Pregenerated sensors for SHC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020312Ensembl transcript IDs: ENSMUST00000020564.7
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCCTGACTCTGTCTCACGGGCCCAGCCAGCTGAGCGAGCACAGCTaGGAAAGGCGGCTTCCCGAGGGCTCGTGTGGAAGGAGAGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: TLTLSHGPSQLSEHS*ERRLPEGSCGRRGG Trigger: ACCACCTCTCCTTCCACACGAGCCCTCGGGAAGCCGCCTTTCCCAGCTGTGCTCGCTCAGCTGGCTGGGCCCGTGAGACAGAGTCAGGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CCA 90 bp | GCCCTGGGGCTTCACAAAGCTTCCCCCTTGCCTCGGTTGCCCACCTaGGAATCCCTAGCAGACACAGCAGGCTCACGCTCAACCCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: ALGLHKASPLPRLPT*ESLADTAGSRSTLC Trigger: ACACAGGGTTGAGCGTGAGCCTGCTGTGTCTGCTAGGGATTCCCAGGTGGGCAACCGAGGCAAGGGGGAAGCTTTGTGAAGCCCCAGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CCA 90 bp | GTCTTTGGTTTGTACAGCCCTCACCCTTCAGGGTTGGGGCTCAGGTaGGAGCAGAGGCTTGACCCTGACTCTGTCTCACGGGCCCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: VFGLYSPHPSGLGLR*EQRLDPDSVSRAQP Trigger: TGGCTGGGCCCGTGAGACAGAGTCAGGGTCAAGCCTCTGCTCCCACCTGAGCCCCAACCCTGAAGGGTGAGGGCTGTACAAACCAAAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CCA 90 bp | CGACTCGGTCTGTCTTTGGTTTGTACAGCCCTCACCCTTCAGGGTTaGGGCTCAGGTGGGAGCAGAGGCTTGACCCTGACTCTGTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: RLGLSLVCTALTLQG*GSGGSRGLTLTLSH Trigger: GTGAGACAGAGTCAGGGTCAAGCCTCTGCTCCCACCTGAGCCCCAACCCTGAAGGGTGAGGGCTGTACAAACCAAAGACAGACCGAGTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR TCA 90 bp | CCACTTCCGTGGGGAATGGCAAGGTGGGTGGTGGGGGTGGGACTCTaGGCCTTTCTGTATTTGGAAGAAGAGAGCATCAAGGTGACCTGT | + |
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Preference number: 1 (lower is better) Translates to: PLPWGMARWVVGVGL*AFLYLEEESIKVTC Trigger: ACAGGTCACCTTGATGCTCTCTTCTTCCAAATACAGAAAGGCTCAGAGTCCCACCCCCACCACCCACCTTGCCATTCCCCACGGAAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CCA 90 bp | GGCCTGCATTTGGATGTCTTCGTTAAAGGCGACTCGGTCTGTCTTTaGTTTGTACAGCCCTCACCCTTCAGGGTTGGGGCTCAGGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: GLHLDVFVKGDSVCL*FVQPSPFRVGAQVG Trigger: TCCCACCTGAGCCCCAACCCTGAAGGGTGAGGGCTGTACAAACCAAAGACAGACCGAGTCGCCTTTAACGAAGACATCCAAATGCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CCA 90 bp | GTAAGTTTCCACTTCCGTGGGGAATGGCAAGGTGGGTGGTGGGGGTaGGACTCTGAGCCTTTCTGTATTTGGAAGAAGAGAGCATCAAGG | + |
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Preference number: 1 (lower is better) Translates to: VSFHFRGEWQGGWWG*DSEPFCIWKKRASR Trigger: CCTTGATGCTCTCTTCTTCCAAATACAGAAAGGCTCAGAGTCCCACCCCCACCACCCACCTTGCCATTCCCCACGGAAGTGGAAACTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CCA 90 bp | AACCATGTAAGTTTCCACTTCCGTGGGGAATGGCAAGGTGGGTGGTaGGGGTGGGACTCTGAGCCTTTCTGTATTTGGAAGAAGAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: NHVSFHFRGEWQGGW*GWDSEPFCIWKKRA Trigger: TGCTCTCTTCTTCCAAATACAGAAAGGCTCAGAGTCCCACCCCCACCACCCACCTTGCCATTCCCCACGGAAGTGGAAACTTACATGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CAA 90 bp | TCTGCTCTAGCCCTGGGGCTTCACAAAGCTTCCCCCTTGCCTCGGTaGCCCACCTGGGAATCCCTAGCAGACACAGCAGGCTCACGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SALALGLHKASPLPR*PTWESLADTAGSRS Trigger: TGAGCGTGAGCCTGCTGTGTCTGCTAGGGATTCCCAGGTGGGCAACCGAGGCAAGGGGGAAGCTTTGTGAAGCCCCAGGGCTAGAGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR CCA 90 bp | CAGTCCCACCTAGCCGTCTGCTCTAGCCCTGGGGCTTCACAAAGCTTCCCCCTTCTCACCCTTCAGGGTTaGGGCTCAGGTGGGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: QSHLAVCSSPGASQSFPLLTLQG*GSGGSR Trigger: TCTGCTCCCACCTGAGCCCCAACCCTGAAGGGTGAG...AAGGGGGAAGCTTTGTGAAGCCCCAGGGCTAGAGCAGACGGCTAGGTGGGACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR GCA 90 bp | CACCTCACTGAGGTTCCCCTGCCTCTGACTCACCTGGATACCCTACATGCCAGGGCAGGACACTACCCCTaGCCACACAGAGCTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: HLTEVPLPLTHLDTLHARAGHYP*PHRAVH Trigger: GTGGACAGCTCTGTGTGGGCAGGGGTAGTGTCCTGC...CCTGGCATGTAGGGTATCCAGGTGAGTCAGAGGCAGGGGAACCTCAGTGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR CCA 90 bp | GACCCTGACTCTGTCTCACGGGCCCAGCCAGCTGAGCGAGCACAGCTGGGAAAGTCTAGGGGTAGAAGTTaGGCTGAGGACTGTCACCTG | + |
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Preference number: 2 (lower is better) Translates to: DPDSVSRAQPAERAQLGKSRGRS*AEDCHL Trigger: CAGGTGACAGTCCTCAGCCCAACTTCTACCCCTAGA...CTTTCCCAGCTGTGCTCGCTCAGCTGGCTGGGCCCGTGAGACAGAGTCAGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CAA 90 bp | GCGACTCGGTCTGTCTTTGGTTTGTACAGCCCTCACCCTTCAGGGTaGGGGCTCAGGTGGGAGCAGAGGCTTGACCCTGACTCTGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: ATRSVFGLYSPHPSG*GLRWEQRLDPDSVS Trigger: TGAGACAGAGTCAGGGTCAAGCCTCTGCTCCCACCTGAGCCCCAACCCTGAAGGGTGAGGGCTGTACAAACCAAAGACAGACCGAGTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR TCA 90 bp | CAGTCCCACCTAGCCGTCTGCTCTAGCCCTGGGGCTTCACAAAGCTTCCCCCTTCGTGGCTTCAGGATCTaGGAGAAAGGCCTCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: QSHLAVCSSPGASQSFPLRGFRI*EKGLSK Trigger: CTTGCTGAGGCCTTTCTCTCAGATCCTGAAGCCACG...AAGGGGGAAGCTTTGTGAAGCCCCAGGGCTAGAGCAGACGGCTAGGTGGGACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR GCA 90 bp | GGGGGTGGGACTCTGAGCCTTTCTGTATTTGGAAGAAGAGAGCATCAAGGTGACACAAAGCTTCCCCCTTaGCTCGGTTGCCCACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GGGTLSLSVFGRREHQGDTKLPP*LGCPPG Trigger: CCCAGGTGGGCAACCGAGGCAAGGGGGAAGCTTTGT...GTCACCTTGATGCTCTCTTCTTCCAAATACAGAAAGGCTCAGAGTCCCACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGTTGCCAAGAAGGGACTGGGGAAACACCAAACAGGGAGAGAGGCTAATTCTGAGCGAGCACAGCTaGGAAAGGCGGCTTCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: TVLPRRDWGNTKQGERLILSEHS*ERRLPE Trigger: CTCGGGAAGCCGCCTTTCCCAGCTGTGCTCGCTCAG...AATTAGCCTCTCTCCCTGTTTGGTGTTTCCCCAGTCCCTTCTTGGCAACACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CAA 90 bp | TGCATTTGGATGTCTTCGTTAAAGGCGACTCGGTCTGTCTTTGGTTaGTACAGCCCTCACCCTTCAGGGTTGGGGCTCAGGTGGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CIWMSSLKATRSVFG*YSPHPSGLGLRWEQ Trigger: CTGCTCCCACCTGAGCCCCAACCCTGAAGGGTGAGGGCTGTACAAACCAAAGACAGACCGAGTCGCCTTTAACGAAGACATCCAAATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR CCA 90 bp | TGTGTCCACTTCAACAGAAACATCCCTTCACACGTCTACCTTGTCCCTTCACACGGTGGGTGGTGGGGGTaGGACTCTGAGCCTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: CVHFNRNIPSHVYLVPSHGGWWG*DSEPFC Trigger: ACAGAAAGGCTCAGAGTCCCACCCCCACCACCCACC...GTGTGAAGGGACAAGGTAGACGTGTGAAGGGATGTTTCTGTTGAAGTGGACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CAA 90 bp | CCACCTGTGTCCACTTCAACAGAAACATCCCTTCACACGTCTACCTaGTCCCTTCACACGTCGTCTACCTTAGCAAAACGTCCTTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: PPVSTSTETSLHTST*SLHTSSTLAKRPFA Trigger: GGCAAAAGGACGTTTTGCTAAGGTAGACGACGTGTGAAGGGACAAGGTAGACGTGTGAAGGGATGTTTCTGTTGAAGTGGACACAGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CAA 90 bp | AGCATCAAGGTGACCTGTAACTTTGACCTTAATGATGTCTCATGCTaGAGGCAGAAGGAAGCTTTTACTCCCATGCTGGCCCTGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: SIKVTCNFDLNDVSC*RQKEAFTPMLALAG Trigger: ACCTGCCAGGGCCAGCATGGGAGTAAAAGCTTCCTTCTGCCTCAAGCATGAGACATCATTAAGGTCAAAGTTACAGGTCACCTTGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR CCA 90 bp | CACCAAACAGGGAGAGAGGCTAATTTATCTTGGAGTAAAACTAGAGGCTTGTTCCAGGCAGGTGACAGCTaGGAAGTGCTGAGTGGATAC | + |
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Preference number: 2 (lower is better) Translates to: HQTGREANLSWSKTRGLFQAGDS*EVLSGY Trigger: GTATCCACTCAGCACTTCCCAGCTGTCACCTGCCTG...GAACAAGCCTCTAGTTTTACTCCAAGATAAATTAGCCTCTCTCCCTGTTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR TCA 90 bp | CCTTTACATGTCTGCCTCAACAAAACAACATCCAACACAACTGACTTTCTAAAGCTTGTTCACTGTTGGTaGACAGGGGGTGGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: PLHVCLNKTTSNTTDFLKLVHCW*TGGGVQ Trigger: CTGCACCCCACCCCCTGTTCACCAACAGTGAACAAG...CTTTAGAAAGTCAGTTGTGTTGGATGTTGTTTTGTTGAGGCAGACATGTAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR CCA 90 bp | CCTTTACATGTCTGCCTCAACAAAACAACATCCAACACAACTGACTTTCTAAAGCTTTTACTCCCATGCTaGCCCTGGCAGGTACTCCAG | + |
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Preference number: 2 (lower is better) Translates to: PLHVCLNKTTSNTTDFLKLLLPC*PWQVLQ Trigger: CTGGAGTACCTGCCAGGGCCAGCATGGGAGTAAAAG...CTTTAGAAAGTCAGTTGTGTTGGATGTTGTTTTGTTGAGGCAGACATGTAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CCA 72 bp | CTGTCTCACGGGCCCAGCCAGCTGAGCGAGCACAGCTaGGAAAGGCGGCTTCCCGAGGGCTCGTGTGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: LSHGPSQLSEHS*ERRLPEGSCGR Trigger: CCTTCCACACGAGCCCTCGGGAAGCCGCCTTTCCCAGCTGTGCTCGCTCAGCTGGCTGGGCCCGTGAGACAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR CAA 90 bp | TCCCCCTTGCCTCGGTTGCCCACCTGGGAATCCCTAGCAGACACAGCAGGCTCAGGTGGGAGCAGAGGCTaGACCCTGACTCTGTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: SPLPRLPTWESLADTAGSGGSRG*TLTLSH Trigger: GTGAGACAGAGTCAGGGTCAAGCCTCTGCTCCCACC...TGAGCCTGCTGTGTCTGCTAGGGATTCCCAGGTGGGCAACCGAGGCAAGGGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR GCA 72 bp | GGTCCTCAGAGCCCAGCTAGGGCAGGACACTACCCCTaGCCACACAGAGCTGTCCACATCACTGTGGACACA | + |
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Preference number: 3 (lower is better) Translates to: GPQSPARAGHYP*PHRAVHITVDT Trigger: TGTGTCCACAGTGATGTGGACAGCTCTGTGTGGGCAGGGGTAGTGTCCTGCCCTAGCTGGGCTCTGAGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CCA 72 bp | TTGTACAGCCCTCACCCTTCAGGGTTGGGGCTCAGGTaGGAGCAGAGGCTTGACCCTGACTCTGTCTCACGG | + |
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Preference number: 3 (lower is better) Translates to: LYSPHPSGLGLR*EQRLDPDSVSR Trigger: CCGTGAGACAGAGTCAGGGTCAAGCCTCTGCTCCCACCTGAGCCCCAACCCTGAAGGGTGAGGGCTGTACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR CAA 90 bp | AACCATGTAAGTTTCCACTTCCGTGGGGAATGGCAAGGTGGGTGGTGGGGGTGGTCCCCCTTGCCTCGGTaGCCCACCTGGGAATCCCTA | + |
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Preference number: 3 (lower is better) Translates to: NHVSFHFRGEWQGGWWGWSPLPR*PTWESL Trigger: TAGGGATTCCCAGGTGGGCAACCGAGGCAAGGGGGA...CCACCCCCACCACCCACCTTGCCATTCCCCACGGAAGTGGAAACTTACATGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CCA 72 bp | CTGTCTTTGGTTTGTACAGCCCTCACCCTTCAGGGTTaGGGCTCAGGTGGGAGCAGAGGCTTGACCCTGACT | + |
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Preference number: 3 (lower is better) Translates to: LSLVCTALTLQG*GSGGSRGLTLT Trigger: AGTCAGGGTCAAGCCTCTGCTCCCACCTGAGCCCCAACCCTGAAGGGTGAGGGCTGTACAAACCAAAGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR CAA 90 bp | GGGGGTGGGACTCTGAGCCTTTCTGTATTTGGAAGAAGAGAGCATCAAGGTGACCACAAAGCTTCCCCCTaGCCTCGGTTGCCCACCTGG | + |
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Preference number: 3 (lower is better) Translates to: GGGTLSLSVFGRREHQGDHKASP*PRLPTW Trigger: CCAGGTGGGCAACCGAGGCAAGGGGGAAGCTTTGTG...GTCACCTTGATGCTCTCTTCTTCCAAATACAGAAAGGCTCAGAGTCCCACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR TCA 72 bp | TGGGGAATGGCAAGGTGGGTGGTGGGGGTGGGACTCTaGGCCTTTCTGTATTTGGAAGAAGAGAGCATCAAG | + |
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Preference number: 3 (lower is better) Translates to: WGMARWVVGVGL*AFLYLEEESIK Trigger: CTTGATGCTCTCTTCTTCCAAATACAGAAAGGCTCAGAGTCCCACCCCCACCACCCACCTTGCCATTCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR GCA 72 bp | CCCAGTGTGCAAGAATCCCTAGGTAAGCCACAGTGTTaGCAAGAAGGGACTGGGGAAACACCAAACAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: PSVQESLGKPQC*QEGTGETPNRE Trigger: CTCCCTGTTTGGTGTTTCCCCAGTCCCTTCTTGGCAACACTGTGGCTTACCTAGGGATTCTTGCACACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR CAA 90 bp | GGGGGTGGGACTCTGAGCCTTTCTGTATTTGGAAGAAGAGAGCATCAAGGTGACCGACTCGGTCTGTCTTaGGTTTGTACAGCCCTCACC | + |
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Preference number: 3 (lower is better) Translates to: GGGTLSLSVFGRREHQGDRLGLS*VCTALT Trigger: GGTGAGGGCTGTACAAACCAAAGACAGACCGAGTCG...GTCACCTTGATGCTCTCTTCTTCCAAATACAGAAAGGCTCAGAGTCCCACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR CAA 90 bp | CACCAAACAGGGAGAGAGGCTAATTTATCTTGGAGTAAAACTAGAGGCTTGTTCCCTCACCCTTCAGGGTaGGGGCTCAGGTGGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: HQTGREANLSWSKTRGLFPHPSG*GLRWEQ Trigger: CTGCTCCCACCTGAGCCCCAACCCTGAAGGGTGAGG...GAACAAGCCTCTAGTTTTACTCCAAGATAAATTAGCCTCTCTCCCTGTTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR-3UTR CAA 90 bp | AACCATGTAAGTTTCCACTTCCGTGGGGAATGGCAAGGTGGGTGGTGGGGGTGGAATGATGTCTCATGCTaGAGGCAGAAGGAAGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: NHVSFHFRGEWQGGWWGWNDVSC*RQKEAF Trigger: AAAAGCTTCCTTCTGCCTCAAGCATGAGACATCATT...CCACCCCCACCACCCACCTTGCCATTCCCCACGGAAGTGGAAACTTACATGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CCA 72 bp | TTATCTGTGTCTGCTTCAGTGAAACATTTCTTCATGTaGCTACCTCAAGCAAAACATCCTCCCACCTGTGTC | + |
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Preference number: 3 (lower is better) Translates to: LSVSASVKHFFM*LPQAKHPPTCV Trigger: GACACAGGTGGGAGGATGTTTTGCTTGAGGTAGCCACATGAAGAAATGTTTCACTGAAGCAGACACAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR TCA 72 bp | GAGCCTTTCTGTATTTGGAAGAAGAGAGCATCAAGGTaGCCTGTAACTTTGACCTTAATGATGTCTCATGCT | + |
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Preference number: 3 (lower is better) Translates to: EPFCIWKKRASR*PVTLTLMMSHA Trigger: AGCATGAGACATCATTAAGGTCAAAGTTACAGGTCACCTTGATGCTCTCTTCTTCCAAATACAGAAAGGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR GCA 72 bp | CTGTGTCTGCTTCAGGAAAACACTCCTTTACATGTCTaGCTCAACAAAACAACATCCAACACAACTGACTTT | + |
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Preference number: 3 (lower is better) Translates to: LCLLQENTPLHV*LNKTTSNTTDF Trigger: AAAGTCAGTTGTGTTGGATGTTGTTTTGTTGAGGCAGACATGTAAAGGAGTGTTTTCCTGAAGCAGACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR TCA 90 bp | CTAGGTCCTCAGAGCCCAGCTAGGGCAGGACACTACCCCTGCCCACACAGAGCTGGGGTGAGGCTGCAGTaGTGCCGGCTGCCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LGPQSPARAGHYPCPHRAGVRLQ*CRLPLS Trigger: GCTCAGTGGCAGCCGGCATCACTGCAGCCTCACCCC...AGCTCTGTGTGGGCAGGGGTAGTGTCCTGCCCTAGCTGGGCTCTGAGGACCTAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CAA 72 bp | GCCCTGGGGCTTCACAAAGCTTCCCCCTTGCCTCGGTaGCCCACCTGGGAATCCCTAGCAGACACAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ALGLHKASPLPR*PTWESLADTAG Trigger: GCCTGCTGTGTCTGCTAGGGATTCCCAGGTGGGCAACCGAGGCAAGGGGGAAGCTTTGTGAAGCCCCAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR GCA 90 bp | GCCCAGCTAGGGCAGGACACTACCCCTGCCCACACAGAGCTGTCCACATCACTGGAAGCTACCCGGCGCTaGGAACTTCCACTGCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: AQLGQDTTPAHTELSTSLEATRR*ELPLRH Trigger: ATGCCGCAGTGGAAGTTCGCAGCGCCGGGTAGCTTC...CAGTGATGTGGACAGCTCTGTGTGGGCAGGGGTAGTGTCCTGCCCTAGCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR GCA 90 bp | CACCTCACTGAGGTTCCCCTGCCTCTGACTCACCTGGATACCCTACATGCCAGGTCCACCAGCAGCAGGTaGTTGGGCTGCCCCGCATGC | + |
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Preference number: 4 (lower is better) Translates to: HLTEVPLPLTHLDTLHARSTSSR*LGCPAC Trigger: GCATGCGGGGCAGCCCAAGCACCTGCTGCTGGTGGA...CCTGGCATGTAGGGTATCCAGGTGAGTCAGAGGCAGGGGAACCTCAGTGAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | TCTGTCTCACGGGCCCAGCCAGCTGAGCGAGCACAGCTGGGAAAGGCGGCTTCCAATCCAGGGAGCGCATaGATCGAAGCACCTCAATGC | + |
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Preference number: 4 (lower is better) Translates to: SVSRAQPAERAQLGKAASNPGSA*IEAPQC Trigger: GCATTGAGGTGCTTCGATCCATGCGCTCCCTGGATT...GGAAGCCGCCTTTCCCAGCTGTGCTCGCTCAGCTGGCTGGGCCCGTGAGACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | CTAGGTCCTCAGAGCCCAGCTAGGGCAGGACACTACCCCTGCCCACACAGAGCTATGTGGCAGGCTCTCTaGTTGATGGGGTCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LGPQSPARAGHYPCPHRAMWQAL*LMGSLA Trigger: GGCCAAGGACCCCATCAACCAGAGAGCCTGCCACAT...AGCTCTGTGTGGGCAGGGGTAGTGTCCTGCCCTAGCTGGGCTCTGAGGACCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| 3UTR CAA 72 bp | TCTGCTCTAGCCCTGGGGCTTCACAAAGCTTCCCCCTaGCCTCGGTTGCCCACCTGGGAATCCCTAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SALALGLHKASP*PRLPTWESLAD Trigger: GTCTGCTAGGGATTCCCAGGTGGGCAACCGAGGCAAGGGGGAAGCTTTGTGAAGCCCCAGGGCTAGAGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR TCA 90 bp | CAGTCCCACCTAGCCGTCTGCTCTAGCCCTGGGGCTTCACAAAGCTTCCCCCTTCCTCATGGAGCCGATTaGTGGCTTCCCTCGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: QSHLAVCSSPGASQSFPLPHGAD*WLPSSP Trigger: AGGTGACGAGGGAAGCCATCAATCGGCTCCATGAGG...AAGGGGGAAGCTTTGTGAAGCCCCAGGGCTAGAGCAGACGGCTAGGTGGGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR TCA 90 bp | GGATCTGAGAGAAAGGCCTCAGCAAGGGCATCTAGGGGTAGAAGTTGGGCTGAGCCGCATGCATGCCCGTaGGGACATACTGCCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: GSERKASARASRGRSWAEPHACP*GHTAPG Trigger: ACCCGGGGCAGTATGTCCTCACGGGCATGCATGCGG...CTCAGCCCAACTTCTACCCCTAGATGCCCTTGCTGAGGCCTTTCTCTCAGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR GCA 90 bp | GCCCAGCTAGGGCAGGACACTACCCCTGCCCACACAGAGCTGTCCACATCACTGGGCTCCTGCCTCAATTaGTCCTCTGTGGGTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: AQLGQDTTPAHTELSTSLGSCLN*SSVGAM Trigger: CATTGCACCCACAGAGGAGCAATTGAGGCAGGAGCC...CAGTGATGTGGACAGCTCTGTGTGGGCAGGGGTAGTGTCCTGCCCTAGCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
||
| CDS-3UTR TCA 90 bp | AACCATGTAAGTTTCCACTTCCGTGGGGAATGGCAAGGTGGGTGGTGGGGGTGGTATGATGGTTGGCGATaGTCTGGCGGGTGGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NHVSFHFRGEWQGGWWGWYDGWR*SGGWRE Trigger: TTCCCGCCACCCGCCAGATCATCGCCAACCATCATA...CCACCCCCACCACCCACCTTGCCATTCCCCACGGAAGTGGAAACTTACATGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR TCA 90 bp | AAGAAACCATGTAAGTTTCCACTTCCGTGGGGAATGGCAAGGTGGGTGGTGGGGGCGCACAGGGCTGTGTaGCAGCCAGTCTGGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKPCKFPLPWGMARWVVGAHRAV*QPVWSP Trigger: TGGACTCCAGACTGGCTGTCACACAGCCCTGTGCGC...CCCCACCACCCACCTTGCCATTCCCCACGGAAGTGGAAACTTACATGGTTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
||
| CDS-3UTR GCA 90 bp | AAGAAACCATGTAAGTTTCCACTTCCGTGGGGAATGGCAAGGTGGGTGGTGGGGGCTGCGAACTTCCACTaGGGCATCCGCGGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KKPCKFPLPWGMARWVVGAANFH*GIRGSS Trigger: ACTGCTGCCGCGGATGCCGCAGTGGAAGTTCGCAGC...CCCCACCACCCACCTTGCCATTCCCCACGGAAGTGGAAACTTACATGGTTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR GCA 90 bp | TCCCCCTTGCCTCGGTTGCCCACCTGGGAATCCCTAGCAGACACAGCAGGCTCAATCGAAGCACCTCAATaGAGCCCATGTACCGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: SPLPRLPTWESLADTAGSIEAPQ*SPCTER Trigger: TCGTTCGGTACATGGGCTGCATTGAGGTGCTTCGAT...TGAGCCTGCTGTGTCTGCTAGGGATTCCCAGGTGGGCAACCGAGGCAAGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR GCA 90 bp | GACACTACCCCTGCCCACACAGAGCTGTCCACATCACTGTGGACACAGCCTGATGCCTTGGGCGGACTGTaGAGGTATTGCTTGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DTTPAHTELSTSLWTQPDALGGL*RYCLKR Trigger: GCGCTTCAAGCAATACCTGCACAGTCCGCCCAAGGC...ATCAGGCTGTGTCCACAGTGATGTGGACAGCTCTGTGTGGGCAGGGGTAGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
||
| CDS-3UTR GCA 90 bp | TTACTCCCATGCTGGCCCTGGCAGGTACTCCAGAACCACACAGAGGAGCCCAGTGCCACTGAGCACGCGTaGAACTTCAGGGCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPCWPWQVLQNHTEEPSATEHA*NFRASS Trigger: TGAAGATGCCCTGAAGTTGCACGCGTGCTCAGTGGC...ACTGGGCTCCTCTGTGTGGTTCTGGAGTACCTGCCAGGGCCAGCATGGGAGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | TGTGTCCACTTCAACAGAAACATCCCTTCACACGTCTACCTTGTCCCTTCACACGCAGTGCGCAGAAGGTaGTGGGCGCCTCGGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CVHFNRNIPSHVYLVPSHAVRRR*WAPRAR Trigger: CCGAGCCCGAGGCGCCCACCACCTTCTGCGCACTGC...GTGTGAAGGGACAAGGTAGACGTGTGAAGGGATGTTTCTGTTGAAGTGGACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | GGATCTGAGAGAAAGGCCTCAGCAAGGGCATCTAGGGGTAGAAGTTGGGCTGAGCCGGGCACAGCCTCATaGAGCCGATTGATGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSERKASARASRGRSWAEPGTAS*SRLMAS Trigger: GGAAGCCATCAATCGGCTCCATGAGGCTGTGCCCGG...CTCAGCCCAACTTCTACCCCTAGATGCCCTTGCTGAGGCCTTTCTCTCAGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | TCCCCCTTGCCTCGGTTGCCCACCTGGGAATCCCTAGCAGACACAGCAGGCTCACAAACAGGTCCTTCTTaGGGCTGTCCTCAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLPRLPTWESLADTAGSQTGPS*GCPQTA Trigger: TGCAGTTTGAGGACAGCCCCAAGAAGGACCTGTTTG...TGAGCCTGCTGTGTCTGCTAGGGATTCCCAGGTGGGCAACCGAGGCAAGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
||
| CDS-3UTR TCA 90 bp | GACACTACCCCTGCCCACACAGAGCTGTCCACATCACTGTGGACACAGCCTGATCACGGAGATGTTGACTaGGATGCTCATGCCGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: DTTPAHTELSTSLWTQPDHGDVD*DAHAGE Trigger: TTCGCCGGCATGAGCATCTCAGTCAACATCTCCGTG...ATCAGGCTGTGTCCACAGTGATGTGGACAGCTCTGTGTGGGCAGGGGTAGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR TCA 90 bp | GATCTGAGAGAAAGGCCTCAGCAAGGGCATCTAGGGGTAGAAGTTGGGCTGAGGCCAGGCCCTGGGTATTaGCATACAGGTGCTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DLRERPQQGHLGVEVGLRPGPGY*HTGAPR Trigger: ACGAGGAGCACCTGTATGTCAATACCCAGGGCCTGG...CCTCAGCCCAACTTCTACCCCTAGATGCCCTTGCTGAGGCCTTTCTCTCAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
||
| CDS-3UTR TCA 90 bp | TTACTCCCATGCTGGCCCTGGCAGGTACTCCAGAACCACACAGAGGAGCCCAGTTGTGCAGGTATTGCTTaGAGCGCAGCTCAAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLPCWPWQVLQNHTEEPSCAGIA*SAAQRL Trigger: AAGCCTTTGAGCTGCGCTTCAAGCAATACCTGCACA...ACTGGGCTCCTCTGTGTGGTTCTGGAGTACCTGCCAGGGCCAGCATGGGAGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | GCTAATTTATCTTGGAGTAAAACTAGAGGCTTGTTCACTGTTGGTGAACAGGGGGTGCGCAGAAGGTGGTaGGCGCCTCGGGCTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ANLSWSKTRGLFTVGEQGVRRRW*APRARG Trigger: CCCCCGAGCCCGAGGCGCCCACCACCTTCTGCGCAC...CCCCTGTTCACCAACAGTGAACAAGCCTCTAGTTTTACTCCAAGATAAATTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | AACCATGTAAGTTTCCACTTCCGTGGGGAATGGCAAGGTGGGTGGTGGGGGTGGTGCTTTTCCCCAAGATaGAGGCCAGAGCCTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NHVSFHFRGEWQGGWWGWCFSPR*RPEPCW Trigger: CCAACAAGGCTCTGGCCTCCATCTTGGGGAAAAGCA...CCACCCCCACCACCCACCTTGCCATTCCCCACGGAAGTGGAAACTTACATGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR TCA 90 bp | GGGGGTGGGACTCTGAGCCTTTCTGTATTTGGAAGAAGAGAGCATCAAGGTGACCCTGTGTTCGGGTGTTaGAATCCAGGGAGCGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GGGTLSLSVFGRREHQGDPVFGC*NPGSAW Trigger: CCATGCGCTCCCTGGATTTCAACACCCGAACACAGG...GTCACCTTGATGCTCTCTTCTTCCAAATACAGAAAGGCTCAGAGTCCCACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR GCA 90 bp | ACAGTGTTGCCAAGAAGGGACTGGGGAAACACCAAACAGGGAGAGAGGCTAATTTTGGGCTGCCCCGCATaGATGCCCGTGAGGACATAC | + |
|
Preference number: 4 (lower is better) Translates to: TVLPRRDWGNTKQGERLILGCPA*MPVRTY Trigger: GTATGTCCTCACGGGCATGCATGCGGGGCAGCCCAA...AATTAGCCTCTCTCCCTGTTTGGTGTTTCCCCAGTCCCTTCTTGGCAACACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | ACAGTGTTGCCAAGAAGGGACTGGGGAAACACCAAACAGGGAGAGAGGCTAATTGGGGCACTACCGCCTTaGGCGGACTGTGCAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TVLPRRDWGNTKQGERLIGALPP*ADCAGI Trigger: AATACCTGCACAGTCCGCCCAAGGCGGTAGTGCCCC...AATTAGCCTCTCTCCCTGTTTGGTGTTTCCCCAGTCCCTTCTTGGCAACACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
||
| 3UTR CAA 72 bp | ATGTCTTCGTTAAAGGCGACTCGGTCTGTCTTTGGTTaGTACAGCCCTCACCCTTCAGGGTTGGGGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MSSLKATRSVFG*YSPHPSGLGLR Trigger: CCTGAGCCCCAACCCTGAAGGGTGAGGGCTGTACAAACCAAAGACAGACCGAGTCGCCTTTAACGAAGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR GCA 90 bp | CACCAAACAGGGAGAGAGGCTAATTTATCTTGGAGTAAAACTAGAGGCTTGTTCACCCTGGCATCGGGATaGAACCAGCCGTGCGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HQTGREANLSWSKTRGLFTLASG*NQPCAG Trigger: GCCGGCGCACGGCTGGTTGCATCCCGATGCCAGGGT...GAACAAGCCTCTAGTTTTACTCCAAGATAAATTAGCCTCTCTCCCTGTTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | GGATCTGAGAGAAAGGCCTCAGCAAGGGCATCTAGGGGTAGAAGTTGGGCTGAGCAGCATTCCAAGATGTaGCAGGCTCTCTGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSERKASARASRGRSWAEQHSKM*QALWLM Trigger: CATCAACCAGAGAGCCTGCCACATCTTGGAATGCTG...CTCAGCCCAACTTCTACCCCTAGATGCCCTTGCTGAGGCCTTTCTCTCAGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | GCTTCAGGATCTGAGAGAAAGGCCTCAGCAAGGGCATCTAGGGGTAGAAGTTGGACAGCATCCAGGCCCTaGGTATTGACATACAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASGSERKASARASRGRSWTASRP*VLTYRC Trigger: GCACCTGTATGTCAATACCCAGGGCCTGGATGCTGT...CCAACTTCTACCCCTAGATGCCCTTGCTGAGGCCTTTCTCTCAGATCCTGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | TGTGTCCACTTCAACAGAAACATCCCTTCACACGTCTACCTTGTCCCTTCACACTCAATTGCTCCTCTGTaGGTGCAATGGGGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVHFNRNIPSHVYLVPSHSIAPL*VQWGPC Trigger: GCAGGGCCCCCATTGCACCCACAGAGGAGCAATTGA...GTGTGAAGGGACAAGGTAGACGTGTGAAGGGATGTTTCTGTTGAAGTGGACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR GCA 90 bp | CACCAAACAGGGAGAGAGGCTAATTTATCTTGGAGTAAAACTAGAGGCTTGTTCTTGCTCCTCTGTGGGTaGAATGGGGGCCCTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HQTGREANLSWSKTRGLFLLLCG*NGGPAG Trigger: ACCCGCAGGGCCCCCATTGCACCCACAGAGGAGCAA...GAACAAGCCTCTAGTTTTACTCCAAGATAAATTAGCCTCTCTCCCTGTTTGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | GCTAATTTATCTTGGAGTAAAACTAGAGGCTTGTTCACTGTTGGTGAACAGGGGCGGCTCATTCGTCCGTaGTACCAGGGCTCCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ANLSWSKTRGLFTVGEQGRLIRP*YQGSCL Trigger: GAGGCAGGAGCCCTGGTACCACGGACGAATGAGCCG...CCCCTGTTCACCAACAGTGAACAAGCCTCTAGTTTTACTCCAAGATAAATTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR GCA 90 bp | AAGAAACCATGTAAGTTTCCACTTCCGTGGGGAATGGCAAGGTGGGTGGTGGGGGCTCCTTTCCCGGAATaGTGTTGTAGTAATTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KKPCKFPLPWGMARWVVGAPFPE*CCSNCG Trigger: ACCACAATTACTACAACAGCATTCCGGGAAAGGAGC...CCCCACCACCCACCTTGCCATTCCCCACGGAAGTGGAAACTTACATGGTTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | TGCCTCAACAAAACAACATCCAACACAACTGACTTTCTAAAGAAACCATGTAAGCGGGCCCCAGGACCCTaGCATCGGGATGCAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLNKTTSNTTDFLKKPCKRAPGP*HRDATS Trigger: GCTGGTTGCATCCCGATGCCAGGGTCCTGGGGCCCG...CTTACATGGTTTCTTTAGAAAGTCAGTTGTGTTGGATGTTGTTTTGTTGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | ACAGTGTTGCCAAGAAGGGACTGGGGAAACACCAAACAGGGAGAGAGGCTAATTGGCATCTCTCCATACTaGTGTCATTCCCTGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVLPRRDWGNTKQGERLIGISPY*CHSLSK Trigger: CTTGGACAGGGAATGACACCAGTATGGAGAGATGCC...AATTAGCCTCTCTCCCTGTTTGGTGTTTCCCCAGTCCCTTCTTGGCAACACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | AACACTCCTTTACATGTCTGCCTCAACAAAACAACATCCAACACAACTGACTTTCCAGCAGCAGGTGCTTaGGCTGCCCCGCATGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: NTPLHVCLNKTTSNTTDFPAAGA*AAPHAC Trigger: GCATGCATGCGGGGCAGCCCAAGCACCTGCTGCTGG...AAAGTCAGTTGTGTTGGATGTTGTTTTGTTGAGGCAGACATGTAAAGGAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR GCA 90 bp | TGTGTCCACTTCAACAGAAACATCCCTTCACACGTCTACCTTGTCCCTTCACACGGACTGTGCAGGTATTaGTTGAAGCGCAGCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CVHFNRNIPSHVYLVPSHGLCRY*LKRSSK Trigger: CTTTGAGCTGCGCTTCAAGCAATACCTGCACAGTCC...GTGTGAAGGGACAAGGTAGACGTGTGAAGGGATGTTTCTGTTGAAGTGGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CCA 90 bp | TGCCTCAACAAAACAACATCCAACACAACTGACTTTCTAAAGAAACCATGTAAGCAGCCCGCCCAGGGGTaGCTCCTTTCCCGGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLNKTTSNTTDFLKKPCKQPAQG*LLSRNA Trigger: AGCATTCCGGGAAAGGAGCCACCCCTGGGCGGGCTG...CTTACATGGTTTCTTTAGAAAGTCAGTTGTGTTGGATGTTGTTTTGTTGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR GCA 90 bp | TGCCTCAACAAAACAACATCCAACACAACTGACTTTCTAAAGAAACCATGTAAGCCGAAGCAGCTTCTCTaGAGCCCGACGGCTCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: CLNKTTSNTTDFLKKPCKPKQLL*SPTAHS Trigger: CGAATGAGCCGTCGGGCTGCAGAGAAGCTGCTTCGG...CTTACATGGTTTCTTTAGAAAGTCAGTTGTGTTGGATGTTGTTTTGTTGAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 90 bp | GCTACCCGGCGCTGCGAACTTCCACTGCGGCATCCGCGGCAGCAGTaGGCAGAAGGTGGTGGGCGCCTCGGGCTCGGGGGCCGCGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ATRRCELPLRHPRQQ*AEGGGRLGLGGRAA Trigger: GGCCGCGCGGCCCCCGAGCCCGAGGCGCCCACCACCTTCTGCGCACTGCTGCCGCGGATGCCGCAGTGGAAGTTCGCAGCGCCGGGTAGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS CCA 90 bp | CTGCGAACTTCCACTGCGGCATCCGCGGCAGCAGTGCGCAGAAGGTaGTGGGCGCCTCGGGCTCGGGGGCCGCGCGGCCACCCGGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRTSTAASAAAVRRR*WAPRARGPRGHPDP Trigger: AGGGTCCGGGTGGCCGCGCGGCCCCCGAGCCCGAGGCGCCCACCACCTTCTGCGCACTGCTGCCGCGGATGCCGCAGTGGAAGTTCGCAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 90 bp | GCGGGACCGCGGCCCAGGAAGCTACCCGGCGCTGCGAACTTCCACTaGGGCATCCGCGGCAGCAGTGCGCAGAAGGTGGTGGGCGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AGPRPRKLPGAANFH*GIRGSSAQKVVGAS Trigger: CGAGGCGCCCACCACCTTCTGCGCACTGCTGCCGCGGATGCCGCAGTGGAAGTTCGCAGCGCCGGGTAGCTTCCTGGGCCGCGGTCCCGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 90 bp | CACGCGCGTCGCCGCGGGACCGCGGCCCAGGAAGCTACCCGGCGCTaGGAACTTCCACTGCGGCATCCGCGGCAGCAGTGCGCAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HARRRGTAAQEATRR*ELPLRHPRQQCAEG Trigger: ACCTTCTGCGCACTGCTGCCGCGGATGCCGCAGTGGAAGTTCGCAGCGCCGGGTAGCTTCCTGGGCCGCGGTCCCGCGGCGACGCGCGTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS TCA 90 bp | TTCCCTGTCCAAGGCCCCCGAGTGTCGCCAGCGCACAGGGCTGTGTaGCAGCCAGTCTGGAGTCCACCAGCCCGCCCAGGGGTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FPVQGPRVSPAHRAV*QPVWSPPARPGVAP Trigger: AGGAGCCACCCCTGGGCGGGCTGGTGGACTCCAGACTGGCTGTCACACAGCCCTGTGCGCTGGCGACACTCGGGGGCCTTGGACAGGGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS TCA 90 bp | CCCAGGACCCTGGCATCGGGATGCAACCAGCCGTGCGCCGGCTTGTaGATGAAGCCGCCCTTGCGCACCCACTCGTCAGCGACATCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRTLASGCNQPCAGL*MKPPLRTHSSATSG Trigger: TCCGGATGTCGCTGACGAGTGGGTGCGCAAGGGCGGCTTCATTCACAAGCCGGCGCACGGCTGGTTGCATCCCGATGCCAGGGTCCTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 90 bp | GCCCGACGGCTCATTCGTCCGTGGTACCAGGGCTCCTGCCTCAATTaGTCCTCTGTGGGTGCAATGGGGGCCCTGCGGGTAGGGGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: ARRLIRPWYQGSCLN*SSVGAMGALRVGGL Trigger: CAGTCCCCCTACCCGCAGGGCCCCCATTGCACCCACAGAGGAGCAATTGAGGCAGGAGCCCTGGTACCACGGACGAATGAGCCGTCGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS TCA 90 bp | GGACCCTGGCATCGGGATGCAACCAGCCGTGCGCCGGCTTGTGAATaGAGCCGCCCTTGCGCACCCACTCGTCAGCGACATCCGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPWHRDATSRAPACE*SRPCAPTRQRHPES Trigger: TGACTCCGGATGTCGCTGACGAGTGGGTGCGCAAGGGCGGCTTCATTCACAAGCCGGCGCACGGCTGGTTGCATCCCGATGCCAGGGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 90 bp | TCGTCCGTGGTACCAGGGCTCCTGCCTCAATTGCTCCTCTGTGGGTaGAATGGGGGCCCTGCGGGTAGGGGGACTGGGCCACTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSVVPGLLPQLLLCG*NGGPAGRGTGPLVF Trigger: GAAGACCAGTGGCCCAGTCCCCCTACCCGCAGGGCCCCCATTGCACCCACAGAGGAGCAATTGAGGCAGGAGCCCTGGTACCACGGACGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CAA 90 bp | CTAGGTCCTCAGAGCCCAGCTAGGGCAGGACACTACCCCTGCCCACACAGAGCTACCAGCAGCAGGTGCTaGGGCTGCCCCGCATGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LGPQSPARAGHYPCPHRATSSRC*GCPACM Trigger: CATGCATGCGGGGCAGCCCAAGCACCTGCTGCTGGT...AGCTCTGTGTGGGCAGGGGTAGTGTCCTGCCCTAGCTGGGCTCTGAGGACCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
||
| CDS CCA 90 bp | ATCCAGGCCCTGGGTATTGACATACAGGTGCTCCTCGTAGTCATGTaGCCCTCGGGCATCTGCCTGCACGTAGCCATCCCCCGGTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IQALGIDIQVLLVVM*PSGICLHVAIPRWG Trigger: GCCCCACCGGGGGATGGCTACGTGCAGGCAGATGCCCGAGGGCCACATGACTACGAGGAGCACCTGTATGTCAATACCCAGGGCCTGGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS CCA 90 bp | TCGGCCCGAAGCAGCTTCTCTGCAGCCCGACGGCTCATTCGTCCGTaGTACCAGGGCTCCTGCCTCAATTGCTCCTCTGTGGGTGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SARSSFSAARRLIRP*YQGSCLNCSSVGAM Trigger: CATTGCACCCACAGAGGAGCAATTGAGGCAGGAGCCCTGGTACCACGGACGAATGAGCCGTCGGGCTGCAGAGAAGCTGCTTCGGGCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CAA 90 bp | TCTGTCTCACGGGCCCAGCCAGCTGAGCGAGCACAGCTGGGAAAGGCGGCTTCCACCTGTGTTCGGGTGTaGAAATCCAGGGAGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRAQPAERAQLGKAASTCVRV*KSRERM Trigger: CATGCGCTCCCTGGATTTCAACACCCGAACACAGGT...GGAAGCCGCCTTTCCCAGCTGTGCTCGCTCAGCTGGCTGGGCCCGTGAGACAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CAA 90 bp | GCCCAGCTAGGGCAGGACACTACCCCTGCCCACACAGAGCTGTCCACATCACTGGCGCAGCTCAAAGGCTaGCCCTACGGTGCTGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: AQLGQDTTPAHTELSTSLAQLKG*PYGADD Trigger: GTCATCAGCACCGTAGGGCAAGCCTTTGAGCTGCGC...CAGTGATGTGGACAGCTCTGTGTGGGCAGGGGTAGTGTCCTGCCCTAGCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CAA 90 bp | TTACTCCCATGCTGGCCCTGGCAGGTACTCCAGAACCACACAGAGGAGCCCAGTGGGGGCACTACCGCCTaGGGCGGACTGTGCAGGTAT | + |
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Preference number: 5 (lower is better) Translates to: LLPCWPWQVLQNHTEEPSGGTTA*GGLCRY Trigger: ATACCTGCACAGTCCGCCCAAGGCGGTAGTGCCCCC...ACTGGGCTCCTCTGTGTGGTTCTGGAGTACCTGCCAGGGCCAGCATGGGAGTAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS TCA 90 bp | CCTCGGCGGTGTCCTCAAGCTCCACAGCATCCAGGCCCTGGGTATTaGCATACAGGTGCTCCTCGTAGTCATGTGGCCCTCGGGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: PRRCPQAPQHPGPGY*HTGAPRSHVALGHL Trigger: CAGATGCCCGAGGGCCACATGACTACGAGGAGCACCTGTATGTCAATACCCAGGGCCTGGATGCTGTGGAGCTTGAGGACACCGCCGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS CCA 90 bp | GGGCTGTGTGACAGCCAGTCTGGAGTCCACCAGCCCGCCCAGGGGTaGCTCCTTTCCCGGAATGCTGTTGTAGTAATTGTGGTCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GLCDSQSGVHQPAQG*LLSRNAVVVIVVCS Trigger: GCTGCAGACCACAATTACTACAACAGCATTCCGGGAAAGGAGCCACCCCTGGGCGGGCTGGTGGACTCCAGACTGGCTGTCACACAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 90 bp | GTCTGGAGTCCACCAGCCCGCCCAGGGGTGGCTCCTTTCCCGGAATaGTGTTGTAGTAATTGTGGTCTGCAGCAGCGTCATCATCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: VWSPPARPGVAPFPE*CCSNCGLQQRHHLP Trigger: GGGGAGATGATGACGCTGCTGCAGACCACAATTACTACAACAGCATTCCGGGAAAGGAGCCACCCCTGGGCGGGCTGGTGGACTCCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 90 bp | CATGTCAAACAGGTCCTTCTTGGGGCTGTCCTCAAACTGCAGAGGTaGCTCGGCGGTGTCCTCAAGCTCCACAGCATCCAGGCCCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: HVKQVLLGAVLKLQR*LGGVLKLHSIQALG Trigger: ACCCAGGGCCTGGATGCTGTGGAGCTTGAGGACACCGCCGAGGCACCTCTGCAGTTTGAGGACAGCCCCAAGAAGGACCTGTTTGACATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CAA 90 bp | TTACTCCCATGCTGGCCCTGGCAGGTACTCCAGAACCACACAGAGGAGCCCAGTGCCTCATGGAGCCGATaGATGGCTTCCCTCGTCACC | + |
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Preference number: 5 (lower is better) Translates to: LLPCWPWQVLQNHTEEPSASWSR*MASLVT Trigger: GGTGACGAGGGAAGCCATCAATCGGCTCCATGAGGC...ACTGGGCTCCTCTGTGTGGTTCTGGAGTACCTGCCAGGGCCAGCATGGGAGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CAA 90 bp | CAGTCCCACCTAGCCGTCTGCTCTAGCCCTGGGGCTTCACAAAGCTTCCCCCTTTCCAGGCCCTGGGTATaGACATACAGGTGCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: QSHLAVCSSPGASQSFPLSRPWV*TYRCSS Trigger: CGAGGAGCACCTGTATGTCAATACCCAGGGCCTGGA...AAGGGGGAAGCTTTGTGAAGCCCCAGGGCTAGAGCAGACGGCTAGGTGGGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 90 bp | AAGGGTCGCATGTCAAACAGGTCCTTCTTGGGGCTGTCCTCAAACTaGAGAGGTGCCTCGGCGGTGTCCTCAAGCTCCACAGCATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: KGRMSNRSFLGLSSN*RGASAVSSSSTASR Trigger: CCTGGATGCTGTGGAGCTTGAGGACACCGCCGAGGCACCTCTGCAGTTTGAGGACAGCCCCAAGAAGGACCTGTTTGACATGCGACCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CAA 90 bp | CTAGGTCCTCAGAGCCCAGCTAGGGCAGGACACTACCCCTGCCCACACAGAGCTCTGTGCAGGTATTGCTaGAAGCGCAGCTCAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LGPQSPARAGHYPCPHRALCRYC*KRSSKA Trigger: AGCCTTTGAGCTGCGCTTCAAGCAATACCTGCACAG...AGCTCTGTGTGGGCAGGGGTAGTGTCCTGCCCTAGCTGGGCTCTGAGGACCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CAA 90 bp | TCCCCCTTGCCTCGGTTGCCCACCTGGGAATCCCTAGCAGACACAGCAGGCTCACGGACTGTGCAGGTATaGCTTGAAGCGCAGCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: SPLPRLPTWESLADTAGSRTVQV*LEAQLK Trigger: TTTGAGCTGCGCTTCAAGCAATACCTGCACAGTCCG...TGAGCCTGCTGTGTCTGCTAGGGATTCCCAGGTGGGCAACCGAGGCAAGGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS TCA 90 bp | GGTGGCGGGAACAGACAAGTTAAGGCCGTCCACGGAGATGTTGACTaGGATGCTCATGCCGGCGAAGCGCAGGTTGCTTTTCCCCAAGAT | + |
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Preference number: 5 (lower is better) Translates to: GGGNRQVKAVHGDVD*DAHAGEAQVAFPQD Trigger: ATCTTGGGGAAAAGCAACCTGCGCTTCGCCGGCATGAGCATCTCAGTCAACATCTCCGTGGACGGCCTTAACTTGTCTGTTCCCGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CAA 90 bp | GCTTCAGGATCTGAGAGAAAGGCCTCAGCAAGGGCATCTAGGGGTAGAAGTTGGCCGTCCACGGAGATGTaGACTGAGATGCTCATGCCG | + |
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Preference number: 5 (lower is better) Translates to: ASGSERKASARASRGRSWPSTEM*TEMLMP Trigger: CGGCATGAGCATCTCAGTCAACATCTCCGTGGACGG...CCAACTTCTACCCCTAGATGCCCTTGCTGAGGCCTTTCTCTCAGATCCTGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CAA 90 bp | GCTTCAGGATCTGAGAGAAAGGCCTCAGCAAGGGCATCTAGGGGTAGAAGTTGGTCAAACAGGTCCTTCTaGGGGCTGTCCTCAAACTGC | + |
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Preference number: 5 (lower is better) Translates to: ASGSERKASARASRGRSWSNRSF*GLSSNC Trigger: GCAGTTTGAGGACAGCCCCAAGAAGGACCTGTTTGA...CCAACTTCTACCCCTAGATGCCCTTGCTGAGGCCTTTCTCTCAGATCCTGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CAA 90 bp | AACACTCCTTTACATGTCTGCCTCAACAAAACAACATCCAACACAACTGACTTTGGGCTCCTGCCTCAATaGCTCCTCTGTGGGTGCAAT | + |
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Preference number: 5 (lower is better) Translates to: NTPLHVCLNKTTSNTTDFGLLPQ*LLCGCN Trigger: ATTGCACCCACAGAGGAGCAATTGAGGCAGGAGCCC...AAAGTCAGTTGTGTTGGATGTTGTTTTGTTGAGGCAGACATGTAAAGGAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS-3UTR CAA 90 bp | TGCCTCAACAAAACAACATCCAACACAACTGACTTTCTAAAGAAACCATGTAAGACATACTGCCCCGGGTaGGTGACGCTGTCTCTCACA | + |
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Preference number: 5 (lower is better) Translates to: CLNKTTSNTTDFLKKPCKTYCPG*VTLSLT Trigger: TGTGAGAGACAGCGTCACCAACCCGGGGCAGTATGT...CTTACATGGTTTCTTTAGAAAGTCAGTTGTGTTGGATGTTGTTTTGTTGAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 72 bp | CGCTGCGAACTTCCACTGCGGCATCCGCGGCAGCAGTaGGCAGAAGGTGGTGGGCGCCTCGGGCTCGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RCELPLRHPRQQ*AEGGGRLGLGG Trigger: GCCCCCGAGCCCGAGGCGCCCACCACCTTCTGCGCACTGCTGCCGCGGATGCCGCAGTGGAAGTTCGCAGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 72 bp | CGGCCCAGGAAGCTACCCGGCGCTGCGAACTTCCACTaGGGCATCCGCGGCAGCAGTGCGCAGAAGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: RPRKLPGAANFH*GIRGSSAQKVV Trigger: CACCACCTTCTGCGCACTGCTGCCGCGGATGCCGCAGTGGAAGTTCGCAGCGCCGGGTAGCTTCCTGGGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 72 bp | CAGGTGCTCCTCGTAGTCATGTGGCCCTCGGGCATCTaGCTGCACGTAGCCATCCCCCGGTGGGGCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QVLLVVMWPSGI*LHVAIPRWGCS Trigger: GGAGCAGCCCCACCGGGGGATGGCTACGTGCAGGCAGATGCCCGAGGGCCACATGACTACGAGGAGCACCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS TCA 72 bp | CTGGCATCGGGATGCAACCAGCCGTGCGCCGGCTTGTaGATGAAGCCGCCCTTGCGCACCCACTCGTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: LASGCNQPCAGL*MKPPLRTHSSA Trigger: CGCTGACGAGTGGGTGCGCAAGGGCGGCTTCATTCACAAGCCGGCGCACGGCTGGTTGCATCCCGATGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS CCA 72 bp | ACCGAACGATGTAAGAGACCCCGGGCCCCAGGACCCTaGCATCGGGATGCAACCAGCCGTGCGCCGGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: TERCKRPRAPGP*HRDATSRAPAC Trigger: ACAAGCCGGCGCACGGCTGGTTGCATCCCGATGCCAGGGTCCTGGGGCCCGGGGTCTCTTACATCGTTCGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS CAA 90 bp | AGCCCGACGGCTCATTCGTCCGTGGTACCAGGGCTCCTGCCTCAATaGCTCCTCTGTGGGTGCAATGGGGGCCCTGCGGGTAGGGGGACT | + |
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Preference number: 6 (lower is better) Translates to: SPTAHSSVVPGLLPQ*LLCGCNGGPAGRGT Trigger: AGTCCCCCTACCCGCAGGGCCCCCATTGCACCCACAGAGGAGCAATTGAGGCAGGAGCCCTGGTACCACGGACGAATGAGCCGTCGGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS TCA 72 bp | CATCGGGATGCAACCAGCCGTGCGCCGGCTTGTGAATaGAGCCGCCCTTGCGCACCCACTCGTCAGCGACAT | + |
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Preference number: 6 (lower is better) Translates to: HRDATSRAPACE*SRPCAPTRQRH Trigger: ATGTCGCTGACGAGTGGGTGCGCAAGGGCGGCTTCATTCACAAGCCGGCGCACGGCTGGTTGCATCCCGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS TCA 72 bp | TGGGCCACTGGTCTTCCAGAGGGGGTGAGGCTGCAGTaGTGCCGGCTGCCACTGAGCACGCGTGCAACTTCA | + |
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Preference number: 6 (lower is better) Translates to: WATGLPEGVRLQ*CRLPLSTRATS Trigger: TGAAGTTGCACGCGTGCTCAGTGGCAGCCGGCATCACTGCAGCCTCACCCCCTCTGGAAGACCAGTGGCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 72 bp | CACAAGGAAGTCCCCATCGGCCCGAAGCAGCTTCTCTaGAGCCCGACGGCTCATTCGTCCGTGGTACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: HKEVPIGPKQLL*SPTAHSSVVPG Trigger: CCCTGGTACCACGGACGAATGAGCCGTCGGGCTGCAGAGAAGCTGCTTCGGGCCGATGGGGACTTCCTTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS CAA 72 bp | GCTCATTCGTCCGTGGTACCAGGGCTCCTGCCTCAATaGCTCCTCTGTGGGTGCAATGGGGGCCCTGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: AHSSVVPGLLPQ*LLCGCNGGPAG Trigger: ACCCGCAGGGCCCCCATTGCACCCACAGAGGAGCAATTGAGGCAGGAGCCCTGGTACCACGGACGAATGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 72 bp | GGGGGCACTACCGCCTTGGGCGGACTGTGCAGGTATTaGTTGAAGCGCAGCTCAAAGGCTTGCCCTACGGTG | + |
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Preference number: 6 (lower is better) Translates to: GGTTALGGLCRY*LKRSSKACPTV Trigger: CACCGTAGGGCAAGCCTTTGAGCTGCGCTTCAAGCAATACCTGCACAGTCCGCCCAAGGCGGTAGTGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS CAA 72 bp | TCCAGCCCAGTCAGCCTTTCAGGGGGCACTACCGCCTaGGGCGGACTGTGCAGGTATTGCTTGAAGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSPVSLSGGTTA*GGLCRYCLKRS Trigger: GCTGCGCTTCAAGCAATACCTGCACAGTCCGCCCAAGGCGGTAGTGCCCCCTGAAAGGCTGACTGGGCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS CAA 90 bp | GCCAACTCCTCCAGCCCAGTCAGCCTTTCAGGGGGCACTACCGCCTaGGGCGGACTGTGCAGGTATTGCTTGAAGCGCAGCTCAAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: ANSSSPVSLSGGTTA*GGLCRYCLKRSSKA Trigger: AGCCTTTGAGCTGCGCTTCAAGCAATACCTGCACAGTCCGCCCAAGGCGGTAGTGCCCCCTGAAAGGCTGACTGGGCTGGAGGAGTTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS CCA 72 bp | CATGTCCCAAGGCAAGCCACGGGCATCTCTCCATACTaGTGTCATTCCCTGTCCAAGGCCCCCGAGTGTCGC | + |
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Preference number: 6 (lower is better) Translates to: HVPRQATGISPY*CHSLSKAPECR Trigger: GCGACACTCGGGGGCCTTGGACAGGGAATGACACCAGTATGGAGAGATGCCCGTGGCTTGCCTTGGGACATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS CAA 90 bp | TGGCGGGTGGCGGGAACAGACAAGTTAAGGCCGTCCACGGAGATGTaGACTGAGATGCTCATGCCGGCGAAGCGCAGGTTGCTTTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: WRVAGTDKLRPSTEM*TEMLMPAKRRLLFP Trigger: GGGGAAAAGCAACCTGCGCTTCGCCGGCATGAGCATCTCAGTCAACATCTCCGTGGACGGCCTTAACTTGTCTGTTCCCGCCACCCGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS CCA 72 bp | GACAGCCAGTCTGGAGTCCACCAGCCCGCCCAGGGGTaGCTCCTTTCCCGGAATGCTGTTGTAGTAATTGTG | + |
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Preference number: 6 (lower is better) Translates to: DSQSGVHQPAQG*LLSRNAVVVIV Trigger: CACAATTACTACAACAGCATTCCGGGAAAGGAGCCACCCCTGGGCGGGCTGGTGGACTCCAGACTGGCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS TCA 72 bp | TGTCCTCAAGCTCCACAGCATCCAGGCCCTGGGTATTaGCATACAGGTGCTCCTCGTAGTCATGTGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: CPQAPQHPGPGY*HTGAPRSHVAL Trigger: GAGGGCCACATGACTACGAGGAGCACCTGTATGTCAATACCCAGGGCCTGGATGCTGTGGAGCTTGAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS GCA 72 bp | ATGTCAAACAGGTCCTTCTTGGGGCTGTCCTCAAACTaGAGAGGTGCCTCGGCGGTGTCCTCAAGCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: MSNRSFLGLSSN*RGASAVSSSST Trigger: TGTGGAGCTTGAGGACACCGCCGAGGCACCTCTGCAGTTTGAGGACAGCCCCAAGAAGGACCTGTTTGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS CAA 72 bp | CGATTGATGGCTTCCCTCGTCACCTGTGTTCGGGTGTaGAAATCCAGGGAGCGCATGGATCGAAGCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: RLMASLVTCVRV*KSRERMDRSTS Trigger: TGAGGTGCTTCGATCCATGCGCTCCCTGGATTTCAACACCCGAACACAGGTGACGAGGGAAGCCATCAATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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| CDS TCA 72 bp | AACAGACAAGTTAAGGCCGTCCACGGAGATGTTGACTaGGATGCTCATGCCGGCGAAGCGCAGGTTGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: NRQVKAVHGDVD*DAHAGEAQVAF Trigger: AAAAGCAACCTGCGCTTCGCCGGCATGAGCATCTCAGTCAACATCTCCGTGGACGGCCTTAACTTGTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020564.7 |
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