Pregenerated sensors for SHC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035109Ensembl transcript IDs: ENSMUST00000042246.14, ENSMUST00000110477.2, ENSMUST00000110480.8
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGACTGCCCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATCTaGAACTCCGCTGGCCACCCAGTCTGCGTTCCCCAGCTGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: LTAHACGSHHSAPCI*NSAGHPVCVPQLEG Trigger: TCCTTCCAGCTGGGGAACGCAGACTGGGTGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGGGCAGTCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR GCA 90 bp | CTCCCAGGCTACAACAGCACCAGTCCAGTGTTGACTGCCCATGCGTaGGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: LPGYNSTSPVLTAHA*GSHHSAPCIWNSAG Trigger: GCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGGGCAGTCAACACTGGACTGGTGCTGTTGTAGCCTGGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR GCA 90 bp | CTGCCTCCCAGGCTACAACAGCACCAGTCCAGTGTTGACTGCCCATaGGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGC | + |
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Preference number: 1 (lower is better) Translates to: LPPRLQQHQSSVDCP*VRLTPQCPLHLELR Trigger: GCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGGGCAGTCAACACTGGACTGGTGCTGTTGTAGCCTGGGAGGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR TCA 90 bp | AGTGCAGCATCTGCCTCCCAGGCTACAACAGCACCAGTCCAGTGTTaGCTGCCCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATCT | + |
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Preference number: 1 (lower is better) Translates to: SAASASQATTAPVQC*LPMRAAHTTVPPAS Trigger: AGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGGGCAGTCAACACTGGACTGGTGCTGTTGTAGCCTGGGAGGCAGATGCTGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR GCA 90 bp | CAGCATCTGCCTCCCAGGCTACAACAGCACCAGTCCAGTGTTGACTaGCCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: QHLPPRLQQHQSSVD*PCVRLTPQCPLHLE Trigger: TTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGGGCAGTCAACACTGGACTGGTGCTGTTGTAGCCTGGGAGGCAGATGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR TCA 90 bp | TCTGAGCCTTGGGCTTCTCTGAGAATTCTTAATCTCACCACTGGTTaGACCATTGTCCGGTGTGTAGCAGACCTTTCCCAGCCCTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: SEPWASLRILNLTTG*TIVRCVADLSQPFC Trigger: GCAGAAGGGCTGGGAAAGGTCTGCTACACACCGGACAATGGTTCAACCAGTGGTGAGATTAAGAATTCTCAGAGAAGCCCAAGGCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CCA 90 bp | CCTCTGAGTGCACCTCAAGCTCCCTCATCTTATGGACAAGAAAACTaGAATCCAGACAGGTTTAGCGACCTGCCAAGACTCACAGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: PLSAPQAPSSYGQEN*NPDRFSDLPRLTVV Trigger: CACCACTGTGAGTCTTGGCAGGTCGCTAAACCTGTCTGGATTCCAGTTTTCTTGTCCATAAGATGAGGGAGCTTGAGGTGCACTCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR TCA 90 bp | GAACGCTGGCCAGTGAATTTGAGCCCCAGCCTCTCAATCAGCAAATaGGACAGAATTGGGAAACCATCAGCGGTGTTTGCTTTCATTCCA | + |
|
Preference number: 1 (lower is better) Translates to: ERWPVNLSPSLSISK*DRIGKPSAVFAFIP Trigger: TGGAATGAAAGCAAACACCGCTGATGGTTTCCCAATTCTGTCTCATTTGCTGATTGAGAGGCTGGGGCTCAAATTCACTGGCCAGCGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CCA 90 bp | AGTGAATTTGAGCCCCAGCCTCTCAATCAGCAAATGAGACAGAATTaGGAAACCATCAGCGGTGTTTGCTTTCATTCCACAAGCACAGGC | + |
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Preference number: 1 (lower is better) Translates to: SEFEPQPLNQQMRQN*ETISGVCFHSTSTG Trigger: GCCTGTGCTTGTGGAATGAAAGCAAACACCGCTGATGGTTTCCCAATTCTGTCTCATTTGCTGATTGAGAGGCTGGGGCTCAAATTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CCA 90 bp | ATGCAGACATTTCTTACATCTTTTAGGGTTGGTGAACAGTGTCTATaGCATCTGAAAGTGCAGCATCTGCCTCCCAGGCTACAACAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: MQTFLTSFRVGEQCL*HLKVQHLPPRLQQH Trigger: GTGCTGTTGTAGCCTGGGAGGCAGATGCTGCACTTTCAGATGCCATAGACACTGTTCACCAACCCTAAAAGATGTAAGAAATGTCTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR GCA 90 bp | GCGCAGTGGCAGCCAATCACAAGGAGATTTTCATATACTTTAGATTaGCTTAATGCATTTTCAATGGCACCAGTATGGGCTGAGCATGAA | + |
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Preference number: 1 (lower is better) Translates to: AQWQPITRRFSYTLD*LNAFSMAPVWAEHE Trigger: TTCATGCTCAGCCCATACTGGTGCCATTGAAAATGCATTAAGGCAATCTAAAGTATATGAAAATCTCCTTGTGATTGGCTGCCACTGCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CCA 90 bp | GTCTTTTATAACCAAATACTCCAAATCAGAACTAACCAAGAGATTTaGCTTCCTGAATGTGTCCCATGCTGCCTACGGACAGTTCAGGTA | + |
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Preference number: 1 (lower is better) Translates to: VFYNQILQIRTNQEI*LPECVPCCLRTVQV Trigger: TACCTGAACTGTCCGTAGGCAGCATGGGACACATTCAGGAAGCCAAATCTCTTGGTTAGTTCTGATTTGGAGTATTTGGTTATAAAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR TCA 90 bp | TCACAAAGGTTAAGTTGTCTCTACTTAGCCAAAATGAAGTGGTGTTaGGATAACTATCCAGAAAGCTTAGGATCTCTCTCCTCTCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SQRLSCLYLAKMKWC*DNYPESLGSLSSLL Trigger: GAGGAGAGAGGAGAGAGATCCTAAGCTTTCTGGATAGTTATCTCAACACCACTTCATTTTGGCTAAGTAGAGACAACTTAACCTTTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CCA 90 bp | AATGCATTTTCAATGGCACCAGTATGGGCTGAGCATGAAGAACAATaGCTTTGTTTGCTGTCTTTTATAACCAAATACTCCAAATCAGAA | + |
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Preference number: 1 (lower is better) Translates to: NAFSMAPVWAEHEEQ*LCLLSFITKYSKSE Trigger: TTCTGATTTGGAGTATTTGGTTATAAAAGACAGCAAACAAAGCCATTGTTCTTCATGCTCAGCCCATACTGGTGCCATTGAAAATGCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR-3UTR TCA 90 bp | CCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCAATAGCAACGGCCCTCTaGGTGCACCTCAAGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: PCVRLTPQCPLHLELRWPIATAL*VHLKLP Trigger: AGGGAGCTTGAGGTGCACTCAGAGGGCCGTTGCTAT...TGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CAA 90 bp | AAGTGCAGCATCTGCCTCCCAGGCTACAACAGCACCAGTCCAGTGTaGACTGCCCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATC | + |
|
Preference number: 2 (lower is better) Translates to: KCSICLPGYNSTSPV*TAHACGSHHSAPCI Trigger: GATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGGGCAGTCAACACTGGACTGGTGCTGTTGTAGCCTGGGAGGCAGATGCTGCACTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCATTAATGCATTTTCAATaGCACCAGTATGGGCTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PCVRLTPQCPLHLELRWPLMHFQ*HQYGLS Trigger: GCTCAGCCCATACTGGTGCCATTGAAAATGCATTAA...TGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR-3UTR GCA 90 bp | CCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCACTCAACTGCACAGTCTaGTTATCAGTGTTAACTTTT | + |
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Preference number: 2 (lower is better) Translates to: PCVRLTPQCPLHLELRWPLNCTV*LSVLTF Trigger: AAAAGTTAACACTGATAAGCAGACTGTGCAGTTGAG...TGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAATCCAGACAGGTTTAGCGACCTGCCAAGACTCACAGTGGTGAATAGTACTAACCAAGAGATTTaGCTTCCTGAATGTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: NWNPDRFSDLPRLTVVNSTNQEI*LPECVP Trigger: TGGGACACATTCAGGAAGCCAAATCTCTTGGTTAGT...ACTATTCACCACTGTGAGTCTTGGCAGGTCGCTAAACCTGTCTGGATTCCAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CAA 90 bp | TCTCAATCAGCAAATGAGACAGAATTGGGAAACCATCAGCGGTGTTaGCTTTCATTCCACAAGCACAGGCACAGTCTGAATTTGATGTCA | + |
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Preference number: 2 (lower is better) Translates to: SQSANETELGNHQRC*LSFHKHRHSLNLMS Trigger: TGACATCAAATTCAGACTGTGCCTGTGCTTGTGGAATGAAAGCAAACACCGCTGATGGTTTCCCAATTCTGTCTCATTTGCTGATTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAATCCAGACAGGTTTAGCGACCTGCCAAGACTCACAGTGGTGAATAGTGTGTCATTGTTAACATaGCAGCAAAAAGTGCTACTA | + |
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Preference number: 2 (lower is better) Translates to: NWNPDRFSDLPRLTVVNSVSLLT*QQKVLL Trigger: TAGTAGCACTTTTTGCTGCCATGTTAACAATGACAC...ACTATTCACCACTGTGAGTCTTGGCAGGTCGCTAAACCTGTCTGGATTCCAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCACGACTTTCTAGCTGTGGAAAGGAAACAAACTTACCTAAGAAGCCAGTGGCAAGTAAGGACTGACTaGAGCATTTCTGCTATTACT | + |
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Preference number: 2 (lower is better) Translates to: MHDFLAVERKQTYLRSQWQVRTD*SISAIT Trigger: AGTAATAGCAGAAATGCTTCAGTCAGTCCTTACTTG...CCACTGGCTTCTTAGGTAAGTTTGTTTCCTTTCCACAGCTAGAAAGTCGTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTGAATTTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTATGTTCTACTTTGTGTaGAGAAAAGGGTTGAGCGGC | + |
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Preference number: 2 (lower is better) Translates to: QSEFDVSVIVNMAAKSATMFYFV*RKGLSG Trigger: GCCGCTCAACCCTTTTCTTCACACAAAGTAGAACAT...AGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAAATTCAGACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR-3UTR TCA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGGCACGTACCACTGCCTaGGCAGTTCAAGTTGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMARTTA*AVQVVF Trigger: AAAGACAACTTGAACTGCTCAGGCAGTGGTACGTGC...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCACGACTTTCTAGCTGTGGAAAGGAAACAAACTTACCTAAGAAGCCAGTGGGTGTCATTGTTAACATaGCAGCAAAAAGTGCTACTA | + |
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Preference number: 2 (lower is better) Translates to: MHDFLAVERKQTYLRSQWVSLLT*QQKVLL Trigger: TAGTAGCACTTTTTGCTGCCATGTTAACAATGACAC...CCACTGGCTTCTTAGGTAAGTTTGTTTCCTTTCCACAGCTAGAAAGTCGTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CAA 90 bp | TCAATGGCACCAGTATGGGCTGAGCATGAAGAACAATGGCTTTGTTaGCTGTCTTTTATAACCAAATACTCCAAATCAGAACTAACCAAG | + |
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Preference number: 2 (lower is better) Translates to: SMAPVWAEHEEQWLC*LSFITKYSKSELTK Trigger: CTTGGTTAGTTCTGATTTGGAGTATTTGGTTATAAAAGACAGCAAACAAAGCCATTGTTCTTCATGCTCAGCCCATACTGGTGCCATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR-3UTR TCA 90 bp | ACACTACTAGTCAAAATGCTGCTTCTTGCTGTTTTTAGCAAGGAAGAACTTTTTATGTTCTACTTTGTGTaGAGAAAAGGGTTGAGCGGC | + |
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Preference number: 2 (lower is better) Translates to: TLLVKMLLLAVFSKEELFMFYFV*RKGLSG Trigger: GCCGCTCAACCCTTTTCTTCACACAAAGTAGAACAT...AAAAAGTTCTTCCTTGCTAAAAACAGCAAGAAGCAGCATTTTGACTAGTAGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTAATGTTCTACTTTGTGTaGAGAAAAGGGTTGAGCGGC | + |
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Preference number: 2 (lower is better) Translates to: TEAFLLLLKTTRSTKPTLMFYFV*RKGLSG Trigger: GCCGCTCAACCCTTTTCTTCACACAAAGTAGAACAT...TAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTACCTGAGCATGAAGAACAATaGCTTTGTTTGCTGTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: EAFLLLLKTTRSTKPTLPEHEEQ*LCLLSF Trigger: AAAAGACAGCAAACAAAGCCATTGTTCTTCATGCTC...AGGTAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CCA 72 bp | CTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTaGCCACCCAGTCTGCGTTCCCCAGCTGGAAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LTPQCPLHLELR*PPSLRSPAGRR Trigger: CCTCCTTCCAGCTGGGGAACGCAGACTGGGTGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR GCA 72 bp | CCTCCCAGGCTACAACAGCACCAGTCCAGTGTTGACTaGCCATGCGTGCGGCTCACACCACAGTGCCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: PPRLQQHQSSVD*PCVRLTPQCPL Trigger: CAGGGGGCACTGTGGTGTGAGCCGCACGCATGGGCAGTCAACACTGGACTGGTGCTGTTGTAGCCTGGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR TCA 72 bp | TCTGCCTCCCAGGCTACAACAGCACCAGTCCAGTGTTaGCTGCCCATGCGTGCGGCTCACACCACAGTGCCC | + |
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Preference number: 3 (lower is better) Translates to: SASQATTAPVQC*LPMRAAHTTVP Trigger: GGGCACTGTGGTGTGAGCCGCACGCATGGGCAGTCAACACTGGACTGGTGCTGTTGTAGCCTGGGAGGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR GCA 72 bp | AGGCTACAACAGCACCAGTCCAGTGTTGACTGCCCATaGGTGCGGCTCACACCACAGTGCCCCCTGCATCTG | + |
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Preference number: 3 (lower is better) Translates to: RLQQHQSSVDCP*VRLTPQCPLHL Trigger: CAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGGGCAGTCAACACTGGACTGGTGCTGTTGTAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR GCA 72 bp | TACAACAGCACCAGTCCAGTGTTGACTGCCCATGCGTaGGGCTCACACCACAGTGCCCCCTGCATCTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: YNSTSPVLTAHA*GSHHSAPCIWN Trigger: GTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGGGCAGTCAACACTGGACTGGTGCTGTTGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR TCA 72 bp | TCACACGTACAGATGGTGATAAGACACATACCGAGGTaGCACCAGGGCGCAGTGGCAGCCAATCACAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SHVQMVIRHIPR*HQGAVAANHKE Trigger: CTCCTTGTGATTGGCTGCCACTGCGCCCTGGTGTCACCTCGGTATGTGTCTTATCACCATCTGTACGTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CCA 72 bp | CTACGGACAGTTCAGGTAGCAAAGACTGAGGAACGCTaGCCAGTGAATTTGAGCCCCAGCCTCTCAATCAGC | + |
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Preference number: 3 (lower is better) Translates to: LRTVQVAKTEER*PVNLSPSLSIS Trigger: GCTGATTGAGAGGCTGGGGCTCAAATTCACTGGCCAGCGTTCCTCAGTCTTTGCTACCTGAACTGTCCGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR-3UTR CAA 90 bp | AACTGGAATCCAGACAGGTTTAGCGACCTGCCAAGACTCACAGTGGTGAATAGTCGCTGGCCAGTGAATTaGAGCCCCAGCCTCTCAATC | + |
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Preference number: 3 (lower is better) Translates to: NWNPDRFSDLPRLTVVNSRWPVN*SPSLSI Trigger: GATTGAGAGGCTGGGGCTCAAATTCACTGGCCAGCG...ACTATTCACCACTGTGAGTCTTGGCAGGTCGCTAAACCTGTCTGGATTCCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR TCA 72 bp | CATCTTTTAGGGTTGGTGAACAGTGTCTATGGCATCTaGAAGTGCAGCATCTGCCTCCCAGGCTACAACAGC | + |
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Preference number: 3 (lower is better) Translates to: HLLGLVNSVYGI*KCSICLPGYNS Trigger: GCTGTTGTAGCCTGGGAGGCAGATGCTGCACTTTCAGATGCCATAGACACTGTTCACCAACCCTAAAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CCA 72 bp | GCACCTCAAGCTCCCTCATCTTATGGACAAGAAAACTaGAATCCAGACAGGTTTAGCGACCTGCCAAGACTC | + |
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Preference number: 3 (lower is better) Translates to: APQAPSSYGQEN*NPDRFSDLPRL Trigger: GAGTCTTGGCAGGTCGCTAAACCTGTCTGGATTCCAGTTTTCTTGTCCATAAGATGAGGGAGCTTGAGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR TCA 72 bp | CCAGTGAATTTGAGCCCCAGCCTCTCAATCAGCAAATaGGACAGAATTGGGAAACCATCAGCGGTGTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: PVNLSPSLSISK*DRIGKPSAVFA Trigger: AGCAAACACCGCTGATGGTTTCCCAATTCTGTCTCATTTGCTGATTGAGAGGCTGGGGCTCAAATTCACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR GCA 72 bp | AACCAAGAGATTTGGCTTCCTGAATGTGTCCCATGCTaGCTACGGACAGTTCAGGTAGCAAAGACTGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: NQEIWLPECVPC*LRTVQVAKTEE Trigger: TTCCTCAGTCTTTGCTACCTGAACTGTCCGTAGGCAGCATGGGACACATTCAGGAAGCCAAATCTCTTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR GCA 72 bp | ACTAACCAAGAGATTTGGCTTCCTGAATGTGTCCCATaGTGCCTACGGACAGTTCAGGTAGCAAAGACTGAG | + |
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Preference number: 3 (lower is better) Translates to: TNQEIWLPECVP*CLRTVQVAKTE Trigger: CTCAGTCTTTGCTACCTGAACTGTCCGTAGGCAGCATGGGACACATTCAGGAAGCCAAATCTCTTGGTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CCA 72 bp | GAGCCCCAGCCTCTCAATCAGCAAATGAGACAGAATTaGGAAACCATCAGCGGTGTTTGCTTTCATTCCACA | + |
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Preference number: 3 (lower is better) Translates to: EPQPLNQQMRQN*ETISGVCFHST Trigger: TGTGGAATGAAAGCAAACACCGCTGATGGTTTCCCAATTCTGTCTCATTTGCTGATTGAGAGGCTGGGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR TCA 72 bp | TGTAGCAGACCTTTCCCAGCCCTTCTGCATTTTGTCTaGTCACACGTACAGATGGTGATAAGACACATACCG | + |
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Preference number: 3 (lower is better) Translates to: CSRPFPALLHFV*SHVQMVIRHIP Trigger: CGGTATGTGTCTTATCACCATCTGTACGTGTGATCAGACAAAATGCAGAAGGGCTGGGAAAGGTCTGCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR TCA 72 bp | GAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTaGAGAAAAGGGTTGAGCGGCCACTGTTCCTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: ERHVSQSMFYFV*RKGLSGHCSWH Trigger: GTGCCAGGAACAGTGGCCGCTCAACCCTTTTCTTCACACAAAGTAGAACATAGACTGTGAAACATGTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| 3UTR TCA 72 bp | CTCACAGTGGTGAATAGTCTGAGCCTTGGGCTTCTCTaGGAATTCTTAATCTCACCACTGGTTGAACCATTG | + |
|
Preference number: 3 (lower is better) Translates to: LTVVNSLSLGLL*EFLISPLVEPL Trigger: CAATGGTTCAACCAGTGGTGAGATTAAGAATTCTCAGAGAAGCCCAAGGCTCAGACTATTCACCACTGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| 3UTR CCA 72 bp | TTTCTTACATCTTTTAGGGTTGGTGAACAGTGTCTATaGCATCTGAAAGTGCAGCATCTGCCTCCCAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: FLTSFRVGEQCL*HLKVQHLPPRL Trigger: TAGCCTGGGAGGCAGATGCTGCACTTTCAGATGCCATAGACACTGTTCACCAACCCTAAAAGATGTAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTGGAATCCAGACAGGTTTAGCGACCTGCCAAGACTCACAGTGGTGAATAGTTTGATGTCAGTGTCATaGTTAACATGGCAGCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NWNPDRFSDLPRLTVVNSLMSVS*LTWQQK Trigger: TTTTTGCTGCCATGTTAACAATGACACTGACATCAA...ACTATTCACCACTGTGAGTCTTGGCAGGTCGCTAAACCTGTCTGGATTCCAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| 3UTR CCA 72 bp | TTAGATTGCCTTAATGCATTTTCAATGGCACCAGTATaGGCTGAGCATGAAGAACAATGGCTTTGTTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LDCLNAFSMAPV*AEHEEQWLCLL Trigger: CAGCAAACAAAGCCATTGTTCTTCATGCTCAGCCCATACTGGTGCCATTGAAAATGCATTAAGGCAATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCACGACTTTCTAGCTGTGGAAAGGAAACAAACTTACCTAAGAAGCCAGTGGAAAAATCCTAAATATTaGCCCTCAACTGCACAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: MHDFLAVERKQTYLRSQWKNPKY*PSTAQS Trigger: AGACTGTGCAGTTGAGGGCAAATATTTAGGATTTTT...CCACTGGCTTCTTAGGTAAGTTTGTTTCCTTTCCACAGCTAGAAAGTCGTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| 3UTR TCA 72 bp | TTAAGTTGTCTCTACTTAGCCAAAATGAAGTGGTGTTaGGATAACTATCCAGAAAGCTTAGGATCTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSCLYLAKMKWC*DNYPESLGSLS Trigger: GGAGAGAGATCCTAAGCTTTCTGGATAGTTATCTCAACACCACTTCATTTTGGCTAAGTAGAGACAACTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| 3UTR TCA 72 bp | CCCTATCACTATGCTGATCCCTCTTACGAAGAAAAATaGTTAAGACCTAAGATAGATGGAGGAAAAGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: PYHYADPSYEEK*LRPKIDGGKAM Trigger: CATTGCTTTTCCTCCATCTATCTTAGGTCTTAATCATTTTTCTTCGTAAGAGGGATCAGCATAGTGATAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| 3UTR CCA 72 bp | TTTGTTACTTCTATGTTTTATAAAAGACCTGGTCTGTaGCGGTCTAAGAAAGACATGTTTCACAGTCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: FVTSMFYKRPGL*RSKKDMFHSLC Trigger: ACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAACAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCACCCAGTGAGGGGCCAGGGCTaGGTAGGGAGGCGGCGACGA | + |
|
Preference number: 4 (lower is better) Translates to: ACGSHHSAPCIWNSAGHPVRGQG*VGRRRR Trigger: TCGTCGCCGCCTCCCTACCCAGCCCTGGCCCCTCAC...TGGGTGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR GCA 90 bp | CCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCAGGGGCCCGTCCTGCTTaGTCCTGGGGCTTGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCVRLTPQCPLHLELRWPGARPA*SWGLVL Trigger: GAGAACCAAGCCCCAGGAGCAAGCAGGACGGGCCCC...TGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CCA 90 bp | GCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCACCCATGGGGCTCTCCTGGCTaGACACAGTGGCATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACGSHHSAPCIWNSAGHPWGSPG*TQWHPQ Trigger: CTGAGGATGCCACTGTGTCCAGCCAGGAGAGCCCCA...TGGGTGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CCA 90 bp | GCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCACCCATCCCAGGCTTGGCCGTaGCTCCAGGCTGCACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ACGSHHSAPCIWNSAGHPSQAWP*LQAAQF Trigger: AAACTGTGCAGCCTGGAGCCACGGCCAAGCCTGGGA...TGGGTGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR TCA 90 bp | CCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCAGGACGGCTTGGAGTCTaGTCCTGGTTCTCTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCVRLTPQCPLHLELRWPGRLGV*SWFSWS Trigger: GCTCCAAGAGAACCAGGATCAGACTCCAAGCCGTCC...TGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR GCA 90 bp | GCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCACCCAGGCCAGCTTCATGCTTaGCATACGGGGAATCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ACGSHHSAPCIWNSAGHPGQLHA*HTGNQG Trigger: ACCTTGATTCCCCGTATGGCAAGCATGAAGCTGGCC...TGGGTGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR GCA 90 bp | GCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCACCCACGGAGTTCAAAGGCCTaGCCTATGGTGCTTATGACG | + |
|
Preference number: 4 (lower is better) Translates to: ACGSHHSAPCIWNSAGHPRSSKA*PMVLMT Trigger: CGTCATAAGCACCATAGGGCAGGCCTTTGAACTCCG...TGGGTGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCACCCACCTTGGTCCTCACCTTaGCTTCTGGATCCACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ACGSHHSAPCIWNSAGHPPWSSP*LLDPPR Trigger: TCTTGGTGGATCCAGAAGGCAAGGTGAGGACCAAGG...TGGGTGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCACCCAATTGCAGCACTTCAATaGAGCCCATGTACCGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ACGSHHSAPCIWNSAGHPIAALQ*SPCTAH Trigger: GTGTGCGGTACATGGGCTGCATTGAAGTGCTGCAAT...TGGGTGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR GCA 90 bp | CCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCATCCTCGTCCCACAGCTaGTGCCTAATGTGTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PCVRLTPQCPLHLELRWPSSSHS*CLMCGK Trigger: TTTGCCACACATTAGGCAGCAGCTGTGGGACGAGGA...TGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR TCA 90 bp | GCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCACCCATTTTCAAGTACTGTTTaGACCGGAGTTCAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ACGSHHSAPCIWNSAGHPFSSTV*TGVQRP Trigger: AGGCCTTTGAACTCCGGTTCAAACAGTACTTGAAAA...TGGGTGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | CCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCAACACAGGCGACTTATTaGTTCCCTTGTAACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PCVRLTPQCPLHLELRWPTQATY*FPCNLG Trigger: ACCCAAGTTACAAGGGAAGCAATAAGTCGCCTGTGT...TGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CCA 90 bp | GCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCACCCAGCTTCCCTTGTAACTTaGGTTCTCATTCCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: ACGSHHSAPCIWNSAGHPASLVT*VLIPKS Trigger: GGATTTTGGAATGAGAACCCAAGTTACAAGGGAAGC...TGGGTGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR GCA 90 bp | ATGCACGACTTTCTAGCTGTGGAAAGGAAACAAACTTACCTAAGAAGCCAGTGGCCGTTCCCCAACAGGTaGTGCAGAGGGGGCCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MHDFLAVERKQTYLRSQWPFPNR*CRGGPS Trigger: GGACGGGCCCCCTCTGCAGCACCTGTTGGGGAACGG...CCACTGGCTTCTTAGGTAAGTTTGTTTCCTTTCCACAGCTAGAAAGTCGTGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCCTGTAGTGACTGTATCTTTATATGCATAGGCGGTGCCTTTCCGAGGTaGCAGGGGCTCCCCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSCSDCIFICIGGAFPR*QGLPCG Trigger: GCCACAGGGGAGCCCCTGGCACCTCGGAAAGGCACC...GCCTATGCATATAAAGATACAGTCACTACAGGAGAGAGAGAGAGAGAGAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | AACTGGAATCCAGACAGGTTTAGCGACCTGCCAAGACTCACAGTGGTGAATAGTTCCCAGGCTTGGCCGTaGCTCCAGGCTGCACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NWNPDRFSDLPRLTVVNSSQAWP*LQAAQF Trigger: AAACTGTGCAGCCTGGAGCCACGGCCAAGCCTGGGA...ACTATTCACCACTGTGAGTCTTGGCAGGTCGCTAAACCTGTCTGGATTCCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | GACCTCCGTGCAGATGAGTATCGCATTTCCAAATGGACCAAAATTATTATTCTCGTGCGCTCCCAGGCTTaGCCGTGGCTCCAGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLRADEYRISKWTKIIILVRSQA*PWLQAA Trigger: TGCAGCCTGGAGCCACGGCCAAGCCTGGGAGCGCAC...GAGAATAATAATTTTGGTCCATTTGGAAATGCGATACTCATCTGCACGGAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTTCCCAGGCTTGGCCGTaGCTCCAGGCTGCACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLWRSKKDMFHSLCSTLCSQAWP*LQAAQF Trigger: AAACTGTGCAGCCTGGAGCCACGGCCAAGCCTGGGA...ACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTTTCCCCAACAGGTGCTaGAGAGGGGGCCCGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCFPNRC*RGGPSC Trigger: GCAGGACGGGCCCCCTCTGCAGCACCTGTTGGGGAA...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR GCA 90 bp | ACACTACTAGTCAAAATGCTGCTTCTTGCTGTTTTTAGCAAGGAAGAACTTTTTGGTGCCTTTCCGAGGTaGCAGGGGCTCCCCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLLVKMLLLAVFSKEELFGAFPR*QGLPCG Trigger: GCCACAGGGGAGCCCCTGGCACCTCGGAAAGGCACC...AAAAAGTTCTTCCTTGCTAAAAACAGCAAGAAGCAGCATTTTGACTAGTAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAGTTCAAGTTGTCTTTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTGGTGCCTTTCCGAGGTaGCAGGGGCTCCCCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQFKLSLASEIEVVLLAFGAFPR*QGLPCG Trigger: GCCACAGGGGAGCCCCTGGCACCTCGGAAAGGCACC...AAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAAAGACAACTTGAACTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | ATGCACGACTTTCTAGCTGTGGAAAGGAAACAAACTTACCTAAGAAGCCAGTGGTCGTCCCACAGCTGCTaGCTAATGTGTGGCAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: MHDFLAVERKQTYLRSQWSSHSC*LMCGKA Trigger: CGCTTTGCCACACATTAGGCAGCAGCTGTGGGACGA...CCACTGGCTTCTTAGGTAAGTTTGTTTCCTTTCCACAGCTAGAAAGTCGTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTTCTCCGCTGCCCCTCTaGTCAGCTTGCCATGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKDLVCGGLRKTCFTVYVSPLPL*SACHGS Trigger: GCTTCCATGGCAAGCTGAGCAGAGGGGCAGCGGAGA...AACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGGTGCGCTCCCAGGCTTaGCCGTGGCTCCAGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMVRSQA*PWLQAA Trigger: TGCAGCCTGGAGCCACGGCCAAGCCTGGGAGCGCAC...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR TCA 90 bp | AACTGGAATCCAGACAGGTTTAGCGACCTGCCAAGACTCACAGTGGTGAATAGTCAAGGTTCATCAGTGTaGGGCTGCTTGTTGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: NWNPDRFSDLPRLTVVNSQGSSV*GCLLKQ Trigger: CTGTTTCAACAAGCAGCCTCACACTGATGAACCTTG...ACTATTCACCACTGTGAGTCTTGGCAGGTCGCTAAACCTGTCTGGATTCCAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCCTGTAGTGACTGTATCTTTATATGCATAGGCCGGAGTTCAAAGGCCTaGCCTATGGTGCTTATGACG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSCSDCIFICIGRSSKA*PMVLMT Trigger: CGTCATAAGCACCATAGGGCAGGCCTTTGAACTCCG...GCCTATGCATATAAAGATACAGTCACTACAGGAGAGAGAGAGAGAGAGAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | GACCTCCGTGCAGATGAGTATCGCATTTCCAAATGGACCAAAATTATTATTCTCGCCGTGGCTCCAGGCTaGACAGTTTCTGGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DLRADEYRISKWTKIIILAVAPG*TVSGAF Trigger: AAAGGCACCAGAAACTGTGCAGCCTGGAGCCACGGC...GAGAATAATAATTTTGGTCCATTTGGAAATGCGATACTCATCTGCACGGAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTTCGTCCCACAGCTGCTaGCTAATGTGTGGCAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLWRSKKDMFHSLCSTLCSSHSC*LMCGKA Trigger: CGCTTTGCCACACATTAGGCAGCAGCTGTGGGACGA...ACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGGCCGTGGGGCTCTCCTaGCTGGACACAGTGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMAVGLS*LDTVAS Trigger: GGATGCCACTGTGTCCAGCCAGGAGAGCCCCACGGC...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR GCA 90 bp | ATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTTGGGCCATTCCACTaGGACACTCCAGTATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IKDLVCGGLRKTCFTVYVLGPFH*DTPVCG Trigger: GCCACATACTGGAGTGTCGCAGTGGAATGGCCCAAG...AACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTTGCGCACATCTGAAATaGCGCCTTCAGGTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKDLVCGGLRKTCFTVYVCAHLK*RLQVAA Trigger: AGCAGCCACCTGAAGGCGGCATTTCAGATGTGCGCA...AACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTTCCACTCTCCAGAAGTaGCTCAGCGATGGTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLWRSKKDMFHSLCSTLCSTLQK*LSDGVS Trigger: TGACACACCATCGCTGAGGCACTTCTGGAGAGTGGA...ACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTGAATTTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTCCCCTCTGCTCAGCTTaGCATGGAAGCACTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QSEFDVSVIVNMAAKSATPLCSA*HGSTPR Trigger: ACGAGGAGTGCTTCCATGGCAAGCTGAGCAGAGGGG...AGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAAATTCAGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | CGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTGAAGAAAAGTCTCCGCTGCCCCTCTaGTCAGCTTGCCATGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSKKDMFHSLCSTLCEEKSPLPL*SACHGS Trigger: GCTTCCATGGCAAGCTGAGCAGAGGGGCAGCGGAGA...CTTTTCTTCACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTAGCGTGAGTCCTGCCTaGCTGTCCTGGCTGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCSVSPA*LSWLRS Trigger: AGAACGCAGCCAGGACAGCCAGGCAGGACTCACGCT...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTCCTGGCTGGACACAGTaGCATCCTCAGTCGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCPGWTQ*HPQSAG Trigger: ACCTGCCGACTGAGGATGCCACTGTGTCCAGCCAGG...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTACTTGCTCCTGGGGCTTaGTTCTCCAGGGCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TEAFLLLLKTTRSTKPTLLAPGA*FSRARQ Trigger: CTGCCTGGCCCTGGAGAACCAAGCCCCAGGAGCAAG...TAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CCA 90 bp | GAGCAGTTCAAGTTGTCTTTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTCGTCCTGCTTGCTCCTaGGGCTTGGTTCTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQFKLSLASEIEVVLLAFRPACS*GLVLQG Trigger: GCCCTGGAGAACCAAGCCCCAGGAGCAAGCAGGACG...AAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAAAGACAACTTGAACTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CCA 90 bp | GACCTCCGTGCAGATGAGTATCGCATTTCCAAATGGACCAAAATTATTATTCTCCCAAGAGAAGATGCTTaGCCTGGCCACCTTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DLRADEYRISKWTKIIILPREDA*PGHLAV Trigger: GACTGCAAGGTGGCCAGGCCAAGCATCTTCTCTTGG...GAGAATAATAATTTTGGTCCATTTGGAAATGCGATACTCATCTGCACGGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCCTGTAGTGACTGTATCTTTATATGCATAGGCCCTCACCTTGCCTTCTaGATCCACCAAGAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSCSDCIFICIGPHLAF*IHQEKM Trigger: CATCTTCTCTTGGTGGATCCAGAAGGCAAGGTGAGG...GCCTATGCATATAAAGATACAGTCACTACAGGAGAGAGAGAGAGAGAGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| CDS-3UTR CCA 90 bp | ATGCACGACTTTCTAGCTGTGGAAAGGAAACAAACTTACCTAAGAAGCCAGTGGCCTCACCTTGCCTTCTaGATCCACCAAGAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: MHDFLAVERKQTYLRSQWPHLAF*IHQEKM Trigger: CATCTTCTCTTGGTGGATCCAGAAGGCAAGGTGAGG...CCACTGGCTTCTTAGGTAAGTTTGTTTCCTTTCCACAGCTAGAAAGTCGTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| CDS-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCCTGTAGTGACTGTATCTTTATATGCATAGGCCAAACACATGGTCCTTaGTCCTCACCTTGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSCSDCIFICIGQTHGP*SSPCLL Trigger: CAGAAGGCAAGGTGAGGACCAAGGACCATGTGTTTG...GCCTATGCATATAAAGATACAGTCACTACAGGAGAGAGAGAGAGAGAGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| CDS-3UTR TCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTGTCCTACATACAGCGTaGGTCCTGCCTGGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCVLHTA*VLPGCP Trigger: AGGACAGCCAGGCAGGACTCACGCTGTATGTAGGAC...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR TCA 90 bp | GACCTCCGTGCAGATGAGTATCGCATTTCCAAATGGACCAAAATTATTATTCTCCTTCGTCCAAAGACGTaGTGGACTCGTTCCGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLRADEYRISKWTKIIILLRPKT*WTRSES Trigger: GCTTTCGGAACGAGTCCATCACGTCTTTGGACGAAG...GAGAATAATAATTTTGGTCCATTTGGAAATGCGATACTCATCTGCACGGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR GCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTGCCGTGGCTCCAGGCTaGACAGTTTCTGGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCAVAPG*TVSGAF Trigger: AAAGGCACCAGAAACTGTGCAGCCTGGAGCCACGGC...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | GACCTCCGTGCAGATGAGTATCGCATTTCCAAATGGACCAAAATTATTATTCTCTCCTCGTCCCACAGCTaGTGCCTAATGTGTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLRADEYRISKWTKIIILSSSHS*CLMCGK Trigger: TTTGCCACACATTAGGCAGCAGCTGTGGGACGAGGA...GAGAATAATAATTTTGGTCCATTTGGAAATGCGATACTCATCTGCACGGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTCACCAATGCAATGTGACCCCCCTCTGCTCAGCTTaGCATGGAAGCACTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LASEIEVVLLAFHQCNVTPLCSA*HGSTPR Trigger: ACGAGGAGTGCTTCCATGGCAAGCTGAGCAGAGGGG...GGTCACATTGCATTGGTGAAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTCCCCTCTGCTCAGCTTaGCATGGAAGCACTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCPLCSA*HGSTPR Trigger: ACGAGGAGTGCTTCCATGGCAAGCTGAGCAGAGGGG...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGTTCAAGTTGTCTTTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTTCTCCGCTGCCCCTCTaGTCAGCTTGCCATGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQFKLSLASEIEVVLLAFSPLPL*SACHGS Trigger: GCTTCCATGGCAAGCTGAGCAGAGGGGCAGCGGAGA...AAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAAAGACAACTTGAACTGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR CCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTGGATTCTGGGGACGCTaGACGGCTTGGAGTCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCGFWGR*TAWSLI Trigger: GATCAGACTCCAAGCCGTCCAGCGTCCCCAGAATCC...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
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| CDS-3UTR CCA 90 bp | GACCTCCGTGCAGATGAGTATCGCATTTCCAAATGGACCAAAATTATTATTCTCGTGCTTATGACGTCTTaGGCCATTCCACTGCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: DLRADEYRISKWTKIIILVLMTS*AIPLRH Trigger: GTGTCGCAGTGGAATGGCCCAAGACGTCATAAGCAC...GAGAATAATAATTTTGGTCCATTTGGAAATGCGATACTCATCTGCACGGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR CCA 90 bp | GGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTCCTCACCTTGCCTTCTaGATCCACCAAGAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLWRSKKDMFHSLCSTLCPHLAF*IHQEKM Trigger: CATCTTCTCTTGGTGGATCCAGAAGGCAAGGTGAGG...ACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR CCA 90 bp | AACTGGAATCCAGACAGGTTTAGCGACCTGCCAAGACTCACAGTGGTGAATAGTACATTATCAAACACATaGTCCTTGGTCCTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NWNPDRFSDLPRLTVVNSTLSNT*SLVLTL Trigger: CAAGGTGAGGACCAAGGACCATGTGTTTGATAATGT...ACTATTCACCACTGTGAGTCTTGGCAGGTCGCTAAACCTGTCTGGATTCCAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| 3UTR CAA 72 bp | GCAAATGAGACAGAATTGGGAAACCATCAGCGGTGTTaGCTTTCATTCCACAAGCACAGGCACAGTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ANETELGNHQRC*LSFHKHRHSLN Trigger: ATTCAGACTGTGCCTGTGCTTGTGGAATGAAAGCAAACACCGCTGATGGTTTCCCAATTCTGTCTCATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| CDS-3UTR TCA 90 bp | TCAGAAGATAGTTTGTTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTGCCCTATGGTGCTTATaGCGTCTTGGGCCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SEDSLLLLCFIKDLVCGGALWCL*RLGPFH Trigger: GTGGAATGGCCCAAGACGTCATAAGCACCATAGGGC...ACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAACAAACTATCTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR TCA 90 bp | CGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTGAAGAAAAGGCCCTATGGTGCTTATaGCGTCTTGGGCCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSKKDMFHSLCSTLCEEKALWCL*RLGPFH Trigger: GTGGAATGGCCCAAGACGTCATAAGCACCATAGGGC...CTTTTCTTCACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR TCA 90 bp | GAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTACCTGCCCTATGGTGCTTATaGCGTCTTGGGCCATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EAFLLLLKTTRSTKPTLPALWCL*RLGPFH Trigger: GTGGAATGGCCCAAGACGTCATAAGCACCATAGGGC...AGGTAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| CDS-3UTR GCA 90 bp | GAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTACCTCTTGGGCCATTCCACTaGGACACTCCAGTATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EAFLLLLKTTRSTKPTLPLGPFH*DTPVCG Trigger: GCCACATACTGGAGTGTCGCAGTGGAATGGCCCAAG...AGGTAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| CDS-3UTR GCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTCTTGGGCCATTCCACTaGGACACTCCAGTATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCLGPFH*DTPVCG Trigger: GCCACATACTGGAGTGTCGCAGTGGAATGGCCCAAG...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR GCA 90 bp | GAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTACCTTGCGCACATCTGAAATaGCGCCTTCAGGTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EAFLLLLKTTRSTKPTLPCAHLK*RLQVAA Trigger: AGCAGCCACCTGAAGGCGGCATTTCAGATGTGCGCA...AGGTAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| CDS-3UTR GCA 90 bp | CAGTCTGAATTTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTTCCACTCTCCAGAAGTaGCTCAGCGATGGTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSEFDVSVIVNMAAKSATSTLQK*LSDGVS Trigger: TGACACACCATCGCTGAGGCACTTCTGGAGAGTGGA...AGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAAATTCAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| CDS-3UTR GCA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGGCCGTGGCTCCAGGCTaGACAGTTTCTGGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMAVAPG*TVSGAF Trigger: AAAGGCACCAGAAACTGTGCAGCCTGGAGCCACGGC...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR GCA 90 bp | TTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTCACCAATGCAATGTGACCTCGTCCCACAGCTGCTaGCTAATGTGTGGCAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LASEIEVVLLAFHQCNVTSSHSC*LMCGKA Trigger: CGCTTTGCCACACATTAGGCAGCAGCTGTGGGACGA...GGTCACATTGCATTGGTGAAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR GCA 90 bp | TCAGAAGATAGTTTGTTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCAAAAGTTTCTCCGCTaGCCCTCTGCTCAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEDSLLLLCFIKDLVCGGQKFLR*PSAQLA Trigger: GGCAAGCTGAGCAGAGGGGCAGCGGAGAAACTTTTG...ACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAACAAACTATCTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR GCA 90 bp | CAGTCTGAATTTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTCCTTGGTCCTCACCTTaGCTTCTGGATCCACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSEFDVSVIVNMAAKSATPWSSP*LLDPPR Trigger: TCTTGGTGGATCCAGAAGGCAAGGTGAGGACCAAGG...AGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAAATTCAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| CDS-3UTR CCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTAGAAGATGCTTGGCCTaGCCACCTTGCAGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCRRCLA*PPCSPL Trigger: GAGTGGACTGCAAGGTGGCCAGGCCAAGCATCTTCT...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR CCA 90 bp | TTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTCACCAATGCAATGTGACCAGAAGATGCTTGGCCTaGCCACCTTGCAGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LASEIEVVLLAFHQCNVTRRCLA*PPCSPL Trigger: GAGTGGACTGCAAGGTGGCCAGGCCAAGCATCTTCT...GGTCACATTGCATTGGTGAAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR CCA 90 bp | GAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTACCTCCAAGAGAAGATGCTTaGCCTGGCCACCTTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EAFLLLLKTTRSTKPTLPPREDA*PGHLAV Trigger: GACTGCAAGGTGGCCAGGCCAAGCATCTTCTCTTGG...AGGTAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
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| CDS-3UTR CCA 90 bp | GACCTCCGTGCAGATGAGTATCGCATTTCCAAATGGACCAAAATTATTATTCTCCAAACACATGGTCCTTaGTCCTCACCTTGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLRADEYRISKWTKIIILQTHGP*SSPCLL Trigger: CAGAAGGCAAGGTGAGGACCAAGGACCATGTGTTTG...GAGAATAATAATTTTGGTCCATTTGGAAATGCGATACTCATCTGCACGGAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR TCA 90 bp | GACCTCCGTGCAGATGAGTATCGCATTTCCAAATGGACCAAAATTATTATTCTCCCCTCCAGAGGCAAATaGAATCGATTGCATTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DLRADEYRISKWTKIIILPSRGK*NRLHLV Trigger: CACCAAATGCAATCGATTTCATTTGCCTCTGGAGGG...GAGAATAATAATTTTGGTCCATTTGGAAATGCGATACTCATCTGCACGGAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR GCA 90 bp | TTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTCACCAATGCAATGTGACCTCCACTCTCCAGAAGTaGCTCAGCGATGGTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LASEIEVVLLAFHQCNVTSTLQK*LSDGVS Trigger: TGACACACCATCGCTGAGGCACTTCTGGAGAGTGGA...GGTCACATTGCATTGGTGAAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR GCA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGCAAAAGTTTCTCCGCTaGCCCTCTGCTCAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMQKFLR*PSAQLA Trigger: GGCAAGCTGAGCAGAGGGGCAGCGGAGAAACTTTTG...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAGATAGTTTGTTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTTTGGCCTGGCCACCTTaGAGTCCACTCAGTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SEDSLLLLCFIKDLVCGGLAWPP*SPLSTN Trigger: GTTTGTACTGAGTGGACTGCAAGGTGGCCAGGCCAA...ACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAACAAACTATCTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTTTGGCCTGGCCACCTTaGAGTCCACTCAGTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCLAWPP*SPLSTN Trigger: GTTTGTACTGAGTGGACTGCAAGGTGGCCAGGCCAA...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTCACCAATGCAATGTGACCCCTTGGTCCTCACCTTaGCTTCTGGATCCACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LASEIEVVLLAFHQCNVTPWSSP*LLDPPR Trigger: TCTTGGTGGATCCAGAAGGCAAGGTGAGGACCAAGG...GGTCACATTGCATTGGTGAAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTAGGCAACATAGTCTGTaGTATCAGGGTCCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCRQHSL*YQGPLQ Trigger: CTGGAGGGGACCCTGATACCACAGACTATGTTGCCT...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCGCTCGTTGGTTGACTaGATCTTTAGCTACATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IKDLVCGGLRKTCFTVYVRSLVD*IFSYIG Trigger: GCCTATGTAGCTAAAGATCCAGTCAACCAACGAGCG...AACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTGTGCTTATGACGTCTTaGGCCATTCCACTGCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCVLMTS*AIPLRH Trigger: GTGTCGCAGTGGAATGGCCCAAGACGTCATAAGCAC...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGATAGTTTGTTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTGTGCTTATGACGTCTTaGGCCATTCCACTGCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SEDSLLLLCFIKDLVCGGVLMTS*AIPLRH Trigger: GTGTCGCAGTGGAATGGCCCAAGACGTCATAAGCAC...ACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAACAAACTATCTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTGAATTTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTGCTGCTTCCCCGGGATaGAGTTGTAATAGTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSEFDVSVIVNMAAKSATAASPG*SCNSHG Trigger: ACCATGACTATTACAACTCCATCCCGGGGAAGCAGC...AGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAAATTCAGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTAAGAAGATGCTTGGCCTaGCCACCTTGCAGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TEAFLLLLKTTRSTKPTLRRCLA*PPCSPL Trigger: GAGTGGACTGCAAGGTGGCCAGGCCAAGCATCTTCT...TAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR TCA 90 bp | ACACTACTAGTCAAAATGCTGCTTCTTGCTGTTTTTAGCAAGGAAGAACTTTTTTCAGACCCAGAAAAGTaGTGGGGTTGGCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLLVKMLLLAVFSKEELFSDPEK*WGWPAS Trigger: TGAAGCTGGCCAACCCCATCACTTTTCTGGGTCTGA...AAAAAGTTCTTCCTTGCTAAAAACAGCAAGAAGCAGCATTTTGACTAGTAGTGT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR TCA 90 bp | GAGCAGTTCAAGTTGTCTTTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTCCCCTGTGGCAGAGCTaGGCTTTGATTTCCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: EQFKLSLASEIEVVLLAFPLWQS*ALISSI Trigger: TATGCTGGAAATCAAAGCTCAGCTCTGCCACAGGGG...AAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAAAGACAACTTGAACTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR TCA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGCCCCTGTGGCAGAGCTaGGCTTTGATTTCCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMPLWQS*ALISSI Trigger: TATGCTGGAAATCAAAGCTCAGCTCTGCCACAGGGG...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGGGTTGGCCAGCTTCATaGTTGCCATACGGGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMGWPAS*LPYGES Trigger: TGATTCCCCGTATGGCAAGCATGAAGCTGGCCAACC...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR GCA 90 bp | ACACTACTAGTCAAAATGCTGCTTCTTGCTGTTTTTAGCAAGGAAGAACTTTTTCGGAGTTCAAAGGCCTaGCCTATGGTGCTTATGACG | + |
|
Preference number: 4 (lower is better) Translates to: TLLVKMLLLAVFSKEELFRSSKA*PMVLMT Trigger: CGTCATAAGCACCATAGGGCAGGCCTTTGAACTCCG...AAAAAGTTCTTCCTTGCTAAAAACAGCAAGAAGCAGCATTTTGACTAGTAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGTCCTCGTCCCACAGCTaGTGCCTAATGTGTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMSSSHS*CLMCGK Trigger: TTTGCCACACATTAGGCAGCAGCTGTGGGACGAGGA...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | ACACTACTAGTCAAAATGCTGCTTCTTGCTGTTTTTAGCAAGGAAGAACTTTTTTTGGCCTGGCCACCTTaGAGTCCACTCAGTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLVKMLLLAVFSKEELFLAWPP*SPLSTN Trigger: GTTTGTACTGAGTGGACTGCAAGGTGGCCAGGCCAA...AAAAAGTTCTTCCTTGCTAAAAACAGCAAGAAGCAGCATTTTGACTAGTAGTGT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTAGAAAGCGGCTGTACTTaGTCCTGTGAAGCATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEAFLLLLKTTRSTKPTLESGCT*SCEASP Trigger: TGGGGATGCTTCACAGGACCAAGTACAGCCGCTTTC...TAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CCA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGAGGCAACATAGTCTGTaGTATCAGGGTCCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMRQHSL*YQGPLQ Trigger: CTGGAGGGGACCCTGATACCACAGACTATGTTGCCT...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | ACACTACTAGTCAAAATGCTGCTTCTTGCTGTTTTTAGCAAGGAAGAACTTTTTAGGCAACATAGTCTGTaGTATCAGGGTCCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLLVKMLLLAVFSKEELFRQHSL*YQGPLQ Trigger: CTGGAGGGGACCCTGATACCACAGACTATGTTGCCT...AAAAAGTTCTTCCTTGCTAAAAACAGCAAGAAGCAGCATTTTGACTAGTAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTGCTGCTTCCCCGGGATaGAGTTGTAATAGTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCAASPG*SCNSHG Trigger: ACCATGACTATTACAACTCCATCCCGGGGAAGCAGC...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTACCTGCTGCTTCCCCGGGATaGAGTTGTAATAGTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: EAFLLLLKTTRSTKPTLPAASPG*SCNSHG Trigger: ACCATGACTATTACAACTCCATCCCGGGGAAGCAGC...AGGTAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | CGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTGAAGAAAAGCAAACACATGGTCCTTaGTCCTCACCTTGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSKKDMFHSLCSTLCEEKQTHGP*SSPCLL Trigger: CAGAAGGCAAGGTGAGGACCAAGGACCATGTGTTTG...CTTTTCTTCACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCCTGTAGTGACTGTATCTTTATATGCATAGGCTTCATTCCTGAAAACTaGAGATTGCTTTTGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSCSDCIFICIGFIPEN*RLLLPR Trigger: TCTTGGCAAAAGCAATCTTCAGTTTTCAGGAATGAA...GCCTATGCATATAAAGATACAGTCACTACAGGAGAGAGAGAGAGAGAGAGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CCA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTCGCTCGTTGGTTGACTaGATCTTTAGCTACATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCRSLVD*IFSYIG Trigger: GCCTATGTAGCTAAAGATCCAGTCAACCAACGAGCG...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGTTCAAGTTGTCTTTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTCGCTCGTTGGTTGACTaGATCTTTAGCTACATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQFKLSLASEIEVVLLAFRSLVD*IFSYIG Trigger: GCCTATGTAGCTAAAGATCCAGTCAACCAACGAGCG...AAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAAAGACAACTTGAACTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| 3UTR CAA 72 bp | TTGCTTTCATTCCACAAGCACAGGCACAGTCTGAATTaGATGTCAGTGTCATTGTTAACATGGCAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSFHKHRHSLN*MSVSLLTWQQK Trigger: TTTTTGCTGCCATGTTAACAATGACACTGACATCAAATTCAGACTGTGCCTGTGCTTGTGGAATGAAAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCACTTCCAGAAGAGATaGTTGGCAAATTATTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: IKDLVCGGLRKTCFTVYVHFQKR*LANYYP Trigger: TGGATAATAATTTGCCAATCATCTCTTCTGGAAGTG...AACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTTTGCATTTGGTGATTTaGAATAATCTGTTGGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLWRSKKDMFHSLCSTLCLHLVI*NNLLVV Trigger: GACAACCAACAGATTATTGCAAATCACCAAATGCAA...ACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
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| CDS-3UTR CCA 90 bp | GAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTACCTACATTATCAAACACATaGTCCTTGGTCCTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EAFLLLLKTTRSTKPTLPTLSNT*SLVLTL Trigger: CAAGGTGAGGACCAAGGACCATGTGTTTGATAATGT...AGGTAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| 3UTR CAA 72 bp | AAGCACAGGCACAGTCTGAATTTGATGTCAGTGTCATaGTTAACATGGCAGCAAAAAGTGCTACTAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KHRHSLNLMSVS*LTWQQKVLLNK Trigger: TTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAAATTCAGACTGTGCCTGTGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR TCA 90 bp | ACACTACTAGTCAAAATGCTGCTTCTTGCTGTTTTTAGCAAGGAAGAACTTTTTTTTTCAAGTACTGTTTaGACCGGAGTTCAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLVKMLLLAVFSKEELFFSSTV*TGVQRP Trigger: AGGCCTTTGAACTCCGGTTCAAACAGTACTTGAAAA...AAAAAGTTCTTCCTTGCTAAAAACAGCAAGAAGCAGCATTTTGACTAGTAGTGT 38% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR CCA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGACATTATCAAACACATaGTCCTTGGTCCTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMTLSNT*SLVLTL Trigger: CAAGGTGAGGACCAAGGACCATGTGTTTGATAATGT...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR TCA 90 bp | TCAGAAGATAGTTTGTTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCACTTCCAGAAGAGATaGTTGGCAAATTATTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEDSLLLLCFIKDLVCGGHFQKR*LANYYP Trigger: TGGATAATAATTTGCCAATCATCTCTTCTGGAAGTG...ACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAACAAACTATCTTCTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTACACTTCCAGAAGAGATaGTTGGCAAATTATTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEAFLLLLKTTRSTKPTLHFQKR*LANYYP Trigger: TGGATAATAATTTGCCAATCATCTCTTCTGGAAGTG...TAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTCAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS CCA 90 bp | GAATCAAGGTGCACAGCGCCGTGGGGCTCTCCTGGCTGGACACAGTaGCATCCTCAGTCGGCAGGTGAGGGGCCAGGGCTGGGTAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ESRCTAPWGSPGWTQ*HPQSAGEGPGLGRE Trigger: CTCCCTACCCAGCCCTGGCCCCTCACCTGCCGACTGAGGATGCCACTGTGTCCAGCCAGGAGAGCCCCACGGCGCTGTGCACCTTGATTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CAA 90 bp | CCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCAGCTTGCTCCTGGGGCTaGGTTCTCCAGGGCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PCVRLTPQCPLHLELRWPACSWG*VLQGQA Trigger: TGCCTGGCCCTGGAGAACCAAGCCCCAGGAGCAAGC...TGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS CCA 90 bp | GTTCTCCAGGGCCAGGCAGTGGGCAAGTATCAGGACGCAAAGAGGTaGGCCTGCGTCCCACCTGGTCCGGATCCGGTGCAGGTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLQGQAVGKYQDAKR*ACVPPGPDPVQVQV Trigger: GACCTGCACCTGCACCGGATCCGGACCAGGTGGGACGCAGGCCCACCTCTTTGCGTCCTGATACTTGCCCACTGCCTGGCCCTGGAGAAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS CCA 90 bp | CCCGTCCTGCTTGCTCCTGGGGCTTGGTTCTCCAGGGCCAGGCAGTaGGCAAGTATCAGGACGCAAAGAGGTGGGCCTGCGTCCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVLLAPGAWFSRARQ*ASIRTQRGGPASHL Trigger: CAGGTGGGACGCAGGCCCACCTCTTTGCGTCCTGATACTTGCCCACTGCCTGGCCCTGGAGAACCAAGCCCCAGGAGCAAGCAGGACGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS GCA 90 bp | GCCCCTCTGCTCAGCTTGCCATGGAAGCACTCCTCGTCCCACAGCTaGTGCCTAATGTGTGGCAAAGCGAGTGCGCTCCCAGGCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: APLLSLPWKHSSSHS*CLMCGKASALPGLA Trigger: GGCCAAGCCTGGGAGCGCACTCGCTTTGCCACACATTAGGCAGCAGCTGTGGGACGAGGAGTGCTTCCATGGCAAGCTGAGCAGAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS GCA 90 bp | CCTCTGCTCAGCTTGCCATGGAAGCACTCCTCGTCCCACAGCTGCTaGCTAATGTGTGGCAAAGCGAGTGCGCTCCCAGGCTTGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLSLPWKHSSSHSC*LMCGKASALPGLAV Trigger: CACGGCCAAGCCTGGGAGCGCACTCGCTTTGCCACACATTAGGCAGCAGCTGTGGGACGAGGAGTGCTTCCATGGCAAGCTGAGCAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS GCA 90 bp | AAGAGATCCACTCTCCAGAAGTGCCTCAGCGATGGTGTGTCACCCTaGCCCGCTCTCTCGTGCGGGATACCTATTGGCCTGCTCCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KRSTLQKCLSDGVSP*PALSCGIPIGLLRP Trigger: GGGACGGAGCAGGCCAATAGGTATCCCGCACGAGAGAGCGGGGCAGGGTGACACACCATCGCTGAGGCACTTCTGGAGAGTGGATCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS CCA 90 bp | GCAGGGGTCGTCAAAGAGATCCACTCTCCAGAAGTGCCTCAGCGATaGTGTGTCACCCTGCCCCGCTCTCTCGTGCGGGATACCTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGVVKEIHSPEVPQR*CVTLPRSLVRDTYW Trigger: CCAATAGGTATCCCGCACGAGAGAGCGGGGCAGGGTGACACACCATCGCTGAGGCACTTCTGGAGAGTGGATCTCTTTGACGACCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | CCATGCGTGCGGCTCACACCACAGTGCCCCCTGCATCTGGAACTCCGCTGGCCATGGCACGCTCGTTGGTaGACTGGATCTTTAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: PCVRLTPQCPLHLELRWPWHARW*TGSLAT Trigger: TGTAGCTAAAGATCCAGTCAACCAACGAGCGTGCCA...TGGCCAGCGGAGTTCCAGATGCAGGGGGCACTGTGGTGTGAGCCGCACGCATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS TCA 90 bp | CCTTGTTTCCAACGGAGCCTCCGGGGCTCCCTTCGTCCAAAGACGTaGTGGACTCGTTCCGAAAGCGGCTGTACTTGGTCCTGTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PCFQRSLRGSLRPKT*WTRSESGCTWSCEA Trigger: TGCTTCACAGGACCAAGTACAGCCGCTTTCGGAACGAGTCCATCACGTCTTTGGACGAAGGGAGCCCCGGAGGCTCCGTTGGAAACAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS TCA 90 bp | GCAGTATGCCATTTGGTCTGTAGCTTGAGCCTGGATGCGCACATCTaGAATGCCGCCTTCAGGTGGCTGCTTCCCCGGGATGGAGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: AVCHLVCSLSLDAHI*NAAFRWLLPRDGVV Trigger: TACAACTCCATCCCGGGGAAGCAGCCACCTGAAGGCGGCATTTCAGATGTGCGCATCCAGGCTCAAGCTACAGACCAAATGGCATACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS CCA 90 bp | TTGAACCGGAGTTCAAAGGCCTGCCCTATGGTGCTTATGACGTCTTaGGCCATTCCACTGCGACACTCCAGTATGTGGCACGCTCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LNRSSKACPMVLMTS*AIPLRHSSMWHARW Trigger: CCAACGAGCGTGCCACATACTGGAGTGTCGCAGTGGAATGGCCCAAGACGTCATAAGCACCATAGGGCAGGCCTTTGAACTCCGGTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS CCA 90 bp | TCCTTCACCAAAAGTTTCTCCGCTGCCCCTCTGCTCAGCTTGCCATaGAAGCACTCCTCGTCCCACAGCTGCTGCCTAATGTGTGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SFTKSFSAAPLLSLP*KHSSSHSCCLMCGK Trigger: TTTGCCACACATTAGGCAGCAGCTGTGGGACGAGGAGTGCTTCCATGGCAAGCTGAGCAGAGGGGCAGCGGAGAAACTTTTGGTGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS CCA 90 bp | TGCGCACATCTGAAATGCCGCCTTCAGGTGGCTGCTTCCCCGGGATaGAGTTGTAATAGTCATGGTCTCTGTCTTCAGGGGCACCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: CAHLKCRLQVAASPG*SCNSHGLCLQGHHQ Trigger: TTGATGGTGCCCCTGAAGACAGAGACCATGACTATTACAACTCCATCCCGGGGAAGCAGCCACCTGAAGGCGGCATTTCAGATGTGCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTAGTGCGCTCCCAGGCTaGGCCGTGGCTCCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLWRSKKDMFHSLCSTLCSALPG*AVAPGC Trigger: GCAGCCTGGAGCCACGGCCAAGCCTGGGAGCGCACT...ACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS TCA 90 bp | AAAGACGTGATGGACTCGTTCCGAAAGCGGCTGTACTTGGTCCTGTaGAGCATCCCCAGGTGCCCAAAGAGTCCTACATACAGCGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KDVMDSFRKRLYLVL*SIPRCPKSPTYSVS Trigger: ACTCACGCTGTATGTAGGACTCTTTGGGCACCTGGGGATGCTTCACAGGACCAAGTACAGCCGCTTTCGGAACGAGTCCATCACGTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS TCA 90 bp | AACTTTTCACACCGGATAGGGCAGTATGCCATTTGGTCTGTAGCTTaGGCCTGGATGCGCACATCTGAAATGCCGCCTTCAGGTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NFSHRIGQYAIWSVA*AWMRTSEMPPSGGC Trigger: GCAGCCACCTGAAGGCGGCATTTCAGATGTGCGCATCCAGGCTCAAGCTACAGACCAAATGGCATACTGCCCTATCCGGTGTGAAAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS GCA 90 bp | TACCTATTGGCCTGCTCCGTCCCATACAGTTCTTATACACACCGCTaGACGTGGAGTTCCCAGGCAAATAGCACAACTTTTCACACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: YLLACSVPYSSYTHR*TWSSQANSTTFHTG Trigger: TCCGGTGTGAAAAGTTGTGCTATTTGCCTGGGAACTCCACGTGCAGCGGTGTGTATAAGAACTGTATGGGACGGAGCAGGCCAATAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | CGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTGAAGAAAAGAGTGCGCTCCCAGGCTaGGCCGTGGCTCCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSKKDMFHSLCSTLCEEKSALPG*AVAPGC Trigger: GCAGCCTGGAGCCACGGCCAAGCCTGGGAGCGCACT...CTTTTCTTCACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | TTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTCACCAATGCAATGTGACCAGTGCGCTCCCAGGCTaGGCCGTGGCTCCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LASEIEVVLLAFHQCNVTSALPG*AVAPGC Trigger: GCAGCCTGGAGCCACGGCCAAGCCTGGGAGCGCACT...GGTCACATTGCATTGGTGAAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | AACTGGAATCCAGACAGGTTTAGCGACCTGCCAAGACTCACAGTGGTGAATAGTCTTGGCCTGGCCACCTaGCAGTCCACTCAGTACAAA | + |
|
Preference number: 5 (lower is better) Translates to: NWNPDRFSDLPRLTVVNSLGLAT*QSTQYK Trigger: TTTGTACTGAGTGGACTGCAAGGTGGCCAGGCCAAG...ACTATTCACCACTGTGAGTCTTGGCAGGTCGCTAAACCTGTCTGGATTCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS CCA 90 bp | CATTCCACTGCGACACTCCAGTATGTGGCACGCTCGTTGGTTGACTaGATCTTTAGCTACATAGGCAACATAGTCTGTGGTATCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HSTATLQYVARSLVD*IFSYIGNIVCGIRV Trigger: GACCCTGATACCACAGACTATGTTGCCTATGTAGCTAAAGATCCAGTCAACCAACGAGCGTGCCACATACTGGAGTGTCGCAGTGGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS GCA 90 bp | AAGGAAGGATTTTTCAAGTACTGTTTGAACCGGAGTTCAAAGGCCTaGCCTATGGTGCTTATGACGTCTTGGGCCATTCCACTGCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: KEGFFKYCLNRSSKA*PMVLMTSWAIPLRH Trigger: GTGTCGCAGTGGAATGGCCCAAGACGTCATAAGCACCATAGGGCAGGCCTTTGAACTCCGGTTCAAACAGTACTTGAAAAATCCTTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAGTTCAAGTTGTCTTTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTGGGGGCCCGTCCTGCTaGCTCCTGGGGCTTGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EQFKLSLASEIEVVLLAFGGPSC*LLGLGS Trigger: AGAACCAAGCCCCAGGAGCAAGCAGGACGGGCCCCC...AAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAAAGACAACTTGAACTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS TCA 90 bp | TTTGATTTCCAGCATAGCTGTGCATACTCTGAAGAGCCTGTGTATTaGCATAGCAGGGGTCGTCAAAGAGATCCACTCTCCAGAAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FDFQHSCAYSEEPVY*HSRGRQRDPLSRSA Trigger: GGCACTTCTGGAGAGTGGATCTCTTTGACGACCCCTGCTATGTCAATACACAGGCTCTTCAGAGTATGCACAGCTATGCTGGAAATCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTTGGCCTGGCCACCTaGCAGTCCACTCAGTACAAA | + |
|
Preference number: 5 (lower is better) Translates to: IKDLVCGGLRKTCFTVYVLGLAT*QSTQYK Trigger: TTTGTACTGAGTGGACTGCAAGGTGGCCAGGCCAAG...AACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | GACCTCCGTGCAGATGAGTATCGCATTTCCAAATGGACCAAAATTATTATTCTCACCAAGAGAAGATGCTaGGCCTGGCCACCTTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DLRADEYRISKWTKIIILTKRRC*AWPPCS Trigger: ACTGCAAGGTGGCCAGGCCAAGCATCTTCTCTTGGT...GAGAATAATAATTTTGGTCCATTTGGAAATGCGATACTCATCTGCACGGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCCTGTAGTGACTGTATCTTTATATGCATAGGCTCAAACACATGGTCCTaGGTCCTCACCTTGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLSLSLSCSDCIFICIGSNTWS*VLTLPS Trigger: AGAAGGCAAGGTGAGGACCAAGGACCATGTGTTTGA...GCCTATGCATATAAAGATACAGTCACTACAGGAGAGAGAGAGAGAGAGAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCTGAATTTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTCTGATCCTGGTTCTCTaGGAGCTTCAACCGGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: QSEFDVSVIVNMAAKSATLILVL*ELQPAH Trigger: GTGAGCCGGTTGAAGCTCCAAGAGAACCAGGATCAG...AGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAAATTCAGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CAA 90 bp | CGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTGAAGAAAAGTGGCCAGCTTCATGCTaGCCATACGGGGAATCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSKKDMFHSLCSTLCEEKWPASC*PYGESR Trigger: CCTTGATTCCCCGTATGGCAAGCATGAAGCTGGCCA...CTTTTCTTCACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CAA 90 bp | TTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTGGTGCTTATGACGTCTaGGGCCATTCCACTGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: LLLCFIKDLVCGGLRKTCGAYDV*GHSTAT Trigger: TGTCGCAGTGGAATGGCCCAAGACGTCATAAGCACC...ACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAGATAGTTTGTTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTGGTGCTTATGACGTCTaGGGCCATTCCACTGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: SEDSLLLLCFIKDLVCGGGAYDV*GHSTAT Trigger: TGTCGCAGTGGAATGGCCCAAGACGTCATAAGCACC...ACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAACAAACTATCTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | TTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTCACCAATGCAATGTGACCTCCTTGGTCCTCACCTaGCCTTCTGGATCCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LASEIEVVLLAFHQCNVTSLVLT*PSGSTK Trigger: CTTGGTGGATCCAGAAGGCAAGGTGAGGACCAAGGA...GGTCACATTGCATTGGTGAAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAGATAGTTTGTTACTTCTATGTTTTATAAAAGACCTGGTCTGTGGCGGTTCCTTGGTCCTCACCTaGCCTTCTGGATCCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SEDSLLLLCFIKDLVCGGSLVLT*PSGSTK Trigger: CTTGGTGGATCCAGAAGGCAAGGTGAGGACCAAGGA...ACCGCCACAGACCAGGTCTTTTATAAAACATAGAAGTAACAAACTATCTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | GACCTCCGTGCAGATGAGTATCGCATTTCCAAATGGACCAAAATTATTATTCTCTCAAACACATGGTCCTaGGTCCTCACCTTGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DLRADEYRISKWTKIIILSNTWS*VLTLPS Trigger: AGAAGGCAAGGTGAGGACCAAGGACCATGTGTTTGA...GAGAATAATAATTTTGGTCCATTTGGAAATGCGATACTCATCTGCACGGAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGGGTGCTTATGACGTCTaGGGCCATTCCACTGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMGAYDV*GHSTAT Trigger: TGTCGCAGTGGAATGGCCCAAGACGTCATAAGCACC...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCCTGTAGTGACTGTATCTTTATATGCATAGGCTTTTTCAAGTACTGTTaGAACCGGAGTTCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSLSLSLSCSDCIFICIGFFKYC*NRSSKA Trigger: GGCCTTTGAACTCCGGTTCAAACAGTACTTGAAAAA...GCCTATGCATATAAAGATACAGTCACTACAGGAGAGAGAGAGAGAGAGAGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGCTTGGCCTGGCCACCTaGCAGTCCACTCAGTACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMLGLAT*QSTQYK Trigger: TTTGTACTGAGTGGACTGCAAGGTGGCCAGGCCAAG...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS-3UTR CAA 90 bp | ACTGAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTAACCAAGAGAAGATGCTaGGCCTGGCCACCTTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TEAFLLLLKTTRSTKPTLTKRRC*AWPPCS Trigger: ACTGCAAGGTGGCCAGGCCAAGCATCTTCTCTTGGT...TAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGACCAAGAGAAGATGCTaGGCCTGGCCACCTTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMTKRRC*AWPPCS Trigger: ACTGCAAGGTGGCCAGGCCAAGCATCTTCTCTTGGT...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | ACACTACTAGTCAAAATGCTGCTTCTTGCTGTTTTTAGCAAGGAAGAACTTTTTAGAAAAGTGATGGGGTaGGCCAGCTTCATGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLLVKMLLLAVFSKEELFRKVMG*ASFMLA Trigger: GGCAAGCATGAAGCTGGCCAACCCCATCACTTTTCT...AAAAAGTTCTTCCTTGCTAAAAACAGCAAGAAGCAGCATTTTGACTAGTAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CAA 90 bp | CGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTGAAGAAAAGTGGCACGCTCGTTGGTaGACTGGATCTTTAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: RSKKDMFHSLCSTLCEEKWHARW*TGSLAT Trigger: TGTAGCTAAAGATCCAGTCAACCAACGAGCGTGCCA...CTTTTCTTCACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | ATAAAAGACCTGGTCTGTGGCGGTCTAAGAAAGACATGTTTCACAGTCTATGTTTGCTTCCCTTGTAACTaGGGTTCTCATTCCAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: IKDLVCGGLRKTCFTVYVCFPCN*GSHSKI Trigger: GATTTTGGAATGAGAACCCAAGTTACAAGGGAAGCA...AACATAGACTGTGAAACATGTCTTTCTTAGACCGCCACAGACCAGGTCTTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CAA 90 bp | TTGATGTCAGTGTCATTGTTAACATGGCAGCAAAAAGTGCTACTAAACAAAATGTGGCACGCTCGTTGGTaGACTGGATCTTTAGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: LMSVSLLTWQQKVLLNKMWHARW*TGSLAT Trigger: TGTAGCTAAAGATCCAGTCAACCAACGAGCGTGCCA...CATTTTGTTTAGTAGCACTTTTTGCTGCCATGTTAACAATGACACTGACATCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTACCTAATCCAGTGACCTCATaGATTGCAGCACTTCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: EAFLLLLKTTRSTKPTLPNPVTS*IAALQC Trigger: GCATTGAAGTGCTGCAATCAATGAGGTCACTGGATT...AGGTAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS-3UTR CAA 90 bp | CGGTCTAAGAAAGACATGTTTCACAGTCTATGTTCTACTTTGTGTGAAGAAAAGTTTTTCAAGTACTGTTaGAACCGGAGTTCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSKKDMFHSLCSTLCEEKFFKYC*NRSSKA Trigger: GGCCTTTGAACTCCGGTTCAAACAGTACTTGAAAAA...CTTTTCTTCACACAAAGTAGAACATAGACTGTGAAACATGTCTTTCTTAGACCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCATTTCTGCTATTACTAAAGACAACCAGATCCACTAAACCAACATTACCTTTTTTCAAGTACTGTTaGAACCGGAGTTCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EAFLLLLKTTRSTKPTLPFFKYC*NRSSKA Trigger: GGCCTTTGAACTCCGGTTCAAACAGTACTTGAAAAA...AGGTAATGTTGGTTTAGTGGATCTGGTTGTCTTTAGTAATAGCAGAAATGCTTC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000042246.14 ENSMUST00000110480.8 |
||
| CDS-3UTR CAA 90 bp | TTAGCATCTGAAATTGAAGTTGTGCTTTTAGCTTTTCACCAATGCAATGTGACCATTTGCAATAATCTGTaGGTTGTCAAGGTTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LASEIEVVLLAFHQCNVTICNNL*VVKVHQ Trigger: CTGATGAACCTTGACAACCAACAGATTATTGCAAAT...GGTCACATTGCATTGGTGAAAAGCTAAAAGCACAACTTCAATTTCAGATGCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS CCA 72 bp | TGCACAGCGCCGTGGGGCTCTCCTGGCTGGACACAGTaGCATCCTCAGTCGGCAGGTGAGGGGCCAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CTAPWGSPGWTQ*HPQSAGEGPGL Trigger: CAGCCCTGGCCCCTCACCTGCCGACTGAGGATGCCACTGTGTCCAGCCAGGAGAGCCCCACGGCGCTGTGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS CCA 72 bp | GAATCAAGGTGCACAGCGCCGTGGGGCTCTCCTGGCTaGACACAGTGGCATCCTCAGTCGGCAGGTGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ESRCTAPWGSPG*TQWHPQSAGEG Trigger: CCCCTCACCTGCCGACTGAGGATGCCACTGTGTCCAGCCAGGAGAGCCCCACGGCGCTGTGCACCTTGATTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS CCA 72 bp | GTATCAGGACGCAAAGAGGTGGGCCTGCGTCCCACCTaGTCCGGATCCGGTGCAGGTGCAGGTCCAGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSGRKEVGLRPT*SGSGAGAGPVL Trigger: CAGGACTGGACCTGCACCTGCACCGGATCCGGACCAGGTGGGACGCAGGCCCACCTCTTTGCGTCCTGATAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS CCA 72 bp | CTTGCTCCTGGGGCTTGGTTCTCCAGGGCCAGGCAGTaGGCAAGTATCAGGACGCAAAGAGGTGGGCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LAPGAWFSRARQ*ASIRTQRGGPA Trigger: CGCAGGCCCACCTCTTTGCGTCCTGATACTTGCCCACTGCCTGGCCCTGGAGAACCAAGCCCCAGGAGCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS CCA 72 bp | GAAGCACTCCTCGTCCCACAGCTGCTGCCTAATGTGTaGCAAAGCGAGTGCGCTCCCAGGCTTGGCCGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EALLVPQLLPNV*QSECAPRLGRG Trigger: GCCACGGCCAAGCCTGGGAGCGCACTCGCTTTGCCACACATTAGGCAGCAGCTGTGGGACGAGGAGTGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS CAA 90 bp | CACAGCTGCTGCCTAATGTGTGGCAAAGCGAGTGCGCTCCCAGGCTaGGCCGTGGCTCCAGGCTGCACAGTTTCTGGTGCCTTTCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HSCCLMCGKASALPG*AVAPGCTVSGAFPR Trigger: CCTCGGAAAGGCACCAGAAACTGTGCAGCCTGGAGCCACGGCCAAGCCTGGGAGCGCACTCGCTTTGCCACACATTAGGCAGCAGCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS GCA 72 bp | TGGCCAGCTTCATGCTTGCCATACGGGGAATCAAGGTaGACAGCGCCGTGGGGCTCTCCTGGCTGGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: WPASCLPYGESR*TAPWGSPGWTQ Trigger: CTGTGTCCAGCCAGGAGAGCCCCACGGCGCTGTGCACCTTGATTCCCCGTATGGCAAGCATGAAGCTGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS CCA 72 bp | TGTGTGGCAAAGCGAGTGCGCTCCCAGGCTTGGCCGTaGCTCCAGGCTGCACAGTTTCTGGTGCCTTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: CVAKRVRSQAWP*LQAAQFLVPFR Trigger: TCGGAAAGGCACCAGAAACTGTGCAGCCTGGAGCCACGGCCAAGCCTGGGAGCGCACTCGCTTTGCCACACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS CAA 72 bp | TGCCTAATGTGTGGCAAAGCGAGTGCGCTCCCAGGCTaGGCCGTGGCTCCAGGCTGCACAGTTTCTGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CLMCGKASALPG*AVAPGCTVSGA Trigger: GGCACCAGAAACTGTGCAGCCTGGAGCCACGGCCAAGCCTGGGAGCGCACTCGCTTTGCCACACATTAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS TCA 72 bp | CAACGGAGCCTCCGGGGCTCCCTTCGTCCAAAGACGTaGTGGACTCGTTCCGAAAGCGGCTGTACTTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QRSLRGSLRPKT*WTRSESGCTWS Trigger: GGACCAAGTACAGCCGCTTTCGGAACGAGTCCATCACGTCTTTGGACGAAGGGAGCCCCGGAGGCTCCGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
||
| CDS GCA 72 bp | ACTCTCCAGAAGTGCCTCAGCGATGGTGTGTCACCCTaGCCCGCTCTCTCGTGCGGGATACCTATTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TLQKCLSDGVSP*PALSCGIPIGL Trigger: CAGGCCAATAGGTATCCCGCACGAGAGAGCGGGGCAGGGTGACACACCATCGCTGAGGCACTTCTGGAGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
||
| CDS GCA 72 bp | AGCTTGCCATGGAAGCACTCCTCGTCCCACAGCTGCTaGCTAATGTGTGGCAAAGCGAGTGCGCTCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SLPWKHSSSHSC*LMCGKASALPG Trigger: GCCTGGGAGCGCACTCGCTTTGCCACACATTAGGCAGCAGCTGTGGGACGAGGAGTGCTTCCATGGCAAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS GCA 72 bp | CTCAGCTTGCCATGGAAGCACTCCTCGTCCCACAGCTaGTGCCTAATGTGTGGCAAAGCGAGTGCGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LSLPWKHSSSHS*CLMCGKASALP Trigger: TGGGAGCGCACTCGCTTTGCCACACATTAGGCAGCAGCTGTGGGACGAGGAGTGCTTCCATGGCAAGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS GCA 72 bp | TCACCAAAAGTTTCTCCGCTGCCCCTCTGCTCAGCTTaGCATGGAAGCACTCCTCGTCCCACAGCTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SPKVSPLPLCSA*HGSTPRPTAAA Trigger: GGCAGCAGCTGTGGGACGAGGAGTGCTTCCATGGCAAGCTGAGCAGAGGGGCAGCGGAGAAACTTTTGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CCA 72 bp | GTCAAAGAGATCCACTCTCCAGAAGTGCCTCAGCGATaGTGTGTCACCCTGCCCCGCTCTCTCGTGCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: VKEIHSPEVPQR*CVTLPRSLVRD Trigger: ATCCCGCACGAGAGAGCGGGGCAGGGTGACACACCATCGCTGAGGCACTTCTGGAGAGTGGATCTCTTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CAA 72 bp | TTCACCAAAAGTTTCTCCGCTGCCCCTCTGCTCAGCTaGCCATGGAAGCACTCCTCGTCCCACAGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FTKSFSAAPLLS*PWKHSSSHSCC Trigger: GCAGCAGCTGTGGGACGAGGAGTGCTTCCATGGCAAGCTGAGCAGAGGGGCAGCGGAGAAACTTTTGGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS TCA 72 bp | CATTTGGTCTGTAGCTTGAGCCTGGATGCGCACATCTaGAATGCCGCCTTCAGGTGGCTGCTTCCCCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: HLVCSLSLDAHI*NAAFRWLLPRD Trigger: ATCCCGGGGAAGCAGCCACCTGAAGGCGGCATTTCAGATGTGCGCATCCAGGCTCAAGCTACAGACCAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS GCA 72 bp | GGATCCACCAAGAGAAGATGCTTGGCCTGGCCACCTTaGAGTCCACTCAGTACAAACTGGCCGGGAGATGTC | + |
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Preference number: 6 (lower is better) Translates to: GSTKRRCLAWPP*SPLSTNWPGDV Trigger: GACATCTCCCGGCCAGTTTGTACTGAGTGGACTGCAAGGTGGCCAGGCCAAGCATCTTCTCTTGGTGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CCA 72 bp | GATCCGGTGCAGGTGCAGGTCCAGTCCTGTTTAGATTaGATTCTGGGGACGCTGGACGGCTTGGAGTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: DPVQVQVQSCLD*ILGTLDGLESD Trigger: ATCAGACTCCAAGCCGTCCAGCGTCCCCAGAATCCAATCTAAACAGGACTGGACCTGCACCTGCACCGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
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| CDS CCA 72 bp | AAAAGTTTCTCCGCTGCCCCTCTGCTCAGCTTGCCATaGAAGCACTCCTCGTCCCACAGCTGCTGCCTAATG | + |
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Preference number: 6 (lower is better) Translates to: KSFSAAPLLSLP*KHSSSHSCCLM Trigger: CATTAGGCAGCAGCTGTGGGACGAGGAGTGCTTCCATGGCAAGCTGAGCAGAGGGGCAGCGGAGAAACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CCA 72 bp | CTGAAATGCCGCCTTCAGGTGGCTGCTTCCCCGGGATaGAGTTGTAATAGTCATGGTCTCTGTCTTCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LKCRLQVAASPG*SCNSHGLCLQG Trigger: CCCCTGAAGACAGAGACCATGACTATTACAACTCCATCCCGGGGAAGCAGCCACCTGAAGGCGGCATTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CAA 90 bp | TTTGAACCGGAGTTCAAAGGCCTGCCCTATGGTGCTTATGACGTCTaGGGCCATTCCACTGCGACACTCCAGTATGTGGCACGCTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: FEPEFKGLPYGAYDV*GHSTATLQYVARSL Trigger: CAACGAGCGTGCCACATACTGGAGTGTCGCAGTGGAATGGCCCAAGACGTCATAAGCACCATAGGGCAGGCCTTTGAACTCCGGTTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS TCA 72 bp | ATGGACTCGTTCCGAAAGCGGCTGTACTTGGTCCTGTaGAGCATCCCCAGGTGCCCAAAGAGTCCTACATAC | + |
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Preference number: 6 (lower is better) Translates to: MDSFRKRLYLVL*SIPRCPKSPTY Trigger: GTATGTAGGACTCTTTGGGCACCTGGGGATGCTTCACAGGACCAAGTACAGCCGCTTTCGGAACGAGTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
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| CDS CCA 72 bp | AGTTCAAAGGCCTGCCCTATGGTGCTTATGACGTCTTaGGCCATTCCACTGCGACACTCCAGTATGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SSKACPMVLMTS*AIPLRHSSMWH Trigger: GTGCCACATACTGGAGTGTCGCAGTGGAATGGCCCAAGACGTCATAAGCACCATAGGGCAGGCCTTTGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CCA 72 bp | TTGGCCTGGCCACCTTGCAGTCCACTCAGTACAAACTaGCCGGGAGATGTCACACTCTCTCGAACCAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LAWPPCSPLSTN*PGDVTLSRTKK Trigger: CTTTTTGGTTCGAGAGAGTGTGACATCTCCCGGCCAGTTTGTACTGAGTGGACTGCAAGGTGGCCAGGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CAA 72 bp | GAGTTCAAAGGCCTGCCCTATGGTGCTTATGACGTCTaGGGCCATTCCACTGCGACACTCCAGTATGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: EFKGLPYGAYDV*GHSTATLQYVA Trigger: TGCCACATACTGGAGTGTCGCAGTGGAATGGCCCAAGACGTCATAAGCACCATAGGGCAGGCCTTTGAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CAA 72 bp | TCCTGTTTAGATTGGATTCTGGGGACGCTGGACGGCTaGGAGTCTGATCCTGGTTCTCTTGGAGCTTCAACC | + |
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Preference number: 6 (lower is better) Translates to: SCLDWILGTLDG*ESDPGSLGAST Trigger: GGTTGAAGCTCCAAGAGAACCAGGATCAGACTCCAAGCCGTCCAGCGTCCCCAGAATCCAATCTAAACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042246.14 |
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| CDS TCA 72 bp | CAGCATAGCTGTGCATACTCTGAAGAGCCTGTGTATTaGCATAGCAGGGGTCGTCAAAGAGATCCACTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QHSCAYSEEPVY*HSRGRQRDPLS Trigger: GGAGAGTGGATCTCTTTGACGACCCCTGCTATGTCAATACACAGGCTCTTCAGAGTATGCACAGCTATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS GCA 72 bp | CAAATAGCACAACTTTTCACACCGGATAGGGCAGTATaGCATTTGGTCTGTAGCTTGAGCCTGGATGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: QIAQLFTPDRAV*HLVCSLSLDAH Trigger: GTGCGCATCCAGGCTCAAGCTACAGACCAAATGGCATACTGCCCTATCCGGTGTGAAAAGTTGTGCTATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CCA 72 bp | TCCGTCCCATACAGTTCTTATACACACCGCTGCACGTaGAGTTCCCAGGCAAATAGCACAACTTTTCACACC | + |
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Preference number: 6 (lower is better) Translates to: SVPYSSYTHRCT*SSQANSTTFHT Trigger: GGTGTGAAAAGTTGTGCTATTTGCCTGGGAACTCCACGTGCAGCGGTGTGTATAAGAACTGTATGGGACGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CAA 72 bp | CCAACATTATCAAACACATGGTCCTTGGTCCTCACCTaGCCTTCTGGATCCACCAAGAGAAGATGCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PTLSNTWSLVLT*PSGSTKRRCLA Trigger: GGCCAAGCATCTTCTCTTGGTGGATCCAGAAGGCAAGGTGAGGACCAAGGACCATGTGTTTGATAATGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CAA 90 bp | TCCTCCCTTTCCCAAGTGTTCAAGGAAGGATTTTTCAAGTACTGTTaGAACCGGAGTTCAAAGGCCTGCCCTATGGTGCTTATGACGTCT | + |
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Preference number: 6 (lower is better) Translates to: SSLSQVFKEGFFKYC*NRSSKACPMVLMTS Trigger: AGACGTCATAAGCACCATAGGGCAGGCCTTTGAACTCCGGTTCAAACAGTACTTGAAAAATCCTTCCTTGAACACTTGGGAAAGGGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS GCA 72 bp | TTTTTCAAGTACTGTTTGAACCGGAGTTCAAAGGCCTaGCCTATGGTGCTTATGACGTCTTGGGCCATTCCA | + |
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Preference number: 6 (lower is better) Translates to: FFKYCLNRSSKA*PMVLMTSWAIP Trigger: TGGAATGGCCCAAGACGTCATAAGCACCATAGGGCAGGCCTTTGAACTCCGGTTCAAACAGTACTTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CCA 72 bp | TGGTATTTGATAAGGTGGCCAACATTATCAAACACATaGTCCTTGGTCCTCACCTTGCCTTCTGGATCCACC | + |
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Preference number: 6 (lower is better) Translates to: WYLIRWPTLSNT*SLVLTLPSGST Trigger: GGTGGATCCAGAAGGCAAGGTGAGGACCAAGGACCATGTGTTTGATAATGTTGGCCACCTTATCAAATACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS TCA 72 bp | CCCAAGTGTTCAAGGAAGGATTTTTCAAGTACTGTTTaGACCGGAGTTCAAAGGCCTGCCCTATGGTGCTTA | + |
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Preference number: 6 (lower is better) Translates to: PKCSRKDFSSTV*TGVQRPALWCL Trigger: TAAGCACCATAGGGCAGGCCTTTGAACTCCGGTTCAAACAGTACTTGAAAAATCCTTCCTTGAACACTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CAA 72 bp | TCCCAAGTGTTCAAGGAAGGATTTTTCAAGTACTGTTaGAACCGGAGTTCAAAGGCCTGCCCTATGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SQVFKEGFFKYC*NRSSKACPMVL Trigger: AAGCACCATAGGGCAGGCCTTTGAACTCCGGTTCAAACAGTACTTGAAAAATCCTTCCTTGAACACTTGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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| CDS CAA 72 bp | GGGCAAAAGTCCTGTGTTATCATATTTTCTTATTGGTaGTTTAAGGCGTACTTCACTTCCAGAAGAGATGAT | + |
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Preference number: 6 (lower is better) Translates to: GQKSCVIIFSYW*FKAYFTSRRDD Trigger: ATCATCTCTTCTGGAAGTGAAGTACGCCTTAAACAACCAATAAGAAAATATGATAACACAGGACTTTTGCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042246.14 ENSMUST00000110477.2 ENSMUST00000110480.8 |
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