTTTCTTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042373.12 ENSMUST00000136614.2 |
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| CDS CAA 90 bp | TTGGAGAGCATTTTGTCATCTTTCTTATCTCCTGAAGCAGCCCCTTaGTTGAGAGCTGCTTCTGCTACAATAAAGAACTGTTCCGATGGC | + |
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Preference number: 6 (lower is better) Translates to: LESILSSFLSPEAAP*LRAASATIKNCSDG Trigger: GCCATCGGAACAGTTCTTTATTGTAGCAGAAGCAGCTCTCAACAAAGGGGCTGCTTCAGGAGATAAGAAAGATGACAAAATGCTCTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS GCA 72 bp | TTTCAAGAGTCAGGTGACCAGACTCTACCACCACAATaGCATCAACTGTCCCTTGTTGTATCAAAGAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: FQESGDQTLPPQ*HQLSLVVSKKA Trigger: AGCTTTCTTTGATACAACAAGGGACAGTTGATGGCATTGTGGTGGTAGAGTCTGGTCACCTGACTCTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CCA 72 bp | TTTACCATGTCGGTGGTCATCACTTTGGCTACGATGTaGGTTATAGTCTTCCCAAAGTCTCTCTTCCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: FTMSVVITLATM*VIVFPKSLFPF Trigger: AAAAGGGAAGAGAGACTTTGGGAAGACTATAACCCACATCGTAGCCAAAGTGATGACCACCGACATGGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CCA 72 bp | GGTTATTACAGTGATGAATCTCATTCCCTTCCAAAATaGCTATGCTCCCAGGATACAGTTCAACACCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: GYYSDESHSLPK*LCSQDTVQHQH Trigger: GTGCTGGTGTTGAACTGTATCCTGGGAGCATAGCCATTTTGGAAGGGAATGAGATTCATCACTGTAATAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CCA 72 bp | GAGAGCTGCTTCTGCTACAATAAAGAACTGTTCCGATaGCTGAAGAATGCTCACTCCATAGCCATTGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: ESCFCYNKELFR*LKNAHSIAIVV Trigger: AACAACAATGGCTATGGAGTGAGCATTCTTCAGCCATCGGAACAGTTCTTTATTGTAGCAGAAGCAGCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CCA 72 bp | TTTTCCATGTCGGTGGTCATCACTTTGGCTACGATGTaGGTTATAGTCTTCCCAAAGTCTCTCTTCCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: FSMSVVITLATM*VIVFPKSLFPF Trigger: AAAAGGGAAGAGAGACTTTGGGAAGACTATAACCCACATCGTAGCCAAAGTGATGACCACCGACATGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136614.2 |
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| CDS CAA 90 bp | CCGGTGACTATCCTAATATCCCCCTTTAAGTTGGCTTCTATCCTGTaGTTGTTCATTTCCACATTCAGAGTTTGCATGACTTTGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PVTILISPFKLASIL*LFISTFRVCMTLES Trigger: GCTCTCCAAAGTCATGCAAACTCTGAATGTGGAAATGAACAACAACAGGATAGAAGCCAACTTAAAGGGGGATATTAGGATAGTCACCGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS TCA 72 bp | AAGCGAGGTTTGAAGCTTGATATTCTCCCGGGAAAATaGCTACTATATCTCCACTATAGCAGCTGTCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: KRGLKLDILPGK*LLYLHYSSCPK Trigger: CTTTGGACAGCTGCTATAGTGGAGATATAGTAGTCATTTTCCCGGGAGAATATCAAGCTTCAAACCTCGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 72 bp | TTGTCATCTTTCTTATCTCCTGAAGCAGCCCCTTTGTaGAGAGCTGCTTCTGCTACAATAAAGAACTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSSFLSPEAAPL*RAASATIKNCS Trigger: GGAACAGTTCTTTATTGTAGCAGAAGCAGCTCTCAACAAAGGGGCTGCTTCAGGAGATAAGAAAGATGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS TCA 72 bp | GTGATGTCATCAGTCAACAAAGCGAGGTTTGAAGCTTaGTATTCTCCCGGGAAAATGACTACTATATCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VMSSVNKARFEA*YSPGKMTTISP Trigger: TGGAGATATAGTAGTCATTTTCCCGGGAGAATATCAAGCTTCAAACCTCGCTTTGTTGACTGATGACATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 90 bp | TTGTTCATTTCCACATTCAGAGTTTGCATGACTTTGGAGAGCATTTaGTCATCTTTCTTATCTCCTGAAGCAGCCCCTTTGTTGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LFISTFRVCMTLESI*SSFLSPEAAPLLRA Trigger: AGCTCTCAACAAAGGGGCTGCTTCAGGAGATAAGAAAGATGACAAAATGCTCTCCAAAGTCATGCAAACTCTGAATGTGGAAATGAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 90 bp | TCTATCCTGTTGTTGTTCATTTCCACATTCAGAGTTTGCATGACTTaGGAGAGCATTTTGTCATCTTTCTTATCTCCTGAAGCAGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: SILLLFISTFRVCMT*ESILSSFLSPEAAP Trigger: AGGGGCTGCTTCAGGAGATAAGAAAGATGACAAAATGCTCTCCAAAGTCATGCAAACTCTGAATGTGGAAATGAACAACAACAGGATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 90 bp | GTGACTATCCTAATATCCCCCTTTAAGTTGGCTTCTATCCTGTTGTaGTTCATTTCCACATTCAGAGTTTGCATGACTTTGGAGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: VTILISPFKLASILL*FISTFRVCMTLESI Trigger: AATGCTCTCCAAAGTCATGCAAACTCTGAATGTGGAAATGAACAACAACAGGATAGAAGCCAACTTAAAGGGGGATATTAGGATAGTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 72 bp | ATTTTGTCATCTTTCTTATCTCCTGAAGCAGCCCCTTaGTTGAGAGCTGCTTCTGCTACAATAAAGAACTGT | + |
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Preference number: 6 (lower is better) Translates to: ILSSFLSPEAAP*LRAASATIKNC Trigger: ACAGTTCTTTATTGTAGCAGAAGCAGCTCTCAACAAAGGGGCTGCTTCAGGAGATAAGAAAGATGACAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS TCA 72 bp | CTTTATAGTGATGTCATCAGTCAACAAAGCGAGGTTTaGAGCTTGATATTCTCCCGGGAAAATGACTACTAT | + |
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Preference number: 6 (lower is better) Translates to: LYSDVISQQSEV*SLIFSRENDYY Trigger: ATAGTAGTCATTTTCCCGGGAGAATATCAAGCTTCAAACCTCGCTTTGTTGACTGATGACATCACTATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 72 bp | CTAATATCCCCCTTTAAGTTGGCTTCTATCCTGTTGTaGTTCATTTCCACATTCAGAGTTTGCATGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: LISPFKLASILL*FISTFRVCMTL Trigger: CAAAGTCATGCAAACTCTGAATGTGGAAATGAACAACAACAGGATAGAAGCCAACTTAAAGGGGGATATTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 72 bp | ATCCTAATATCCCCCTTTAAGTTGGCTTCTATCCTGTaGTTGTTCATTTCCACATTCAGAGTTTGCATGACT | + |
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Preference number: 6 (lower is better) Translates to: ILISPFKLASIL*LFISTFRVCMT Trigger: AGTCATGCAAACTCTGAATGTGGAAATGAACAACAACAGGATAGAAGCCAACTTAAAGGGGGATATTAGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS TCA 72 bp | TCCTGTTGTTGTTCATTTCCACATTCAGAGTTTGCATaGCTTTGGAGAGCATTTTGTCATCTTTCTTATCTC | + |
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Preference number: 6 (lower is better) Translates to: SCCCSFPHSEFA*LWRAFCHLSYL Trigger: GAGATAAGAAAGATGACAAAATGCTCTCCAAAGTCATGCAAACTCTGAATGTGGAAATGAACAACAACAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 90 bp | CCTTGTTGTATCAAAGAAAGCTGCATTAATTTCACATTATCAGCTTaGGATACCACAAAACTGTCATGCGAAGGTTCAGAAGTAATCATA | + |
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Preference number: 6 (lower is better) Translates to: PCCIKESCINFTLSA*DTTKLSCEGSEVII Trigger: TATGATTACTTCTGAACCTTCGCATGACAGTTTTGTGGTATCCAAAGCTGATAATGTGAAATTAATGCAGCTTTCTTTGATACAACAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS GCA 72 bp | TCTATCCTGTTGTTGTTCATTTCCACATTCAGAGTTTaGATGACTTTGGAGAGCATTTTGTCATCTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: SILLLFISTFRV*MTLESILSSFL Trigger: TAAGAAAGATGACAAAATGCTCTCCAAAGTCATGCAAACTCTGAATGTGGAAATGAACAACAACAGGATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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| CDS CAA 72 bp | ATCAAAGAAAGCTGCATTAATTTCACATTATCAGCTTaGGATACCACAAAACTGTCATGCGAAGGTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: IKESCINFTLSA*DTTKLSCEGSE Trigger: TTCTGAACCTTCGCATGACAGTTTTGTGGTATCCAAAGCTGATAATGTGAAATTAATGCAGCTTTCTTTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042373.12 |
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