Pregenerated sensors for SHC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042626Ensembl transcript IDs: ENSMUST00000039110.12, ENSMUST00000094378.10, ENSMUST00000107417.9, ENSMUST00000191485.7
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGATTGTCTACTGCTTCAGTCTTATTGCCTCCACAAAACCCACACTaGCTGTACACACCCTGGAGGCCCAAGTCAGACGCACACACCTAT | + |
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Preference number: 1 (lower is better) Translates to: GLSTASVLLPPQNPH*LYTPWRPKSDAHTY Trigger: ATAGGTGTGTGCGTCTGACTTGGGCCTCCAGGGTGTGTACAGTCAGTGTGGGTTTTGTGGAGGCAATAAGACTGAAGCAGTAGACAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR TCA 90 bp | AAAAATTTGGCGACCATTCCTTGTCCAGAAAGCCTACACACAGAGTaGGCTTGCAAGGTTTCTGTGCTGGCTGCAGCTGCCCGAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: KNLATIPCPESLHTE*ACKVSVLAAAARKQ Trigger: CTGCTTTCGGGCAGCTGCAGCCAGCACAGAAACCTTGCAAGCTCACTCTGTGTGTAGGCTTTCTGGACAAGGAATGGTCGCCAAATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR CCA 90 bp | ATGAAGACTATTTCCCTTTGGTATAAGACATCCAAACCAAAAATTTaGCGACCATTCCTTGTCCAGAAAGCCTACACACAGAGTGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: MKTISLWYKTSKPKI*RPFLVQKAYTQSEL Trigger: AAGCTCACTCTGTGTGTAGGCTTTCTGGACAAGGAATGGTCGCCAAATTTTTGGTTTGGATGTCTTATACCAAAGGGAAATAGTCTTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR GCA 90 bp | AGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGGCCCCCCAAAGGGCAGTTaGTCCACTGGGCCTATCATC | + |
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Preference number: 2 (lower is better) Translates to: RRTHLSQRREAGWGYSEGPPKGS*STGPII Trigger: GATGATAGGCCCAGTGGAGCAACTGCCCTTTGGGGG...GCCCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCTCCAGAAGCCAAGGTGGCAGTAACCCCTGTCCACACGTGAAGGGCCTGGAGTGGGATATGTTATaGGGGATCTGGGGTACCCTG | + |
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Preference number: 2 (lower is better) Translates to: QGSRSQGGSNPCPHVKGLEWDML*GIWGTL Trigger: CAGGGTACCCCAGATCCCGCATAACATATCCCACTC...CAGGCCCTTCACGTGTGGACAGGGGTTACTGCCACCTTGGCTTCTGGAGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGTGGCCAGAGGCAGGATaGTACCCCAGGCTCCTTACT | + |
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Preference number: 2 (lower is better) Translates to: SDAHTYPKGGRQDGVTVRWPEAG*YPRLLT Trigger: AGTAAGGAGCCTGGGGTAGCATCCTGCCTCTGGCCA...CCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR CAA 90 bp | GGAGCAGGCTTGAGAAATGTATACAGACCCCTTGGAGGAAAGGCATaGAGGTCAGGAGGCACTGAGCAAGATGGGTCCAGTCCTGCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GAGLRNVYRPLGGKA*RSGGTEQDGSSPAP Trigger: AGGGGCAGGACTGGACCCATCTTGCTCAGTGCCTCCTGACCTCAATGCCTTTCCTCCAAGGGGTCTGTATACATTTCTCAAGCCTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR GCA 90 bp | CACATCCGAAAGGCAGAGCAGATAGCGGCCACTCCTGTCCCTATTCTCCCTAGAGAGTGGGATATGTTATaGGGGATCTGGGGTACCCTG | + |
|
Preference number: 2 (lower is better) Translates to: HIRKAEQIAATPVPILPREWDML*GIWGTL Trigger: CAGGGTACCCCAGATCCCGCATAACATATCCCACTC...TCTAGGGAGAATAGGGACAGGAGTGGCCGCTATCTGCTCTGCCTTTCGGATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR CCA 90 bp | AGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGGCTCAGGAAGAAGGCTCTaGGGTAATCGCTCTTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: RRTHLSQRREAGWGYSEGSGRRL*GNRSFW Trigger: CCAAAAAGAGCGATTACCCCAGAGCCTTCTTCCTGA...GCCCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR CAA 90 bp | TTTGGCGACCATTCCTTGTCCAGAAAGCCTACACACAGAGTGAGCTaGCAAGGTTTCTGTGCTGGCTGCAGCTGCCCGAAAGCAGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: FGDHSLSRKPTHRVS*QGFCAGCSCPKAEG Trigger: ACCTTCTGCTTTCGGGCAGCTGCAGCCAGCACAGAAACCTTGCAAGCTCACTCTGTGTGTAGGCTTTCTGGACAAGGAATGGTCGCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR TCA 90 bp | CACATCCGAAAGGCAGAGCAGATAGCGGCCACTCCTGTCCCTATTCTCCCTAGACCCCAGGCTCCTTACTaGAACCCTCTTTTTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: HIRKAEQIAATPVPILPRPQAPY*NPLFLS Trigger: AGAGAGAAAAAGAGGGTTTCAGTAAGGAGCCTGGGG...TCTAGGGAGAATAGGGACAGGAGTGGCCGCTATCTGCTCTGCCTTTCGGATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR GCA 90 bp | CACACATGCAAACATGGGAGGAGCAGGCTTGAGAAATGTATACAGACCCCTTGGTGGCCAGAGGCAGGATaGTACCCCAGGCTCCTTACT | + |
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Preference number: 2 (lower is better) Translates to: HTCKHGRSRLEKCIQTPWWPEAG*YPRLLT Trigger: AGTAAGGAGCCTGGGGTAGCATCCTGCCTCTGGCCA...CCAAGGGGTCTGTATACATTTCTCAAGCCTGCTCCTCCCATGTTTGCATGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR CCA 90 bp | CACATCCGAAAGGCAGAGCAGATAGCGGCCACTCCTGTCCCTATTCTCCCTAGATACGGGAGACGGAAATaGAGAGCATCCTGTTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: HIRKAEQIAATPVPILPRYGRRK*RASCWR Trigger: TCTCCAACAGGATGCTCTCCATTTCCGTCTCCCGTA...TCTAGGGAGAATAGGGACAGGAGTGGCCGCTATCTGCTCTGCCTTTCGGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR TCA 90 bp | AACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAAAGGGGGAGGTCAGGAGGCACTaGGCAAGATGGGTCCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: NTAQPNFCSVVLAKKKKGEVRRH*ARWVQS Trigger: GGACTGGACCCATCTTGCTCAGTGCCTCCTGACCTC...CCCCTTTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTTTTTCTCTCTCTCAAGTGGGCACTAAACCCATGTCCTCGTTGCTCCCATACGGGAGACGGAAATaGAGAGCATCCTGTTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PSFSLSQVGTKPMSSLLPYGRRK*RASCWR Trigger: TCTCCAACAGGATGCTCTCCATTTCCGTCTCCCGTA...TGGGAGCAACGAGGACATGGGTTTAGTGCCCACTTGAGAGAGAGAAAAAGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR CCA 90 bp | TCAGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGGGTAATCGCTCTTTTTaGTTTTTGGAGACAGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SDAHTYPKGGRQDGVTVRGNRSF*FLETGS Trigger: AGAACCTGTCTCCAAAAACCAAAAAGAGCGATTACC...CCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR TCA 90 bp | GTAAACCAGAGGTATAATTATTTCCCTTCCCCCAAAGGGCAGTTGCTCCACTGGCCCCAGGCTCCTTACTaGAACCCTCTTTTTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: VNQRYNYFPSPKGQLLHWPQAPY*NPLFLS Trigger: AGAGAGAAAAAGAGGGTTTCAGTAAGGAGCCTGGGG...CCAGTGGAGCAACTGCCCTTTGGGGGAAGGGAAATAATTATACCTCTGGTTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGCAAGGTTTCTGTGCTGGCTGCAGCTGCCCGAAAGCAGAAGGTAGGATCGGTAATCGCTCTTTTTaGTTTTTGGAGACAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SLQGFCAGCSCPKAEGRIGNRSF*FLETGS Trigger: AGAACCTGTCTCCAAAAACCAAAAAGAGCGATTACC...GATCCTACCTTCTGCTTTCGGGCAGCTGCAGCCAGCACAGAAACCTTGCAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR TCA 90 bp | GTAAACCAGAGGTATAATTATTTCCCTTCCCCCAAAGGGCAGTTGCTCCACTGGACATTAATACTTTGGTaGAGTTTGGCCAGAGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VNQRYNYFPSPKGQLLHWTLILW*SLARGR Trigger: CCTGCCTCTGGCCAAACTTCACCAAAGTATTAATGT...CCAGTGGAGCAACTGCCCTTTGGGGGAAGGGAAATAATTATACCTCTGGTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR CCA 90 bp | ATGATAGTCAAAGGCACAAAGTTTAAGGGGAAGCAGAGGGAGTGGGATATGTTATACGGGAGACGGAAATaGAGAGCATCCTGTTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: MIVKGTKFKGKQREWDMLYGRRK*RASCWR Trigger: TCTCCAACAGGATGCTCTCCATTTCCGTCTCCCGTA...TAACATATCCCACTCCCTCTGCTTCCCCTTAAACTTTGTGCCTTTGACTATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR TCA 90 bp | AACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAAAGGGGACATTAATACTTTGGTaGAGTTTGGCCAGAGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: NTAQPNFCSVVLAKKKKGTLILW*SLARGR Trigger: CCTGCCTCTGGCCAAACTTCACCAAAGTATTAATGT...CCCCTTTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR CAA 90 bp | AGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGGCCTTGGAGGAAAGGCATaGAGGTCAGGAGGCACTGAG | + |
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Preference number: 3 (lower is better) Translates to: RRTHLSQRREAGWGYSEGLGGKA*RSGGTE Trigger: CTCAGTGCCTCCTGACCTCAATGCCTTTCCTCCAAG...GCCCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR TCA 72 bp | CCTGTCCCTATTCTCCCTAGACACAGGAAGGGGTGCTaGATAGGACAGGGCTCCAGAAGCCAAGGTGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: PVPILPRHRKGC*IGQGSRSQGGS Trigger: ACTGCCACCTTGGCTTCTGGAGCCCTGTCCTATTCAGCACCCCTTCCTGTGTCTAGGGAGAATAGGGACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR TCA 72 bp | GCGACCATTCCTTGTCCAGAAAGCCTACACACAGAGTaGGCTTGCAAGGTTTCTGTGCTGGCTGCAGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: ATIPCPESLHTE*ACKVSVLAAAA Trigger: GGCAGCTGCAGCCAGCACAGAAACCTTGCAAGCTCACTCTGTGTGTAGGCTTTCTGGACAAGGAATGGTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR GCA 72 bp | CTCTCTCTCAAGTGGGCACTAAACCCATGTCCTCGTTaGTCCCAGTTCCCACCCAAGGCCAGACCCACAAAA | + |
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Preference number: 3 (lower is better) Translates to: LSLKWALNPCPR*SQFPPKARPTK Trigger: TTTTGTGGGTCTGGCCTTGGGTGGGAACTGGGAGCAACGAGGACATGGGTTTAGTGCCCACTTGAGAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR CCA 72 bp | GCTGTGATTAAAGGCGTGCGCCACCATATTCAGGCTTaGGGCAATCTCTTAAGGGCTGCACATCCGAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: AVIKGVRHHIQA*GNLLRAAHPKG Trigger: GCCTTTCGGATGTGCAGCCCTTAAGAGATTGCCCCAAGCCTGAATATGGTGGCGCACGCCTTTAATCACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR CAA 90 bp | AACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAAAGGGGCCACCATATTCAGGCTaGGGGCAATCTCTTAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: NTAQPNFCSVVLAKKKKGPPYSG*GQSLKG Trigger: GCCCTTAAGAGATTGCCCCAAGCCTGAATATGGTGG...CCCCTTTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR CCA 72 bp | AATTATTTCCCTTCCCCCAAAGGGCAGTTGCTCCACTaGGCCTATCATCACAGGGCATTTTCCATTATAAGA | + |
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Preference number: 3 (lower is better) Translates to: NYFPSPKGQLLH*AYHHRAFSIIR Trigger: TCTTATAATGGAAAATGCCCTGTGATGATAGGCCCAGTGGAGCAACTGCCCTTTGGGGGAAGGGAAATAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR-3UTR CAA 90 bp | CCCACAACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAAAGTGAGGGCTATACTTaGGCTGTAGACTATAACACA | + |
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Preference number: 3 (lower is better) Translates to: PTTLLSQISAQLSWRKRKSEGYT*AVDYNT Trigger: TGTGTTATAGTCTACAGCCAAAGTATAGCCCTCACT...TTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTTGTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| 3UTR CCA 72 bp | ATTTCCCTTTGGTATAAGACATCCAAACCAAAAATTTaGCGACCATTCCTTGTCCAGAAAGCCTACACACAG | + |
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Preference number: 3 (lower is better) Translates to: ISLWYKTSKPKI*RPFLVQKAYTQ Trigger: CTGTGTGTAGGCTTTCTGGACAAGGAATGGTCGCCAAATTTTTGGTTTGGATGTCTTATACCAAAGGGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| CDS-3UTR GCA 90 bp | ACACCCTGGAGGCCCAAGTCAGACGCACACACCTATCCCAAAGGAGGGAGGCAGCTTCTACCCGAGTCCTaGGCCCGCCGCCTCCACTCA | + |
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Preference number: 4 (lower is better) Translates to: TPWRPKSDAHTYPKGGRQLLPES*ARRLHS Trigger: TGAGTGGAGGCGGCGGGCGCAGGACTCGGGTAGAAG...CTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCTGACTTGGGCCTCCAGGGTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039110.12 ENSMUST00000191485.7 |
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| CDS-3UTR CCA 90 bp | CAGGGCTCCAGAAGCCAAGGTGGCAGTAACCCCTGTCCACACGTGAAGGGCCTGGCTCAGCCATGGACATaGACTGCGGTGGGGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QGSRSQGGSNPCPHVKGLAQPWT*TAVGVA Trigger: TGCCACCCCCACCGCAGTCCATGTCCATGGCTGAGC...CAGGCCCTTCACGTGTGGACAGGGGTTACTGCCACCTTGGCTTCTGGAGCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| CDS-3UTR TCA 90 bp | AGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGGCTCCCCAGGATGGAGCTaGGTGGGCGGCTACAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RRTHLSQRREAGWGYSEGSPGWS*VGGYKA Trigger: AGCCTTGTAGCCGCCCACTCAGCTCCATCCTGGGGA...GCCCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| CDS-3UTR CCA 90 bp | AGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGGCGCAGCTGCTCAGCCATaGACATGGACTGCGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RRTHLSQRREAGWGYSEGAAAQP*TWTAVG Trigger: CCCCACCGCAGTCCATGTCCATGGCTGAGCAGCTGC...GCCCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| CDS-3UTR TCA 90 bp | CAGGGCTCCAGAAGCCAAGGTGGCAGTAACCCCTGTCCACACGTGAAGGGCCTGCTCGTGTGGGCTTATTaGCAAAGCTCCCGTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QGSRSQGGSNPCPHVKGLLVWAY*QSSRVW Trigger: CCAGACACGGGAGCTTTGTCAATAAGCCCACACGAG...CAGGCCCTTCACGTGTGGACAGGGGTTACTGCCACCTTGGCTTCTGGAGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000191485.7 |
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| CDS-3UTR TCA 90 bp | CTGCACATCCGAAAGGCAGAGCAGATAGCGGCCACTCCTGTCCCTATTCTCCCTTCCCCAGGATGGAGCTaGGTGGGCGGCTACAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LHIRKAEQIAATPVPILPSPGWS*VGGYKA Trigger: AGCCTTGTAGCCGCCCACTCAGCTCCATCCTGGGGA...AGGGAGAATAGGGACAGGAGTGGCCGCTATCTGCTCTGCCTTTCGGATGTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| CDS-3UTR TCA 90 bp | AGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGGCCCAAGAAGTCACCATTaGGCTGCAGCAGCGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: RRTHLSQRREAGWGYSEGPRSHH*AAAAPR Trigger: CCGAGGCGCTGCTGCAGCTCAATGGTGACTTCTTGG...GCCCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| CDS-3UTR GCA 90 bp | AAAACCCACACTGACTGTACACACCCTGGAGGCCCAAGTCAGACGCACACACCTGCCCCACCCCCAGCCTaGCGGGCCTTGTCTAGATTC | + |
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Preference number: 4 (lower is better) Translates to: KTHTDCTHPGGPSQTHTPAPPPA*RALSRF Trigger: GAATCTAGACAAGGCCCGGCAGGCTGGGGGTGGGGC...AGGTGTGTGCGTCTGACTTGGGCCTCCAGGGTGTGTACAGTCAGTGTGGGTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| CDS-3UTR GCA 90 bp | CACATCCGAAAGGCAGAGCAGATAGCGGCCACTCCTGTCCCTATTCTCCCTAGAGCCCCACCCCCAGCCTaGCGGGCCTTGTCTAGATTC | + |
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Preference number: 4 (lower is better) Translates to: HIRKAEQIAATPVPILPRAPPPA*RALSRF Trigger: GAATCTAGACAAGGCCCGGCAGGCTGGGGGTGGGGC...TCTAGGGAGAATAGGGACAGGAGTGGCCGCTATCTGCTCTGCCTTTCGGATGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| CDS-3UTR GCA 90 bp | AGCTTGCAAGGTTTCTGTGCTGGCTGCAGCTGCCCGAAAGCAGAAGGTAGGATCGCCATGGACATGGACTaGGGTGGGGGTGGCACCCGA | + |
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Preference number: 4 (lower is better) Translates to: SLQGFCAGCSCPKAEGRIAMDMD*GGGGTR Trigger: TCGGGTGCCACCCCCACCGCAGTCCATGTCCATGGC...GATCCTACCTTCTGCTTTCGGGCAGCTGCAGCCAGCACAGAAACCTTGCAAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| CDS-3UTR GCA 90 bp | AGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGGCAGCAAGTGCTTGGGCTaGCCACTCTGCAGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RRTHLSQRREAGWGYSEGSKCLG*PLCRPV Trigger: CACTGGCCTGCAGAGTGGGCAGCCCAAGCACTTGCT...GCCCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| CDS-3UTR GCA 90 bp | AAGTGGGCACTAAACCCATGTCCTCGTTGCTCCCAGTTCCCACCCAAGGCCAGACCGAAGGGCTGCCCCTaGACTCCCTTCCCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KWALNPCPRCSQFPPKARPKGCP*TPFPIF Trigger: GAAGATGGGGAAGGGAGTGCAGGGGCAGCCCTTCGG...TCTGGCCTTGGGTGGGAACTGGGAGCAACGAGGACATGGGTTTAGTGCCCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094378.10 |
||
| CDS-3UTR CCA 90 bp | CAGGGCTCCAGAAGCCAAGGTGGCAGTAACCCCTGTCCACACGTGAAGGGCCTGAAGTGGCTGGACATCTaGGCACTAGGCAGAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGSRSQGGSNPCPHVKGLKWLDI*ALGRVG Trigger: ACCCACTCTGCCTAGTGCCCAGATGTCCAGCCACTT...CAGGCCCTTCACGTGTGGACAGGGGTTACTGCCACCTTGGCTTCTGGAGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCAAGGTTTCTGTGCTGGCTGCAGCTGCCCGAAAGCAGAAGGTAGGATCTCCCCAGGATGGAGCTaGGTGGGCGGCTACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQGFCAGCSCPKAEGRISPGWS*VGGYKA Trigger: AGCCTTGTAGCCGCCCACTCAGCTCCATCCTGGGGA...GATCCTACCTTCTGCTTTCGGGCAGCTGCAGCCAGCACAGAAACCTTGCAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR TCA 90 bp | CTGCACATCCGAAAGGCAGAGCAGATAGCGGCCACTCCTGTCCCTATTCTCCCTCCAAGAAGTCACCATTaGGCTGCAGCAGCGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LHIRKAEQIAATPVPILPPRSHH*AAAAPR Trigger: CCGAGGCGCTGCTGCAGCTCAATGGTGACTTCTTGG...AGGGAGAATAGGGACAGGAGTGGCCGCTATCTGCTCTGCCTTTCGGATGTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR TCA 90 bp | TCAGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGCCAAGAAGTCACCATTaGGCTGCAGCAGCGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SDAHTYPKGGRQDGVTVRPRSHH*AAAAPR Trigger: CCGAGGCGCTGCTGCAGCTCAATGGTGACTTCTTGG...CCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR TCA 90 bp | AGGTCCCACAAGTTAGAGAATACGGGAGACGGAAATGGAGAGCATCCTGTTGGAGAGGGGCAAGAGGCCTaGGTCCCGAAGGGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSHKLENTGDGNGEHPVGEGQEA*VPKGCP Trigger: GGGGCAGCCCTTCGGGACTCAGGCCTCTTGCCCCTC...TCCAACAGGATGCTCTCCATTTCCGTCTCCCGTATTCTCTAACTTGTGGGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094378.10 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTCCAGAAGCCAAGGTGGCAGTAACCCCTGTCCACACGTGAAGGGCCTGGGGTGGCACCCGAAGTaGATCTTCAAAGGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGSRSQGGSNPCPHVKGLGWHPK*IFKGLH Trigger: ATGAAGCCCTTTGAAGATGCACTTCGGGTGCCACCC...CAGGCCCTTCACGTGTGGACAGGGGTTACTGCCACCTTGGCTTCTGGAGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AAGTGGGCACTAAACCCATGTCCTCGTTGCTCCCAGTTCCCACCCAAGGCCAGAAGCAAGTGCTTGGGCTaGCCACTCTGCAGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KWALNPCPRCSQFPPKARSKCLG*PLCRPV Trigger: CACTGGCCTGCAGAGTGGGCAGCCCAAGCACTTGCT...TCTGGCCTTGGGTGGGAACTGGGAGCAACGAGGACATGGGTTTAGTGCCCACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | AAGTGGGCACTAAACCCATGTCCTCGTTGCTCCCAGTTCCCACCCAAGGCCAGAGAAGAGTTCTCTGCCTaGGCAAGGCGGCGGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KWALNPCPRCSQFPPKAREEFSA*ARRRRQ Trigger: TTGCCTCCGCCGCCTTGCCCAGGCAGAGAACTCTTC...TCTGGCCTTGGGTGGGAACTGGGAGCAACGAGGACATGGGTTTAGTGCCCACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | TCAGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGGAAGAGTTCTCTGCCTaGGCAAGGCGGCGGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDAHTYPKGGRQDGVTVREEFSA*ARRRRQ Trigger: TTGCCTCCGCCGCCTTGCCCAGGCAGAGAACTCTTC...CCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCAAGGTTTCTGTGCTGGCTGCAGCTGCCCGAAAGCAGAAGGTAGGATCCCAAGAAGTCACCATTaGGCTGCAGCAGCGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQGFCAGCSCPKAEGRIPRSHH*AAAAPR Trigger: CCGAGGCGCTGCTGCAGCTCAATGGTGACTTCTTGG...GATCCTACCTTCTGCTTTCGGGCAGCTGCAGCCAGCACAGAAACCTTGCAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AAGTGGGCACTAAACCCATGTCCTCGTTGCTCCCAGTTCCCACCCAAGGCCAGAACTTTGTCGTTGGGATaGAGCCAGCCTCGTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KWALNPCPRCSQFPPKARTLSLG*SQPRVG Trigger: GCCCACACGAGGCTGGCTGCATCCCAACGACAAAGT...TCTGGCCTTGGGTGGGAACTGGGAGCAACGAGGACATGGGTTTAGTGCCCACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AGCTTGCAAGGTTTCTGTGCTGGCTGCAGCTGCCCGAAAGCAGAAGGTAGGATCAGCAAGTGCTTGGGCTaGCCACTCTGCAGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLQGFCAGCSCPKAEGRISKCLG*PLCRPV Trigger: CACTGGCCTGCAGAGTGGGCAGCCCAAGCACTTGCT...GATCCTACCTTCTGCTTTCGGGCAGCTGCAGCCAGCACAGAAACCTTGCAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | TCAGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGATTAAGAGAAGGATTTaGGGGCCCAGCCCCACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SDAHTYPKGGRQDGVTVRIKRRI*GPSPTP Trigger: GGGGGTGGGGCTGGGCCCCCAAATCCTTCTCTTAAT...CCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AGGTCCCACAAGTTAGAGAATACGGGAGACGGAAATGGAGAGCATCCTGTTGGAGCCCCACCCCCAGCCTaGCGGGCCTTGTCTAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RSHKLENTGDGNGEHPVGAPPPA*RALSRF Trigger: GAATCTAGACAAGGCCCGGCAGGCTGGGGGTGGGGC...TCCAACAGGATGCTCTCCATTTCCGTCTCCCGTATTCTCTAACTTGTGGGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | CTGCACATCCGAAAGGCAGAGCAGATAGCGGCCACTCCTGTCCCTATTCTCCCTTTCCGATCCACGGGTTaGTGTAGGCACAGTTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHIRKAEQIAATPVPILPFRSTG*CRHSSL Trigger: CAGCGAACTGTGCCTACAGCAACCCGTGGATCGGAA...AGGGAGAATAGGGACAGGAGTGGCCGCTATCTGCTCTGCCTTTCGGATGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | AAGTGGGCACTAAACCCATGTCCTCGTTGCTCCCAGTTCCCACCCAAGGCCAGAAAGTGGCTGGACATCTaGGCACTAGGCAGAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KWALNPCPRCSQFPPKARKWLDI*ALGRVG Trigger: ACCCACTCTGCCTAGTGCCCAGATGTCCAGCCACTT...TCTGGCCTTGGGTGGGAACTGGGAGCAACGAGGACATGGGTTTAGTGCCCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | TCAGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGAAGTGGCTGGACATCTaGGCACTAGGCAGAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDAHTYPKGGRQDGVTVRKWLDI*ALGRVG Trigger: ACCCACTCTGCCTAGTGCCCAGATGTCCAGCCACTT...CCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR TCA 90 bp | CACATCCGAAAGGCAGAGCAGATAGCGGCCACTCCTGTCCCTATTCTCCCTAGACTCGTGTGGGCTTATTaGCAAAGCTCCCGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HIRKAEQIAATPVPILPRLVWAY*QSSRVW Trigger: CCAGACACGGGAGCTTTGTCAATAAGCCCACACGAG...TCTAGGGAGAATAGGGACAGGAGTGGCCGCTATCTGCTCTGCCTTTCGGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000191485.7 |
||
| CDS-3UTR TCA 90 bp | AAAACCCACACTGACTGTACACACCCTGGAGGCCCAAGTCAGACGCACACACCTCCTGAGTCCGGGTATTaGAGTCAAGGGCTCGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KTHTDCTHPGGPSQTHTPPESGY*SQGLAL Trigger: CAATGCGAGCCCTTGACTTCAATACCCGGACTCAGG...AGGTGTGTGCGTCTGACTTGGGCCTCCAGGGTGTGTACAGTCAGTGTGGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | GTAAACCAGAGGTATAATTATTTCCCTTCCCCCAAAGGGCAGTTGCTCCACTGGCTTCTACCCGAGTCCTaGGCCCGCCGCCTCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VNQRYNYFPSPKGQLLHWLLPES*ARRLHS Trigger: TGAGTGGAGGCGGCGGGCGCAGGACTCGGGTAGAAG...CCAGTGGAGCAACTGCCCTTTGGGGGAAGGGAAATAATTATACCTCTGGTTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AAACCCTCTTTTTCTCTCTCTCAAGTGGGCACTAAACCCATGTCCTCGTTGCTCCTTCTACCCGAGTCCTaGGCCCGCCGCCTCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: KPSFSLSQVGTKPMSSLLLLPES*ARRLHS Trigger: TGAGTGGAGGCGGCGGGCGCAGGACTCGGGTAGAAG...GAGCAACGAGGACATGGGTTTAGTGCCCACTTGAGAGAGAGAAAAAGAGGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | CTGCACATCCGAAAGGCAGAGCAGATAGCGGCCACTCCTGTCCCTATTCTCCCTGACTTCATGGTCTCCTaGAGCATGCTGCCCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHIRKAEQIAATPVPILPDFMVS*SMLPYR Trigger: CCTATAGGGCAGCATGCTGCAGGAGACCATGAAGTC...AGGGAGAATAGGGACAGGAGTGGCCGCTATCTGCTCTGCCTTTCGGATGTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AAACCCTCTTTTTCTCTCTCTCAAGTGGGCACTAAACCCATGTCCTCGTTGCTCGCCCCACCCCCAGCCTaGCGGGCCTTGTCTAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: KPSFSLSQVGTKPMSSLLAPPPA*RALSRF Trigger: GAATCTAGACAAGGCCCGGCAGGCTGGGGGTGGGGC...GAGCAACGAGGACATGGGTTTAGTGCCCACTTGAGAGAGAGAAAAAGAGGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AAACAGAGGTCCCACAAGTTAGAGAATACGGGAGACGGAAATGGAGAGCATCCTGCCATGGACATGGACTaGGGTGGGGGTGGCACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KQRSHKLENTGDGNGEHPAMDMD*GGGGTR Trigger: TCGGGTGCCACCCCCACCGCAGTCCATGTCCATGGC...AGGATGCTCTCCATTTCCGTCTCCCGTATTCTCTAACTTGTGGGACCTCTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AAAACCCACACTGACTGTACACACCCTGGAGGCCCAAGTCAGACGCACACACCTTTCCGATCCACGGGTTaGTGTAGGCACAGTTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTHTDCTHPGGPSQTHTPFRSTG*CRHSSL Trigger: CAGCGAACTGTGCCTACAGCAACCCGTGGATCGGAA...AGGTGTGTGCGTCTGACTTGGGCCTCCAGGGTGTGTACAGTCAGTGTGGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | CACATCCGAAAGGCAGAGCAGATAGCGGCCACTCCTGTCCCTATTCTCCCTAGATTCCGATCCACGGGTTaGTGTAGGCACAGTTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HIRKAEQIAATPVPILPRFRSTG*CRHSSL Trigger: CAGCGAACTGTGCCTACAGCAACCCGTGGATCGGAA...TCTAGGGAGAATAGGGACAGGAGTGGCCGCTATCTGCTCTGCCTTTCGGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | ACACCCTGGAGGCCCAAGTCAGACGCACACACCTATCCCAAAGGAGGGAGGCAGGGTGACCAGCTTCGGTaGATTCCTGAGATACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPWRPKSDAHTYPKGGRQGDQLR*IPEILF Trigger: AAACAGTATCTCAGGAATCCACCGAAGCTGGTCACC...CTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCTGACTTGGGCCTCCAGGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | GCAAACATGGGAGGAGCAGGCTTGAGAAATGTATACAGACCCCTTGGAGGAAAGGCTCAGCCATGGACATaGACTGCGGTGGGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ANMGGAGLRNVYRPLGGKAQPWT*TAVGVA Trigger: TGCCACCCCCACCGCAGTCCATGTCCATGGCTGAGC...CTTTCCTCCAAGGGGTCTGTATACATTTCTCAAGCCTGCTCCTCCCATGTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | AGGTCCCACAAGTTAGAGAATACGGGAGACGGAAATGGAGAGCATCCTGTTGGAGCAGCTGCTCAGCCATaGACATGGACTGCGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSHKLENTGDGNGEHPVGAAAQP*TWTAVG Trigger: CCCCACCGCAGTCCATGTCCATGGCTGAGCAGCTGC...TCCAACAGGATGCTCTCCATTTCCGTCTCCCGTATTCTCTAACTTGTGGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| 3UTR CAA 72 bp | TCTCTCTCTCAAGTGGGCACTAAACCCATGTCCTCGTaGCTCCCAGTTCCCACCCAAGGCCAGACCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSQVGTKPMSS*LPVPTQGQTHK Trigger: TTTGTGGGTCTGGCCTTGGGTGGGAACTGGGAGCAACGAGGACATGGGTTTAGTGCCCACTTGAGAGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AAAACCCACACTGACTGTACACACCCTGGAGGCCCAAGTCAGACGCACACACCTTGGTCTCCTGCAGCATaGTGCCCTATAGGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KTHTDCTHPGGPSQTHTPWSPAA*CPIGSV Trigger: TACACTGCCTATAGGGCAGCATGCTGCAGGAGACCA...AGGTGTGTGCGTCTGACTTGGGCCTCCAGGGTGTGTACAGTCAGTGTGGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AGCTTGCAAGGTTTCTGTGCTGGCTGCAGCTGCCCGAAAGCAGAAGGTAGGATCGGGTGGCACCCGAAGTaGATCTTCAAAGGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLQGFCAGCSCPKAEGRIGWHPK*IFKGLH Trigger: ATGAAGCCCTTTGAAGATGCACTTCGGGTGCCACCC...GATCCTACCTTCTGCTTTCGGGCAGCTGCAGCCAGCACAGAAACCTTGCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | AGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGGCGGTGACCAGCTTCGGTaGATTCCTGAGATACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRTHLSQRREAGWGYSEGGDQLR*IPEILF Trigger: AAACAGTATCTCAGGAATCCACCGAAGCTGGTCACC...GCCCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | CACACATGCAAACATGGGAGGAGCAGGCTTGAGAAATGTATACAGACCCCTTGGGAAGAGTTCTCTGCCTaGGCAAGGCGGCGGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTCKHGRSRLEKCIQTPWEEFSA*ARRRRQ Trigger: TTGCCTCCGCCGCCTTGCCCAGGCAGAGAACTCTTC...CCAAGGGGTCTGTATACATTTCTCAAGCCTGCTCCTCCCATGTTTGCATGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | AGGTCCCACAAGTTAGAGAATACGGGAGACGGAAATGGAGAGCATCCTGTTGGAGAAGAGTTCTCTGCCTaGGCAAGGCGGCGGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSHKLENTGDGNGEHPVGEEFSA*ARRRRQ Trigger: TTGCCTCCGCCGCCTTGCCCAGGCAGAGAACTCTTC...TCCAACAGGATGCTCTCCATTTCCGTCTCCCGTATTCTCTAACTTGTGGGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | AAACAGAGGTCCCACAAGTTAGAGAATACGGGAGACGGAAATGGAGAGCATCCTGCTCAGCCATGGACATaGACTGCGGTGGGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQRSHKLENTGDGNGEHPAQPWT*TAVGVA Trigger: TGCCACCCCCACCGCAGTCCATGTCCATGGCTGAGC...AGGATGCTCTCCATTTCCGTCTCCCGTATTCTCTAACTTGTGGGACCTCTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | GTAAACCAGAGGTATAATTATTTCCCTTCCCCCAAAGGGCAGTTGCTCCACTGGGCAGCTGCTCAGCCATaGACATGGACTGCGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VNQRYNYFPSPKGQLLHWAAAQP*TWTAVG Trigger: CCCCACCGCAGTCCATGTCCATGGCTGAGCAGCTGC...CCAGTGGAGCAACTGCCCTTTGGGGGAAGGGAAATAATTATACCTCTGGTTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | CCCACAACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAAGCCATGGACATGGACTaGGGTGGGGGTGGCACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PTTLLSQISAQLSWRKRKAMDMD*GGGGTR Trigger: TCGGGTGCCACCCCCACCGCAGTCCATGTCCATGGC...TTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTTGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | GTAAACCAGAGGTATAATTATTTCCCTTCCCCCAAAGGGCAGTTGCTCCACTGGAGCAAGTGCTTGGGCTaGCCACTCTGCAGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VNQRYNYFPSPKGQLLHWSKCLG*PLCRPV Trigger: CACTGGCCTGCAGAGTGGGCAGCCCAAGCACTTGCT...CCAGTGGAGCAACTGCCCTTTGGGGGAAGGGAAATAATTATACCTCTGGTTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | AGGTCCCACAAGTTAGAGAATACGGGAGACGGAAATGGAGAGCATCCTGTTGGATTCAGCAGCCTTTCCTaGCTCCCCTTTAGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSHKLENTGDGNGEHPVGFSSLS*LPFRPQ Trigger: CTGGGGCCTAAAGGGGAGCCAGGAAAGGCTGCTGAA...TCCAACAGGATGCTCTCCATTTCCGTCTCCCGTATTCTCTAACTTGTGGGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094378.10 |
||
| CDS-3UTR TCA 90 bp | CCCACAACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAATCCCCAGGATGGAGCTaGGTGGGCGGCTACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTTLLSQISAQLSWRKRKSPGWS*VGGYKA Trigger: AGCCTTGTAGCCGCCCACTCAGCTCCATCCTGGGGA...TTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTTGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | CCCTCTTTTTCTCTCTCTCAAGTGGGCACTAAACCCATGTCCTCGTTGCTCCCATGGTCTCCTGCAGCATaGTGCCCTATAGGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSFSLSQVGTKPMSSLLPWSPAA*CPIGSV Trigger: TACACTGCCTATAGGGCAGCATGCTGCAGGAGACCA...TGGGAGCAACGAGGACATGGGTTTAGTGCCCACTTGAGAGAGAGAAAAAGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | CCCTCTTTTTCTCTCTCTCAAGTGGGCACTAAACCCATGTCCTCGTTGCTCCCAGGGTGGCACCCGAAGTaGATCTTCAAAGGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSFSLSQVGTKPMSSLLPGWHPK*IFKGLH Trigger: ATGAAGCCCTTTGAAGATGCACTTCGGGTGCCACCC...TGGGAGCAACGAGGACATGGGTTTAGTGCCCACTTGAGAGAGAGAAAAAGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | CACACATGCAAACATGGGAGGAGCAGGCTTGAGAAATGTATACAGACCCCTTGGTTCCGATCCACGGGTTaGTGTAGGCACAGTTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTCKHGRSRLEKCIQTPWFRSTG*CRHSSL Trigger: CAGCGAACTGTGCCTACAGCAACCCGTGGATCGGAA...CCAAGGGGTCTGTATACATTTCTCAAGCCTGCTCCTCCCATGTTTGCATGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | CACATCCGAAAGGCAGAGCAGATAGCGGCCACTCCTGTCCCTATTCTCCCTAGAAGGGGGTTCCTTCCCTaGAAAGTCATTGTAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: HIRKAEQIAATPVPILPRRGFLP*KVIVVL Trigger: CAGTACTACAATGACTTTCCAGGGAAGGAACCCCCT...TCTAGGGAGAATAGGGACAGGAGTGGCCGCTATCTGCTCTGCCTTTCGGATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | CCCACAACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAAGCAGCTGCTCAGCCATaGACATGGACTGCGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTTLLSQISAQLSWRKRKAAAQP*TWTAVG Trigger: CCCCACCGCAGTCCATGTCCATGGCTGAGCAGCTGC...TTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTTGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR TCA 90 bp | AAACAGAGGTCCCACAAGTTAGAGAATACGGGAGACGGAAATGGAGAGCATCCTCCTGAGTCCGGGTATTaGAGTCAAGGGCTCGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KQRSHKLENTGDGNGEHPPESGY*SQGLAL Trigger: CAATGCGAGCCCTTGACTTCAATACCCGGACTCAGG...AGGATGCTCTCCATTTCCGTCTCCCGTATTCTCTAACTTGTGGGACCTCTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AGGTCCCACAAGTTAGAGAATACGGGAGACGGAAATGGAGAGCATCCTGTTGGATGGTCTCCTGCAGCATaGTGCCCTATAGGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RSHKLENTGDGNGEHPVGWSPAA*CPIGSV Trigger: TACACTGCCTATAGGGCAGCATGCTGCAGGAGACCA...TCCAACAGGATGCTCTCCATTTCCGTCTCCCGTATTCTCTAACTTGTGGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | CACACATGCAAACATGGGAGGAGCAGGCTTGAGAAATGTATACAGACCCCTTGGGACTTCATGGTCTCCTaGAGCATGCTGCCCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTCKHGRSRLEKCIQTPWDFMVS*SMLPYR Trigger: CCTATAGGGCAGCATGCTGCAGGAGACCATGAAGTC...CCAAGGGGTCTGTATACATTTCTCAAGCCTGCTCCTCCCATGTTTGCATGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | ATGATAGTCAAAGGCACAAAGTTTAAGGGGAAGCAGAGGGAGTGGGATATGTTAGCTCAGCCATGGACATaGACTGCGGTGGGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MIVKGTKFKGKQREWDMLAQPWT*TAVGVA Trigger: TGCCACCCCCACCGCAGTCCATGTCCATGGCTGAGC...TAACATATCCCACTCCCTCTGCTTCCCCTTAAACTTTGTGCCTTTGACTATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | CCCACAACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAAACTTTGTCGTTGGGATaGAGCCAGCCTCGTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTTLLSQISAQLSWRKRKTLSLG*SQPRVG Trigger: GCCCACACGAGGCTGGCTGCATCCCAACGACAAAGT...TTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTTGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039110.12 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AAACCCTCTTTTTCTCTCTCTCAAGTGGGCACTAAACCCATGTCCTCGTTGCTCGACTTCATGGTCTCCTaGAGCATGCTGCCCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPSFSLSQVGTKPMSSLLDFMVS*SMLPYR Trigger: CCTATAGGGCAGCATGCTGCAGGAGACCATGAAGTC...GAGCAACGAGGACATGGGTTTAGTGCCCACTTGAGAGAGAGAAAAAGAGGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | GTAAACCAGAGGTATAATTATTTCCCTTCCCCCAAAGGGCAGTTGCTCCACTGGGACTTCATGGTCTCCTaGAGCATGCTGCCCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNQRYNYFPSPKGQLLHWDFMVS*SMLPYR Trigger: CCTATAGGGCAGCATGCTGCAGGAGACCATGAAGTC...CCAGTGGAGCAACTGCCCTTTGGGGGAAGGGAAATAATTATACCTCTGGTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | AACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAAAGGGGATTAAGAGAAGGATTTaGGGGCCCAGCCCCACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTAQPNFCSVVLAKKKKGIKRRI*GPSPTP Trigger: GGGGGTGGGGCTGGGCCCCCAAATCCTTCTCTTAAT...CCCCTTTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | AGGTCCCACAAGTTAGAGAATACGGGAGACGGAAATGGAGAGCATCCTGTTGGAAGACTCATTCCGAAGTaGGTTGTACTTCGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSHKLENTGDGNGEHPVGRLIPK*VVLRLG Trigger: CCCAAGCCGAAGTACAACCCACTTCGGAATGAGTCT...TCCAACAGGATGCTCTCCATTTCCGTCTCCCGTATTCTCTAACTTGTGGGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094378.10 |
||
| CDS-3UTR TCA 90 bp | AACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAAAGGGGCTCGTGTGGGCTTATTaGCAAAGCTCCCGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTAQPNFCSVVLAKKKKGLVWAY*QSSRVW Trigger: CCAGACACGGGAGCTTTGTCAATAAGCCCACACGAG...CCCCTTTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039110.12 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | ATGATAGTCAAAGGCACAAAGTTTAAGGGGAAGCAGAGGGAGTGGGATATGTTAATTAAGAGAAGGATTTaGGGGCCCAGCCCCACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MIVKGTKFKGKQREWDMLIKRRI*GPSPTP Trigger: GGGGGTGGGGCTGGGCCCCCAAATCCTTCTCTTAAT...TAACATATCCCACTCCCTCTGCTTCCCCTTAAACTTTGTGCCTTTGACTATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR GCA 90 bp | AACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAAAGGGGTGGTCTCCTGCAGCATaGTGCCCTATAGGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTAQPNFCSVVLAKKKKGWSPAA*CPIGSV Trigger: TACACTGCCTATAGGGCAGCATGCTGCAGGAGACCA...CCCCTTTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | GTAAACCAGAGGTATAATTATTTCCCTTCCCCCAAAGGGCAGTTGCTCCACTGGAGGGGGTTCCTTCCCTaGAAAGTCATTGTAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: VNQRYNYFPSPKGQLLHWRGFLP*KVIVVL Trigger: CAGTACTACAATGACTTTCCAGGGAAGGAACCCCCT...CCAGTGGAGCAACTGCCCTTTGGGGGAAGGGAAATAATTATACCTCTGGTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CCA 90 bp | ATGATAGTCAAAGGCACAAAGTTTAAGGGGAAGCAGAGGGAGTGGGATATGTTAGGTGACCAGCTTCGGTaGATTCCTGAGATACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MIVKGTKFKGKQREWDMLGDQLR*IPEILF Trigger: AAACAGTATCTCAGGAATCCACCGAAGCTGGTCACC...TAACATATCCCACTCCCTCTGCTTCCCCTTAAACTTTGTGCCTTTGACTATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | AGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGGCCTCCTTGTCGCCCCTTaGGCACCAGGCACAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRTHLSQRREAGWGYSEGLLVAP*APGTAS Trigger: TGAAGCTGTGCCTGGTGCCAAAGGGGCGACAAGGAG...GCCCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | TCAGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGCTCCTTGTCGCCCCTTaGGCACCAGGCACAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SDAHTYPKGGRQDGVTVRLLVAP*APGTAS Trigger: TGAAGCTGTGCCTGGTGCCAAAGGGGCGACAAGGAG...CCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | CTGCACATCCGAAAGGCAGAGCAGATAGCGGCCACTCCTGTCCCTATTCTCCCTCTCCTTGTCGCCCCTTaGGCACCAGGCACAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LHIRKAEQIAATPVPILPLLVAP*APGTAS Trigger: TGAAGCTGTGCCTGGTGCCAAAGGGGCGACAAGGAG...AGGGAGAATAGGGACAGGAGTGGCCGCTATCTGCTCTGCCTTTCGGATGTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTCCAGAAGCCAAGGTGGCAGTAACCCCTGTCCACACGTGAAGGGCCTGTTGGCAATGATCTGTTaGCAGTCGGCTGCCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGSRSQGGSNPCPHVKGLLAMIC*QSAAMR Trigger: CCTCATGGCAGCCGACTGCAAACAGATCATTGCCAA...CAGGCCCTTCACGTGTGGACAGGGGTTACTGCCACCTTGGCTTCTGGAGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | AGCTTGCAAGGTTTCTGTGCTGGCTGCAGCTGCCCGAAAGCAGAAGGTAGGATCCCCATGACTTTGTCGTaGGGATGCAGCCAGCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SLQGFCAGCSCPKAEGRIPMTLS*GCSQPR Trigger: ACGAGGCTGGCTGCATCCCAACGACAAAGTCATGGG...GATCCTACCTTCTGCTTTCGGGCAGCTGCAGCCAGCACAGAAACCTTGCAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039110.12 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | AAGTGGGCACTAAACCCATGTCCTCGTTGCTCCCAGTTCCCACCCAAGGCCAGATTGGCCAGCTTCAGGTaGCTCATCCGGGGAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KWALNPCPRCSQFPPKARLASFR*LIRGKK Trigger: CTTCTTTCCCCGGATGAGCAACCTGAAGCTGGCCAA...TCTGGCCTTGGGTGGGAACTGGGAGCAACGAGGACATGGGTTTAGTGCCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094378.10 |
||
| CDS-3UTR CAA 90 bp | AGCTTGCAAGGTTTCTGTGCTGGCTGCAGCTGCCCGAAAGCAGAAGGTAGGATCCCTCGTGTGGGCTTATaGACAAAGCTCCCGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLQGFCAGCSCPKAEGRIPRVGL*TKLPCL Trigger: CAGACACGGGAGCTTTGTCAATAAGCCCACACGAGG...GATCCTACCTTCTGCTTTCGGGCAGCTGCAGCCAGCACAGAAACCTTGCAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039110.12 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | CCCTCTTTTTCTCTCTCTCAAGTGGGCACTAAACCCATGTCCTCGTTGCTCCCACCCATGACTTTGTCGTaGGGATGCAGCCAGCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PSFSLSQVGTKPMSSLLPPMTLS*GCSQPR Trigger: ACGAGGCTGGCTGCATCCCAACGACAAAGTCATGGG...TGGGAGCAACGAGGACATGGGTTTAGTGCCCACTTGAGAGAGAGAAAAAGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | AGCTTGCAAGGTTTCTGTGCTGGCTGCAGCTGCCCGAAAGCAGAAGGTAGGATCTTGGCAATGATCTGTTaGCAGTCGGCTGCCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLQGFCAGCSCPKAEGRILAMIC*QSAAMR Trigger: CCTCATGGCAGCCGACTGCAAACAGATCATTGCCAA...GATCCTACCTTCTGCTTTCGGGCAGCTGCAGCCAGCACAGAAACCTTGCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS CCA 90 bp | ATTCTGGATGTTGACATAGGAGGGGTCATCGAAGAGTTCTCTGCCTaGGCAAGGCGGCGGAGGCAACATCTGTTTACGGACTTCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILDVDIGGVIEEFSA*ARRRRQHLFTDFMV Trigger: GACCATGAAGTCCGTAAACAGATGTTGCCTCCGCCGCCTTGCCCAGGCAGAGAACTCTTCGATGACCCCTCCTATGTCAACATCCAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | AGACGCACACACCTATCCCAAAGGAGGGAGGCAGGATGGGGTTACAGTGAGGGCCGCGAAAGAGATAGATaGCATGTGATGGTTGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RRTHLSQRREAGWGYSEGRERDR*HVMVGN Trigger: ATTGCCAACCATCACATGCAATCTATCTCTTTCGCG...GCCCTCACTGTAACCCCATCCTGCCTCCCTCCTTTGGGATAGGTGTGTGCGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | AAACCCTCTTTTTCTCTCTCTCAAGTGGGCACTAAACCCATGTCCTCGTTGCTCCCTCGTGTGGGCTTATaGACAAAGCTCCCGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KPSFSLSQVGTKPMSSLLPRVGL*TKLPCL Trigger: CAGACACGGGAGCTTTGTCAATAAGCCCACACGAGG...GAGCAACGAGGACATGGGTTTAGTGCCCACTTGAGAGAGAGAAAAAGAGGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | AACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAAAGGGGCTCCTTGTCGCCCCTTaGGCACCAGGCACAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NTAQPNFCSVVLAKKKKGLLVAP*APGTAS Trigger: TGAAGCTGTGCCTGGTGCCAAAGGGGCGACAAGGAG...CCCCTTTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | AAACAGAGGTCCCACAAGTTAGAGAATACGGGAGACGGAAATGGAGAGCATCCTTTGGCAATGATCTGTTaGCAGTCGGCTGCCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQRSHKLENTGDGNGEHPLAMIC*QSAAMR Trigger: CCTCATGGCAGCCGACTGCAAACAGATCATTGCCAA...AGGATGCTCTCCATTTCCGTCTCCCGTATTCTCTAACTTGTGGGACCTCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | CCCACAACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAACCTCGTGTGGGCTTATaGACAAAGCTCCCGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTTLLSQISAQLSWRKRKPRVGL*TKLPCL Trigger: CAGACACGGGAGCTTTGTCAATAAGCCCACACGAGG...TTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTTGTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039110.12 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | CACACATGCAAACATGGGAGGAGCAGGCTTGAGAAATGTATACAGACCCCTTGGTTCCTGAGATACTGTTaGAAGCGCAACTCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HTCKHGRSRLEKCIQTPWFLRYC*KRNSKA Trigger: GGCCTTTGAGTTGCGCTTCAAACAGTATCTCAGGAA...CCAAGGGGTCTGTATACATTTCTCAAGCCTGCTCCTCCCATGTTTGCATGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | GCAAACATGGGAGGAGCAGGCTTGAGAAATGTATACAGACCCCTTGGAGGAAAGCGCGAAAGAGATAGATaGCATGTGATGGTTGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ANMGGAGLRNVYRPLGGKRERDR*HVMVGN Trigger: ATTGCCAACCATCACATGCAATCTATCTCTTTCGCG...CTTTCCTCCAAGGGGTCTGTATACATTTCTCAAGCCTGCTCCTCCCATGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | CTGAAACCCTCTTTTTCTCTCTCTCAAGTGGGCACTAAACCCATGTCCTCGTTGTTCCTGAGATACTGTTaGAAGCGCAACTCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LKPSFSLSQVGTKPMSSLFLRYC*KRNSKA Trigger: GGCCTTTGAGTTGCGCTTCAAACAGTATCTCAGGAA...CAACGAGGACATGGGTTTAGTGCCCACTTGAGAGAGAGAAAAAGAGGGTTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | AAACAGAGGTCCCACAAGTTAGAGAATACGGGAGACGGAAATGGAGAGCATCCTTTCCTGAGATACTGTTaGAAGCGCAACTCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQRSHKLENTGDGNGEHPFLRYC*KRNSKA Trigger: GGCCTTTGAGTTGCGCTTCAAACAGTATCTCAGGAA...AGGATGCTCTCCATTTCCGTCTCCCGTATTCTCTAACTTGTGGGACCTCTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | AAACCCTCTTTTTCTCTCTCTCAAGTGGGCACTAAACCCATGTCCTCGTTGCTCCGCGAAAGAGATAGATaGCATGTGATGGTTGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: KPSFSLSQVGTKPMSSLLRERDR*HVMVGN Trigger: ATTGCCAACCATCACATGCAATCTATCTCTTTCGCG...GAGCAACGAGGACATGGGTTTAGTGCCCACTTGAGAGAGAGAAAAAGAGGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
||
| CDS-3UTR CAA 90 bp | AACACTGCTCAGCCAAATTTCTGCTCAGTTGTCTTGGCGAAAAAGAAAAAGGGGTTCCTGAGATACTGTTaGAAGCGCAACTCAAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: NTAQPNFCSVVLAKKKKGFLRYC*KRNSKA Trigger: GGCCTTTGAGTTGCGCTTCAAACAGTATCTCAGGAA...CCCCTTTTTCTTTTTCGCCAAGACAACTGAGCAGAAATTTGGCTGAGCAGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039110.12 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| CDS-3UTR CAA 90 bp | ATGATAGTCAAAGGCACAAAGTTTAAGGGGAAGCAGAGGGAGTGGGATATGTTACGCGAAAGAGATAGATaGCATGTGATGGTTGGCAAT | + |
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Preference number: 5 (lower is better) Translates to: MIVKGTKFKGKQREWDMLRERDR*HVMVGN Trigger: ATTGCCAACCATCACATGCAATCTATCTCTTTCGCG...TAACATATCCCACTCCCTCTGCTTCCCCTTAAACTTTGTGCCTTTGACTATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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| CDS CCA 72 bp | GTTGACATAGGAGGGGTCATCGAAGAGTTCTCTGCCTaGGCAAGGCGGCGGAGGCAACATCTGTTTACGGAC | + |
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Preference number: 6 (lower is better) Translates to: VDIGGVIEEFSA*ARRRRQHLFTD Trigger: GTCCGTAAACAGATGTTGCCTCCGCCGCCTTGCCCAGGCAGAGAACTCTTCGATGACCCCTCCTATGTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039110.12 ENSMUST00000094378.10 ENSMUST00000107417.9 ENSMUST00000191485.7 |
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