Pregenerated sensors for SHC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021448Ensembl transcript IDs: ENSMUST00000021898.6, ENSMUST00000223543.3, ENSMUST00000239056.2
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTaGTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GGWGAGQAQGFLSTG*WRQSSLPAETMGRL Trigger: CAGCCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| 3UTR CCA 90 bp | GTATGGGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTaGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: VWGLGRWASSGFPLH*LLETKLTPGRDNGQ Trigger: CTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCCCATAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| 3UTR CCA 90 bp | GCCCAGGTCTTCCTGACCTGGCATAAGGTATGGGGGCTGGGGCGCTaGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAG | + |
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Preference number: 1 (lower is better) Translates to: AQVFLTWHKVWGLGR*ASSGFPLHWLLETK Trigger: CTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCCCATACCTTATGCCAGGTCAGGAAGACCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| 3UTR CAA 90 bp | TGGGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTaGCTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: WGLGRWASSGFPLHW*LETKLTPGRDNGQA Trigger: AGCCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGACCTGGCATAAGGTATaGGGGCTGGGGCGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRTWHKV*GLGRWA Trigger: TGCCCAGCGCCCCAGCCCCCATACCTTATGCCAGGT...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCACCTGGCATAAGGTATaGGGGCTGGGGCGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSTWHKV*GLGRWA Trigger: TGCCCAGCGCCCCAGCCCCCATACCTTATGCCAGGT...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGACCTGGCATAAGGTATaGGGGCTGGGGCGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GQAQGFLSTGCWRQSSLPTWHKV*GLGRWA Trigger: TGCCCAGCGCCCCAGCCCCCATACCTTATGCCAGGT...CGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| 3UTR TCA 72 bp | GATGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTaGGAGCCGCAGAGCCCAGGTCTTCCTGACCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: DGPTDSCPISIG*EPQSPGLPDLA Trigger: TGCCAGGTCAGGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| 3UTR GCA 72 bp | GGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTaGTGGAGACAAAGCTCACTCCCGGCAGAGACAATG | + |
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Preference number: 3 (lower is better) Translates to: GAGQAQGFLSTG*WRQSSLPAETM Trigger: CATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| 3UTR CCA 72 bp | GCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTaGAGACAAAGCTCACTCCCGGCAGAGACAATGGGC | + |
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Preference number: 3 (lower is better) Translates to: AGQAQGFLSTGC*RQSSLPAETMG Trigger: GCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGCTCCGCCGAGACCTTaGCGCCGCTGCCGCTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRAPPRP*RRCRSP Trigger: CGGTGAGCGGCAGCGGCGGCAAGGTCTCGGCGGAGC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTGGGCGCGCTGCAGCTaGCCGAGAGCCGCGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRWARCS*PRAALL Trigger: CAGGAGCGCGGCTCTCGGGCAGCTGCAGCGCGCCCA...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR TCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCCCGGCCCCAGCACCTaGTCGCTGGTGTGCGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSPGPST*SLVCGA Trigger: CGCGCCGCACACCAGCGATCAGGTGCTGGGGCCGGG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | GGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACGTGGGCTGCTCTCAGTaGTGCTGGTTGCTGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GAGALGKLRVSSPLVAGDVGCSQ*CWLLLA Trigger: GGCCAGCAGCAACCAGCAGCACTGAGAGCAGCCCAC...GTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR GCA 90 bp | CTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGCAGGGCTCCGCCGAGACCTTaGCGCCGCTGCCGCTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: LSTGCWRQSSLPAETMGRAPPRP*RRCRSP Trigger: CGGTGAGCGGCAGCGGCGGCAAGGTCTCGGCGGAGC...CCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | GGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACCCAAGGAGCCTTGCCTaGTGGGTGCTCGCTGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GAGALGKLRVSSPLVAGDPRSLA*WVLAAS Trigger: ACTGGCAGCGAGCACCCACCAGGCAAGGCTCCTTGG...GTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR GCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCATCGTCCGGCGCCTTaGGCAGCGCCTCGCCCGACA | + |
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Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSHRPAP*AAPRPT Trigger: TGTCGGGCGAGGCGCTGCGCAAGGCGCCGGACGATG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | CAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCATGGGCGCGCTGCAGCTaGCCGAGAGCCGCGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QAQGFLSTGCWRQSSLPAWARCS*PRAALL Trigger: CAGGAGCGCGGCTCTCGGGCAGCTGCAGCGCGCCCA...TGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGCTCCTCCAGCATCCTaGCATCCGGGGCTCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRAPPAS*HPGLWV Trigger: CACCCAGAGCCCCGGATGCCAGGATGCTGGAGGAGC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | GGGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGAGGCTCATCCAGACTCTaGATTCGGTCCTGGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GGWGAGQAQGFLSTGCWRGSSRL*IRSWRA Trigger: TGCCCTCCAGGACCGAATGCAGAGTCTGGATGAGCC...TCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGTGGGCTGCTCTCAGTaGTGCTGGTTGCTGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRVGCSQ*CWLLLA Trigger: GGCCAGCAGCAACCAGCAGCACTGAGAGCAGCCCAC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | CTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACATCGTCCGGCGCCTTaGGCAGCGCCTCGCCCGACA | + |
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Preference number: 4 (lower is better) Translates to: LRVSSPLVAGDKAHSRQRHRPAP*AAPRPT Trigger: TGTCGGGCGAGGCGCTGCGCAAGGCGCCGGACGATG...TCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCCAAGGAGCCTTGCCTaGTGGGTGCTCGCTGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRPRSLA*WVLAAS Trigger: ACTGGCAGCGAGCACCCACCAGGCAAGGCTCCTTGG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGCTGCTGGTTGCTGCTaGCCACACCTGTGGTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRAAGCC*PHLWWD Trigger: GTCCCACCACAGGTGTGGCCAGCAGCAACCAGCAGC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGATGTCCAAGGAGCCTTaGCTGGTGGGTGCTCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRMSKEP*LVGARC Trigger: GCAGCGAGCACCCACCAGGCAAGGCTCCTTGGACAT...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGAGTGCTGCTGGTTGCTaGTGGCCACACCTGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRSAAGC*WPHLWW Trigger: CCACCACAGGTGTGGCCAGCAGCAACCAGCAGCACT...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCTCAGTGCTGCTGGTTaGTGCTGGCCACACCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRLSAAG*CWPHLW Trigger: CCACAGGTGTGGCCAGCAGCAACCAGCAGCACTGAG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGGTCCTTCCGTGGGCTaGTCTCAGTGCTGCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRGPSVG*SQCCWL Trigger: CAACCAGCAGCACTGAGAGCAGCCCACGGAAGGACC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGGCTGGCGGTGGAGATaGTCAGGGAGATGCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRGWRWR*SGRCSS Trigger: GGATGAGCATCTCCCTGACCATCTCCACCGCCAGCC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTGCTGGCCACACCTGTaGTGGGACTGGCTGGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRCWPHL*WDWLGV Trigger: AACACCCAGCCAGTCCCACCACAGGTGTGGCCAGCA...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR TCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGCGGCTTTCTCTTCTTaGGGGCTCCTTTGGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRAAFSS*GLLWHL Trigger: CAGGTGCCAAAGGAGCCCTCAAGAAGAGAAAGCCGC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCTGCGAACTGGAGGTTaGTCTTCCCCAGGATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRLRTGG*SSPGCW Trigger: CCAGCATCCTGGGGAAGAGCAACCTCCAGTTCGCAG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGGCTCATCCAGACTCTaGATTCGGTCCTGGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRGSSRL*IRSWRA Trigger: TGCCCTCCAGGACCGAATGCAGAGTCTGGATGAGCC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCGTGGGCTGCTCTCAGTaGTGCTGGTTGCTGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSVGCSQ*CWLLLA Trigger: GGCCAGCAGCAACCAGCAGCACTGAGAGCAGCCCAC...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGAGCAGGTGCTTGGCCTaGCCATTGTGCATGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRSRCLA*PLCMPV Trigger: CACAGGCATGCACAATGGGCAGGCCAAGCACCTGCT...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCTCATCCCTGCGAACTaGAGGTTGCTCTTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRLIPAN*RLLFPR Trigger: CCTGGGGAAGAGCAACCTCCAGTTCGCAGGGATGAG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | GGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACGGGGAGGCATCTTGGTaGGAACGCTGTTGTAGTATG | + |
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Preference number: 4 (lower is better) Translates to: GAGALGKLRVSSPLVAGDGEASW*ERCCSM Trigger: CATACTACAACAGCGTTCCCACCAAGATGCCTCCCC...GTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCCAAGGAGCCTTGCCTaGTGGGTGCTCGCTGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSPRSLA*WVLAAS Trigger: ACTGGCAGCGAGCACCCACCAGGCAAGGCTCCTTGG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | CTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGCAGGGCTGCTGGTTGCTGCTaGCCACACCTGTGGTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LSTGCWRQSSLPAETMGRAAGCC*PHLWWD Trigger: GTCCCACCACAGGTGTGGCCAGCAGCAACCAGCAGC...CCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCACGCAGGCCGGAGCTaGAGAGTTTCAAGTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRHAGRS*RVSSGT Trigger: TGTCCCACTTGAAACTCTCCAGCTCCGGCCTGCGTG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR TCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCGTCCGGGTCTCCCCCTaGGGCAAAAGAGATAGACCG | + |
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Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSVRVSP*GKRDRP Trigger: CGGTCTATCTCTTTTGCCTCAGGGGGAGACCCGGAC...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCAGGAGCGTGGGGTCTaGCTTTCAATCGAGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRQERGV*LSIEHP Trigger: TGGATGCTCGATTGAAAGGCAGACCCCACGCTCCTG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | GGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAGTTTGCTCTTTTCCTaGAAACTGGGCTGCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GAGALGKLRVSSPLVAGDSLLFS*KLGCLR Trigger: CCTGAGGCAGCCCAGTTTGCAGGAAAAGAGCAAACT...GTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR GCA 90 bp | CTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGCAGGCTATGTCCAAGGAGCCTTaGCTGGTGGGTGCTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHWLLETKLTPGRDNGQAMSKEP*LVGARC Trigger: GCAGCGAGCACCCACCAGGCAAGGCTCCTTGGACAT...AGCCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
||
| CDS-3UTR GCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCAGTGCTGCTGGTTGCTaGTGGCCACACCTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSSAAGC*WPHLWW Trigger: CCACCACAGGTGTGGCCAGCAGCAACCAGCAGCACT...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCTCAGTGCTGCTGGTTaGTGCTGGCCACACCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSLSAAG*CWPHLW Trigger: CCACAGGTGTGGCCAGCAGCAACCAGCAGCACTGAG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| CDS-3UTR GCA 90 bp | CTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGCAGGCTGGTCCTTCCGTGGGCTaGTCTCAGTGCTGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHWLLETKLTPGRDNGQAGPSVG*SQCCWL Trigger: CAACCAGCAGCACTGAGAGCAGCCCACGGAAGGACC...AGCCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
||
| CDS-3UTR GCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCGGTCCTTCCGTGGGCTaGTCTCAGTGCTGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSGPSVG*SQCCWL Trigger: CAACCAGCAGCACTGAGAGCAGCCCACGGAAGGACC...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCGGCTCCTTTGGCACCTaGCACAGCTTCGCAGACACG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSGSFGT*HSFADT Trigger: CGTGTCTGCGAAGCTGTGCCAGGTGCCAAAGGAGCC...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCTGCGCAGATTCAGGCTaGCGGTGGAGATGGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSCADSG*RWRWSG Trigger: CCCTGACCATCTCCACCGCCAGCCTGAATCTGCGCA...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCTGGGGGAGGCATCTTaGTGGGAACGCTGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRLGEAS*WERCCS Trigger: ACTACAACAGCGTTCCCACCAAGATGCCTCCCCCAG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTTTCCTGCAAACTaGGCTGCCTCAGGAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRSFPAN*AASGAW Trigger: CCACGCTCCTGAGGCAGCCCAGTTTGCAGGAAAAGA...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCACCTGTGGTGGGACTaGCTGGGTGTTGACATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRHLWWD*LGVDIG Trigger: ACCTATGTCAACACCCAGCCAGTCCCACCACAGGTG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCTGCTGGCCACACCTGTaGTGGGACTGGCTGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSCWPHL*WDWLGV Trigger: AACACCCAGCCAGTCCCACCACAGGTGTGGCCAGCA...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCTCTCCACTGGTTGCTaGAGACAAAGCTCACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRLSTGC*RQSSLP Trigger: CGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCTCACCGACAGGCTGTaGAGAAGGTCATCGACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRLTDRL*RRSSTD Trigger: ATCGGTCGATGACCTTCTCCACAGCCTGTCGGTGAG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGCAGGAAGTGGGACACCTTGTaGAGCAGGTGGCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSTGCWRQSSLPAETMGRKWDTL*SRWPRL Trigger: CAGCCTGGGCCACCTGCTCCACAAGGTGTCCCACTT...CCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCAAGTGGGACACCTTGTaGAGCAGGTGGCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSKWDTL*SRWPRL Trigger: CAGCCTGGGCCACCTGCTCCACAAGGTGTCCCACTT...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| 3UTR CAA 72 bp | GGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTaGCTGGAGACAAAGCTCACTCCCGGCAGAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GRWASSGFPLHW*LETKLTPGRDN Trigger: ATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGCAGGGCGGCTTTCTCTTCTTaGGGGCTCCTTTGGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSTGCWRQSSLPAETMGRAAFSS*GLLWHL Trigger: CAGGTGCCAAAGGAGCCCTCAAGAAGAGAAAGCCGC...CCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
||
| CDS-3UTR TCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCGTCCGATGGAGCCAATaGCATCTTGGGCTAGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSVRWSQ*HLGLAR Trigger: ACGGGCTAGCCCAAGATGTCATTGGCTCCATCGGAC...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTGCTCTTCCCCAGGATaGTGGACAGCATCTTACTCG | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRCSSPG*WTASYS Trigger: CGAGTAAGATGCTGTCCAGCATCCTGGGGAAGAGCA...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCTGCGAACTGGAGGTTaGTCTTCCCCAGGATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSLRTGG*SSPGCW Trigger: CCAGCATCCTGGGGAAGAGCAACCTCCAGTTCGCAG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGAGATGGTCAGGGAGATaGTCATCCCTGCGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRRWSGR*SSLRTG Trigger: TCCAGTTCGCAGGGATGAGCATCTCCCTGACCATCT...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCGTTTGGAGTCAGGAGTaGGCAGATTCAGGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSVWSQE*ADSGWR Trigger: CCGCCAGCCTGAATCTGCGCACTCCTGACTCCAAAC...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | CTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGCAGGCTGTTTGGAGTCAGGAGTaGGCAGATTCAGGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LHWLLETKLTPGRDNGQAVWSQE*ADSGWR Trigger: CCGCCAGCCTGAATCTGCGCACTCCTGACTCCAAAC...AGCCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR GCA 90 bp | TCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACCTCAGTGCTGCTGGTTaGTGCTGGCCACACCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGFPLHWLLETKLTPGRDLSAAG*CWPHLW Trigger: CCACAGGTGTGGCCAGCAGCAACCAGCAGCACTGAG...GTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | CTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCGGCTCCTTTGGCACCTaGCACAGCTTCGCAGACACG | + |
|
Preference number: 4 (lower is better) Translates to: LGKLRVSSPLVAGDKAHSGSFGT*HSFADT Trigger: CGTGTCTGCGAAGCTGTGCCAGGTGCCAAAGGAGCC...GGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCTCATCCCTGCGAACTaGAGGTTGCTCTTCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSLIPAN*RLLFPR Trigger: CCTGGGGAAGAGCAACCTCCAGTTCGCAGGGATGAG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | CAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAGGCTGGCGGTGGAGATaGTCAGGGAGATGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QGFLSTGCWRQSSLPAETGWRWR*SGRCSS Trigger: GGATGAGCATCTCCCTGACCATCTCCACCGCCAGCC...TGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | CTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGATGCGCAGATTCAGGCTaGCGGTGGAGATGGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVSSPLVAGDKAHSRQRCADSG*RWRWSG Trigger: CCCTGACCATCTCCACCGCCAGCCTGAATCTGCGCA...TCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGAGCCAATGACATCTTaGGCTAGCCCGTCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPREPMTS*ASPSQH Trigger: ATGCTGTGACGGGCTAGCCCAAGATGTCATTGGCTC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGGGGAGGCATCTTGGTaGGAACGCTGTTGTAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRGEASW*ERCCSM Trigger: CATACTACAACAGCGTTCCCACCAAGATGCCTCCCC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCTGCTCTCAGTGCTGCTaGTTGCTGCTGGCCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSCSQCC*LLLATP Trigger: AGGTGTGGCCAGCAGCAACCAGCAGCACTGAGAGCA...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCATGGGGCCCAGGGGCTaGTTTCTCAGGGCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSMGPRG*FLRASS Trigger: TGAAGATGCCCTGAGAAACCAGCCCCTGGGCCCCAT...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCTGCTCATCTCTCCTTaGTACCAGGGCTCAGCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRLLISP*YQGSAL Trigger: TAACGCTGAGCCCTGGTACCAAGGAGAGATGAGCAG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCAAAGGAGCCGGGGTTaGTGGTACTCTTCCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRQRSRG*WYSSSL Trigger: TAGTGAGGAAGAGTACCACCAACCCCGGCTCCTTTG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGGGTTTCCTCTCCACTaGTTGCTGGAGACAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRGFPLH*LLETKL Trigger: GAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCTGGAGAGTTTCAAGTaGGACACCTTGTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRLESFK*DTLWSR Trigger: CCTGCTCCACAAGGTGTCCCACTTGAAACTCTCCAG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| CDS-3UTR CCA 90 bp | CTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGCAGGCTCACGCAGGCCGGAGCTaGAGAGTTTCAAGTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LHWLLETKLTPGRDNGQAHAGRS*RVSSGT Trigger: TGTCCCACTTGAAACTCTCCAGCTCCGGCCTGCGTG...AGCCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
||
| CDS-3UTR TCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGTCAAGAGACCTCATTaGGCGCAGAACTTCGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRVKRPH*AQNFDA Trigger: TGCATCGAAGTTCTGCGCTCAATGAGGTCTCTTGAC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACGAGATAGACCGCATATaGTGGTTCGCTATGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GAGALGKLRVSSPLVAGDEIDRI*WFAMIC Trigger: ACAGATCATAGCGAACCATCATATGCGGTCTATCTC...GTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
||
| CDS-3UTR TCA 90 bp | CAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGTCCGATGGAGCCAATaGCATCTTGGGCTAGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QAQGFLSTGCWRQSSLPAVRWSQ*HLGLAR Trigger: ACGGGCTAGCCCAAGATGTCATTGGCTCCATCGGAC...TGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
||
| CDS-3UTR GCA 90 bp | CAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCACTGCGAACTGGAGGTTaGTCTTCCCCAGGATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QAQGFLSTGCWRQSSLPALRTGG*SSPGCW Trigger: CCAGCATCCTGGGGAAGAGCAACCTCCAGTTCGCAG...TGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
||
| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGAGTTTGCTCTTTTCCTaGAAACTGGGCTGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRSLLFS*KLGCLR Trigger: CCTGAGGCAGCCCAGTTTGCAGGAAAAGAGCAAACT...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAAAGTGCTGCTGGTTGCTaGTGGCCACACCTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVSSPLVAGDKAHSRQRQSAAGC*WPHLWW Trigger: CCACCACAGGTGTGGCCAGCAGCAACCAGCAGCACT...TTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCTCATCCCTGCGAACTaGAGGTTGCTCTTCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGKLRVSSPLVAGDKAHSLIPAN*RLLFPR Trigger: CCTGGGGAAGAGCAACCTCCAGTTCGCAGGGATGAG...GGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGAACGCTGTTGTAGTATaGGTGATCAGGGCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRNAVVV*VIRAIS Trigger: GGAGATGGCCCTGATCACCCATACTACAACAGCGTT...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCTGGGGGAGGCATCTTaGTGGGAACGCTGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSLGEAS*WERCCS Trigger: ACTACAACAGCGTTCCCACCAAGATGCCTCCCCCAG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | GGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGTCTTTTCCTGCAAACTaGGCTGCCTCAGGAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQAQGFLSTGCWRQSSLPSFPAN*AASGAW Trigger: CCACGCTCCTGAGGCAGCCCAGTTTGCAGGAAAAGA...CGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCACCTGTGGTGGGACTaGCTGGGTGTTGACATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSHLWWD*LGVDIG Trigger: ACCTATGTCAACACCCAGCCAGTCCCACCACAGGTG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | TTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGTGCTGGCCACACCTGTaGTGGGACTGGCTGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FPLHWLLETKLTPGRDNGCWPHL*WDWLGV Trigger: AACACCCAGCCAGTCCCACCACAGGTGTGGCCAGCA...CCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | CAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACATGCTCTCAGTGCTGCTaGTTGCTGCTGGCCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: QGFLSTGCWRQSSLPAETCSQCC*LLLATP Trigger: AGGTGTGGCCAGCAGCAACCAGCAGCACTGAGAGCA...TGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCAAAGAGGTCCTTCCGTaGGCTGCTCTCAGTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSKEVLP*AALSAA Trigger: AGCAGCACTGAGAGCAGCCCACGGAAGGACCTCTTT...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | GGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGAAAGAGGTCCTTCCGTaGGCTGCTCTCAGTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQAQGFLSTGCWRQSSLPKEVLP*AALSAA Trigger: AGCAGCACTGAGAGCAGCCCACGGAAGGACCTCTTT...CGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCTCTCCACTGGTTGCTaGAGACAAAGCTCACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSLSTGC*RQSSLP Trigger: CGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
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| CDS-3UTR TCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGCTTCCCTGGTAACCTaGGTTCTTGTACTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRASLVT*VLVLKS Trigger: TGACTTCAGTACAAGAACTCAGGTTACCAGGGAAGC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR TCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCTCACCGAGTCATTCCTaGAGCGGTTGTACTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSSPSHS*SGCTWC Trigger: GCACCAAGTACAACCGCTTCAGGAATGACTCGGTGA...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCTGCTCTTCCCCAGGATaGTGGACAGCATCTTACTCG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSCSSPG*WTASYS Trigger: CGAGTAAGATGCTGTCCAGCATCCTGGGGAAGAGCA...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCAGATGGTCAGGGAGATaGTCATCCCTGCGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSRWSGR*SSLRTG Trigger: TCCAGTTCGCAGGGATGAGCATCTCCCTGACCATCT...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGACCTTGGAAGGGCACTaGAAATACTGTTTGAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRTLEGH*KYCLNR Trigger: CCGGTTCAAACAGTATTTGCAGTGCCCTTCCAAGGT...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | CTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAGGAGCGTGGGGTCTaGCTTTCAATCGAGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRVSSPLVAGDKAHSRQRQERGV*LSIEHP Trigger: TGGATGCTCGATTGAAAGGCAGACCCCACGCTCCTG...TCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCAGCATTCCAGAATGTaGCAAGCTCTGCGATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRQHSRM*QALRLT Trigger: TGTCAATCGCAGAGCTTGCCACATTCTGGAATGCTG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCTCTTCTTCAGTCCATaGCTCATCCAGACTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRLFFSP*LIQTLH Trigger: ATGCAGAGTCTGGATGAGCCATGGACTGAAGAAGAG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCGGGGAGGCATCTTGGTaGGAACGCTGTTGTAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSGEASW*ERCCSM Trigger: CATACTACAACAGCGTTCCCACCAAGATGCCTCCCC...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | AAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGCTGGGGGAGGCATCTTaGTGGGAACGCTGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLRVSSPLVAGDKAHSRQLGEAS*WERCCS Trigger: ACTACAACAGCGTTCCCACCAAGATGCCTCCCCCAG...CTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | CTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACACCTGTGGTGGGACTaGCTGGGTGTTGACATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRVSSPLVAGDKAHSRQRHLWWD*LGVDIG Trigger: ACCTATGTCAACACCCAGCCAGTCCCACCACAGGTG...TCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | TGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCCTCACCGACAGGCTGTaGAGAAGGTCATCGACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: WASSGFPLHWLLETKLTPLTDRL*RRSSTD Trigger: ATCGGTCGATGACCTTCTCCACAGCCTGTCGGTGAG...GGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR TCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCCTGAGTTCTTGTACTaGAGTCAAGAGACCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRPEFLY*SQETSL Trigger: CAATGAGGTCTCTTGACTTCAGTACAAGAACTCAGG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR TCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGAGATAGACCGCATATaGTGGTTCGCTATGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPREIDRI*WFAMIC Trigger: ACAGATCATAGCGAACCATCATATGCGGTCTATCTC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGATCACCGAGTCATTCCTaGAGCGGTTGTACTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRVSSPLVAGDKAHSRQRSPSHS*SGCTWC Trigger: GCACCAAGTACAACCGCTTCAGGAATGACTCGGTGA...TCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR GCA 90 bp | AAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGATGGTCAGGGAGATaGTCATCCCTGCGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLRVSSPLVAGDKAHSRQRWSGR*SSLRTG Trigger: TCCAGTTCGCAGGGATGAGCATCTCCCTGACCATCT...CTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR GCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCAGTTTGCTCTTTTCCTaGAAACTGGGCTGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSSLLFS*KLGCLR Trigger: CCTGAGGCAGCCCAGTTTGCAGGAAAAGAGCAAACT...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCTTCCTCTCCACTGGTTaGTGGAGACAAAGCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSFLSTG*WRQSSL Trigger: GAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAA...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | TCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACGAGCCAATGACATCTTaGGCTAGCCCGTCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGFPLHWLLETKLTPGRDEPMTS*ASPSQH Trigger: ATGCTGTGACGGGCTAGCCCAAGATGTCATTGGCTC...GTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCAACGCTGTTGTAGTATaGGTGATCAGGGCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSNAVVV*VIRAIS Trigger: GGAGATGGCCCTGATCACCCATACTACAACAGCGTT...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGGTGTTGACATAGGTTaGTGTTTCTCCTACAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRGVDIG*CFSYRN Trigger: GTTCCTGTAGGAGAAACACCAACCTATGTCAACACC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | CAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACACTGGAGAGTTTCAAGTaGGACACCTTGTGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGFLSTGCWRQSSLPAETLESFK*DTLWSR Trigger: CCTGCTCCACAAGGTGTCCCACTTGAAACTCTCCAG...TGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR TCA 90 bp | TCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACGTCAAGAGACCTCATTaGGCGCAGAACTTCGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGFPLHWLLETKLTPGRDVKRPH*AQNFDA Trigger: TGCATCGAAGTTCTGCGCTCAATGAGGTCTCTTGAC...GTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR TCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCGCTTCCCTGGTAACCTaGGTTCTTGTACTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSASLVT*VLVLKS Trigger: TGACTTCAGTACAAGAACTCAGGTTACCAGGGAAGC...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR GCA 90 bp | CTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACAATGGGCAGGACCTTGGAAGGGCACTaGAAATACTGTTTGAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTGCWRQSSLPAETMGRTLEGH*KYCLNR Trigger: CCGGTTCAAACAGTATTTGCAGTGCCCTTCCAAGGT...CCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCAGCATTCCAGAATGTaGCAAGCTCTGCGATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSQHSRM*QALRLT Trigger: TGTCAATCGCAGAGCTTGCCACATTCTGGAATGCTG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | GGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCTTCTTCAGTCCATaGCTCATCCAGACTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GAGQAQGFLSTGCWRQSSLFFSP*LIQTLH Trigger: ATGCAGAGTCTGGATGAGCCATGGACTGAAGAAGAG...TGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR TCA 90 bp | CTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGAGCTTCCCTGGTAACCTaGGTTCTTGTACTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRVSSPLVAGDKAHSRQRASLVT*VLVLKS Trigger: TGACTTCAGTACAAGAACTCAGGTTACCAGGGAAGC...TCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR TCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCTATGATGGTTCGCTATaGTCTGTTTGGAGTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSYDGSL*SVWSQE Trigger: CTCCTGACTCCAAACAGATCATAGCGAACCATCATA...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR TCA 90 bp | GGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCATATGATGGTTCGCTATaGTCTGTTTGGAGTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GAGQAQGFLSTGCWRQSSYDGSL*SVWSQE Trigger: CTCCTGACTCCAAACAGATCATAGCGAACCATCATA...TGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
||
| CDS-3UTR TCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCGAGATAGACCGCATATaGTGGTTCGCTATGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSEIDRI*WFAMIC Trigger: ACAGATCATAGCGAACCATCATATGCGGTCTATCTC...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CCA 90 bp | CAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACACAGCATTCCAGAATGTaGCAAGCTCTGCGATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QGFLSTGCWRQSSLPAETQHSRM*QALRLT Trigger: TGTCAATCGCAGAGCTTGCCACATTCTGGAATGCTG...TGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
||
| CDS-3UTR CCA 90 bp | GGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCAGGTGTTGACATAGGTTaGTGTTTCTCCTACAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GAGQAQGFLSTGCWRQSSGVDIG*CFSYRN Trigger: GTTCCTGTAGGAGAAACACCAACCTATGTCAACACC...TGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
||
| CDS-3UTR CCA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCGGTGTTGACATAGGTTaGTGTTTCTCCTACAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSGVDIG*CFSYRN Trigger: GTTCCTGTAGGAGAAACACCAACCTATGTCAACACC...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR TCA 90 bp | CAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCACCTGAGTTCTTGTACTaGAGTCAAGAGACCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QAQGFLSTGCWRQSSLPAPEFLY*SQETSL Trigger: CAATGAGGTCTCTTGACTTCAGTACAAGAACTCAGG...TGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS CCA 90 bp | CACCTGATCGCTGGTGTGCGGCGCGCCCCGAGGGGGCCTGGGCAGTaGCTCGTCGCCGGCCCGGCTCTTCCTGGTGGCACTCATGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLIAGVRRAPRGPGQ*LVAGPALPGGTHAG Trigger: GCCAGCATGAGTGCCACCAGGAAGAGCCGGGCCGGCGACGAGCCACTGCCCAGGCCCCCTCGGGGCGCGCCGCACACCAGCGATCAGGTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 90 bp | CGCCCGACACCAGGTAGGGGCTCGCCGCGGGCTCCGCCGAGACCTTaGCGCCGCTGCCGCTCACCGACAGGCTGTGGAGAAGGTCATCGA | + |
|
Preference number: 5 (lower is better) Translates to: RPTPGRGSPRAPPRP*RRCRSPTGCGEGHR Trigger: TCGATGACCTTCTCCACAGCCTGTCGGTGAGCGGCAGCGGCGGCAAGGTCTCGGCGGAGCCCGCGGCGAGCCCCTACCTGGTGTCGGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CCA 90 bp | CTGCCCGCTCCCGGGCGGCCGACGACAGGCCACGCAGGCCGGAGCTaGAGAGTTTCAAGTGGGACACCTTGTGGAGCAGGTGGCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPAPGRPTTGHAGRS*RVSSGTPCGAGGPG Trigger: GCCTGGGCCACCTGCTCCACAAGGTGTCCCACTTGAAACTCTCCAGCTCCGGCCTGCGTGGCCTGTCGTCGGCCGCCCGGGAGCGGGCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 90 bp | CCAGGTAGGGGCTCGCCGCGGGCTCCGCCGAGACCTTGCCGCCGCTaGCGCTCACCGACAGGCTGTGGAGAAGGTCATCGACCGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGRGSPRAPPRPCRR*RSPTGCGEGHRPMS Trigger: TGACATCGGTCGATGACCTTCTCCACAGCCTGTCGGTGAGCGGCAGCGGCGGCAAGGTCTCGGCGGAGCCCGCGGCGAGCCCCTACCTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | ATGGGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGACCATCGTCCGGCGCCTaGCGCAGCGCCTCGCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: MGAGALGKLRVSSPLVAGPSSGA*RSASPD Trigger: GTCGGGCGAGGCGCTGCGCAAGGCGCCGGACGATGG...TCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCCCAT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS GCA 90 bp | TGGAGAGTTTCAAGTGGGACACCTTGTGGAGCAGGTGGCCCAGGCTaGCGGGCCCATCGTCCGGCGCCTTGCGCAGCGCCTCGCCCGACA | + |
|
Preference number: 5 (lower is better) Translates to: WRVSSGTPCGAGGPG*RAHRPAPCAAPRPT Trigger: TGTCGGGCGAGGCGCTGCGCAAGGCGCCGGACGATGGGCCCGGCAGCCTGGGCCACCTGCTCCACAAGGTGTCCCACTTGAAACTCTCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCCATCGTCCGGCGCCTaGCGCAGCGCCTCGCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSPSSGA*RSASPD Trigger: GTCGGGCGAGGCGCTGCGCAAGGCGCCGGACGATGG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CCA 90 bp | GGCTCCGCCGAGACCTTGCCGCCGCTGCCGCTCACCGACAGGCTGTaGAGAAGGTCATCGACCGATGTCACCGAGTCATTCCTGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSAETLPPLPLTDRL*RRSSTDVTESFLKR Trigger: CCGCTTCAGGAATGACTCGGTGACATCGGTCGATGACCTTCTCCACAGCCTGTCGGTGAGCGGCAGCGGCGGCAAGGTCTCGGCGGAGCC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | GGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACCCTGCGAACTGGAGGTaGCTCTTCCCCAGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GAGALGKLRVSSPLVAGDPANWR*LFPRML Trigger: CAGCATCCTGGGGAAGAGCAACCTCCAGTTCGCAGG...GTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CAA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGGATGTCCAAGGAGCCTaGCCTGGTGGGTGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRDVQGA*PGGCSL Trigger: CAGCGAGCACCCACCAGGCAAGGCTCCTTGGACATC...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTTCTTGAGGGCTCCTTaGGCACCTGGCACAGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRFLRAP*APGTAS Trigger: CGAAGCTGTGCCAGGTGCCAAAGGAGCCCTCAAGAA...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCCTGCTCATCTCTCCTaGGTACCAGGGCTCAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRPAHLS*VPGLSV Trigger: AACGCTGAGCCCTGGTACCAAGGAGAGATGAGCAGG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTGCTTGGCCTGCCCATaGTGCATGCCTGTGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRCLACP*CMPVRT Trigger: TGTCCTCACAGGCATGCACAATGGGCAGGCCAAGCA...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | GGGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGATCATTCCTGAAGCGGTaGTACTTGGTGCGTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGWGAGQAQGFLSTGCWRSFLKR*YLVRGS Trigger: GCTTCCACGCACCAAGTACAACCGCTTCAGGAATGA...TCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS GCA 90 bp | CCTGTCCTTCGTCCGGATTCATGTCAAAGAGGTCCTTCCGTGGGCTaGTCTCAGTGCTGCTGGTTGCTGCTGGCCACACCTGTGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PVLRPDSCQRGPSVG*SQCCWLLLATPVVG Trigger: TCCCACCACAGGTGTGGCCAGCAGCAACCAGCAGCACTGAGAGCAGCCCACGGAAGGACCTCTTTGACATGAATCCGGACGAAGGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCCTGCGAACTGGAGGTaGCTCTTCCCCAGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSPANWR*LFPRML Trigger: CAGCATCCTGGGGAAGAGCAACCTCCAGTTCGCAGG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTGGCAAGCTCTGCGATaGACAGGGTCCTTAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRWQALR*TGSLAT Trigger: TGTCGCTAAGGACCCTGTCAATCGCAGAGCTTGCCA...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTGGAGGGCAGGAACCTaGGAAGGGCACTGCAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRWRAGT*EGHCKY Trigger: GTATTTGCAGTGCCCTTCCAAGGTTCCTGCCCTCCA...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | CTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCGATGTCCAAGGAGCCTaGCCTGGTGGGTGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGKLRVSSPLVAGDKAHSDVQGA*PGGCSL Trigger: CAGCGAGCACCCACCAGGCAAGGCTCCTTGGACATC...GGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCTCTCAGTGCTGCTGGTaGCTGCTGGCCACACCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSSQCCW*LLATPV Trigger: CACAGGTGTGGCCAGCAGCAACCAGCAGCACTGAGA...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 90 bp | CATGTCAAAGAGGTCCTTCCGTGGGCTGCTCTCAGTGCTGCTGGTTaGTGCTGGCCACACCTGTGGTGGGACTGGCTGGGTGTTGACATA | + |
|
Preference number: 5 (lower is better) Translates to: HVKEVLPWAALSAAG*CWPHLWWDWLGVDI Trigger: TATGTCAACACCCAGCCAGTCCCACCACAGGTGTGGCCAGCAGCAACCAGCAGCACTGAGAGCAGCCCACGGAAGGACCTCTTTGACATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | ATGGGGGCTGGGGCGCTGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAAGTCAAGAGACCTCATaGAGCGCAGAACTTCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: MGAGALGKLRVSSPLVAGSQETS*SAELRC Trigger: GCATCGAAGTTCTGCGCTCAATGAGGTCTCTTGACT...TCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CAA 90 bp | CTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGATCTCAGTGCTGCTGGTaGCTGCTGGCCACACCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRVSSPLVAGDKAHSRQRSQCCW*LLATPV Trigger: CACAGGTGTGGCCAGCAGCAACCAGCAGCACTGAGA...TCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CAA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCATTCCTGAAGCGGTaGTACTTGGTGCGTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRSFLKR*YLVRGS Trigger: GCTTCCACGCACCAAGTACAACCGCTTCAGGAATGA...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGAGTCAAGAGACCTCATaGAGCGCAGAACTTCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRSQETS*SAELRC Trigger: GCATCGAAGTTCTGCGCTCAATGAGGTCTCTTGACT...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | AAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGTTCTTGAGGGCTCCTTaGGCACCTGGCACAGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: KLRVSSPLVAGDKAHSRQFLRAP*APGTAS Trigger: CGAAGCTGTGCCAGGTGCCAAAGGAGCCCTCAAGAA...CTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCTGGCAAGCTCTGCGATaGACAGGGTCCTTAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSWQALR*TGSLAT Trigger: TGTCGCTAAGGACCCTGTCAATCGCAGAGCTTGCCA...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCCGGAGTTCAAAGGCTaGTCCGATGGAGCCAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSPEFKG*SDGAND Trigger: GTCATTGGCTCCATCGGACAAGCCTTTGAACTCCGG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCTGGAGGGCAGGAACCTaGGAAGGGCACTGCAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSWRAGT*EGHCKY Trigger: GTATTTGCAGTGCCCTTCCAAGGTTCCTGCCCTCCA...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCACAAAGGAGCCGGGGTaGGTGGTACTCTTCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSTKEPG*VVLFLT Trigger: AGTGAGGAAGAGTACCACCAACCCCGGCTCCTTTGT...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTTTCCTCTCCACTGGTaGCTGGAGACAAAGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRFPLHW*LETKLT Trigger: AGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAA...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
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| CDS GCA 90 bp | TCAGGGCCATCTCCCTCTTCTTCAGTCCATGGCTCATCCAGACTCTaGATTCGGTCCTGGAGGGCAGGAACCTTGGAAGGGCACTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SGPSPSSSVHGSSRL*IRSWRAGTLEGHCK Trigger: TTTGCAGTGCCCTTCCAAGGTTCCTGCCCTCCAGGACCGAATGCAGAGTCTGGATGAGCCATGGACTGAAGAAGAGGGAGATGGCCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | CTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGATGGCAAGCTCTGCGATaGACAGGGTCCTTAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: LRVSSPLVAGDKAHSRQRWQALR*TGSLAT Trigger: TGTCGCTAAGGACCCTGTCAATCGCAGAGCTTGCCA...TCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CAA 90 bp | AAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGCCGGAGTTCAAAGGCTaGTCCGATGGAGCCAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: KLRVSSPLVAGDKAHSRQPEFKG*SDGAND Trigger: GTCATTGGCTCCATCGGACAAGCCTTTGAACTCCGG...CTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CAA 90 bp | AAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGTGGAGGGCAGGAACCTaGGAAGGGCACTGCAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: KLRVSSPLVAGDKAHSRQWRAGT*EGHCKY Trigger: GTATTTGCAGTGCCCTTCCAAGGTTCCTGCCCTCCA...CTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCAGTCAAGAGACCTCATaGAGCGCAGAACTTCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSSQETS*SAELRC Trigger: GCATCGAAGTTCTGCGCTCAATGAGGTCTCTTGACT...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | TGGGCCCACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGCACTGCAAATACTGTTaGAACCGGAGTTCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WAHRQLPHFHRLRAAEPRHCKYC*NRSSKA Trigger: AGCCTTTGAACTCCGGTTCAAACAGTATTTGCAGTG...CCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCTTTCCTCTCCACTGGTaGCTGGAGACAAAGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSFPLHW*LETKLT Trigger: AGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAA...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
||
| CDS CCA 90 bp | GTTGTAGTATGGGTGATCAGGGCCATCTCCCTCTTCTTCAGTCCATaGCTCATCCAGACTCTGCATTCGGTCCTGGAGGGCAGGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: VVVWVIRAISLFFSP*LIQTLHSVLEGRNL Trigger: AAGGTTCCTGCCCTCCAGGACCGAATGCAGAGTCTGGATGAGCCATGGACTGAAGAAGAGGGAGATGGCCCTGATCACCCATACTACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 90 bp | TTGGTGTTTCTCCTACAGGAACCATGTGAGTTTTCCCTTCTGCTGTaGTATAGATGTCCAAGGAGCCTTGCCTGGTGGGTGCTCGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVFLLQEPCEFSLLL*YRCPRSLAWWVLAA Trigger: GGCAGCGAGCACCCACCAGGCAAGGCTCCTTGGACATCTATAGCACAGCAGAAGGGAAAACTCACATGGTTCCTGTAGGAGAAACACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CCA 90 bp | CCCTCTTCTTCAGTCCATGGCTCATCCAGACTCTGCATTCGGTCCTaGAGGGCAGGAACCTTGGAAGGGCACTGCAAATACTGTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSSSVHGSSRLCIRS*RAGTLEGHCKYCLN Trigger: GTTCAAACAGTATTTGCAGTGCCCTTCCAAGGTTCCTGCCCTCCAGGACCGAATGCAGAGTCTGGATGAGCCATGGACTGAAGAAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCCACTGCAAATACTGTTaGAACCGGAGTTCAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSHCKYC*NRSSKA Trigger: AGCCTTTGAACTCCGGTTCAAACAGTATTTGCAGTG...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS TCA 90 bp | GTTGTGTCCGGGTCTCCCCCTGAGGCAAAAGAGATAGACCGCATATaGTGGTTCGCTATGATCTGTTTGGAGTCAGGAGTGCGCAGATTC | + |
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Preference number: 5 (lower is better) Translates to: VVSGSPPEAKEIDRI*WFAMICLESGVRRF Trigger: GAATCTGCGCACTCCTGACTCCAAACAGATCATAGCGAACCATCATATGCGGTCTATCTCTTTTGCCTCAGGGGGAGACCCGGACACAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | TGGGCAAGCTCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCCACTGCAAATACTGTTaGAACCGGAGTTCAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: WASSGFPLHWLLETKLTPHCKYC*NRSSKA Trigger: AGCCTTTGAACTCCGGTTCAAACAGTATTTGCAGTG...GGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS-3UTR CAA 90 bp | CACAGACAGTTGCCCCATTTCCATAGGCTGAGAGCCGCAGAGCCCAGGTCTTCCTCCCTGGTAATAAGTTaGCTCTTTTCCTGCAAACTG | + |
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Preference number: 5 (lower is better) Translates to: HRQLPHFHRLRAAEPRSSSLVIS*LFSCKL Trigger: CAGTTTGCAGGAAAAGAGCAAACTTATTACCAGGGA...GGAAGACCTGGGCTCTGCGGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 90 bp | GTGTCTTCCCTGGTAATAAGTTTGCTCTTTTCCTGCAAACTGGGCTaGCTCAGGAGCGTGGGGTCTGCCTTTCAATCGAGCATCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: VSSLVISLLFSCKLG*LRSVGSAFQSSIQK Trigger: TTTCTGGATGCTCGATTGAAAGGCAGACCCCACGCTCCTGAGGCAGCCCAGTTTGCAGGAAAAGAGCAAACTTATTACCAGGGAAGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 90 bp | ATAGGTTGGTGTTTCTCCTACAGGAACCATGTGAGTTTTCCCTTCTaGTGTGCTATAGATGTCCAAGGAGCCTTGCCTGGTGGGTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: IGWCFSYRNHVSFPF*CAIDVQGALPGGCS Trigger: CGAGCACCCACCAGGCAAGGCTCCTTGGACATCTATAGCACAGCAGAAGGGAAAACTCACATGGTTCCTGTAGGAGAAACACCAACCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS-3UTR CAA 90 bp | TCAGGGTTTCCTCTCCACTGGTTGCTGGAGACAAAGCTCACTCCCGGCAGAGACTCCCTGGTAATAAGTTaGCTCTTTTCCTGCAAACTG | + |
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Preference number: 5 (lower is better) Translates to: SGFPLHWLLETKLTPGRDSLVIS*LFSCKL Trigger: CAGTTTGCAGGAAAAGAGCAAACTTATTACCAGGGA...GTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223543.3 |
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| CDS GCA 72 bp | GGTGGCCCAGGCTGCCGGGCCCATCGTCCGGCGCCTTaGGCAGCGCCTCGCCCGACACCAGGTAGGGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: GGPGCRAHRPAP*AAPRPTPGRGS Trigger: CGAGCCCCTACCTGGTGTCGGGCGAGGCGCTGCGCAAGGCGCCGGACGATGGGCCCGGCAGCCTGGGCCACC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CCA 72 bp | CCTGATCGCTGGTGTGCGGCGCGCCCCGAGGGGGCCTaGGCAGTGGCTCGTCGCCGGCCCGGCTCTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PDRWCAARPEGA*AVARRRPGSSW Trigger: CCAGGAAGAGCCGGGCCGGCGACGAGCCACTGCCCAGGCCCCCTCGGGGCGCGCCGCACACCAGCGATCAGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 72 bp | CCAGGTAGGGGCTCGCCGCGGGCTCCGCCGAGACCTTaGCGCCGCTGCCGCTCACCGACAGGCTGTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: PGRGSPRAPPRP*RRCRSPTGCGE Trigger: TTCTCCACAGCCTGTCGGTGAGCGGCAGCGGCGGCAAGGTCTCGGCGGAGCCCGCGGCGAGCCCCTACCTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 72 bp | GGCTCGCCGCGGGCTCCGCCGAGACCTTGCCGCCGCTaGCGCTCACCGACAGGCTGTGGAGAAGGTCATCGA | + |
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Preference number: 6 (lower is better) Translates to: GSPRAPPRPCRR*RSPTGCGEGHR Trigger: TCGATGACCTTCTCCACAGCCTGTCGGTGAGCGGCAGCGGCGGCAAGGTCTCGGCGGAGCCCGCGGCGAGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 72 bp | TCAAGTGGGACACCTTGTGGAGCAGGTGGCCCAGGCTaGCGGGCCCATCGTCCGGCGCCTTGCGCAGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSGTPCGAGGPG*RAHRPAPCAAP Trigger: AGGCGCTGCGCAAGGCGCCGGACGATGGGCCCGGCAGCCTGGGCCACCTGCTCCACAAGGTGTCCCACTTGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CCA 72 bp | CCCGGGCGGCCGACGACAGGCCACGCAGGCCGGAGCTaGAGAGTTTCAAGTGGGACACCTTGTGGAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PGRPTTGHAGRS*RVSSGTPCGAG Trigger: ACCTGCTCCACAAGGTGTCCCACTTGAAACTCTCCAGCTCCGGCCTGCGTGGCCTGTCGTCGGCCGCCCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CCA 72 bp | GAGACCTTGCCGCCGCTGCCGCTCACCGACAGGCTGTaGAGAAGGTCATCGACCGATGTCACCGAGTCATTC | + |
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Preference number: 6 (lower is better) Translates to: ETLPPLPLTDRL*RRSSTDVTESF Trigger: GAATGACTCGGTGACATCGGTCGATGACCTTCTCCACAGCCTGTCGGTGAGCGGCAGCGGCGGCAAGGTCTC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CCA 72 bp | AGTCAGGAGTGCGCAGATTCAGGCTGGCGGTGGAGATaGTCAGGGAGATGCTCATCCCTGCGAACTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: SQECADSGWRWR*SGRCSSLRTGG Trigger: ACCTCCAGTTCGCAGGGATGAGCATCTCCCTGACCATCTCCACCGCCAGCCTGAATCTGCGCACTCCTGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CCA 72 bp | TGGGTGATCAGGGCCATCTCCCTCTTCTTCAGTCCATaGCTCATCCAGACTCTGCATTCGGTCCTGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: WVIRAISLFFSP*LIQTLHSVLEG Trigger: GCCCTCCAGGACCGAATGCAGAGTCTGGATGAGCCATGGACTGAAGAAGAGGGAGATGGCCCTGATCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CAA 90 bp | TTGGCCTGCCCATTGTGCATGCCTGTGAGGACAAAGGAGCCGGGGTaGGTGGTACTCTTCCTCACTAGGAAGTCTCCATCTTCCCGTAGC | + |
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Preference number: 6 (lower is better) Translates to: LACPLCMPVRTKEPG*VVLFLTRKSPSSRS Trigger: GCTACGGGAAGATGGAGACTTCCTAGTGAGGAAGAGTACCACCAACCCCGGCTCCTTTGTCCTCACAGGCATGCACAATGGGCAGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021898.6 ENSMUST00000239056.2 |
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| CDS CCA 72 bp | TGCTCTTTTCCTGCAAACTGGGCTGCCTCAGGAGCGTaGGGTCTGCCTTTCAATCGAGCATCCAGAAACCCC | + |
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Preference number: 6 (lower is better) Translates to: CSFPANWAASGA*GLPFNRASRNP Trigger: GGGGTTTCTGGATGCTCGATTGAAAGGCAGACCCCACGCTCCTGAGGCAGCCCAGTTTGCAGGAAAAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CAA 72 bp | ATGCTGGACAGCATCTTACTCGGCGGCTTTCTCTTCTaGAGGGCTCCTTTGGCACCTGGCACAGCTTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: MLDSILLGGFLF*RAPLAPGTASQ Trigger: CTGCGAAGCTGTGCCAGGTGCCAAAGGAGCCCTCAAGAAGAGAAAGCCGCCGAGTAAGATGCTGTCCAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 72 bp | TCATCCCTGCGAACTGGAGGTTGCTCTTCCCCAGGATaGTGGACAGCATCTTACTCGGCGGCTTTCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SSLRTGGCSSPG*WTASYSAAFSS Trigger: AGAAGAGAAAGCCGCCGAGTAAGATGCTGTCCAGCATCCTGGGGAAGAGCAACCTCCAGTTCGCAGGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CCA 72 bp | TCAGTCCATGGCTCATCCAGACTCTGCATTCGGTCCTaGAGGGCAGGAACCTTGGAAGGGCACTGCAAATAC | + |
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Preference number: 6 (lower is better) Translates to: SVHGSSRLCIRS*RAGTLEGHCKY Trigger: GTATTTGCAGTGCCCTTCCAAGGTTCCTGCCCTCCAGGACCGAATGCAGAGTCTGGATGAGCCATGGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CCA 72 bp | TGGGGGAGGCATCTTGGTGGGAACGCTGTTGTAGTATaGGTGATCAGGGCCATCTCCCTCTTCTTCAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: WGRHLGGNAVVV*VIRAISLFFSP Trigger: TGGACTGAAGAAGAGGGAGATGGCCCTGATCACCCATACTACAACAGCGTTCCCACCAAGATGCCTCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS CCA 72 bp | CTGCTGTGCTATAGATGTCCAAGGAGCCTTGCCTGGTaGGTGCTCGCTGCCAGTCTTCACCAAATGTATCTC | + |
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Preference number: 6 (lower is better) Translates to: LLCYRCPRSLAW*VLAASLHQMYL Trigger: GAGATACATTTGGTGAAGACTGGCAGCGAGCACCCACCAGGCAAGGCTCCTTGGACATCTATAGCACAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 72 bp | CTGGTAATAAGTTTGCTCTTTTCCTGCAAACTGGGCTaGCTCAGGAGCGTGGGGTCTGCCTTTCAATCGAGC | + |
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Preference number: 6 (lower is better) Translates to: LVISLLFSCKLG*LRSVGSAFQSS Trigger: GCTCGATTGAAAGGCAGACCCCACGCTCCTGAGGCAGCCCAGTTTGCAGGAAAAGAGCAAACTTATTACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 72 bp | CTCCTACAGGAACCATGTGAGTTTTCCCTTCTGCTGTaGTATAGATGTCCAAGGAGCCTTGCCTGGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LLQEPCEFSLLL*YRCPRSLAWWV Trigger: CACCCACCAGGCAAGGCTCCTTGGACATCTATAGCACAGCAGAAGGGAAAACTCACATGGTTCCTGTAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS TCA 72 bp | GGGTCTCCCCCTGAGGCAAAAGAGATAGACCGCATATaGTGGTTCGCTATGATCTGTTTGGAGTCAGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: GSPPEAKEIDRI*WFAMICLESGV Trigger: CACTCCTGACTCCAAACAGATCATAGCGAACCATCATATGCGGTCTATCTCTTTTGCCTCAGGGGGAGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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| CDS GCA 72 bp | TGTTTCTCCTACAGGAACCATGTGAGTTTTCCCTTCTaGTGTGCTATAGATGTCCAAGGAGCCTTGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: CFSYRNHVSFPF*CAIDVQGALPG Trigger: ACCAGGCAAGGCTCCTTGGACATCTATAGCACAGCAGAAGGGAAAACTCACATGGTTCCTGTAGGAGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021898.6 ENSMUST00000223543.3 ENSMUST00000239056.2 |
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