Pregenerated sensors for SHBG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005202Ensembl transcript IDs: ENSMUST00000005334.3
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | TCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATAATCTTGAAAAGATGTGTACCACCTaGTCTGCTTCTCAGAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SCSLGWSQTCYVAKDNLEKMCTT*SASQKG Trigger: CCCCTTCTGAGAAGCAGACAAGGTGGTACACATCTT...TTCAAGATTATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| 3UTR CCA 72 bp | TTTATTTTTAAAGACAGGGTTTCATGTAGCCTGGGCTaGTCTCAAACATGTTATGTAGCCAAGGATAATCTT | + |
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Preference number: 3 (lower is better) Translates to: FIFKDRVSCSLG*SQTCYVAKDNL Trigger: AAGATTATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAAAATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR TCA 90 bp | GACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATAGGGAGAGATGGCCCTaGGGGTGGGACCAGAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: DRVSCSLGWSQTCYVAKDRERWP*GWDQSL Trigger: GAGACTCTGGTCCCACCCTCAGGGCCATCTCTCCCT...ATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CCA 90 bp | GACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATATCCTCATGCTGCGCTaGGAGTGGTCAGCCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: DRVSCSLGWSQTCYVAKDILMLR*EWSARD Trigger: ATCCCTGGCTGACCACTCCCAGCGCAGCATGAGGAT...ATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR TCA 90 bp | TTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCCTCTGGGGGCAGCTGTaGGTCCAGATGTCCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: FKDRVSCSLGWSQTCYVALWGQL*VQMSWL Trigger: AAGCCAGGACATCTGGACTCACAGCTGCCCCCAGAG...GGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CCA 90 bp | TTATTTTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGGGAGAGGCTGAGAGCTaGGCCTGGTGGCCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLKTGFHVAWAGLKHVMGEAES*AWWPSQ Trigger: CTGGCTGGGCCACCAGGCCCAGCTCTCAGCCTCTCC...CATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAAAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR TCA 90 bp | TTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCGACCAAAGCCTACTGTaGGCCGAGCCCAGGCATTGT | + |
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Preference number: 4 (lower is better) Translates to: FKDRVSCSLGWSQTCYVADQSLL*AEPRHC Trigger: ACAATGCCTGGGCTCGGCTCACAGTAGGCTTTGGTC...GGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR GCA 90 bp | GACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATGTGGTCAGCCAGGGATaGAGAGATTTGTCTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DRVSCSLGWSQTCYVAKDVVSQG*RDLSQA Trigger: TGCCTGAGACAAATCTCTGCATCCCTGGCTGACCAC...ATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CCA 90 bp | TCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATAATCTTGAAATGCTGCGCTGGGAGTaGTCAGCCAGGGATGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCSLGWSQTCYVAKDNLEMLRWE*SARDAE Trigger: CTCTGCATCCCTGGCTGACCACTCCCAGCGCAGCAT...TTCAAGATTATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CCA 90 bp | GACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATGGCTGGGGAATGTCTTaGAGACTGAATTCTGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: DRVSCSLGWSQTCYVAKDGWGMS*RLNSAW Trigger: CCACGCAGAATTCAGTCTCCAAGACATTCCCCAGCC...ATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CCA 90 bp | GACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATCTTCTGCTCAGGGCCTaGTCTATGTCCAGTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DRVSCSLGWSQTCYVAKDLLLRA*SMSSLC Trigger: ACAGAGACTGGACATAGACCAGGCCCTGAGCAGAAG...ATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CCA 90 bp | TTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCGGGTCCTGGGCACTCTaGATAGGGTCAATGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKDRVSCSLGWSQTCYVAGSWAL*IGSMCL Trigger: GAGACACATTGACCCTATCCAGAGTGCCCAGGACCC...GGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR TCA 90 bp | TTATTTTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGGTCCAGGGGTCTGCATaGGGCTGGGGAATGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LFLKTGFHVAWAGLKHVMVQGSA*GWGMSW Trigger: CCAAGACATTCCCCAGCCTCATGCAGACCCCTGGAC...CATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR GCA 90 bp | TCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATAATCTTGAAAAAGGTCCAGGGGTCTaGATGAGGCTGGGGAATGTC | + |
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Preference number: 4 (lower is better) Translates to: SCSLGWSQTCYVAKDNLEKGPGV*MRLGNV Trigger: GACATTCCCCAGCCTCATGCAGACCCCTGGACCTTT...TTCAAGATTATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR GCA 90 bp | TTATTTTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGGTGCAATCCTCATGCTaGGCTGGGAGTGGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLKTGFHVAWAGLKHVMVQSSC*AGSGQP Trigger: TGGCTGACCACTCCCAGCGCAGCATGAGGATTGCAC...CATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CCA 90 bp | TCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATAATCTTGAAGACAGGCTCTTGTCCTaGGCCATTGCTGAGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: SCSLGWSQTCYVAKDNLEDRLLS*AIAEVL Trigger: AAGTACCTCAGCAATGGCCCAGGACAAGAGCCTGTC...TTCAAGATTATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CCA 90 bp | GACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATAACTCAAAGGAGGAATaGGGTTTGCTGATTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DRVSCSLGWSQTCYVAKDNSKEE*GLLILV Trigger: CACCAAAATCAGCAAACCCCATTCCTCCTTTGAGTT...ATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR TCA 90 bp | TTATTTTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGGAATGTCTTGGAGACTaGATTCTGCGTGGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFLKTGFHVAWAGLKHVMECLGD*ILRGSL Trigger: CAGGGACCCACGCAGAATTCAGTCTCCAAGACATTC...CATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR TCA 90 bp | TTATTTTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGGGCTCAAGACCACTTTaGCTCTATCCAGCGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LFLKTGFHVAWAGLKHVMGSRPL*LYPASA Trigger: AGCTGACGCTGGATAGAGTCAAAGTGGTCTTGAGCC...CATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CCA 90 bp | TTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAAAATCACTCCCTCTaGATCCCAGGTTCGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: FKDRVSCSLGWSQTCYVAKNHSL*IPGSKL Trigger: GAGTTTCGAACCTGGGATCCAGAGGGAGTGATTTTT...GGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CCA 90 bp | TTATTTTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGAAGGACTTCCATCTTTaGTCCTTGGCTCAAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFLKTGFHVAWAGLKHVMKDFHL*SLAQDH Trigger: GTGGTCTTGAGCCAAGGACCAAAGATGGAAGTCCTT...CATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CCA 90 bp | TTATTTTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTCCATCTTTGGTCCTTaGCTCAAGACCACTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LFLKTGFHVAWAGLKHVMSIFGP*LKTTLT Trigger: AGTCAAAGTGGTCTTGAGCCAAGGACCAAAGATGGA...CATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR TCA 90 bp | TTATTTTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGCTTTGGTTTTGGAGGTaGATGTTAAGCCAAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: LFLKTGFHVAWAGLKHVMLWFWR*MLSQEE Trigger: TTCTTCTTGGCTTAACATTCACCTCCAAAACCAAAG...CATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 90 bp | CAGTTTCCCAGGCTAGTGCGGGGAGAGGCTGAGAGCTGGGCCTGGTaGCCCAGCCAGATATCTCGCCGAATACAGCCGTCCAGGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: QFPRLVRGEAESWAW*PSQISRRIQPSRAG Trigger: GCCTGCCCTGGACGGCTGTATTCGGCGAGATATCTGGCTGGGCCACCAGGCCCAGCTCTCAGCCTCTCCCCGCACTAGCCTGGGAAACTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 90 bp | TCACAGTTTCCCAGGCTAGTGCGGGGAGAGGCTGAGAGCTGGGCCTaGTGGCCCAGCCAGATATCTCGCCGAATACAGCCGTCCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SQFPRLVRGEAESWA*WPSQISRRIQPSRA Trigger: TGCCCTGGACGGCTGTATTCGGCGAGATATCTGGCTGGGCCACCAGGCCCAGCTCTCAGCCTCTCCCCGCACTAGCCTGGGAAACTGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 90 bp | TCCACATCACAGTTTCCCAGGCTAGTGCGGGGAGAGGCTGAGAGCTaGGCCTGGTGGCCCAGCCAGATATCTCGCCGAATACAGCCGTCC | + |
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Preference number: 5 (lower is better) Translates to: STSQFPRLVRGEAES*AWWPSQISRRIQPS Trigger: GGACGGCTGTATTCGGCGAGATATCTGGCTGGGCCACCAGGCCCAGCTCTCAGCCTCTCCCCGCACTAGCCTGGGAAACTGTGATGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS TCA 90 bp | CCGGGTGCCATCTCCCATCGTCCAGCCGAGGACCAAAGCCTACTGTaGGCCGAGCCCAGGCATTGTGTAGCTGGATTTCAAGCTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PGAISHRPAEDQSLL*AEPRHCVAGFQAGQ Trigger: CTGGCCAGCTTGAAATCCAGCTACACAATGCCTGGGCTCGGCTCACAGTAGGCTTTGGTCCTCGGCTGGACGATGGGAGATGGCACCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 90 bp | GGCTCTTGTCCTGGGCCATTGCTGAGGTACTTAGCAGGAGGGTCCTaGGCACTCTGGATAGGGTCAATGTGTCTCAGGGCCCGTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: GSCPGPLLRYLAGGS*ALWIGSMCLRARPW Trigger: CCAGGGACGGGCCCTGAGACACATTGACCCTATCCAGAGTGCCCAGGACCCTCCTGCTAAGTACCTCAGCAATGGCCCAGGACAAGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS GCA 90 bp | ACCCACAGCAGCAGTGAATCCCCGTTCATCTTCAGCTCCACCGGGTaGCATCTCCCATCGTCCAGCCGAGGACCAAAGCCTACTGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: THSSSESPFIFSSTG*HLPSSSRGPKPTVS Trigger: GCTCACAGTAGGCTTTGGTCCTCGGCTGGACGATGGGAGATGGCACCCGGTGGAGCTGAAGATGAACGGGGATTCACTGCTGCTGTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 90 bp | CGAGGACCAAAGCCTACTGTGAGCCGAGCCCAGGCATTGTGTAGCTaGATTTCAAGCTGGCCAGCTCGCAGTCCCAGCAGGAACCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: RGPKPTVSRAQALCS*ISSWPARSPSRNQS Trigger: TGACTGGTTCCTGCTGGGACTGCGAGCTGGCCAGCTTGAAATCCAGCTACACAATGCCTGGGCTCGGCTCACAGTAGGCTTTGGTCCTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS GCA 90 bp | AGACTGAATTCTGCGTGGGTCCCTGGAGGGAAGAACAGTCCAGGTTaGAGGTCCACATCACAGTTTCCCAGGCTAGTGCGGGGAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: RLNSAWVPGGKNSPG*RSTSQFPRLVRGEA Trigger: AGCCTCTCCCCGCACTAGCCTGGGAAACTGTGATGTGGACCTGCAACCTGGACTGTTCTTCCCTCCAGGGACCCACGCAGAATTCAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 90 bp | CCTACTGTGAGCCGAGCCCAGGCATTGTGTAGCTGGATTTCAAGCTaGCCAGCTCGCAGTCCCAGCAGGAACCAGTCATCTTCAGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: PTVSRAQALCSWISS*PARSPSRNQSSSVL Trigger: CAACACTGAAGATGACTGGTTCCTGCTGGGACTGCGAGCTGGCCAGCTTGAAATCCAGCTACACAATGCCTGGGCTCGGCTCACAGTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 90 bp | ATGAGGCTGGGGAATGTCTTGGAGACTGAATTCTGCGTGGGTCCCTaGAGGGAAGAACAGTCCAGGTTGCAGGTCCACATCACAGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: MRLGNVLETEFCVGP*REEQSRLQVHITVS Trigger: GGAAACTGTGATGTGGACCTGCAACCTGGACTGTTCTTCCCTCCAGGGACCCACGCAGAATTCAGTCTCCAAGACATTCCCCAGCCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CAA 90 bp | GACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATAACCATGACAGGCTCTaGTCCTGGGCCATTGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: DRVSCSLGWSQTCYVAKDNHDRL*SWAIAE Trigger: CTCAGCAATGGCCCAGGACAAGAGCCTGTCATGGTT...ATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CAA 90 bp | GACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATAGCCGAGCCCAGGCATaGTGTAGCTGGATTTCAAGC | + |
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Preference number: 5 (lower is better) Translates to: DRVSCSLGWSQTCYVAKDSRAQA*CSWISS Trigger: GCTTGAAATCCAGCTACACAATGCCTGGGCTCGGCT...ATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS TCA 90 bp | TTTGGTCCTTGGCTCAAGACCACTTTGACTCTATCCAGCGTCAGCTaGAGAGGGAGTCCCACGTCCAAGGGTAAAACTACCTTAGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: FGPWLKTTLTLSSVS*RGSPTSKGKTTLGS Trigger: AGAACCTAAGGTAGTTTTACCCTTGGACGTGGGACTCCCTCTTCAGCTGACGCTGGATAGAGTCAAAGTGGTCTTGAGCCAAGGACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CAA 90 bp | TTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAGCGGAAACCGAAGTTaGGAAGTAGGGAGGAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: FKDRVSCSLGWSQTCYVASGNRS*EVGRRS Trigger: GCTCCTCCTCCCTACTTCCAAACTTCGGTTTCCGCT...GGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CAA 90 bp | TTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCTCTTGTCCTGGGCCATaGCTGAGGTACTTAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: FKDRVSCSLGWSQTCYVASCPGP*LRYLAG Trigger: TCCTGCTAAGTACCTCAGCAATGGCCCAGGACAAGA...GGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CAA 90 bp | GACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATAAAGGACTTCCATCTTaGGTCCTTGGCTCAAGACCA | + |
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Preference number: 5 (lower is better) Translates to: DRVSCSLGWSQTCYVAKDKGLPS*VLGSRP Trigger: TGGTCTTGAGCCAAGGACCAAAGATGGAAGTCCTTT...ATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CAA 90 bp | TTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAACCACGCTTTGGTTTaGGAGGTGAATGTTAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: FKDRVSCSLGWSQTCYVANHALV*EVNVKP Trigger: TGGCTTAACATTCACCTCCAAAACCAAAGCGTGGTT...GGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CAA 90 bp | TCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATAATCTTGAATGGGGTTTGCTGATTTaGGTGAGGTCAATGGTCATA | + |
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Preference number: 5 (lower is better) Translates to: SCSLGWSQTCYVAKDNLEWGLLI*VRSMVI Trigger: TATGACCATTGACCTCACCAAAATCAGCAAACCCCA...TTCAAGATTATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CAA 90 bp | TCATGTAGCCTGGGCTGGTCTCAAACATGTTATGTAGCCAAGGATAATCTTGAAAGACAGAACCACGCTTaGGTTTTGGAGGTGAATGTT | + |
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Preference number: 5 (lower is better) Translates to: SCSLGWSQTCYVAKDNLERQNHA*VLEVNV Trigger: AACATTCACCTCCAAAACCAAAGCGTGGTTCTGTCT...TTCAAGATTATCCTTGGCTACATAACATGTTTGAGACCAGCCCAGGCTACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS-3UTR CAA 90 bp | TTATTTTTAAAGACAGGGTTTCATGTAGCCTGGGCTGGTCTCAAACATGTTATGGTCCAGTCTCTGTCCTaGTACCCAAAAGTCACTCAG | + |
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Preference number: 5 (lower is better) Translates to: LFLKTGFHVAWAGLKHVMVQSLS*YPKVTQ Trigger: CTGAGTGACTTTTGGGTACAAGGACAGAGACTGGAC...CATAACATGTTTGAGACCAGCCCAGGCTACATGAAACCCTGTCTTTAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 72 bp | CCCAGGCTAGTGCGGGGAGAGGCTGAGAGCTGGGCCTaGTGGCCCAGCCAGATATCTCGCCGAATACAGCCG | + |
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Preference number: 6 (lower is better) Translates to: PRLVRGEAESWA*WPSQISRRIQP Trigger: CGGCTGTATTCGGCGAGATATCTGGCTGGGCCACCAGGCCCAGCTCTCAGCCTCTCCCCGCACTAGCCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS TCA 72 bp | CTCTCTCCTGGTAAAGCCCCAAGGGAGAGATGGCCCTaGGGGTGGGACCAGAGTCTCCAGAGGGAGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LSPGKAPRERWP*GWDQSLQREAG Trigger: ACCTGCCTCCCTCTGGAGACTCTGGTCCCACCCTCAGGGCCATCTCTCCCTTGGGGCTTTACCAGGAGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 72 bp | CAGTTTCCCAGGCTAGTGCGGGGAGAGGCTGAGAGCTaGGCCTGGTGGCCCAGCCAGATATCTCGCCGAATA | + |
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Preference number: 6 (lower is better) Translates to: QFPRLVRGEAES*AWWPSQISRRI Trigger: TATTCGGCGAGATATCTGGCTGGGCCACCAGGCCCAGCTCTCAGCCTCTCCCCGCACTAGCCTGGGAAACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CAA 90 bp | TCGTCCAGCCGAGGACCAAAGCCTACTGTGAGCCGAGCCCAGGCATaGTGTAGCTGGATTTCAAGCTGGCCAGCTCGCAGTCCCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSRGPKPTVSRAQA*CSWISSWPARSPSR Trigger: CCTGCTGGGACTGCGAGCTGGCCAGCTTGAAATCCAGCTACACAATGCCTGGGCTCGGCTCACAGTAGGCTTTGGTCCTCGGCTGGACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS GCA 72 bp | AGCAGTGAATCCCCGTTCATCTTCAGCTCCACCGGGTaGCATCTCCCATCGTCCAGCCGAGGACCAAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSESPFIFSSTG*HLPSSSRGPKP Trigger: AGGCTTTGGTCCTCGGCTGGACGATGGGAGATGGCACCCGGTGGAGCTGAAGATGAACGGGGATTCACTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS GCA 72 bp | TCTGCGTGGGTCCCTGGAGGGAAGAACAGTCCAGGTTaGAGGTCCACATCACAGTTTCCCAGGCTAGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: SAWVPGGKNSPG*RSTSQFPRLVR Trigger: CCGCACTAGCCTGGGAAACTGTGATGTGGACCTGCAACCTGGACTGTTCTTCCCTCCAGGGACCCACGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 72 bp | TTGCTGAGGTACTTAGCAGGAGGGTCCTGGGCACTCTaGATAGGGTCAATGTGTCTCAGGGCCCGTCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LLRYLAGGSWAL*IGSMCLRARPW Trigger: CCAGGGACGGGCCCTGAGACACATTGACCCTATCCAGAGTGCCCAGGACCCTCCTGCTAAGTACCTCAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 72 bp | CCTGGGCCATTGCTGAGGTACTTAGCAGGAGGGTCCTaGGCACTCTGGATAGGGTCAATGTGTCTCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PGPLLRYLAGGS*ALWIGSMCLRA Trigger: GGCCCTGAGACACATTGACCCTATCCAGAGTGCCCAGGACCCTCCTGCTAAGTACCTCAGCAATGGCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 72 bp | AAGCCTACTGTGAGCCGAGCCCAGGCATTGTGTAGCTaGATTTCAAGCTGGCCAGCTCGCAGTCCCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KPTVSRAQALCS*ISSWPARSPSR Trigger: CCTGCTGGGACTGCGAGCTGGCCAGCTTGAAATCCAGCTACACAATGCCTGGGCTCGGCTCACAGTAGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 72 bp | AGCCGAGCCCAGGCATTGTGTAGCTGGATTTCAAGCTaGCCAGCTCGCAGTCCCAGCAGGAACCAGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: SRAQALCSWISS*PARSPSRNQSS Trigger: AGATGACTGGTTCCTGCTGGGACTGCGAGCTGGCCAGCTTGAAATCCAGCTACACAATGCCTGGGCTCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CAA 72 bp | CGAGGACCAAAGCCTACTGTGAGCCGAGCCCAGGCATaGTGTAGCTGGATTTCAAGCTGGCCAGCTCGCAGT | + |
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Preference number: 6 (lower is better) Translates to: RGPKPTVSRAQA*CSWISSWPARS Trigger: ACTGCGAGCTGGCCAGCTTGAAATCCAGCTACACAATGCCTGGGCTCGGCTCACAGTAGGCTTTGGTCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CAA 72 bp | ATGGTCATAACCATGACAGGCTCTTGTCCTGGGCCATaGCTGAGGTACTTAGCAGGAGGGTCCTGGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: MVITMTGSCPGP*LRYLAGGSWAL Trigger: GAGTGCCCAGGACCCTCCTGCTAAGTACCTCAGCAATGGCCCAGGACAAGAGCCTGTCATGGTTATGACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CCA 72 bp | GAGGTCAATGGTCATAACCATGACAGGCTCTTGTCCTaGGCCATTGCTGAGGTACTTAGCAGGAGGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: EVNGHNHDRLLS*AIAEVLSRRVL Trigger: CAGGACCCTCCTGCTAAGTACCTCAGCAATGGCCCAGGACAAGAGCCTGTCATGGTTATGACCATTGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CAA 90 bp | GTCCTGGCTTCTGCTCAGGGCCTGGTCTATGTCCAGTCTCTGTCCTaGTACCCAAAAGTCACTCAGGCAGAAGGAAGCAGAAGAACTCTC | + |
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Preference number: 6 (lower is better) Translates to: VLASAQGLVYVQSLS*YPKVTQAEGSRRTL Trigger: GAGAGTTCTTCTGCTTCCTTCTGCCTGAGTGACTTTTGGGTACAAGGACAGAGACTGGACATAGACCAGGCCCTGAGCAGAAGCCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS TCA 72 bp | TGGCTCAAGACCACTTTGACTCTATCCAGCGTCAGCTaGAGAGGGAGTCCCACGTCCAAGGGTAAAACTACC | + |
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Preference number: 6 (lower is better) Translates to: WLKTTLTLSSVS*RGSPTSKGKTT Trigger: GGTAGTTTTACCCTTGGACGTGGGACTCCCTCTTCAGCTGACGCTGGATAGAGTCAAAGTGGTCTTGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS TCA 72 bp | GGACTTCCATCTTTGGTCCTTGGCTCAAGACCACTTTaGCTCTATCCAGCGTCAGCTGAAGAGGGAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GLPSLVLGSRPL*LYPASAEEGVP Trigger: TGGGACTCCCTCTTCAGCTGACGCTGGATAGAGTCAAAGTGGTCTTGAGCCAAGGACCAAAGATGGAAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS TCA 72 bp | GCCTCGGAAGACAGAACCACGCTTTGGTTTTGGAGGTaGATGTTAAGCCAAGAAGAATTTGTTCCTGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ASEDRTTLWFWR*MLSQEEFVPVP Trigger: TGGAACAGGAACAAATTCTTCTTGGCTTAACATTCACCTCCAAAACCAAAGCGTGGTTCTGTCTTCCGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CAA 72 bp | AGGTTCTGCCTCGGAAGACAGAACCACGCTTTGGTTTaGGAGGTGAATGTTAAGCCAAGAAGAATTTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RFCLGRQNHALV*EVNVKPRRICS Trigger: GGAACAAATTCTTCTTGGCTTAACATTCACCTCCAAAACCAAAGCGTGGTTCTGTCTTCCGAGGCAGAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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| CDS CAA 72 bp | TACCTTAGGTTCTGCCTCGGAAGACAGAACCACGCTTaGGTTTTGGAGGTGAATGTTAAGCCAAGAAGAATT | + |
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Preference number: 6 (lower is better) Translates to: YLRFCLGRQNHA*VLEVNVKPRRI Trigger: AATTCTTCTTGGCTTAACATTCACCTCCAAAACCAAAGCGTGGTTCTGTCTTCCGAGGCAGAACCTAAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005334.3 |
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