RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH3TC2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045629

Ensembl transcript IDs: ENSMUST00000051720.6, ENSMUST00000235652.2, ENSMUST00000235860.2, ENSMUST00000236759.2

Found 471 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCAAGAAGGGGAAGGGTCTCTTCAGAGGGCCAGGCTCCCACCACTaGGCCACCGTGCCCTCTCTGAAGAGCACCCGAAGGGATTGCTGT +
Preference number: 1 (lower is better)
Translates to: VKKGKGLFRGPGSHH*ATVPSLKSTRRDCC
Trigger: ACAGCAATCCCTTCGGGTGCTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTGAAGAGACCCTTCCCCTTCTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR GCA 90 bp AGGGGACTCTGGCAGATGCTGTCTAGCCTGTTCTTAATGGTGTTCTaGAGCTCCTCGTCACCCATCAGGACCGCAGCTGCTAGCGCCAGC +
Preference number: 1 (lower is better)
Translates to: RGLWQMLSSLFLMVF*SSSSPIRTAAASAS
Trigger: GCTGGCGCTAGCAGCTGCGGTCCTGATGGGTGACGAGGAGCTGCAGAACACCATTAAGAACAGGCTAGACAGCATCTGCCAGAGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR GCA 90 bp CTGAGCCACCGTGCCCTCTCTGAAGAGCACCCGAAGGGATTGCTGTaGCACAGGGGACTCTGGCAGATGCTGTCTAGCCTGTTCTTAATG +
Preference number: 1 (lower is better)
Translates to: LSHRALSEEHPKGLL*HRGLWQMLSSLFLM
Trigger: CATTAAGAACAGGCTAGACAGCATCTGCCAGAGTCCCCTGTGGCACAGCAATCCCTTCGGGTGCTCTTCAGAGAGGGCACGGTGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR GCA 90 bp ACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATaGCTCTCACAGAGCCCTTCTCCTTCTGGCCGTTGCTCTTCTCCA +
Preference number: 1 (lower is better)
Translates to: TVTWATFQRQSMEPR*LSQSPSPSGRCSSP
Trigger: TGGAGAAGAGCAACGGCCAGAAGGAGAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR CCA 90 bp CTCTCTGAAGAGCACCCGAAGGGATTGCTGTGCCACAGGGGACTCTaGCAGATGCTGTCTAGCCTGTTCTTAATGGTGTTCTGCAGCTCC +
Preference number: 1 (lower is better)
Translates to: LSEEHPKGLLCHRGL*QMLSSLFLMVFCSS
Trigger: GGAGCTGCAGAACACCATTAAGAACAGGCTAGACAGCATCTGCCAGAGTCCCCTGTGGCACAGCAATCCCTTCGGGTGCTCTTCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR CCA 90 bp TGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTaGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAG +
Preference number: 1 (lower is better)
Translates to: WEVLQEPSFQVEWRM*IPVGPLGFPPGPSK
Trigger: CTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR TCA 90 bp CTTTCTCATAGCCCTCGAGGCTTATCTGCAGCTCTGTCAGCTTGTTaGAGATCCGCAGCTCGGTTCTCAGCGCCTTCATTCTCCTCGCTA +
Preference number: 1 (lower is better)
Translates to: LSHSPRGLSAALSAC*RSAARFSAPSFSSL
Trigger: TAGCGAGGAGAATGAAGGCGCTGAGAACCGAGCTGCGGATCTTCAACAAGCTGACAGAGCTGCAGATAAGCCTCGAGGGCTATGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR TCA 90 bp GTCACCTGCTTCTTCGTAAAGCTTGAGAGCAAGGGAGGGCTCTTCTaGCCTCAAGGCTGTCTGGATGGCCTCCTGCAAATACAGTTCTAC +
Preference number: 1 (lower is better)
Translates to: VTCFFVKLESKGGLF*PQGCLDGLLQIQFY
Trigger: GTAGAACTGTATTTGCAGGAGGCCATCCAGACAGCCTTGAGGTCAGAAGAGCCCTCCCTTGCTCTCAAGCTTTACGAAGAAGCAGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR TCA 90 bp GTTGAGAGAAGGCATCTTGGAGCTGTTTGTGTACAAGAGTCACAGTaGCCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCC +
Preference number: 1 (lower is better)
Translates to: VERRHLGAVCVQESQ*PGQHSRGKAWSQDA
Trigger: GGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAGCTCCAAGATGCCTTCTCTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR TCA 90 bp TTCCCCAGTGCATTGCCTGCTTCCCTCCTTTCTCTAGAGCTGGGTTaGGAGAAGGCATCTTGGAGCTGTTTGTGTACAAGAGTCACAGTG +
Preference number: 1 (lower is better)
Translates to: FPSALPASLLSLELG*EKASWSCLCTRVTV
Trigger: CACTGTGACTCTTGTACACAAACAGCTCCAAGATGCCTTCTCTCAACCCAGCTCTAGAGAAAGGAGGGAAGCAGGCAATGCACTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR TCA 90 bp CTCACAGAGCCCTTCTCCTTCTGGCCGTTGCTCTTCTCCATAAAATaGGGTGATAACTTGAAGCCTCCCAGTCCGGATCTAAGAACTTGG +
Preference number: 1 (lower is better)
Translates to: LTEPFSFWPLLFSIK*GDNLKPPSPDLRTW
Trigger: CCAAGTTCTTAGATCCGGACTGGGAGGCTTCAAGTTATCACCTCATTTTATGGAGAAGAGCAACGGCCAGAAGGAGAAGGGCTCTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR TCA 90 bp CAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTaGTTCTCAGGCCAGAGGTCAGAGGCTACCTTAGGACCAGGACAT +
Preference number: 1 (lower is better)
Translates to: QQLSSFEAPLEGDLC*FSGQRSEATLGPGH
Trigger: ATGTCCTGGTCCTAAGGTAGCCTCTGACCTCTGGCCTGAGAATCAACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR TCA 90 bp TTATCACTTCCCCTAGAGCTGGAGACATGGGTAGTTGTGAGCTGCTaGATATGTGTGCTGGGAACTGAACTTAGGTCCTCTGCAAGAGGA +
Preference number: 1 (lower is better)
Translates to: LSLPLELETWVVVSC*ICVLGTELRSSARG
Trigger: TCCTCTTGCAGAGGACCTAAGTTCAGTTCCCAGCACACATATTCAGCAGCTCACAACTACCCATGTCTCCAGCTCTAGGGGAAGTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR CCA 90 bp TATCCTCAGAGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTaGAAGGGGATCTGTGTTGATTCTCAGGCCAGAGGTCAGAGGCTA +
Preference number: 1 (lower is better)
Translates to: YPQRIASNYLLLKLH*KGICVDSQARGQRL
Trigger: TAGCCTCTGACCTCTGGCCTGAGAATCAACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCTCTGAGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR TCA 90 bp GGATGTCTTGATATCCTCAGAGAATTGCCAGCAACTATCTTCTTTTaGAGCTCCACTGGAAGGGGATCTGTGTTGATTCTCAGGCCAGAG +
Preference number: 1 (lower is better)
Translates to: GCLDILRELPATIFF*SSTGRGSVLILRPE
Trigger: CTCTGGCCTGAGAATCAACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCTCTGAGGATATCAAGACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR TCA 90 bp CCAATGTTACAAGCCACTGGAACAAGTTTTAATCTAACTTCTAGATaGTGTGGTTGTATCCATGATGCTGTCTCTCCCAGAGATATGGTC +
Preference number: 1 (lower is better)
Translates to: PMLQATGTSFNLTSR*CGCIHDAVSPRDMV
Trigger: GACCATATCTCTGGGAGAGACAGCATCATGGATACAACCACATCATCTAGAAGTTAGATTAAAACTTGTTCCAGTGGCTTGTAACATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR-3UTR CCA 90 bp GCCAGGCTCCCACCACTGAGCCACCGTGCCCTCTCTGAAGAGCACCCGAAGGGATCCCAGTTGGACCCCTaGGCTTTCCACCTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: ARLPPLSHRALSEEHPKGSQLDP*AFHLAL
Trigger: AAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGA...TCCCTTCGGGTGCTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGGGAGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR CCA 90 bp CAGAGGGCCAGGCTCCCACCACTGAGCCACCGTGCCCTCTCTGAAGAGCACCCGTGCCACAGGGGACTCTaGCAGATGCTGTCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: QRARLPPLSHRALSEEHPCHRGL*QMLSSL
Trigger: CAGGCTAGACAGCATCTGCCAGAGTCCCCTGTGGCA...CGGGTGCTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR TCA 90 bp TCAAGAAGGGGAAGGGTCTCTTCAGAGGGCCAGGCTCCCACCACTGAGCCACCGTACGCAGGCTCTCCTTaGTGCAGGCGAGGGACCTTC +
Preference number: 2 (lower is better)
Translates to: SRRGRVSSEGQAPTTEPPYAGSP*CRRGTF
Trigger: GAAGGTCCCTCGCCTGCATCAAGGAGAGCCTGCGTA...CGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTGAAGAGACCCTTCCCCTTCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR CAA 90 bp CCACCACTGAGCCACCGTGCCCTCTCTGAAGAGCACCCGAAGGGATaGCTGTGCCACAGGGGACTCTGGCAGATGCTGTCTAGCCTGTTC +
Preference number: 2 (lower is better)
Translates to: PPLSHRALSEEHPKG*LCHRGLWQMLSSLF
Trigger: GAACAGGCTAGACAGCATCTGCCAGAGTCCCCTGTGGCACAGCAATCCCTTCGGGTGCTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR CCA 90 bp TCTCTTCAGAGGGCCAGGCTCCCACCACTGAGCCACCGTGCCCTCTCTGAAGAGCTAGCCGTGGCAATGTaGTCAAGAAGGGGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: SLQRARLPPLSHRALSEELAVAM*SRRGRV
Trigger: GACCCTTCCCCTTCTTGACCACATTGCCACGGCTAG...CTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTGAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR GCA 90 bp TGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGGGCACCAGGACAGTCTaGTCACACTTTCCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: WRMWIPVGPLGFPPGPSKGTRTV*SHFPQC
Trigger: GCACTGGGGAAAGTGTGAGCAGACTGTCCTGGTGCC...CTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp GGAGCCAAGATGCCTCTCACAGAGCCCTTCTCCTTCTGGCCGTTGCTCTTCTCCCCGGATCTAAGAACTTaGGGCAGGAAGGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: GAKMPLTEPFSFWPLLFSPDLRT*GRKAAA
Trigger: AGCTGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGG...GGAGAAGAGCAACGGCCAGAAGGAGAAGGGCTCTGTGAGAGGCATCTTGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp TTCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCAGAGTACAGCGCCTCCTTaGGACTCTGCAGCCATGGTG +
Preference number: 2 (lower is better)
Translates to: FPENTGEGTRTVCSHFPQSTAPP*DSAAMV
Trigger: CACCATGGCTGCAGAGTCCCAAGGAGGCGCTGTACT...CTGGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR TCA 90 bp TTCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCAGACCAGCTCCTGTTTCTaGTCTCCCGTGAGGACACTC +
Preference number: 2 (lower is better)
Translates to: FPENTGEGTRTVCSHFPQTSSCF*SPVRTL
Trigger: GAGTGTCCTCACGGGAGATCAGAAACAGGAGCTGGT...CTGGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR GCA 90 bp TCGCTAAAGGAACAGCGCCAGCCCGGTAGTACTCCACAGCACGATGCCTATGGCAGCATGGAGCCAAGATaGCTCTCACAGAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: SLKEQRQPGSTPQHDAYGSMEPR*LSQSPS
Trigger: AGAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCT...GCCATAGGCATCGTGCTGTGGAGTACTACCGGGCTGGCGCTGTTCCTTTAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR GCA 90 bp CCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCCAAAACCACCCCAGTGCATTGCCTaGTTCCCTCCTTTCTCTAGA +
Preference number: 2 (lower is better)
Translates to: PLGFPPGPSKAESPEPKPPQCIA*FPPFSR
Trigger: TCTAGAGAAAGGAGGGAAGCAGGCAATGCACTGGGG...TGGTTTTGGCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp TCTTCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCCTAGCCGTGGCAATGTaGTCAAGAAGGGGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: SSLRTLVRAPGQSAHTFPLAVAM*SRRGRV
Trigger: GACCCTTCCCCTTCTTGACCACATTGCCACGGCTAG...GGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp CCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCGGATCTAAGAACTTaGGGCAGGAAGGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: PGRMENVDPSWTPGLSTWPDLRT*GRKAAA
Trigger: AGCTGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGG...CCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR TCA 90 bp GCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTACCCAGCAGTTCCCATaGGCACCAAGTGCTGACTTC +
Preference number: 2 (lower is better)
Translates to: AKLPGRMENVDPSWTPGLTQQFP*APSADF
Trigger: GAAGTCAGCACTTGGTGCTCATGGGAACTGCTGGGT...AAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR GCA 90 bp CTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCCCCTCGAGGCTTATCTaGAGCTCTGTCAGCTTGTTG +
Preference number: 2 (lower is better)
Translates to: LGNIPEAKHGAKMPLTEPPSRLI*SSVSLL
Trigger: CAACAAGCTGACAGAGCTGCAGATAAGCCTCGAGGG...GGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR CCA 90 bp GGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGGAGCCCTTCTCCTTCTaGCCGTTGCTCTTCTCCATA +
Preference number: 2 (lower is better)
Translates to: GAKLPGRMENVDPSWTPGEPFSF*PLLFSI
Trigger: TATGGAGAAGAGCAACGGCCAGAAGGAGAAGGGCTC...CCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp TTCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCAGGAGCCCTTCTCCTTCTaGCCGTTGCTCTTCTCCATA +
Preference number: 2 (lower is better)
Translates to: FPENTGEGTRTVCSHFPQEPFSF*PLLFSI
Trigger: TATGGAGAAGAGCAACGGCCAGAAGGAGAAGGGCTC...CTGGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp CCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGTCCAGAGGCAAAGCATaGAGCCAAGATGCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: PGRMENVDPSWTPGLSTWSRGKA*SQDASH
Trigger: GTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGA...CCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR TCA 90 bp GGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTTCTCTAGAGCTGGGTTaGGAGAAGGCATCTTGGAGC +
Preference number: 2 (lower is better)
Translates to: GQHSRGKAWSQDASHRALSLELG*EKASWS
Trigger: GCTCCAAGATGCCTTCTCTCAACCCAGCTCTAGAGA...AAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR GCA 90 bp CAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGCCCCAGTGCATTGCCTaGTTCCCTCCTTTCTCTAGA +
Preference number: 2 (lower is better)
Translates to: QEPSFQVEWRMWIPVGPLPQCIA*FPPFSR
Trigger: TCTAGAGAAAGGAGGGAAGCAGGCAATGCACTGGGG...CAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp CAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCTCCTAGCCGTGGCAATGTaGTCAAGAAGGGGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: QHSRGKAWSQDASHRALLLAVAM*SRRGRV
Trigger: GACCCTTCCCCTTCTTGACCACATTGCCACGGCTAG...GAGAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp TCTCTTCAGAGGGCCAGGCTCCCACCACTGAGCCACCGTGCCCTCTCTGAAGAGGCGAAAAAGAAACAATaGGTTCTTCCACAGGCACTA +
Preference number: 2 (lower is better)
Translates to: SLQRARLPPLSHRALSEEAKKKQ*VLPQAL
Trigger: TAGTGCCTGTGGAAGAACCCATTGTTTCTTTTTCGC...CTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTGAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR TCA 90 bp ACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTTCTCTAGAGCTGGGTTaGGAGAAGGCATCTTGGAGC +
Preference number: 2 (lower is better)
Translates to: TGAKLPGRMENVDPSWTPSLELG*EKASWS
Trigger: GCTCCAAGATGCCTTCTCTCAACCCAGCTCTAGAGA...AGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR TCA 90 bp TACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGGCTCTGTCAGCTTGTTaGAGATCCGCAGCTCGGTTC +
Preference number: 2 (lower is better)
Translates to: YKSHSDLGNIPEAKHGAKALSAC*RSAARF
Trigger: GAACCGAGCTGCGGATCTTCAACAAGCTGACAGAGC...CTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR TCA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATACAGTCGCCAGGCGGTaGAAAGCCACCAGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDTVARR*KATSSC
Trigger: ACAGGAGCTGGTGGCTTTTCACCGCCTGGCGACTGT...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR CCA 90 bp TACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGTCCAGAGGCAAAGCATaGAGCCAAGATGCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: YKSHSDLGNIPEAKHGAKSRGKA*SQDASH
Trigger: GTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGA...CTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp GGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTTCAAGGCTGTCTGGATaGCCTCCTGCAAATACAGTT +
Preference number: 2 (lower is better)
Translates to: GQHSRGKAWSQDASHRALSRLSG*PPANTV
Trigger: AACTGTATTTGCAGGAGGCCATCCAGACAGCCTTGA...AAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR TCA 90 bp CCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGATGAGCACCAAGTGCTaGCTTCTTTTGGTTTTGAAG +
Preference number: 2 (lower is better)
Translates to: PGRMENVDPSWTPGLSTWMSTKC*LLLVLK
Trigger: CTTCAAAACCAAAAGAAGTCAGCACTTGGTGCTCAT...CCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp TTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGGAGCCCTTCTCCTTCTaGCCGTTGCTCTTCTCCATA +
Preference number: 2 (lower is better)
Translates to: LCTRVTVTWATFQRQSMEEPFSF*PLLFSI
Trigger: TATGGAGAAGAGCAACGGCCAGAAGGAGAAGGGCTC...CTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp TGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCGAAAAAGAAACAATaGGTTCTTCCACAGGCACTA +
Preference number: 2 (lower is better)
Translates to: WRMWIPVGPLGFPPGPSKAKKKQ*VLPQAL
Trigger: TAGTGCCTGTGGAAGAACCCATTGTTTCTTTTTCGC...CTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp TACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGGTAGAATGGAGAATGTaGATCCCAGTTGGACCCCTG +
Preference number: 2 (lower is better)
Translates to: YKSHSDLGNIPEAKHGAKVEWRM*IPVGPL
Trigger: CAGGGGTCCAACTGGGATCCACATTCTCCATTCTAC...CTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR TCA 90 bp TGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGCTCTTCTCCATAAAATaGGGTGATAACTTGAAGCCT +
Preference number: 2 (lower is better)
Translates to: WRMWIPVGPLGFPPGPSKLFSIK*GDNLKP
Trigger: AGGCTTCAAGTTATCACCTCATTTTATGGAGAAGAG...CTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR GCA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATAGCATGGAGCCAAGATaGCTCTCACAGAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDSMEPR*LSQSPS
Trigger: AGAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCT...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR GCA 90 bp CCCAGCAGTTCCCATGAGCACCAAGTGCTGACTTCTTTTGGTTTTGAAGAAAGCCTTTCCCCAGTGCATTaGCTGCTTCCCTCCTTTCTC +
Preference number: 2 (lower is better)
Translates to: PSSSHEHQVLTSFGFEESLSPVH*LLPSFL
Trigger: GAGAAAGGAGGGAAGCAGGCAATGCACTGGGGAAAG...GCTTTCTTCAAAACCAAAAGAAGTCAGCACTTGGTGCTCATGGGAACTGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR TCA 90 bp CAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGCTCTTCTCCATAAAATaGGGTGATAACTTGAAGCCT +
Preference number: 2 (lower is better)
Translates to: QEPSFQVEWRMWIPVGPLLFSIK*GDNLKP
Trigger: AGGCTTCAAGTTATCACCTCATTTTATGGAGAAGAG...CAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR TCA 90 bp TCCTCGTCACCCATCAGGACCGCAGCTGCTAGCGCCAGCAGAAAATATTCAGTACTCTTCTCCATAAAATaGGGTGATAACTTGAAGCCT +
Preference number: 2 (lower is better)
Translates to: SSSPIRTAAASASRKYSVLFSIK*GDNLKP
Trigger: AGGCTTCAAGTTATCACCTCATTTTATGGAGAAGAG...TACTGAATATTTTCTGCTGGCGCTAGCAGCTGCGGTCCTGATGGGTGACGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR TCA 90 bp TACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGAGCACCAAGTGCTaGCTTCTTTTGGTTTTGAAG +
Preference number: 2 (lower is better)
Translates to: YKSHSDLGNIPEAKHGAKMSTKC*LLLVLK
Trigger: CTTCAAAACCAAAAGAAGTCAGCACTTGGTGCTCAT...CTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CCA 90 bp CTCCAAATGCTGTCCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCTCAGCTGAATATGTGTGCTaGGAACTGAACTTAGGTCCT +
Preference number: 2 (lower is better)
Translates to: LQMLSTKRHTRPKASPSSAEYVC*ELNLGP
Trigger: AGGACCTAAGTTCAGTTCCCAGCACACATATTCAGC...TGAGGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGGACAGCATTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR TCA 72 bp GGCCAGGCTCCCACCACTGAGCCACCGTGCCCTCTCTaGAGAGCACCCGAAGGGATTGCTGTGCCACAGGGG +
Preference number: 3 (lower is better)
Translates to: GQAPTTEPPCPL*RAPEGIAVPQG
Trigger: CCCCTGTGGCACAGCAATCCCTTCGGGTGCTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGGGAGCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR TCA 72 bp GGGAAGGGTCTCTTCAGAGGGCCAGGCTCCCACCACTaGGCCACCGTGCCCTCTCTGAAGAGCACCCGAAGG +
Preference number: 3 (lower is better)
Translates to: GKGLFRGPGSHH*ATVPSLKSTRR
Trigger: CCTTCGGGTGCTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTGAAGAGACCCTTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR GCA 72 bp CGTGCCCTCTCTGAAGAGCACCCGAAGGGATTGCTGTaGCACAGGGGACTCTGGCAGATGCTGTCTAGCCTG +
Preference number: 3 (lower is better)
Translates to: RALSEEHPKGLL*HRGLWQMLSSL
Trigger: CAGGCTAGACAGCATCTGCCAGAGTCCCCTGTGGCACAGCAATCCCTTCGGGTGCTCTTCAGAGAGGGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR GCA 72 bp GCCACCGTGCCCTCTCTGAAGAGCACCCGAAGGGATTaGTGTGCCACAGGGGACTCTGGCAGATGCTGTCTA +
Preference number: 3 (lower is better)
Translates to: ATVPSLKSTRRD*CATGDSGRCCL
Trigger: TAGACAGCATCTGCCAGAGTCCCCTGTGGCACAGCAATCCCTTCGGGTGCTCTTCAGAGAGGGCACGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR TCA 72 bp TCTCCCCTAGGTCGACGAATATACGCAGGCTCTCCTTaGTGCAGGCGAGGGACCTTCGGAGGGACCTGGATG +
Preference number: 3 (lower is better)
Translates to: SPLGRRIYAGSP*CRRGTFGGTWM
Trigger: CATCCAGGTCCCTCCGAAGGTCCCTCGCCTGCATCAAGGAGAGCCTGCGTATATTCGTCGACCTAGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR CAA 90 bp TCGCTAAAGGAACAGCGCCAGCCCGGTAGTACTCCACAGCACGATGCCTATGGCATACGCAGGCTCTCCTaGATGCAGGCGAGGGACCTT +
Preference number: 3 (lower is better)
Translates to: SLKEQRQPGSTPQHDAYGIRRLS*MQARDL
Trigger: AAGGTCCCTCGCCTGCATCAAGGAGAGCCTGCGTAT...GCCATAGGCATCGTGCTGTGGAGTACTACCGGGCTGGCGCTGTTCCTTTAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR CAA 90 bp CCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCCAAAACCAAGCTCTGTCAGCTTGTaGAAGATCCGCAGCTCGGTT +
Preference number: 3 (lower is better)
Translates to: PLGFPPGPSKAESPEPKPSSVSL*KIRSSV
Trigger: AACCGAGCTGCGGATCTTCAACAAGCTGACAGAGCT...TGGTTTTGGCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR CAA 90 bp CCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCTCACAAGAGGCCTCCCGAGAGAGAGAAGGGGTaGGGGGTCGGGATGCCCTTA +
Preference number: 3 (lower is better)
Translates to: PPKDIQDQKPALPHKRPPEREKG*GVGMPL
Trigger: TAAGGGCATCCCGACCCCCAACCCCTTCTCTCTCTC...GGGAGGCCTCTTGTGAGGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR GCA 72 bp TGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATaGCTCTCACAGAGCCCTTCTCCTTCTGGCCGTTGC +
Preference number: 3 (lower is better)
Translates to: WATFQRQSMEPR*LSQSPSPSGRC
Trigger: GCAACGGCCAGAAGGAGAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CAA 90 bp CAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCTCTCCGGATCTAAGAACTaGGGGCAGGAAGGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: QHSRGKAWSQDASHRALLSGSKN*GQEGSS
Trigger: GCTGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGA...GAGAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CAA 90 bp GGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGATGGGCATCCTTCAGTaGGTAGAAAGTGAGTCGGCC +
Preference number: 3 (lower is better)
Translates to: GAKLPGRMENVDPSWTPGMGILQ*VESESA
Trigger: GGCCGACTCACTTTCTACCAACTGAAGGATGCCCAT...CCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR TCA 72 bp AGCCCTCGAGGCTTATCTGCAGCTCTGTCAGCTTGTTaGAGATCCGCAGCTCGGTTCTCAGCGCCTTCATTC +
Preference number: 3 (lower is better)
Translates to: SPRGLSAALSAC*RSAARFSAPSF
Trigger: GAATGAAGGCGCTGAGAACCGAGCTGCGGATCTTCAACAAGCTGACAGAGCTGCAGATAAGCCTCGAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR GCA 72 bp ATGCCTATGGCGGGTGCCGTTGAAGAACACGTCACCTaGTTCTTCGTAAAGCTTGAGAGCAAGGGAGGGCTC +
Preference number: 3 (lower is better)
Translates to: MPMAGAVEEHVT*FFVKLESKGGL
Trigger: GAGCCCTCCCTTGCTCTCAAGCTTTACGAAGAAGCAGGTGACGTGTTCTTCAACGGCACCCGCCATAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR CCA 72 bp GATAACTTGAAGCCTCCCAGTCCGGATCTAAGAACTTaGGGCAGGAAGGCAGCAGCTAGCCGTGGCAATGTG +
Preference number: 3 (lower is better)
Translates to: DNLKPPSPDLRT*GRKAAASRGNV
Trigger: CACATTGCCACGGCTAGCTGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAAGTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR CCA 72 bp GAGCACCCGAAGGGATTGCTGTGCCACAGGGGACTCTaGCAGATGCTGTCTAGCCTGTTCTTAATGGTGTTC +
Preference number: 3 (lower is better)
Translates to: EHPKGLLCHRGL*QMLSSLFLMVF
Trigger: GAACACCATTAAGAACAGGCTAGACAGCATCTGCCAGAGTCCCCTGTGGCACAGCAATCCCTTCGGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR CAA 90 bp GTCTGGATGGCCTCCTGCAAATACAGTTCTACCAGCTCATCTTCCTGCATGAGGTCCGGATCTAAGAACTaGGGGCAGGAAGGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: VWMASCKYSSTSSSSCMRSGSKN*GQEGSS
Trigger: GCTGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGA...CCTCATGCAGGAAGATGAGCTGGTAGAACTGTATTTGCAGGAGGCCATCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR GCA 72 bp AGGACAGTCTGCTCACACTTTCCCCAGTGCATTGCCTaGTTCCCTCCTTTCTCTAGAGCTGGGTTGAGAGAA +
Preference number: 3 (lower is better)
Translates to: RTVCSHFPQCIA*FPPFSRAGLRE
Trigger: TTCTCTCAACCCAGCTCTAGAGAAAGGAGGGAAGCAGGCAATGCACTGGGGAAAGTGTGAGCAGACTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR CCA 72 bp TGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATaGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTT +
Preference number: 3 (lower is better)
Translates to: WEVLQEPSFQVE*RMWIPVGPLGF
Trigger: AAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR CCA 72 bp CAAGGGAGGGCTCTTCTGACCTCAAGGCTGTCTGGATaGCCTCCTGCAAATACAGTTCTACCAGCTCATCTT +
Preference number: 3 (lower is better)
Translates to: QGRALLTSRLSG*PPANTVLPAHL
Trigger: AAGATGAGCTGGTAGAACTGTATTTGCAGGAGGCCATCCAGACAGCCTTGAGGTCAGAAGAGCCCTCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR CAA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATTCCGGATCTAAGAACTaGGGGCAGGAAGGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDSGSKN*GQEGSS
Trigger: GCTGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGA...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CAA 90 bp TACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGTTCTCTAGAGCTGGGTaGAGAGAAGGCATCTTGGAG +
Preference number: 3 (lower is better)
Translates to: YKSHSDLGNIPEAKHGAKFSRAG*REGILE
Trigger: CTCCAAGATGCCTTCTCTCAACCCAGCTCTAGAGAA...CTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR TCA 72 bp AGGCATCTTGGAGCTGTTTGTGTACAAGAGTCACAGTaGCCTGGGCAACATTCCAGAGGCAAAGCATGGAGC +
Preference number: 3 (lower is better)
Translates to: RHLGAVCVQESQ*PGQHSRGKAWS
Trigger: GCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAGCTCCAAGATGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR TCA 72 bp TTCTTCGTAAAGCTTGAGAGCAAGGGAGGGCTCTTCTaGCCTCAAGGCTGTCTGGATGGCCTCCTGCAAATA +
Preference number: 3 (lower is better)
Translates to: FFVKLESKGGLF*PQGCLDGLLQI
Trigger: TATTTGCAGGAGGCCATCCAGACAGCCTTGAGGTCAGAAGAGCCCTCCCTTGCTCTCAAGCTTTACGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR TCA 72 bp CCCCTAGAGCTGGAGACATGGGTAGTTGTGAGCTGCTaGATATGTGTGCTGGGAACTGAACTTAGGTCCTCT +
Preference number: 3 (lower is better)
Translates to: PLELETWVVVSC*ICVLGTELRSS
Trigger: AGAGGACCTAAGTTCAGTTCCCAGCACACATATTCAGCAGCTCACAACTACCCATGTCTCCAGCTCTAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR TCA 72 bp CCCTTCTCCTTCTGGCCGTTGCTCTTCTCCATAAAATaGGGTGATAACTTGAAGCCTCCCAGTCCGGATCTA +
Preference number: 3 (lower is better)
Translates to: PFSFWPLLFSIK*GDNLKPPSPDL
Trigger: TAGATCCGGACTGGGAGGCTTCAAGTTATCACCTCATTTTATGGAGAAGAGCAACGGCCAGAAGGAGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR TCA 72 bp TCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTaGTTCTCAGGCCAGAGGTCAGAGGCTACCTTAGGA +
Preference number: 3 (lower is better)
Translates to: SSFEAPLEGDLC*FSGQRSEATLG
Trigger: TCCTAAGGTAGCCTCTGACCTCTGGCCTGAGAATCAACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR CCA 72 bp ATGCAGAATTCTCAAGCCTTAGCCTGCGTAAGCTTCTaGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAA +
Preference number: 3 (lower is better)
Translates to: MQNSQALACVSF*EVLQEPSFQVE
Trigger: TTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAGCTTACGCAGGCTAAGGCTTGAGAATTCTGCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR-3UTR CAA 90 bp TCAGGTAGCAGTCTTCAGCCATCTCATACATGTTCAGAGAGAAGTACACAGTCGTTCTCTAGAGCTGGGTaGAGAGAAGGCATCTTGGAG +
Preference number: 3 (lower is better)
Translates to: SGSSLQPSHTCSERSTQSFSRAG*REGILE
Trigger: CTCCAAGATGCCTTCTCTCAACCCAGCTCTAGAGAA...CGACTGTGTACTTCTCTCTGAACATGTATGAGATGGCTGAAGACTGCTACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
3UTR-3UTR CAA 90 bp ACAAGAGCTCTTAGCCACGGAGCCCTATCTGCAGATTCATACTGTATGTTTTTAGGAAGGGGATCTGTGTaGATTCTCAGGCCAGAGGTC +
Preference number: 3 (lower is better)
Translates to: TRALSHGALSADSYCMFLGRGSV*ILRPEV
Trigger: GACCTCTGGCCTGAGAATCAACACAGATCCCCTTCC...TAAAAACATACAGTATGAATCTGCAGATAGGGCTCCGTGGCTAAGAGCTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR-3UTR CAA 90 bp TATGTGTGCTGGGAACTGAACTTAGGTCCTCTGCAAGAGGAACAAGAGCTCTTAAGCAACTATCTTCTTTaGAAGCTCCACTGGAAGGGG +
Preference number: 3 (lower is better)
Translates to: YVCWELNLGPLQEEQELLSNYLL*KLHWKG
Trigger: CCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCT...TAAGAGCTCTTGTTCCTCTTGCAGAGGACCTAAGTTCAGTTCCCAGCACACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR GCA 72 bp TGCCCCCTGCTGGATGTCTTGATATCCTCAGAGAATTaGCAGCAACTATCTTCTTTTGAAGCTCCACTGGAA +
Preference number: 3 (lower is better)
Translates to: CPLLDVLISSEN*QQLSSFEAPLE
Trigger: TTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCTCTGAGGATATCAAGACATCCAGCAGGGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR TCA 72 bp GATATCCTCAGAGAATTGCCAGCAACTATCTTCTTTTaGAGCTCCACTGGAAGGGGATCTGTGTTGATTCTC +
Preference number: 3 (lower is better)
Translates to: DILRELPATIFF*SSTGRGSVLIL
Trigger: GAGAATCAACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCTCTGAGGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR TCA 72 bp TGTTTGCTCCAGTTGTGTTCTCCGTTCATCACTTTTTaGGCTGTCAGAATCAGTGTGTTGCTTTCTACCCAA +
Preference number: 3 (lower is better)
Translates to: CLLQLCSPFITF*AVRISVLLSTQ
Trigger: TTGGGTAGAAAGCAACACACTGATTCTGACAGCTCAAAAAGTGATGAACGGAGAACACAACTGGAGCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR GCA 72 bp CGTTCATCACTTTTTGAGCTGTCAGAATCAGTGTGTTaGTTTCTACCCAATGTTACAAGCCACTGGAACAAG +
Preference number: 3 (lower is better)
Translates to: RSSLFELSESVC*FLPNVTSHWNK
Trigger: CTTGTTCCAGTGGCTTGTAACATTGGGTAGAAAGCAACACACTGATTCTGACAGCTCAAAAAGTGATGAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR TCA 72 bp CAAGCCACTGGAACAAGTTTTAATCTAACTTCTAGATaGTGTGGTTGTATCCATGATGCTGTCTCTCCCAGA +
Preference number: 3 (lower is better)
Translates to: QATGTSFNLTSR*CGCIHDAVSPR
Trigger: TCTGGGAGAGACAGCATCATGGATACAACCACATCATCTAGAAGTTAGATTAAAACTTGTTCCAGTGGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR GCA 72 bp GTCAACTGTCATTGTTCACATACTTTAGTCTCCAAATaGTGTCCACCAAAAGACATACAAGACCAAAAGCCA +
Preference number: 3 (lower is better)
Translates to: VNCHCSHTLVSK*CPPKDIQDQKP
Trigger: TGGCTTTTGGTCTTGTATGTCTTTTGGTGGACAGCATTTGGAGACTAAAGTATGTGAACAATGACAGTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp TCGCTAAAGGAACAGCGCCAGCCCGGTAGTACTCCACAGCACGATGCCTATGGCCAGGGGCTCCAGGGCTaGCATGGGCACCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SLKEQRQPGSTPQHDAYGQGLQG*HGHQAP
Trigger: AGGGGCCTGGTGCCCATGTCAGCCCTGGAGCCCCTG...GCCATAGGCATCGTGCTGTGGAGTACTACCGGGCTGGCGCTGTTCCTTTAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR GCA 90 bp TCAAGAAGGGGAAGGGTCTCTTCAGAGGGCCAGGCTCCCACCACTGAGCCACCGGGCACAACTTCCTCGTaGCGGCCAAGGCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SRRGRVSSEGQAPTTEPPGTTSS*RPRLRS
Trigger: GCTCCTGAGCCTTGGCCGGCACGAGGAAGTTGTGCC...CGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTGAAGAGACCCTTCCCCTTCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CAGAGGGCCAGGCTCCCACCACTGAGCCACCGTGCCCTCTCTGAAGAGCACCCGGTCTCCTTGCTGGCTTaGAGTTCGGAATACAGCCGG +
Preference number: 4 (lower is better)
Translates to: QRARLPPLSHRALSEEHPVSLLA*SSEYSR
Trigger: CCGGCTGTATTCCGAACTCCAAGCCAGCAAGGAGAC...CGGGTGCTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp GGCAGGAAGGCAGCAGCTAGCCGTGGCAATGTGGTCAAGAAGGGGAAGGGTCTCCATCCTCCTCGGGGCTaGAGTCTCCAGAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: GRKAAASRGNVVKKGKGLHPPRG*SLQNRW
Trigger: CCAGCGGTTCTGGAGACTCCAGCCCCGAGGAGGATG...GAGACCCTTCCCCTTCTTGACCACATTGCCACGGCTAGCTGCTGCCTTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGGGCCTGCCTGAGGGTTaGGCAGGCCAGGGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: WRMWIPVGPLGFPPGPSKGLPEG*AGQGGN
Trigger: GTTTCCGCCCTGGCCTGCCCAACCCTCAGGCAGGCC...CTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp GGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCCCATCTCCCGATCCCTaGGTTGCTGAGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GRMENVDPSWTPGLSTWPPSPDP*VAEPGP
Trigger: TGGCCCTGGCTCAGCAACTCAGGGATCGGGAGATGG...GGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp GGCAGGAAGGCAGCAGCTAGCCGTGGCAATGTGGTCAAGAAGGGGAAGGGTCTCACAGTCGCCAGGCGGTaGAAAGCCACCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GRKAAASRGNVVKKGKGLTVARR*KATSSC
Trigger: ACAGGAGCTGGTGGCTTTTCACCGCCTGGCGACTGT...GAGACCCTTCCCCTTCTTGACCACATTGCCACGGCTAGCTGCTGCCTTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTGGCCTGCCTGAGGGTTaGGCAGGCCAGGGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: AKLPGRMENVDPSWTPGLGLPEG*AGQGGN
Trigger: GTTTCCGCCCTGGCCTGCCCAACCCTCAGGCAGGCC...AAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR CAA 72 bp AGCCACCGTGCCCTCTCTGAAGAGCACCCGAAGGGATaGCTGTGCCACAGGGGACTCTGGCAGATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SHRALSEEHPKG*LCHRGLWQMLS
Trigger: AGACAGCATCTGCCAGAGTCCCCTGTGGCACAGCAATCCCTTCGGGTGCTCTTCAGAGAGGGCACGGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp TACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGCAGGGGCTCCAGGGCTaGCATGGGCACCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: YKSHSDLGNIPEAKHGAKQGLQG*HGHQAP
Trigger: AGGGGCCTGGTGCCCATGTCAGCCCTGGAGCCCCTG...CTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp GCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTCCGAGGAGGCTGAGATaGGCTCATCCTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: AKLPGRMENVDPSWTPGLPRRLR*AHPPRG
Trigger: GCCCCGAGGAGGATGAGCTCATCTCAGCCTCCTCGG...AAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp AGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCGCCTCCTTGGGACTCTaGAGCCATGGTGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: RMENVDPSWTPGLSTWPFASLGL*SHGGHR
Trigger: CCTGTGCCCACCATGGCTGCAGAGTCCCAAGGAGGC...GAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp CAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCTCCTTCCTTGTCAGCTaGCTGAGCCACGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: QLDPWAFHLALLRLSLLSSFLVS*LSHGAH
Trigger: GTGTGCTCCGTGGCTCAGCCAGCTGACAAGGAAGGA...GCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp AGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCCCAGGAAGCAGGACCTaGCCTCCAGAAGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: RMENVDPSWTPGLSTWPFPGSRT*PPEGHS
Trigger: GGAGTGGCCTTCTGGAGGCCAGGTCCTGCTTCCTGG...GAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TTGAAGCCTCCCAGTCCGGATCTAAGAACTTGGGGCAGGAAGGCAGCAGCTAGCCCAGGAAGCAGGACCTaGCCTCCAGAAGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: LKPPSPDLRTWGRKAAASPGSRT*PPEGHS
Trigger: GGAGTGGCCTTCTGGAGGCCAGGTCCTGCTTCCTGG...GCTAGCTGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GATAACTTGAAGCCTCCCAGTCCGGATCTAAGAACTTGGGGCAGGAAGGCAGCAGGCCTGCCTGAGGGTTaGGCAGGCCAGGGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: DNLKPPSPDLRTWGRKAAGLPEG*AGQGGN
Trigger: GTTTCCGCCCTGGCCTGCCCAACCCTCAGGCAGGCC...TGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAAGTTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
3UTR CAA 72 bp CTCTCCCCTAGGTCGACGAATATACGCAGGCTCTCCTaGATGCAGGCGAGGGACCTTCGGAGGGACCTGGAT +
Preference number: 4 (lower is better)
Translates to: LSPRSTNIRRLS*MQARDLRRDLD
Trigger: ATCCAGGTCCCTCCGAAGGTCCCTCGCCTGCATCAAGGAGAGCCTGCGTATATTCGTCGACCTAGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp CTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCCCTGTAAGGCTGCGTTaGCACACCTCCTGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: LGNIPEAKHGAKMPLTEPPVRLR*HTSWSD
Trigger: GTCGCTCCAGGAGGTGTGTCAACGCAGCCTTACAGG...GGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp AGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACAGGGCTCAGGGGCTCCAGGGCTaGCATGGGCACCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RGYLRTRTCHSHLQNHRAQGLQG*HGHQAP
Trigger: AGGGGCCTGGTGCCCATGTCAGCCCTGGAGCCCCTG...AGCCCTGTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp CCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCTCACAAGAGGCCTCCCCCGAGGAGGCTGAGATaGGCTCATCCTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PPKDIQDQKPALPHKRPPPRRLR*AHPPRG
Trigger: GCCCCGAGGAGGATGAGCTCATCTCAGCCTCCTCGG...GGGAGGCCTCTTGTGAGGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp GAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTTACGCAGGCTCTCCTTaGTGCAGGCGAGGGACCTTC +
Preference number: 4 (lower is better)
Translates to: EWRMWIPVGPLGFPPGPSYAGSP*CRRGTF
Trigger: GAAGGTCCCTCGCCTGCATCAAGGAGAGCCTGCGTA...AGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp GGCAGGAAGGCAGCAGCTAGCCGTGGCAATGTGGTCAAGAAGGGGAAGGGTCTCAAGGGAGGGCTCTTCTaGCCTCAAGGCTGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: GRKAAASRGNVVKKGKGLKGGLF*PQGCLD
Trigger: ATCCAGACAGCCTTGAGGTCAGAAGAGCCCTCCCTT...GAGACCCTTCCCCTTCTTGACCACATTGCCACGGCTAGCTGCTGCCTTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp GAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTCCGAAGGGATTGCTGTaGCACAGGGGACTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: EWRMWIPVGPLGFPPGPSPKGLL*HRGLWQ
Trigger: CTGCCAGAGTCCCCTGTGGCACAGCAATCCCTTCGG...AGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCCATCCTCCTCGGGGCTaGAGTCTCCAGAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: GNIPEAKHGAKMPLTEPFHPPRG*SLQNRW
Trigger: CCAGCGGTTCTGGAGACTCCAGCCCCGAGGAGGATG...GAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTCATCCTCCTCGGGGCTaGAGTCTCCAGAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: AKLPGRMENVDPSWTPGLHPPRG*SLQNRW
Trigger: CCAGCGGTTCTGGAGACTCCAGCCCCGAGGAGGATG...AAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp AGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCAGTCCCAGGAGGTTGTaGACCACTCCCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RMENVDPSWTPGLSTWPFSPRRL*TTPLWV
Trigger: GACCCAGAGGGGAGTGGTCCACAACCTCCTGGGACT...GAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAGTCCCAGGAGGTTGTaGACCACTCCCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: EWRMWIPVGPLGFPPGPSSPRRL*TTPLWV
Trigger: GACCCAGAGGGGAGTGGTCCACAACCTCCTGGGACT...AGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TCTCTTCAGAGGGCCAGGCTCCCACCACTGAGCCACCGTGCCCTCTCTGAAGAGGCAGGAGATAACCCCTaGCTGACTGCTGCATACATG +
Preference number: 4 (lower is better)
Translates to: SLQRARLPPLSHRALSEEAGDNP*LTAAYM
Trigger: CATGTATGCAGCAGTCAGCCAGGGGTTATCTCCTGC...CTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTGAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCCCAGACACCGAAGCTTaGCCCAACCAGAGTAACACC +
Preference number: 4 (lower is better)
Translates to: QLDPWAFHLALLRLSLLSPDTEA*PNQSNT
Trigger: GGTGTTACTCTGGTTGGGCCAAGCTTCGGTGTCTGG...GCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCAGTACAGCGCCTCCTTaGGACTCTGCAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: GRMENVDPSWTPGLSTWPSTAPP*DSAAMV
Trigger: CACCATGGCTGCAGAGTCCCAAGGAGGCGCTGTACT...GGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTGCCACAGGGGACTCTaGCAGATGCTGTCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: GRMENVDPSWTPGLSTWPCHRGL*QMLSSL
Trigger: CAGGCTAGACAGCATCTGCCAGAGTCCCCTGTGGCA...GGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp TGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGCCACCAGCCTGCTGTTaGGCCAGTACGTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: WRMWIPVGPLGFPPGPSKPPACC*ASTCGQ
Trigger: TTGACCACACGTACTGGCTCAACAGCAGGCTGGTGG...CTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp GTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGACAGTCGCCAGGCGGTaGAAAGCCACCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VTWATFQRQSMEPRCLSQTVARR*KATSSC
Trigger: ACAGGAGCTGGTGGCTTTTCACCGCCTGGCGACTGT...CTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp AGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCAGGCACAACTTCCTCGTaGCGGCCAAGGCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SFQVEWRMWIPVGPLGFPGTTSS*RPRLRS
Trigger: GCTCCTGAGCCTTGGCCGGCACGAGGAAGTTGTGCC...TGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp GATAACTTGAAGCCTCCCAGTCCGGATCTAAGAACTTGGGGCAGGAAGGCAGCAGCCTCCTTGGGACTCTaGAGCCATGGTGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: DNLKPPSPDLRTWGRKAAASLGL*SHGGHR
Trigger: CCTGTGCCCACCATGGCTGCAGAGTCCCAAGGAGGC...TGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAAGTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTTGCCACAGGGGACTCTaGCAGATGCTGTCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: EWRMWIPVGPLGFPPGPSCHRGL*QMLSSL
Trigger: CAGGCTAGACAGCATCTGCCAGAGTCCCCTGTGGCA...AGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp GCCTTAGCCTGCGTAAGCTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTACCTGTAAGGCTGCGTTaGCACACCTCCTGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: ALACVSFWEVLQEPSFQVPVRLR*HTSWSD
Trigger: GTCGCTCCAGGAGGTGTGTCAACGCAGCCTTACAGG...TACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAGCTTACGCAGGCTAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp GGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCCACCAGCCTGCTGTTaGGCCAGTACGTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GQHSRGKAWSQDASHRALPPACC*ASTCGQ
Trigger: TTGACCACACGTACTGGCTCAACAGCAGGCTGGTGG...AAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp TGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGTGGTGCTCAGGTCCATaGACAGTTCCGGGTCATCGA +
Preference number: 4 (lower is better)
Translates to: WRMWIPVGPLGFPPGPSKWCSGP*TVPGHR
Trigger: TCGATGACCCGGAACTGTTCATGGACCTGAGCACCA...CTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp TTGAAGCCTCCCAGTCCGGATCTAAGAACTTGGGGCAGGAAGGCAGCAGCTAGCTGGTGCTCAGGTCCATaGACAGTTCCGGGTCATCGA +
Preference number: 4 (lower is better)
Translates to: LKPPSPDLRTWGRKAAASWCSGP*TVPGHR
Trigger: TCGATGACCCGGAACTGTTCATGGACCTGAGCACCA...GCTAGCTGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp CAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCAAAGTTTGGTCTTCCTaGTGCTTAGTCGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QLDPWAFHLALLRLSLLSKVWSS*CLVGPG
Trigger: TCCTGGGCCGACTAAGCATCAGGAAGACCAAACTTT...GCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp GGCAGGAAGGCAGCAGCTAGCCGTGGCAATGTGGTCAAGAAGGGGAAGGGTCTCGACTTGAGGGTCAAGTaGCCAAGATTGGCCATAGAC +
Preference number: 4 (lower is better)
Translates to: GRKAAASRGNVVKKGKGLDLRVK*PRLAID
Trigger: GTCTATGGCCAATCTTGGTCACTTGACCCTCAAGTC...GAGACCCTTCCCCTTCTTGACCACATTGCCACGGCTAGCTGCTGCCTTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp CCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCGGAGCACACGGCTCTaGAGAAGAAGTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: PGRMENVDPSWTPGLSTWRSTRL*RRSDLP
Trigger: AGGAAGGTCACTTCTTCTGCAGAGCCGTGTGCTCCG...CCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCCAAAACCATCCAGTCTCTCTTCCTaGGAAGGCCACAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: PLGFPPGPSKAESPEPKPSSLSS*EGHRFL
Trigger: CAGGAATCTGTGGCCTTCCCAGGAAGAGAGACTGGA...TGGTTTTGGCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCGATCGATGCTCCTGGTaGGGACAAAGCCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: LGNIPEAKHGAKMPLTEPDRCSW*GQSPLL
Trigger: GAGAAGTGGGCTTTGTCCCCACCAGGAGCATCGATC...GGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TCGCTAAAGGAACAGCGCCAGCCCGGTAGTACTCCACAGCACGATGCCTATGGCCTTCCTCTCACTTCCTaGGGACCAGAGAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: SLKEQRQPGSTPQHDAYGLPLTS*GPERTP
Trigger: AGGAGTTCTCTCTGGTCCCCAGGAAGTGAGAGGAAG...GCCATAGGCATCGTGCTGTGGAGTACTACCGGGCTGGCGCTGTTCCTTTAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp TCTTCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCTGGGCCCATGTCATGTaGCTCATCTTGGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: SSLRTLVRAPGQSAHTFPWAHVM*LILAHF
Trigger: GAAGTGGGCCAAGATGAGCCACATGACATGGGCCCA...GGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp CTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTGGGCCCATGTCATGTaGCTCATCTTGGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: LGNIPEAKHGAKMPLTEPWAHVM*LILAHF
Trigger: GAAGTGGGCCAAGATGAGCCACATGACATGGGCCCA...GGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TTGAAGCCTCCCAGTCCGGATCTAAGAACTTGGGGCAGGAAGGCAGCAGCTAGCAGTAGGCCTGCCAAATaGAAAGAGACATCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LKPPSPDLRTWGRKAAASSRPAK*KETSPG
Trigger: CCCGGGGGATGTCTCTTTCCATTTGGCAGGCCTACT...GCTAGCTGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GGAGCCAAGATGCCTCTCACAGAGCCCTTCTCCTTCTGGCCGTTGCTCTTCTCCGTCCTCTGGATGTCCTaGTCACTCAGTTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: GAKMPLTEPFSFWPLLFSVLWMS*SLSSSQ
Trigger: CTGTGAGGAACTGAGTGACCAGGACATCCAGAGGAC...GGAGAAGAGCAACGGCCAGAAGGAGAAGGGCTCTGTGAGAGGCATCTTGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp CAGAGGGCCAGGCTCCCACCACTGAGCCACCGTGCCCTCTCTGAAGAGCACCCGTATATGTTTTCCAAGTaGTTGTCATCCACAGACACT +
Preference number: 4 (lower is better)
Translates to: QRARLPPLSHRALSEEHPYMFSK*LSSTDT
Trigger: AGTGTCTGTGGATGACAATCACTTGGAAAACATATA...CGGGTGCTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp AGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTCACTGACTTCCCAATaGACCACTGCAGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: RMENVDPSWTPGLSTWPFSLTSQ*TTAAQV
Trigger: TACCTGGGCTGCAGTGGTTCATTGGGAAGTCAGTGA...GAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp CCCAGCAGTTCCCATGAGCACCAAGTGCTGACTTCTTTTGGTTTTGAAGAAAGCCCGAGGAGGCTGAGATaGGCTCATCCTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PSSSHEHQVLTSFGFEESPRRLR*AHPPRG
Trigger: GCCCCGAGGAGGATGAGCTCATCTCAGCCTCCTCGG...GCTTTCTTCAAAACCAAAAGAAGTCAGCACTTGGTGCTCATGGGAACTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp CTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATCCGAGGAGGCTGAGATaGGCTCATCCTCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LFVYKSHSDLGNIPEAKHPRRLR*AHPPRG
Trigger: GCCCCGAGGAGGATGAGCTCATCTCAGCCTCCTCGG...ATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp GCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTGGTGCTCAGGTCCATaGACAGTTCCGGGTCATCGA +
Preference number: 4 (lower is better)
Translates to: AKLPGRMENVDPSWTPGLWCSGP*TVPGHR
Trigger: TCGATGACCCGGAACTGTTCATGGACCTGAGCACCA...AAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp GCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTGGGGACCACGTTTTTaGACAGAGGCCACTGCGAGA +
Preference number: 4 (lower is better)
Translates to: AKLPGRMENVDPSWTPGLWGPRF*TEATAR
Trigger: TCTCGCAGTGGCCTCTGTTCAAAAACGTGGTCCCCA...AAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp CAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGTGGGGACCACGTTTTTaGACAGAGGCCACTGCGAGA +
Preference number: 4 (lower is better)
Translates to: QEPSFQVEWRMWIPVGPLWGPRF*TEATAR
Trigger: TCTCGCAGTGGCCTCTGTTCAAAAACGTGGTCCCCA...CAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp GGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCGACTTGAGGGTCAAGTaGCCAAGATTGGCCATAGAC +
Preference number: 4 (lower is better)
Translates to: GRMENVDPSWTPGLSTWPDLRVK*PRLAID
Trigger: GTCTATGGCCAATCTTGGTCACTTGACCCTCAAGTC...GGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp GAGGTCAGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACCCATCTCCCGATCCCTaGGTTGCTGAGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: EVRGYLRTRTCHSHLQNHPSPDP*VAEPGP
Trigger: TGGCCCTGGCTCAGCAACTCAGGGATCGGGAGATGG...GTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp GCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTACCAGCTCCTGTTTCTaGTCTCCCGTGAGGACACTC +
Preference number: 4 (lower is better)
Translates to: AKLPGRMENVDPSWTPGLTSSCF*SPVRTL
Trigger: GAGTGTCCTCACGGGAGATCAGAAACAGGAGCTGGT...AAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp TTGGAGCTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAGGCACAACTTCCTCGTaGCGGCCAAGGCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LELFVYKSHSDLGNIPEAGTTSS*RPRLRS
Trigger: GCTCCTGAGCCTTGGCCGGCACGAGGAAGTTGTGCC...TGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAGCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp TCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCAGTTGTCCAGAAAGGAGCTaGAGACGTTCTGCGAATGGC +
Preference number: 4 (lower is better)
Translates to: SLRTLVRAPGQSAHTFPSCPERS*RRSANG
Trigger: GCCATTCGCAGAACGTCTGCAGCTCCTTTCTGGACA...ACTGGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp GGCAGGAAGGCAGCAGCTAGCCGTGGCAATGTGGTCAAGAAGGGGAAGGGTCTCCCATCAGGAGATTGGTaGTGGAGGTACATCTTAGAC +
Preference number: 4 (lower is better)
Translates to: GRKAAASRGNVVKKGKGLPSGDW*WRYILD
Trigger: GTCTAAGATGTACCTCCAGCACCAATCTCCTGATGG...GAGACCCTTCCCCTTCTTGACCACATTGCCACGGCTAGCTGCTGCCTTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp TTGAAGCCTCCCAGTCCGGATCTAAGAACTTGGGGCAGGAAGGCAGCAGCTAGCCCCTCGAGGCTTATCTaGAGCTCTGTCAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LKPPSPDLRTWGRKAAASPSRLI*SSVSLL
Trigger: CAACAAGCTGACAGAGCTGCAGATAAGCCTCGAGGG...GCTAGCTGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp AGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCAAGCACCCGAAGGGATTaGTGTGCCACAGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: SFQVEWRMWIPVGPLGFPSTRRD*CATGDS
Trigger: AGAGTCCCCTGTGGCACAGCAATCCCTTCGGGTGCT...TGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp TCAAGAAGGGGAAGGGTCTCTTCAGAGGGCCAGGCTCCCACCACTGAGCCACCGGTGCTTAGGTGTTGGTaGCTTAAGCCAAACAGCAAT +
Preference number: 4 (lower is better)
Translates to: SRRGRVSSEGQAPTTEPPVLRCW*LKPNSN
Trigger: ATTGCTGTTTGGCTTAAGGCACCAACACCTAAGCAC...CGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTGAAGAGACCCTTCCCCTTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CAGAGGGCCAGGCTCCCACCACTGAGCCACCGTGCCCTCTCTGAAGAGCACCCGTTGGGTCATATTCTGTaGCAGGAAACATTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QRARLPPLSHRALSEEHPLGHIL*QETFSL
Trigger: AAGAGAAAATGTTTCCTGCCACAGAATATGACCCAA...CGGGTGCTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp GGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGGAGAGCACCAGGTCTTaGGTCATATTCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GAKLPGRMENVDPSWTPGESTRS*VIFCGR
Trigger: CCTGCCACAGAATATGACCCAAGACCTGGTGCTCTC...CCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp TCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCAGTAGGAACTGGTCCTTCTaGGACTGGACACTCACCAAC +
Preference number: 4 (lower is better)
Translates to: SLRTLVRAPGQSAHTFPSRNWSF*DWTLTN
Trigger: GTTGGTGAGTGTCCAGTCCCAGAAGGACCAGTTCCT...ACTGGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCCAAAACCAAAGGTGATGAGGAACTaGTCCTTCTGGGACTGGACA +
Preference number: 4 (lower is better)
Translates to: PLGFPPGPSKAESPEPKPKVMRN*SFWDWT
Trigger: TGTCCAGTCCCAGAAGGACCAGTTCCTCATCACCTT...TGGTTTTGGCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCCAAGATCGATGCTCCTaGTGGGGACAAAGCCCACTT +
Preference number: 4 (lower is better)
Translates to: LGNIPEAKHGAKMPLTEPQDRCS*WGQSPL
Trigger: AAGTGGGCTTTGTCCCCACCAGGAGCATCGATCTTG...GGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GAGGTCAGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACCATCCTCCTCGGGGCTaGAGTCTCCAGAACCGCTGG +
Preference number: 4 (lower is better)
Translates to: EVRGYLRTRTCHSHLQNHHPPRG*SLQNRW
Trigger: CCAGCGGTTCTGGAGACTCCAGCCCCGAGGAGGATG...GTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp CAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCTCATGTGGCTCATCTTaGCCCACTTCCTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: QLDPWAFHLALLRLSLLSSCGSS*PTSLKS
Trigger: AGACTTCAAGGAAGTGGGCCAAGATGAGCCACATGA...GCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGTAGGCCTGCCAAATaGAAAGAGACATCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: VTWATFQRQSMEPRCLSQSRPAK*KETSPG
Trigger: CCCGGGGGATGTCTCTTTCCATTTGGCAGGCCTACT...CTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TCTTCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCGTCCTCTGGATGTCCTaGTCACTCAGTTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: SSLRTLVRAPGQSAHTFPVLWMS*SLSSSQ
Trigger: CTGTGAGGAACTGAGTGACCAGGACATCCAGAGGAC...GGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGGTCCTCTGGATGTCCTaGTCACTCAGTTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: GAKLPGRMENVDPSWTPGVLWMS*SLSSSQ
Trigger: CTGTGAGGAACTGAGTGACCAGGACATCCAGAGGAC...CCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACAGGGCTCAGTCCCAGGAGGTTGTaGACCACTCCCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: EATLGPGHVIPTFKITGLSPRRL*TTPLWV
Trigger: GACCCAGAGGGGAGTGGTCCACAACCTCCTGGGACT...GAGCCCTGTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp GAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTGCAGGAGATAACCCCTaGCTGACTGCTGCATACATG +
Preference number: 4 (lower is better)
Translates to: EWRMWIPVGPLGFPPGPSAGDNP*LTAAYM
Trigger: CATGTATGCAGCAGTCAGCCAGGGGTTATCTCCTGC...AGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCCAGACACCGAAGCTTaGCCCAACCAGAGTAACACC +
Preference number: 4 (lower is better)
Translates to: GQHSRGKAWSQDASHRALPDTEA*PNQSNT
Trigger: GGTGTTACTCTGGTTGGGCCAAGCTTCGGTGTCTGG...AAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp ACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTAGTACAGCGCCTCCTTaGGACTCTGCAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: TGAKLPGRMENVDPSWTPSTAPP*DSAAMV
Trigger: CACCATGGCTGCAGAGTCCCAAGGAGGCGCTGTACT...AGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp TCTTCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCACTCTTCACACAGAATaGGAGCACCAGGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SSLRTLVRAPGQSAHTFPTLHTE*EHQVLG
Trigger: ACCCAAGACCTGGTGCTCTCATTCTGTGTGAAGAGT...GGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp TCGCTAAAGGAACAGCGCCAGCCCGGTAGTACTCCACAGCACGATGCCTATGGCCCACAGATTCCTGGGTaGTTCTTTAGGAACCATTGG +
Preference number: 4 (lower is better)
Translates to: SLKEQRQPGSTPQHDAYGPQIPG*FFRNHW
Trigger: CCAATGGTTCCTAAAGAATCACCCAGGAATCTGTGG...GCCATAGGCATCGTGCTGTGGAGTACTACCGGGCTGGCGCTGTTCCTTTAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp GGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTTCACTGACTTCCCAATaGACCACTGCAGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GQHSRGKAWSQDASHRALSLTSQ*TTAAQV
Trigger: TACCTGGGCTGCAGTGGTTCATTGGGAAGTCAGTGA...AAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp TTGAAGCCTCCCAGTCCGGATCTAAGAACTTGGGGCAGGAAGGCAGCAGCTAGCGGCAGAGGGATTTGGTaGCCTGAAGTTGACTGCTTA +
Preference number: 4 (lower is better)
Translates to: LKPPSPDLRTWGRKAAASGRGIW*PEVDCL
Trigger: TAAGCAGTCAACTTCAGGTCACCAAATCCCTCTGCC...GCTAGCTGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp GAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTCCATCTCCCGATCCCTaGGTTGCTGAGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: EVLQEPSFQVEWRMWIPVPSPDP*VAEPGP
Trigger: TGGCCCTGGCTCAGCAACTCAGGGATCGGGAGATGG...AACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp GAGGTCAGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACTACGCAGGCTCTCCTTaGTGCAGGCGAGGGACCTTC +
Preference number: 4 (lower is better)
Translates to: EVRGYLRTRTCHSHLQNHYAGSP*CRRGTF
Trigger: GAAGGTCCCTCGCCTGCATCAAGGAGAGCCTGCGTA...GTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp AGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCAGCTCTGTCAGCTTGTTaGAGATCCGCAGCTCGGTTC +
Preference number: 4 (lower is better)
Translates to: SFQVEWRMWIPVGPLGFPALSAC*RSAARF
Trigger: GAACCGAGCTGCGGATCTTCAACAAGCTGACAGAGC...TGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp AGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACAGGGCTACAGTCGCCAGGCGGTaGAAAGCCACCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RGYLRTRTCHSHLQNHRATVARR*KATSSC
Trigger: ACAGGAGCTGGTGGCTTTTCACCGCCTGGCGACTGT...AGCCCTGTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp GATAACTTGAAGCCTCCCAGTCCGGATCTAAGAACTTGGGGCAGGAAGGCAGCACGGAGCACACGGCTCTaGAGAAGAAGTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: DNLKPPSPDLRTWGRKAARSTRL*RRSDLP
Trigger: AGGAAGGTCACTTCTTCTGCAGAGCCGTGTGCTCCG...TGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAAGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR GCA 90 bp GGAGCCAAGATGCCTCTCACAGAGCCCTTCTCCTTCTGGCCGTTGCTCTTCTCCAAGAATCAAGATCGATaGTCCTGGTGGGGACAAAGC +
Preference number: 4 (lower is better)
Translates to: GAKMPLTEPFSFWPLLFSKNQDR*SWWGQS
Trigger: GCTTTGTCCCCACCAGGAGCATCGATCTTGATTCTT...GGAGAAGAGCAACGGCCAGAAGGAGAAGGGCTCTGTGAGAGGCATCTTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp CAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGTGTCCAGAAAGGAGCTaGAGACGTTCTGCGAATGGC +
Preference number: 4 (lower is better)
Translates to: QEPSFQVEWRMWIPVGPLCPERS*RRSANG
Trigger: GCCATTCGCAGAACGTCTGCAGCTCCTTTCTGGACA...CAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp AGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCGAGGCCACTGCGAGATaGGGAAGATACTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RMENVDPSWTPGLSTWPFEATAR*GRYFLS
Trigger: TGACAAGAAGTATCTTCCGCATCTCGCAGTGGCCTC...GAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp TCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCAGTGAGGCCACTGCGAGATaGGGAAGATACTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SLRTLVRAPGQSAHTFPSEATAR*GRYFLS
Trigger: TGACAAGAAGTATCTTCCGCATCTCGCAGTGGCCTC...ACTGGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp TCGCTAAAGGAACAGCGCCAGCCCGGTAGTACTCCACAGCACGATGCCTATGGCTTGAACAGAGGCCACTaGGAGATGCGGAAGATACTT +
Preference number: 4 (lower is better)
Translates to: SLKEQRQPGSTPQHDAYGLNRGH*EMRKIL
Trigger: AAGTATCTTCCGCATCTCGCAGTGGCCTCTGTTCAA...GCCATAGGCATCGTGCTGTGGAGTACTACCGGGCTGGCGCTGTTCCTTTAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR GCA 90 bp CTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCCCATGTCTGTCTCCTTaGTGGCTTGGAGTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: LGNIPEAKHGAKMPLTEPPCLSP*WLGVRN
Trigger: ATTCCGAACTCCAAGCCAGCAAGGAGACAGACATGG...GGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp GGCAGGAAGGCAGCAGCTAGCCGTGGCAATGTGGTCAAGAAGGGGAAGGGTCTCCTGCTTAGGTGTTGGTaGCTTAAGCCAAACAGCAAT +
Preference number: 4 (lower is better)
Translates to: GRKAAASRGNVVKKGKGLLLRCW*LKPNSN
Trigger: ATTGCTGTTTGGCTTAAGGCACCAACACCTAAGCAG...GAGACCCTTCCCCTTCTTGACCACATTGCCACGGCTAGCTGCTGCCTTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp GCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTCCCTCGAGGCTTATCTaGAGCTCTGTCAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: AKLPGRMENVDPSWTPGLPSRLI*SSVSLL
Trigger: CAACAAGCTGACAGAGCTGCAGATAAGCCTCGAGGG...AAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp TTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCGAAGGGATTGCTGTaGCACAGGGGACTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LCTRVTVTWATFQRQSMEPKGLL*HRGLWQ
Trigger: CTGCCAGAGTCCCCTGTGGCACAGCAATCCCTTCGG...CTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GATAACTTGAAGCCTCCCAGTCCGGATCTAAGAACTTGGGGCAGGAAGGCAGCAGATCGATGCTCCTGGTaGGGACAAAGCCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: DNLKPPSPDLRTWGRKAADRCSW*GQSPLL
Trigger: GAGAAGTGGGCTTTGTCCCCACCAGGAGCATCGATC...TGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAAGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTCAAGATCGATGCTCCTaGTGGGGACAAAGCCCACTT +
Preference number: 4 (lower is better)
Translates to: AKLPGRMENVDPSWTPGLQDRCS*WGQSPL
Trigger: AAGTGGGCTTTGTCCCCACCAGGAGCATCGATCTTG...AAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCCTTCCTCTCACTTCCTaGGGACCAGAGAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: GNIPEAKHGAKMPLTEPFLPLTS*GPERTP
Trigger: AGGAGTTCTCTCTGGTCCCCAGGAAGTGAGAGGAAG...GAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCTTCCTCTCACTTCCTaGGGACCAGAGAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: GQHSRGKAWSQDASHRALLPLTS*GPERTP
Trigger: AGGAGTTCTCTCTGGTCCCCAGGAAGTGAGAGGAAG...AAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GGAGCCAAGATGCCTCTCACAGAGCCCTTCTCCTTCTGGCCGTTGCTCTTCTCCCTAGAAAAGCCAAGATaGGGGCAAAGTGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: GAKMPLTEPFSFWPLLFSLEKPR*GQSAPH
Trigger: ATGTGGAGCACTTTGCCCCCATCTTGGCTTTTCTAG...GGAGAAGAGCAACGGCCAGAAGGAGAAGGGCTCTGTGAGAGGCATCTTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTCATGTGGCTCATCTTaGCCCACTTCCTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: GRMENVDPSWTPGLSTWPSCGSS*PTSLKS
Trigger: AGACTTCAAGGAAGTGGGCCAAGATGAGCCACATGA...GGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTCCAGGAAGCAGGACCTaGCCTCCAGAAGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: EVLQEPSFQVEWRMWIPVPGSRT*PPEGHS
Trigger: GGAGTGGCCTTCTGGAGGCCAGGTCCTGCTTCCTGG...AACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp ACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTAGTAGGCCTGCCAAATaGAAAGAGACATCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: TGAKLPGRMENVDPSWTPSRPAK*KETSPG
Trigger: CCCGGGGGATGTCTCTTTCCATTTGGCAGGCCTACT...AGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTGGCCTGCCTGAGGGTTaGGCAGGCCAGGGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: RIASNYLLLKLHWKGICVGLPEG*AGQGGN
Trigger: GTTTCCGCCCTGGCCTGCCCAACCCTCAGGCAGGCC...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp TTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGAGTCCCAGGAGGTTGTaGACCACTCCCCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LCTRVTVTWATFQRQSMESPRRL*TTPLWV
Trigger: GACCCAGAGGGGAGTGGTCCACAACCTCCTGGGACT...CTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GCCTTAGCCTGCGTAAGCTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTACCAGACACCGAAGCTTaGCCCAACCAGAGTAACACC +
Preference number: 4 (lower is better)
Translates to: ALACVSFWEVLQEPSFQVPDTEA*PNQSNT
Trigger: GGTGTTACTCTGGTTGGGCCAAGCTTCGGTGTCTGG...TACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAGCTTACGCAGGCTAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TTGGAGCTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCACGGCTGTGGACCAGCTaGTGTCCAGACACCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LELFVYKSHSDLGNIPEARLWTS*CPDTEA
Trigger: AGCTTCGGTGTCTGGACACCAGCTGGTCCACAGCCG...TGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAGCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp AGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCCGAGTGCTTAGGTGTTaGTGCCTTAAGCCAAACAGC +
Preference number: 4 (lower is better)
Translates to: RMENVDPSWTPGLSTWPFRVLRC*CLKPNS
Trigger: GCTGTTTGGCTTAAGGCACCAACACCTAAGCACTCG...GAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp GAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACAGGGCTCTGGTGCTCAGGTCCATaGACAGTTCCGGGTCATCGA +
Preference number: 4 (lower is better)
Translates to: EATLGPGHVIPTFKITGLWCSGP*TVPGHR
Trigger: TCGATGACCCGGAACTGTTCATGGACCTGAGCACCA...GAGCCCTGTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp GTCTGGATGGCCTCCTGCAAATACAGTTCTACCAGCTCATCTTCCTGCATGAGGTGGGGACCACGTTTTTaGACAGAGGCCACTGCGAGA +
Preference number: 4 (lower is better)
Translates to: VWMASCKYSSTSSSSCMRWGPRF*TEATAR
Trigger: TCTCGCAGTGGCCTCTGTTCAAAAACGTGGTCCCCA...CCTCATGCAGGAAGATGAGCTGGTAGAACTGTATTTGCAGGAGGCCATCCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp GTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGGACTTGAGGGTCAAGTaGCCAAGATTGGCCATAGAC +
Preference number: 4 (lower is better)
Translates to: VTWATFQRQSMEPRCLSQDLRVK*PRLAID
Trigger: GTCTATGGCCAATCTTGGTCACTTGACCCTCAAGTC...CTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp TCAGGTAGCAGTCTTCAGCCATCTCATACATGTTCAGAGAGAAGTACACAGTCGCCATCTCCCGATCCCTaGGTTGCTGAGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SGSSLQPSHTCSERSTQSPSPDP*VAEPGP
Trigger: TGGCCCTGGCTCAGCAACTCAGGGATCGGGAGATGG...CGACTGTGTACTTCTCTCTGAACATGTATGAGATGGCTGAAGACTGCTACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp CCCAGCAGTTCCCATGAGCACCAAGTGCTGACTTCTTTTGGTTTTGAAGAAAGCTACGCAGGCTCTCCTTaGTGCAGGCGAGGGACCTTC +
Preference number: 4 (lower is better)
Translates to: PSSSHEHQVLTSFGFEESYAGSP*CRRGTF
Trigger: GAAGGTCCCTCGCCTGCATCAAGGAGAGCCTGCGTA...GCTTTCTTCAAAACCAAAAGAAGTCAGCACTTGGTGCTCATGGGAACTGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp AGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCAAGAATCAAGATCGATaGTCCTGGTGGGGACAAAGC +
Preference number: 4 (lower is better)
Translates to: RMENVDPSWTPGLSTWPFKNQDR*SWWGQS
Trigger: GCTTTGTCCCCACCAGGAGCATCGATCTTGATTCTT...GAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp GGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCCTCAGGTAGATAGCTaGCAAGTTGATGTACAGAGC +
Preference number: 4 (lower is better)
Translates to: GAKLPGRMENVDPSWTPGPQVDS*QVDVQS
Trigger: GCTCTGTACATCAACTTGGCAGCTATCTACCTGAGG...CCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp TCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCAGTCCATCAGGAGATTGGTaGTGGAGGTACATCTTAGAC +
Preference number: 4 (lower is better)
Translates to: SLRTLVRAPGQSAHTFPSPSGDW*WRYILD
Trigger: GTCTAAGATGTACCTCCAGCACCAATCTCCTGATGG...ACTGGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GGAGCCAAGATGCCTCTCACAGAGCCCTTCTCCTTCTGGCCGTTGCTCTTCTCCATCCAGGTGGATCCTTaGAAGAACCTTCTTTACCTG +
Preference number: 4 (lower is better)
Translates to: GAKMPLTEPFSFWPLLFSIQVDP*KNLLYL
Trigger: CAGGTAAAGAAGGTTCTTCCAAGGATCCACCTGGAT...GGAGAAGAGCAACGGCCAGAAGGAGAAGGGCTCTGTGAGAGGCATCTTGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATAGCGCGTGGACTTCCTaGGCTTCATTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LFVYKSHSDLGNIPEAKHSAWTS*ASFSRA
Trigger: GGCCCTGGAGAATGAAGCCCAGGAAGTCCACGCGCT...ATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATAGCGCGTGGACTTCCTaGGCTTCATTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDSAWTS*ASFSRA
Trigger: GGCCCTGGAGAATGAAGCCCAGGAAGTCCACGCGCT...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp TCAAGAAGGGGAAGGGTCTCTTCAGAGGGCCAGGCTCCCACCACTGAGCCACCGGATGTTCCAGACATATaGACACATAGCCTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SRRGRVSSEGQAPTTEPPDVPDI*THSLSS
Trigger: TGAACTTAGGCTATGTGTCCATATGTCTGGAACATC...CGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTGAAGAGACCCTTCCCCTTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp TTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGTCCTTCCTTGTCAGCTaGCTGAGCCACGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: LCTRVTVTWATFQRQSMESFLVS*LSHGAH
Trigger: GTGTGCTCCGTGGCTCAGCCAGCTGACAAGGAAGGA...CTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp ACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTTCCAGTCTCTCTTCCTaGGAAGGCCACAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: TGAKLPGRMENVDPSWTPSSLSS*EGHRFL
Trigger: CAGGAATCTGTGGCCTTCCCAGGAAGAGAGACTGGA...AGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCTCCAAGATCGATGCTCCTaGTGGGGACAAAGCCCACTT +
Preference number: 4 (lower is better)
Translates to: QHSRGKAWSQDASHRALLQDRCS*WGQSPL
Trigger: AAGTGGGCTTTGTCCCCACCAGGAGCATCGATCTTG...GAGAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TCTTCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCTCTGGAGATTCTGGATaGCTTCAAACTCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSLRTLVRAPGQSAHTFPSGDSG*LQTHSA
Trigger: GGCTGAGTGAGTTTGAAGCCATCCAGAATCTCCAGA...GGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGTCTGGAGATTCTGGATaGCTTCAAACTCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: WRMWIPVGPLGFPPGPSKSGDSG*LQTHSA
Trigger: GGCTGAGTGAGTTTGAAGCCATCCAGAATCTCCAGA...CTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGCCTCAAAGTAGACCCTaGCCTGAGAAAGTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: WRMWIPVGPLGFPPGPSKPQSRP*PEKVWS
Trigger: AGACCAAACTTTCTCAGGCCAGGGTCTACTTTGAGG...CTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp CCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCTCAAAGTAGACCCTaGCCTGAGAAAGTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PGRMENVDPSWTPGLSTWPQSRP*PEKVWS
Trigger: AGACCAAACTTTCTCAGGCCAGGGTCTACTTTGAGG...CCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp CTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCCCTCAAAGTAGACCCTaGCCTGAGAAAGTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LGNIPEAKHGAKMPLTEPPQSRP*PEKVWS
Trigger: AGACCAAACTTTCTCAGGCCAGGGTCTACTTTGAGG...GGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TATGTGTGCTGGGAACTGAACTTAGGTCCTCTGCAAGAGGAACAAGAGCTCTTACCAGGAAGCAGGACCTaGCCTCCAGAAGGCCACTCC +
Preference number: 4 (lower is better)
Translates to: YVCWELNLGPLQEEQELLPGSRT*PPEGHS
Trigger: GGAGTGGCCTTCTGGAGGCCAGGTCCTGCTTCCTGG...TAAGAGCTCTTGTTCCTCTTGCAGAGGACCTAAGTTCAGTTCCCAGCACACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCGGCTGTGGACCAGCTaGTGTCCAGACACCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDRLWTS*CPDTEA
Trigger: AGCTTCGGTGTCTGGACACCAGCTGGTCCACAGCCG...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp AGTCTCCAAATGCTGTCCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCCGGCTGTGGACCAGCTaGTGTCCAGACACCGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLQMLSTKRHTRPKASPSRLWTS*CPDTEA
Trigger: AGCTTCGGTGTCTGGACACCAGCTGGTCCACAGCCG...GGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGGACAGCATTTGGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp CTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATCGGCTGTGGACCAGCTaGTGTCCAGACACCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LFVYKSHSDLGNIPEAKHRLWTS*CPDTEA
Trigger: AGCTTCGGTGTCTGGACACCAGCTGGTCCACAGCCG...ATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GATAACTTGAAGCCTCCCAGTCCGGATCTAAGAACTTGGGGCAGGAAGGCAGCAGGCGACAATAGACCTTaGCATAGTACAGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: DNLKPPSPDLRTWGRKAAGDNRP*HSTAPP
Trigger: AGGAGGCGCTGTACTATGCCAAGGTCTATTGTCGCC...TGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAAGTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp CAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCTCACTCTTCACACAGAATaGGAGCACCAGGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QHSRGKAWSQDASHRALLTLHTE*EHQVLG
Trigger: ACCCAAGACCTGGTGCTCTCATTCTGTGTGAAGAGT...GAGAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp CCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCTCACAAGAGGCCTCCCAAAGTTTGGTCTTCCTaGTGCTTAGTCGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPKDIQDQKPALPHKRPPKVWSS*CLVGPG
Trigger: TCCTGGGCCGACTAAGCATCAGGAAGACCAAACTTT...GGGAGGCCTCTTGTGAGGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp AAAAGACACCACTGCCCCCTGCTGGATGTCTTGATATCCTCAGAGAATTGCCAGAAGGGAGGGCTCTTCTaGCCTCAAGGCTGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: KRHHCPLLDVLISSENCQKGGLF*PQGCLD
Trigger: ATCCAGACAGCCTTGAGGTCAGAAGAGCCCTCCCTT...CTGGCAATTCTCTGAGGATATCAAGACATCCAGCAGGGGGCAGTGGTGTCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp TTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGGCTCTGTCAGCTTGTTaGAGATCCGCAGCTCGGTTC +
Preference number: 4 (lower is better)
Translates to: LCTRVTVTWATFQRQSMEALSAC*RSAARF
Trigger: GAACCGAGCTGCGGATCTTCAACAAGCTGACAGAGC...CTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTGGCACAACTTCCTCGTaGCGGCCAAGGCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RIASNYLLLKLHWKGICVGTTSS*RPRLRS
Trigger: GCTCCTGAGCCTTGGCCGGCACGAGGAAGTTGTGCC...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp GATAACTTGAAGCCTCCCAGTCCGGATCTAAGAACTTGGGGCAGGAAGGCAGCACCATGTCTGTCTCCTTaGTGGCTTGGAGTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: DNLKPPSPDLRTWGRKAAPCLSP*WLGVRN
Trigger: ATTCCGAACTCCAAGCCAGCAAGGAGACAGACATGG...TGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAAGTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp CTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCCTGCTTAGGTGTTGGTaGCTTAAGCCAAACAGCAAT +
Preference number: 4 (lower is better)
Translates to: LGNIPEAKHGAKMPLTEPLLRCW*LKPNSN
Trigger: ATTGCTGTTTGGCTTAAGGCACCAACACCTAAGCAG...GGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATAGCACCCGAAGGGATTaGTGTGCCACAGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDSTRRD*CATGDS
Trigger: AGAGTCCCCTGTGGCACAGCAATCCCTTCGGGTGCT...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TCAGAGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGAGCGCGTGGACTTCCTaGGCTTCATTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SENCQQLSSFEAPLEGDLSAWTS*ASFSRA
Trigger: GGCCCTGGAGAATGAAGCCCAGGAAGTCCACGCGCT...CAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp ACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTAAGGTGATGAGGAACTaGTCCTTCTGGGACTGGACA +
Preference number: 4 (lower is better)
Translates to: TGAKLPGRMENVDPSWTPKVMRN*SFWDWT
Trigger: TGTCCAGTCCCAGAAGGACCAGTTCCTCATCACCTT...AGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp TTCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCAGTTGAGCCAGTACGTGTaGTCAAAGAAGAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: FPENTGEGTRTVCSHFPQLSQYV*SKKRCS
Trigger: GGAACATCTCTTCTTTGACCACACGTACTGGCTCAA...CTGGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp GAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACAGGGCTCTCCAGTCTCTCTTCCTaGGAAGGCCACAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: EATLGPGHVIPTFKITGLSSLSS*EGHRFL
Trigger: CAGGAATCTGTGGCCTTCCCAGGAAGAGAGACTGGA...GAGCCCTGTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp TTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGGATCGATGCTCCTGGTaGGGACAAAGCCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: LCTRVTVTWATFQRQSMEDRCSW*GQSPLL
Trigger: GAGAAGTGGGCTTTGTCCCCACCAGGAGCATCGATC...CTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCTCTGGAGATTCTGGATaGCTTCAAACTCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: GNIPEAKHGAKMPLTEPFSGDSG*LQTHSA
Trigger: GGCTGAGTGAGTTTGAAGCCATCCAGAATCTCCAGA...GAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp AGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACAGGGCTAGTAGGCCTGCCAAATaGAAAGAGACATCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RGYLRTRTCHSHLQNHRASRPAK*KETSPG
Trigger: CCCGGGGGATGTCTCTTTCCATTTGGCAGGCCTACT...AGCCCTGTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp GAGGTCAGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACCCAGACACCGAAGCTTaGCCCAACCAGAGTAACACC +
Preference number: 4 (lower is better)
Translates to: EVRGYLRTRTCHSHLQNHPDTEA*PNQSNT
Trigger: GGTGTTACTCTGGTTGGGCCAAGCTTCGGTGTCTGG...GTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCTGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp TTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGTCACTGACTTCCCAATaGACCACTGCAGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LCTRVTVTWATFQRQSMESLTSQ*TTAAQV
Trigger: TACCTGGGCTGCAGTGGTTCATTGGGAAGTCAGTGA...CTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp AAAAGACACCACTGCCCCCTGCTGGATGTCTTGATATCCTCAGAGAATTGCCAGTCACTGACTTCCCAATaGACCACTGCAGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: KRHHCPLLDVLISSENCQSLTSQ*TTAAQV
Trigger: TACCTGGGCTGCAGTGGTTCATTGGGAAGTCAGTGA...CTGGCAATTCTCTGAGGATATCAAGACATCCAGCAGGGGGCAGTGGTGTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp GAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTAAGGGAGGGCTCTTCTaGCCTCAAGGCTGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: EVLQEPSFQVEWRMWIPVKGGLF*PQGCLD
Trigger: ATCCAGACAGCCTTGAGGTCAGAAGAGCCCTCCCTT...AACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp CTCCAAATGCTGTCCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCTCAGCTCTGTCAGCTTGTTaGAGATCCGCAGCTCGGTTC +
Preference number: 4 (lower is better)
Translates to: LQMLSTKRHTRPKASPSSALSAC*RSAARF
Trigger: GAACCGAGCTGCGGATCTTCAACAAGCTGACAGAGC...TGAGGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGGACAGCATTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp CAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCAGATCAGCTCATTCTTaGACAGTGTCAAATATTCTC +
Preference number: 4 (lower is better)
Translates to: QLDPWAFHLALLRLSLLSRSAHS*TVSNIL
Trigger: GAGAATATTTGACACTGTGCAAGAATGAGCTGATCT...GCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR GCA 90 bp ACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTAAGAATCAAGATCGATaGTCCTGGTGGGGACAAAGC +
Preference number: 4 (lower is better)
Translates to: TGAKLPGRMENVDPSWTPKNQDR*SWWGQS
Trigger: GCTTTGTCCCCACCAGGAGCATCGATCTTGATTCTT...AGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp GCCTTAGCCTGCGTAAGCTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTACCTCAGGTAGATAGCTaGCAAGTTGATGTACAGAGC +
Preference number: 4 (lower is better)
Translates to: ALACVSFWEVLQEPSFQVPQVDS*QVDVQS
Trigger: GCTCTGTACATCAACTTGGCAGCTATCTACCTGAGG...TACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAGCTTACGCAGGCTAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp AGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCATCAGGAGATTGGTaGTGGAGGTACATCTTAGAC +
Preference number: 4 (lower is better)
Translates to: SFQVEWRMWIPVGPLGFPPSGDW*WRYILD
Trigger: GTCTAAGATGTACCTCCAGCACCAATCTCCTGATGG...TGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp GAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACAGGGCTCCCATGTCTGTCTCCTTaGTGGCTTGGAGTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: EATLGPGHVIPTFKITGLPCLSP*WLGVRN
Trigger: ATTCCGAACTCCAAGCCAGCAAGGAGACAGACATGG...GAGCCCTGTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp GAGGTCAGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACCCCTCGAGGCTTATCTaGAGCTCTGTCAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: EVRGYLRTRTCHSHLQNHPSRLI*SSVSLL
Trigger: CAACAAGCTGACAGAGCTGCAGATAAGCCTCGAGGG...GTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp ACAAGAGCTCTTAGCCACGGAGCCCTATCTGCAGATTCATACTGTATGTTTTTAGCCTCCTTGGGACTCTaGAGCCATGGTGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: TRALSHGALSADSYCMFLASLGL*SHGGHR
Trigger: CCTGTGCCCACCATGGCTGCAGAGTCCCAAGGAGGC...TAAAAACATACAGTATGAATCTGCAGATAGGGCTCCGTGGCTAAGAGCTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp GAGGTCAGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACGAGAGCACCAGGTCTTaGGTCATATTCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: EVRGYLRTRTCHSHLQNHESTRS*VIFCGR
Trigger: CCTGCCACAGAATATGACCCAAGACCTGGTGCTCTC...GTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp GGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCTTGAGCCAGTACGTGTaGTCAAAGAAGAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: GNIPEAKHGAKMPLTEPFLSQYV*SKKRCS
Trigger: GGAACATCTCTTCTTTGACCACACGTACTGGCTCAA...GAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp GCCTTAGCCTGCGTAAGCTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTATTCTTTAGGAACCATTaGTGGAAAGGGACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ALACVSFWEVLQEPSFQVFFRNH*WKGTGR
Trigger: CCTGCCTGTCCCTTTCCACCAATGGTTCCTAAAGAA...TACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAGCTTACGCAGGCTAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp AAAAGACACCACTGCCCCCTGCTGGATGTCTTGATATCCTCAGAGAATTGCCAGCTTCCTCTCACTTCCTaGGGACCAGAGAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: KRHHCPLLDVLISSENCQLPLTS*GPERTP
Trigger: AGGAGTTCTCTCTGGTCCCCAGGAAGTGAGAGGAAG...CTGGCAATTCTCTGAGGATATCAAGACATCCAGCAGGGGGCAGTGGTGTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp CAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGCACTCAGATCATTCTaGAGATTCTGGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: QEPSFQVEWRMWIPVGPLALRSF*RFWMAS
Trigger: TGAAGCCATCCAGAATCTCCAGAATGATCTGAGTGC...CAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp CAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCTCCTAGAAAAGCCAAGATaGGGGCAAAGTGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: QHSRGKAWSQDASHRALLLEKPR*GQSAPH
Trigger: ATGTGGAGCACTTTGCCCCCATCTTGGCTTTTCTAG...GAGAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp ACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTCTAGAAAAGCCAAGATaGGGGCAAAGTGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: TGAKLPGRMENVDPSWTPLEKPR*GQSAPH
Trigger: ATGTGGAGCACTTTGCCCCCATCTTGGCTTTTCTAG...AGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATTGGGCCCATGTCATGTaGCTCATCTTGGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDWAHVM*LILAHF
Trigger: GAAGTGGGCCAAGATGAGCCACATGACATGGGCCCA...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp AAAAGACACCACTGCCCCCTGCTGGATGTCTTGATATCCTCAGAGAATTGCCAGGCAGGAGATAACCCCTaGCTGACTGCTGCATACATG +
Preference number: 4 (lower is better)
Translates to: KRHHCPLLDVLISSENCQAGDNP*LTAAYM
Trigger: CATGTATGCAGCAGTCAGCCAGGGGTTATCTCCTGC...CTGGCAATTCTCTGAGGATATCAAGACATCCAGCAGGGGGCAGTGGTGTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp GAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGTCTCCTTGCTGGCTTaGAGTTCGGAATACAGCCGG +
Preference number: 4 (lower is better)
Translates to: EVLQEPSFQVEWRMWIPVVSLLA*SSEYSR
Trigger: CCGGCTGTATTCCGAACTCCAAGCCAGCAAGGAGAC...AACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp CCCAGCAGTTCCCATGAGCACCAAGTGCTGACTTCTTTTGGTTTTGAAGAAAGCGTCTCCTTGCTGGCTTaGAGTTCGGAATACAGCCGG +
Preference number: 4 (lower is better)
Translates to: PSSSHEHQVLTSFGFEESVSLLA*SSEYSR
Trigger: CCGGCTGTATTCCGAACTCCAAGCCAGCAAGGAGAC...GCTTTCTTCAAAACCAAAAGAAGTCAGCACTTGGTGCTCATGGGAACTGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GATAACTTGAAGCCTCCCAGTCCGGATCTAAGAACTTGGGGCAGGAAGGCAGCATCAAGGCTGTCTGGATaGCCTCCTGCAAATACAGTT +
Preference number: 4 (lower is better)
Translates to: DNLKPPSPDLRTWGRKAASRLSG*PPANTV
Trigger: AACTGTATTTGCAGGAGGCCATCCAGACAGCCTTGA...TGCTGCCTTCCTGCCCCAAGTTCTTAGATCCGGACTGGGAGGCTTCAAGTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TATGTGTGCTGGGAACTGAACTTAGGTCCTCTGCAAGAGGAACAAGAGCTCTTAAGTACAGCGCCTCCTTaGGACTCTGCAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: YVCWELNLGPLQEEQELLSTAPP*DSAAMV
Trigger: CACCATGGCTGCAGAGTCCCAAGGAGGCGCTGTACT...TAAGAGCTCTTGTTCCTCTTGCAGAGGACCTAAGTTCAGTTCCCAGCACACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp AAAAGACACCACTGCCCCCTGCTGGATGTCTTGATATCCTCAGAGAATTGCCAGGGCGACAATAGACCTTaGCATAGTACAGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KRHHCPLLDVLISSENCQGDNRP*HSTAPP
Trigger: AGGAGGCGCTGTACTATGCCAAGGTCTATTGTCGCC...CTGGCAATTCTCTGAGGATATCAAGACATCCAGCAGGGGGCAGTGGTGTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTCCACCAGCCTGCTGTTaGGCCAGTACGTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: RIASNYLLLKLHWKGICVPPACC*ASTCGQ
Trigger: TTGACCACACGTACTGGCTCAACAGCAGGCTGGTGG...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp CCCAGCAGTTCCCATGAGCACCAAGTGCTGACTTCTTTTGGTTTTGAAGAAAGCTGTCCAGAAAGGAGCTaGAGACGTTCTGCGAATGGC +
Preference number: 4 (lower is better)
Translates to: PSSSHEHQVLTSFGFEESCPERS*RRSANG
Trigger: GCCATTCGCAGAACGTCTGCAGCTCCTTTCTGGACA...GCTTTCTTCAAAACCAAAAGAAGTCAGCACTTGGTGCTCATGGGAACTGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp CTCCAAATGCTGTCCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCTCATGTCCAGAAAGGAGCTaGAGACGTTCTGCGAATGGC +
Preference number: 4 (lower is better)
Translates to: LQMLSTKRHTRPKASPSSCPERS*RRSANG
Trigger: GCCATTCGCAGAACGTCTGCAGCTCCTTTCTGGACA...TGAGGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGGACAGCATTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp TTGGAGCTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAGAGGCCACTGCGAGATaGGGAAGATACTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LELFVYKSHSDLGNIPEAEATAR*GRYFLS
Trigger: TGACAAGAAGTATCTTCCGCATCTCGCAGTGGCCTC...TGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAGCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp TTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCATGTCTGTCTCCTTaGTGGCTTGGAGTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: LCTRVTVTWATFQRQSMEPCLSP*WLGVRN
Trigger: ATTCCGAACTCCAAGCCAGCAAGGAGACAGACATGG...CTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATTGGTCCTTCTGGGACTaGACACTCACCAACCTTGCA +
Preference number: 4 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDWSFWD*TLTNLA
Trigger: TGCAAGGTTGGTGAGTGTCCAGTCCCAGAAGGACCA...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATAGGAACTGGTCCTTCTaGGACTGGACACTCACCAAC +
Preference number: 4 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDRNWSF*DWTLTN
Trigger: GTTGGTGAGTGTCCAGTCCCAGAAGGACCAGTTCCT...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTTCCTTCCTTGTCAGCTaGCTGAGCCACGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: RIASNYLLLKLHWKGICVSFLVS*LSHGAH
Trigger: GTGTGCTCCGTGGCTCAGCCAGCTGACAAGGAAGGA...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp CAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCTCTCAATGCTTTCACCCTaGAGGAAACACAGTTCGTCT +
Preference number: 4 (lower is better)
Translates to: QHSRGKAWSQDASHRALLSMLSP*RKHSSS
Trigger: AGACGAACTGTGTTTCCTCCAGGGTGAAAGCATTGA...GAGAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp GCCTTAGCCTGCGTAAGCTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGCACTCAGATCATTCTaGAGATTCTGGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ALACVSFWEVLQEPSFQVALRSF*RFWMAS
Trigger: TGAAGCCATCCAGAATCTCCAGAATGATCTGAGTGC...TACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAGCTTACGCAGGCTAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGCAGGAGATAACCCCTaGCTGACTGCTGCATACATG +
Preference number: 4 (lower is better)
Translates to: EVLQEPSFQVEWRMWIPVAGDNP*LTAAYM
Trigger: CATGTATGCAGCAGTCAGCCAGGGGTTATCTCCTGC...AACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGTCAAGGCTGTCTGGATaGCCTCCTGCAAATACAGTT +
Preference number: 4 (lower is better)
Translates to: YKSHSDLGNIPEAKHGAKSRLSG*PPANTV
Trigger: AACTGTATTTGCAGGAGGCCATCCAGACAGCCTTGA...CTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp CTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGCGACAATAGACCTTaGCATAGTACAGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFVYKSHSDLGNIPEAKHGDNRP*HSTAPP
Trigger: AGGAGGCGCTGTACTATGCCAAGGTCTATTGTCGCC...ATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp TTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCACAGATTCCTGGGTaGTTCTTTAGGAACCATTGG +
Preference number: 4 (lower is better)
Translates to: LCTRVTVTWATFQRQSMEPQIPG*FFRNHW
Trigger: CCAATGGTTCCTAAAGAATCACCCAGGAATCTGTGG...CTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp GAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTAAAGTTTGGTCTTCCTaGTGCTTAGTCGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: EVLQEPSFQVEWRMWIPVKVWSS*CLVGPG
Trigger: TCCTGGGCCGACTAAGCATCAGGAAGACCAAACTTT...AACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp CTCCAAATGCTGTCCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCTCAGACTTGAGGGTCAAGTaGCCAAGATTGGCCATAGAC +
Preference number: 4 (lower is better)
Translates to: LQMLSTKRHTRPKASPSSDLRVK*PRLAID
Trigger: GTCTATGGCCAATCTTGGTCACTTGACCCTCAAGTC...TGAGGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGGACAGCATTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp CCCAGCAGTTCCCATGAGCACCAAGTGCTGACTTCTTTTGGTTTTGAAGAAAGCGGCAGAGGGATTTGGTaGCCTGAAGTTGACTGCTTA +
Preference number: 4 (lower is better)
Translates to: PSSSHEHQVLTSFGFEESGRGIW*PEVDCL
Trigger: TAAGCAGTCAACTTCAGGTCACCAAATCCCTCTGCC...GCTTTCTTCAAAACCAAAAGAAGTCAGCACTTGGTGCTCATGGGAACTGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR TCA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTACCAGCTCCTGTTTCTaGTCTCCCGTGAGGACACTC +
Preference number: 4 (lower is better)
Translates to: RIASNYLLLKLHWKGICVTSSCF*SPVRTL
Trigger: GAGTGTCCTCACGGGAGATCAGAAACAGGAGCTGGT...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp CGCGTAGCATCCACACAGTGTCAACTGTCATTGTTCACATACTTTAGTCTCCAACGGAGCACACGGCTCTaGAGAAGAAGTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: RVASTQCQLSLFTYFSLQRSTRL*RRSDLP
Trigger: AGGAAGGTCACTTCTTCTGCAGAGCCGTGTGCTCCG...TTGGAGACTAAAGTATGTGAACAATGACAGTTGACACTGTGTGGATGCTACGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp TTGGAGCTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCACCTCAGGTAGATAGCTaGCAAGTTGATGTACAGAGC +
Preference number: 4 (lower is better)
Translates to: LELFVYKSHSDLGNIPEAPQVDS*QVDVQS
Trigger: GCTCTGTACATCAACTTGGCAGCTATCTACCTGAGG...TGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAGCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR GCA 90 bp GAGGTCAGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACTTGAACAGAGGCCACTaGGAGATGCGGAAGATACTT +
Preference number: 4 (lower is better)
Translates to: EVRGYLRTRTCHSHLQNHLNRGH*EMRKIL
Trigger: AAGTATCTTCCGCATCTCGCAGTGGCCTCTGTTCAA...GTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCTGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp TTGGAGCTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCATTGAACAGAGGCCACTaGGAGATGCGGAAGATACTT +
Preference number: 4 (lower is better)
Translates to: LELFVYKSHSDLGNIPEALNRGH*EMRKIL
Trigger: AAGTATCTTCCGCATCTCGCAGTGGCCTCTGTTCAA...TGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAGCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp CTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTGGGTCATATTCTGTaGCAGGAAACATTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LGNIPEAKHGAKMPLTEPLGHIL*QETFSL
Trigger: AAGAGAAAATGTTTCCTGCCACAGAATATGACCCAA...GGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp TCAGGTAGCAGTCTTCAGCCATCTCATACATGTTCAGAGAGAAGTACACAGTCGTGGTCCTTCTGGGACTaGACACTCACCAACCTTGCA +
Preference number: 4 (lower is better)
Translates to: SGSSLQPSHTCSERSTQSWSFWD*TLTNLA
Trigger: TGCAAGGTTGGTGAGTGTCCAGTCCCAGAAGGACCA...CGACTGTGTACTTCTCTCTGAACATGTATGAGATGGCTGAAGACTGCTACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp TCAGAGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGGTCCTTCTGGGACTaGACACTCACCAACCTTGCA +
Preference number: 4 (lower is better)
Translates to: SENCQQLSSFEAPLEGDLWSFWD*TLTNLA
Trigger: TGCAAGGTTGGTGAGTGTCCAGTCCCAGAAGGACCA...CAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp TCAGAGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGAGGAACTGGTCCTTCTaGGACTGGACACTCACCAAC +
Preference number: 4 (lower is better)
Translates to: SENCQQLSSFEAPLEGDLRNWSF*DWTLTN
Trigger: GTTGGTGAGTGTCCAGTCCCAGAAGGACCAGTTCCT...CAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp AGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACAGGGCTTTCTTTAGGAACCATTaGTGGAAAGGGACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGYLRTRTCHSHLQNHRAFFRNH*WKGTGR
Trigger: CCTGCCTGTCCCTTTCCACCAATGGTTCCTAAAGAA...AGCCCTGTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTGATCGATGCTCCTGGTaGGGACAAAGCCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: RIASNYLLLKLHWKGICVDRCSW*GQSPLL
Trigger: GAGAAGTGGGCTTTGTCCCCACCAGGAGCATCGATC...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp TATGTGTGCTGGGAACTGAACTTAGGTCCTCTGCAAGAGGAACAAGAGCTCTTACAAGATCGATGCTCCTaGTGGGGACAAAGCCCACTT +
Preference number: 4 (lower is better)
Translates to: YVCWELNLGPLQEEQELLQDRCS*WGQSPL
Trigger: AAGTGGGCTTTGTCCCCACCAGGAGCATCGATCTTG...TAAGAGCTCTTGTTCCTCTTGCAGAGGACCTAAGTTCAGTTCCCAGCACACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp AGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACAGGGCTTCTGGAGATTCTGGATaGCTTCAAACTCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: RGYLRTRTCHSHLQNHRASGDSG*LQTHSA
Trigger: GGCTGAGTGAGTTTGAAGCCATCCAGAATCTCCAGA...AGCCCTGTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp TACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGGCACTCAGATCATTCTaGAGATTCTGGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: YKSHSDLGNIPEAKHGAKALRSF*RFWMAS
Trigger: TGAAGCCATCCAGAATCTCCAGAATGATCTGAGTGC...CTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp GAGGTCAGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACTCATGTGGCTCATCTTaGCCCACTTCCTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: EVRGYLRTRTCHSHLQNHSCGSS*PTSLKS
Trigger: AGACTTCAAGGAAGTGGGCCAAGATGAGCCACATGA...GTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCTGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTGTCTCCTTGCTGGCTTaGAGTTCGGAATACAGCCGG +
Preference number: 4 (lower is better)
Translates to: RIASNYLLLKLHWKGICVVSLLA*SSEYSR
Trigger: CCGGCTGTATTCCGAACTCCAAGCCAGCAAGGAGAC...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp GAGGTCAGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACTCAAGGCTGTCTGGATaGCCTCCTGCAAATACAGTT +
Preference number: 4 (lower is better)
Translates to: EVRGYLRTRTCHSHLQNHSRLSG*PPANTV
Trigger: AACTGTATTTGCAGGAGGCCATCCAGACAGCCTTGA...GTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCTGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp AGTCTCCAAATGCTGTCCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCCCACAGATTCCTGGGTaGTTCTTTAGGAACCATTGG +
Preference number: 4 (lower is better)
Translates to: SLQMLSTKRHTRPKASPSPQIPG*FFRNHW
Trigger: CCAATGGTTCCTAAAGAATCACCCAGGAATCTGTGG...GGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGGACAGCATTTGGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp TCAGGTAGCAGTCTTCAGCCATCTCATACATGTTCAGAGAGAAGTACACAGTCGAAAGTTTGGTCTTCCTaGTGCTTAGTCGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SGSSLQPSHTCSERSTQSKVWSS*CLVGPG
Trigger: TCCTGGGCCGACTAAGCATCAGGAAGACCAAACTTT...CGACTGTGTACTTCTCTCTGAACATGTATGAGATGGCTGAAGACTGCTACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR TCA 90 bp ACAAGAGCTCTTAGCCACGGAGCCCTATCTGCAGATTCATACTGTATGTTTTTATGGGGACCACGTTTTTaGACAGAGGCCACTGCGAGA +
Preference number: 4 (lower is better)
Translates to: TRALSHGALSADSYCMFLWGPRF*TEATAR
Trigger: TCTCGCAGTGGCCTCTGTTCAAAAACGTGGTCCCCA...TAAAAACATACAGTATGAATCTGCAGATAGGGCTCCGTGGCTAAGAGCTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp TCAGAGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGGGCAGAGGGATTTGGTaGCCTGAAGTTGACTGCTTA +
Preference number: 4 (lower is better)
Translates to: SENCQQLSSFEAPLEGDLGRGIW*PEVDCL
Trigger: TAAGCAGTCAACTTCAGGTCACCAAATCCCTCTGCC...CAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp GAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTTTGAACAGAGGCCACTaGGAGATGCGGAAGATACTT +
Preference number: 4 (lower is better)
Translates to: EVLQEPSFQVEWRMWIPVLNRGH*EMRKIL
Trigger: AAGTATCTTCCGCATCTCGCAGTGGCCTCTGTTCAA...AACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp TTGGAGCTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAATCCAGGTGGATCCTTaGAAGAACCTTCTTTACCTG +
Preference number: 4 (lower is better)
Translates to: LELFVYKSHSDLGNIPEAIQVDP*KNLLYL
Trigger: CAGGTAAAGAAGGTTCTTCCAAGGATCCACCTGGAT...TGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAGCTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp GCCTTAGCCTGCGTAAGCTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTACTAAGTTCAGGTACGTaGAAAACTTCCAGATTTCCT +
Preference number: 4 (lower is better)
Translates to: ALACVSFWEVLQEPSFQVLSSGT*KTSRFP
Trigger: AGGAAATCTGGAAGTTTTCCACGTACCTGAACTTAG...TACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAGCTTACGCAGGCTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATTTCTTTAGGAACCATTaGTGGAAAGGGACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LFVYKSHSDLGNIPEAKHFFRNH*WKGTGR
Trigger: CCTGCCTGTCCCTTTCCACCAATGGTTCCTAAAGAA...ATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp TTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGTCAATGCTTTCACCCTaGAGGAAACACAGTTCGTCT +
Preference number: 4 (lower is better)
Translates to: LCTRVTVTWATFQRQSMESMLSP*RKHSSS
Trigger: AGACGAACTGTGTTTCCTCCAGGGTGAAAGCATTGA...CTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp AAAAGACACCACTGCCCCCTGCTGGATGTCTTGATATCCTCAGAGAATTGCCAGGCACTCAGATCATTCTaGAGATTCTGGATGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KRHHCPLLDVLISSENCQALRSF*RFWMAS
Trigger: TGAAGCCATCCAGAATCTCCAGAATGATCTGAGTGC...CTGGCAATTCTCTGAGGATATCAAGACATCCAGCAGGGGGCAGTGGTGTCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATTCATGTGGCTCATCTTaGCCCACTTCCTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDSCGSS*PTSLKS
Trigger: AGACTTCAAGGAAGTGGGCCAAGATGAGCCACATGA...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CCA 90 bp ACAAGAGCTCTTAGCCACGGAGCCCTATCTGCAGATTCATACTGTATGTTTTTATGGGCCCATGTCATGTaGCTCATCTTGGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: TRALSHGALSADSYCMFLWAHVM*LILAHF
Trigger: GAAGTGGGCCAAGATGAGCCACATGACATGGGCCCA...TAAAAACATACAGTATGAATCTGCAGATAGGGCTCCGTGGCTAAGAGCTCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTGTCCTCTGGATGTCCTaGTCACTCAGTTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: RIASNYLLLKLHWKGICVVLWMS*SLSSSQ
Trigger: CTGTGAGGAACTGAGTGACCAGGACATCCAGAGGAC...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp ACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTAGATCAGCTCATTCTTaGACAGTGTCAAATATTCTC +
Preference number: 4 (lower is better)
Translates to: TGAKLPGRMENVDPSWTPRSAHS*TVSNIL
Trigger: GAGAATATTTGACACTGTGCAAGAATGAGCTGATCT...AGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR GCA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTGAGGCCACTGCGAGATaGGGAAGATACTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RIASNYLLLKLHWKGICVEATAR*GRYFLS
Trigger: TGACAAGAAGTATCTTCCGCATCTCGCAGTGGCCTC...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTAAGGTGATGAGGAACTaGTCCTTCTGGGACTGGACA +
Preference number: 4 (lower is better)
Translates to: RIASNYLLLKLHWKGICVKVMRN*SFWDWT
Trigger: TGTCCAGTCCCAGAAGGACCAGTTCCTCATCACCTT...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp ACAAGAGCTCTTAGCCACGGAGCCCTATCTGCAGATTCATACTGTATGTTTTTAACTCTTCACACAGAATaGGAGCACCAGGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: TRALSHGALSADSYCMFLTLHTE*EHQVLG
Trigger: ACCCAAGACCTGGTGCTCTCATTCTGTGTGAAGAGT...TAAAAACATACAGTATGAATCTGCAGATAGGGCTCCGTGGCTAAGAGCTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp GAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACAGGGCTCTATATGTTTTCCAAGTaGTTGTCATCCACAGACACT +
Preference number: 4 (lower is better)
Translates to: EATLGPGHVIPTFKITGLYMFSK*LSSTDT
Trigger: AGTGTCTGTGGATGACAATCACTTGGAAAACATATA...GAGCCCTGTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTAAGAATCAAGATCGATaGTCCTGGTGGGGACAAAGC +
Preference number: 4 (lower is better)
Translates to: RIASNYLLLKLHWKGICVKNQDR*SWWGQS
Trigger: GCTTTGTCCCCACCAGGAGCATCGATCTTGATTCTT...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp CGCGTAGCATCCACACAGTGTCAACTGTCATTGTTCACATACTTTAGTCTCCAACCTCAGGTAGATAGCTaGCAAGTTGATGTACAGAGC +
Preference number: 4 (lower is better)
Translates to: RVASTQCQLSLFTYFSLQPQVDS*QVDVQS
Trigger: GCTCTGTACATCAACTTGGCAGCTATCTACCTGAGG...TTGGAGACTAAAGTATGTGAACAATGACAGTTGACACTGTGTGGATGCTACGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp CGCGTAGCATCCACACAGTGTCAACTGTCATTGTTCACATACTTTAGTCTCCAACCATCAGGAGATTGGTaGTGGAGGTACATCTTAGAC +
Preference number: 4 (lower is better)
Translates to: RVASTQCQLSLFTYFSLQPSGDW*WRYILD
Trigger: GTCTAAGATGTACCTCCAGCACCAATCTCCTGATGG...TTGGAGACTAAAGTATGTGAACAATGACAGTTGACACTGTGTGGATGCTACGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR GCA 90 bp TATGTGTGCTGGGAACTGAACTTAGGTCCTCTGCAAGAGGAACAAGAGCTCTTACTGCTTAGGTGTTGGTaGCTTAAGCCAAACAGCAAT +
Preference number: 4 (lower is better)
Translates to: YVCWELNLGPLQEEQELLLLRCW*LKPNSN
Trigger: ATTGCTGTTTGGCTTAAGGCACCAACACCTAAGCAG...TAAGAGCTCTTGTTCCTCTTGCAGAGGACCTAAGTTCAGTTCCCAGCACACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp AGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACAGGGCTCTAAGTTCAGGTACGTaGAAAACTTCCAGATTTCCT +
Preference number: 4 (lower is better)
Translates to: RGYLRTRTCHSHLQNHRALSSGT*KTSRFP
Trigger: AGGAAATCTGGAAGTTTTCCACGTACCTGAACTTAG...AGCCCTGTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp TCAGAGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTCAATGCTTTCACCCTaGAGGAAACACAGTTCGTCT +
Preference number: 4 (lower is better)
Translates to: SENCQQLSSFEAPLEGDLSMLSP*RKHSSS
Trigger: AGACGAACTGTGTTTCCTCCAGGGTGAAAGCATTGA...CAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp CGCGTAGCATCCACACAGTGTCAACTGTCATTGTTCACATACTTTAGTCTCCAACTAGAAAAGCCAAGATaGGGGCAAAGTGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: RVASTQCQLSLFTYFSLQLEKPR*GQSAPH
Trigger: ATGTGGAGCACTTTGCCCCCATCTTGGCTTTTCTAG...TTGGAGACTAAAGTATGTGAACAATGACAGTTGACACTGTGTGGATGCTACGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp CGCGTAGCATCCACACAGTGTCAACTGTCATTGTTCACATACTTTAGTCTCCAACCTCAAAGTAGACCCTaGCCTGAGAAAGTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RVASTQCQLSLFTYFSLQPQSRP*PEKVWS
Trigger: AGACCAAACTTTCTCAGGCCAGGGTCTACTTTGAGG...TTGGAGACTAAAGTATGTGAACAATGACAGTTGACACTGTGTGGATGCTACGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR CAA 72 bp CAGAAAATATTCAGTAGCATCATGGGCATCCTTCAGTaGGTAGAAAGTGAGTCGGCCAAGGCGACAATAGAC +
Preference number: 4 (lower is better)
Translates to: QKIFSSIMGILQ*VESESAKATID
Trigger: GTCTATTGTCGCCTTGGCCGACTCACTTTCTACCAACTGAAGGATGCCCATGATGCTACTGAATATTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCTAAGTTCAGGTACGTaGAAAACTTCCAGATTTCCT +
Preference number: 4 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDLSSGT*KTSRFP
Trigger: AGGAAATCTGGAAGTTTTCCACGTACCTGAACTTAG...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CCCAGCAGTTCCCATGAGCACCAAGTGCTGACTTCTTTTGGTTTTGAAGAAAGCGATGTTCCAGACATATaGACACATAGCCTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PSSSHEHQVLTSFGFEESDVPDI*THSLSS
Trigger: TGAACTTAGGCTATGTGTCCATATGTCTGGAACATC...GCTTTCTTCAAAACCAAAAGAAGTCAGCACTTGGTGCTCATGGGAACTGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp CTCCAAATGCTGTCCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCTCAGATGTTCCAGACATATaGACACATAGCCTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LQMLSTKRHTRPKASPSSDVPDI*THSLSS
Trigger: TGAACTTAGGCTATGTGTCCATATGTCTGGAACATC...TGAGGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGGACAGCATTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CCA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTTTGAGCCAGTACGTGTaGTCAAAGAAGAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: RIASNYLLLKLHWKGICVLSQYV*SKKRCS
Trigger: GGAACATCTCTTCTTTGACCACACGTACTGGCTCAA...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
3UTR CAA 72 bp GTGTTTGCTCCAGTTGTGTTCTCCGTTCATCACTTTTaGAGCTGTCAGAATCAGTGTGTTGCTTTCTACCCA +
Preference number: 4 (lower is better)
Translates to: VFAPVVFSVHHF*SCQNQCVAFYP
Trigger: TGGGTAGAAAGCAACACACTGATTCTGACAGCTCAAAAAGTGATGAACGGAGAACACAACTGGAGCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR TCA 90 bp CCCAGCAGTTCCCATGAGCACCAAGTGCTGACTTCTTTTGGTTTTGAAGAAAGCTATATGTTTTCCAAGTaGTTGTCATCCACAGACACT +
Preference number: 4 (lower is better)
Translates to: PSSSHEHQVLTSFGFEESYMFSK*LSSTDT
Trigger: AGTGTCTGTGGATGACAATCACTTGGAAAACATATA...GCTTTCTTCAAAACCAAAAGAAGTCAGCACTTGGTGCTCATGGGAACTGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CCA 90 bp ACAAGAGCTCTTAGCCACGGAGCCCTATCTGCAGATTCATACTGTATGTTTTTAATCCAGGTGGATCCTTaGAAGAACCTTCTTTACCTG +
Preference number: 4 (lower is better)
Translates to: TRALSHGALSADSYCMFLIQVDP*KNLLYL
Trigger: CAGGTAAAGAAGGTTCTTCCAAGGATCCACCTGGAT...TAAAAACATACAGTATGAATCTGCAGATAGGGCTCCGTGGCTAAGAGCTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS CCA 90 bp GCCGGCCAAGGCTCAGGAGCAACCGGATGGCCAGGAAGCAGGACCTaGCCTCCAGAAGGCCACTCCCCACCACGATCCCTTGGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: AGQGSGATGWPGSRT*PPEGHSPPRSLGAA
Trigger: TGCTGCGCCAAGGGATCGTGGTGGGGAGTGGCCTTCTGGAGGCCAGGTCCTGCTTCCTGGCCATCCGGTTGCTCCTGAGCCTTGGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 90 bp GGGCTGACATGGGCACCAGGCCCCTCTGGCCCGTCACTAAGGACATaGCTTCGCACTCCGACTCGCCTCCAGAGAGCACGGAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: GLTWAPGPSGPSLRT*LRTPTRLQRARRSA
Trigger: AGCTGATCTCCGTGCTCTCTGGAGGCGAGTCGGAGTGCGAAGCCATGTCCTTAGTGACGGGCCAGAGGGGCCTGGTGCCCATGTCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CCA 90 bp ATGGCACAACTTCCTCGTGCCGGCCAAGGCTCAGGAGCAACCGGATaGCCAGGAAGCAGGACCTGGCCTCCAGAAGGCCACTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: MAQLPRAGQGSGATG*PGSRTWPPEGHSPP
Trigger: TGGTGGGGAGTGGCCTTCTGGAGGCCAGGTCCTGCTTCCTGGCCATCCGGTTGCTCCTGAGCCTTGGCCGGCACGAGGAAGTTGTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp TCTCTTCAGAGGGCCAGGCTCCCACCACTGAGCCACCGTGCCCTCTCTGAAGAGGCAAGTCCCAGGAGGTaGTGGACCACTCCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: SLQRARLPPLSHRALSEEASPRR*WTTPLW
Trigger: CCAGAGGGGAGTGGTCCACAACCTCCTGGGACTTGC...CTCTTCAGAGAGGGCACGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTGAAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS TCA 90 bp ATCGAGGTCCTCGGGCTCCGGAAGGTGATAGCTGTCCGAGGAGGCTaGGATGAGCTCATCCTCCTCGGGGCTGGAGTCTCCAGAACCGCT +
Preference number: 5 (lower is better)
Translates to: IEVLGLRKVIAVRGG*DELILLGAGVSRTA
Trigger: AGCGGTTCTGGAGACTCCAGCCCCGAGGAGGATGAGCTCATCTCAGCCTCCTCGGACAGCTATCACCTTCCGGAGCCCGAGGACCTCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS GCA 90 bp CTCTGGATGTCCTGGTCACTCAGTTCCTCACAGGCAGCCAGGGCCTaGCTGAGGGTTGGGCAGGCCAGGGCGGAAACCTCACACCAGTTT +
Preference number: 5 (lower is better)
Translates to: LWMSWSLSSSQAARA*LRVGQARAETSHQF
Trigger: AAACTGGTGTGAGGTTTCCGCCCTGGCCTGCCCAACCCTCAGGCAGGCCCTGGCTGCCTGTGAGGAACTGAGTGACCAGGACATCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS GCA 90 bp CCAGAAAGGAGCTGCAGACGTTCTGCGAATGGCACAACTTCCTCGTaGCGGCCAAGGCTCAGGAGCAACCGGATGGCCAGGAAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: PERSCRRSANGTTSS*RPRLRSNRMARKQD
Trigger: GTCCTGCTTCCTGGCCATCCGGTTGCTCCTGAGCCTTGGCCGGCACGAGGAAGTTGTGCCATTCGCAGAACGTCTGCAGCTCCTTTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS GCA 90 bp AGCCTCCGAAGCGGGAGGGTGTCCAGAAAGGAGCTGCAGACGTTCTaGGAATGGCACAACTTCCTCGTGCCGGCCAAGGCTCAGGAGCAA +
Preference number: 5 (lower is better)
Translates to: SLRSGRVSRKELQTF*EWHNFLVPAKAQEQ
Trigger: TTGCTCCTGAGCCTTGGCCGGCACGAGGAAGTTGTGCCATTCGCAGAACGTCTGCAGCTCCTTTCTGGACACCCTCCCGCTTCGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS GCA 90 bp ATGGTGGCTGTAGCCTCCGAAGCGGGAGGGTGTCCAGAAAGGAGCTaGAGACGTTCTGCGAATGGCACAACTTCCTCGTGCCGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: MVAVASEAGGCPERS*RRSANGTTSSCRPR
Trigger: CCTTGGCCGGCACGAGGAAGTTGTGCCATTCGCAGAACGTCTGCAGCTCCTTTCTGGACACCCTCCCGCTTCGGAGGCTACAGCCACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 90 bp CGAAGCGGGAGGGTGTCCAGAAAGGAGCTGCAGACGTTCTGCGAATaGCACAACTTCCTCGTGCCGGCCAAGGCTCAGGAGCAACCGGAT +
Preference number: 5 (lower is better)
Translates to: RSGRVSRKELQTFCE*HNFLVPAKAQEQPD
Trigger: ATCCGGTTGCTCCTGAGCCTTGGCCGGCACGAGGAAGTTGTGCCATTCGCAGAACGTCTGCAGCTCCTTTCTGGACACCCTCCCGCTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp GGAGCCAAGATGCCTCTCACAGAGCCCTTCTCCTTCTGGCCGTTGCTCTTCTCCCCCCACCACGATCCCTaGGCGCAGCACGTAAGTCAC +
Preference number: 5 (lower is better)
Translates to: GAKMPLTEPFSFWPLLFSPHHDP*AQHVSH
Trigger: GTGACTTACGTGCTGCGCCAAGGGATCGTGGTGGGG...GGAGAAGAGCAACGGCCAGAAGGAGAAGGGCTCTGTGAGAGGCATCTTGGCTCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp TCTTCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCCTCCCGATCCCTGAGTaGCTGAGCCAGGGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SSLRTLVRAPGQSAHTFPLPIPE*LSQGQP
Trigger: TGGCTGGCCCTGGCTCAGCAACTCAGGGATCGGGAG...GGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS TCA 90 bp CTATGGTCTGCCGCTCCATCCAGGTCCCACCAGACCTGGCCTCCCTaGAGCCCTCGGGCTGCGATGCACTCAGATCATTCTGGAGATTCT +
Preference number: 5 (lower is better)
Translates to: LWSAAPSRSHQTWPP*SPRAAMHSDHSGDS
Trigger: AGAATCTCCAGAATGATCTGAGTGCATCGCAGCCCGAGGGCTTCAGGGAGGCCAGGTCTGGTGGGACCTGGATGGAGCGGCAGACCATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp GAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTCCCCACCACGATCCCTaGGCGCAGCACGTAAGTCAC +
Preference number: 5 (lower is better)
Translates to: EWRMWIPVGPLGFPPGPSPHHDP*AQHVSH
Trigger: GTGACTTACGTGCTGCGCCAAGGGATCGTGGTGGGG...AGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp AGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCGAGCACCCGAAGGGATaGCTGTGCCACAGGGGACTC +
Preference number: 5 (lower is better)
Translates to: RMENVDPSWTPGLSTWPFEHPKG*LCHRGL
Trigger: GAGTCCCCTGTGGCACAGCAATCCCTTCGGGTGCTC...GAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp TTCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCAGGAGCACCCGAAGGGATaGCTGTGCCACAGGGGACTC +
Preference number: 5 (lower is better)
Translates to: FPENTGEGTRTVCSHFPQEHPKG*LCHRGL
Trigger: GAGTCCCCTGTGGCACAGCAATCCCTTCGGGTGCTC...CTGGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS TCA 90 bp CAAAGTGCTCCACATCATCCTCCTCCAGGCTGGTGCTCAGGTCCATaGACAGTTCCGGGTCATCGAGGTCCTCGGGCTCCGGAAGGTGAT +
Preference number: 5 (lower is better)
Translates to: QSAPHHPPPGWCSGP*TVPGHRGPRAPEGD
Trigger: ATCACCTTCCGGAGCCCGAGGACCTCGATGACCCGGAACTGTTCATGGACCTGAGCACCAGCCTGGAGGAGGATGATGTGGAGCACTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS GCA 90 bp CTCTTTCCTCCTGCTCATAATCCATCAGAGCCTTGCACCGTCCTCTaGCGATCTGGCCGGAGCCTGTCCAGTCTCTCTTCCTGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: LFPPAHNPSEPCTVL*RSGRSLSSLSSWEG
Trigger: GCCTTCCCAGGAAGAGAGACTGGACAGGCTCCGGCCAGATCGGCAGAGGACGGTGCAAGGCTCTGATGGATTATGAGCAGGAGGAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp TCGCTAAAGGAACAGCGCCAGCCCGGTAGTACTCCACAGCACGATGCCTATGGCTCCTGTAAGGCTGCGTaGACACACCTCCTGGAGCGA +
Preference number: 5 (lower is better)
Translates to: SLKEQRQPGSTPQHDAYGSCKAA*THLLER
Trigger: TCGCTCCAGGAGGTGTGTCAACGCAGCCTTACAGGA...GCCATAGGCATCGTGCTGTGGAGTACTACCGGGCTGGCGCTGTTCCTTTAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR CAA 90 bp CAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGCCCCACCACGATCCCTaGGCGCAGCACGTAAGTCAC +
Preference number: 5 (lower is better)
Translates to: QEPSFQVEWRMWIPVGPLPHHDP*AQHVSH
Trigger: GTGACTTACGTGCTGCGCCAAGGGATCGTGGTGGGG...CAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp GTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGGCAAGTCCCAGGAGGTaGTGGACCACTCCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: VTWATFQRQSMEPRCLSQASPRR*WTTPLW
Trigger: CCAGAGGGGAGTGGTCCACAACCTCCTGGGACTTGC...CTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp TCAAGAAGGGGAAGGGTCTCTTCAGAGGGCCAGGCTCCCACCACTGAGCCACCGTCCATGTCTGTCTCCTaGCTGGCTTGGAGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: SRRGRVSSEGQAPTTEPPSMSVS*LAWSSE
Trigger: TTCCGAACTCCAAGCCAGCAAGGAGACAGACATGGA...CGGTGGCTCAGTGGTGGGAGCCTGGCCCTCTGAAGAGACCCTTCCCCTTCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS-3UTR CAA 90 bp GCCTTAGCCTGCGTAAGCTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTACTCCCGATCCCTGAGTaGCTGAGCCAGGGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: ALACVSFWEVLQEPSFQVLPIPE*LSQGQP
Trigger: TGGCTGGCCCTGGCTCAGCAACTCAGGGATCGGGAG...TACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAGCTTACGCAGGCTAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS CCA 90 bp GGAGGAAGCAGAGCCGGGCATGGGCCCATGTCATGTGGCTCATCTTaGCCCACTTCCTTGAAGTCTCTAGGTAGGCCACTAGCTCATCCT +
Preference number: 5 (lower is better)
Translates to: GGSRAGHGPMSCGSS*PTSLKSLGRPLAHP
Trigger: AGGATGAGCTAGTGGCCTACCTAGAGACTTCAAGGAAGTGGGCCAAGATGAGCCACATGACATGGGCCCATGCCCGGCTCTGCTTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 90 bp CTGCTAGTCCGGCCTTCATCTTCAAACGCAAGTCCCAGGAGGTTGTaGACCACTCCCCTCTGGGTCACGCACTCTGTCTCTCTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: LLVRPSSSNASPRRL*TTPLWVTHSVSLKE
Trigger: CTCCTTGAGAGAGACAGAGTGCGTGACCCAGAGGGGAGTGGTCCACAACCTCCTGGGACTTGCGTTTGAAGATGAAGGCCGGACTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp GGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGTCCTGTAAGGCTGCGTaGACACACCTCCTGGAGCGA +
Preference number: 5 (lower is better)
Translates to: GAKLPGRMENVDPSWTPGSCKAA*THLLER
Trigger: TCGCTCCAGGAGGTGTGTCAACGCAGCCTTACAGGA...CCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CAA 90 bp CAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCGTCATGTGGCTCATCTaGGCCCACTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: QLDPWAFHLALLRLSLLSVMWLI*AHFLEV
Trigger: GACTTCAAGGAAGTGGGCCAAGATGAGCCACATGAC...GCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp CCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCTCACAAGAGGCCTCCCCCCCACCACGATCCCTaGGCGCAGCACGTAAGTCAC +
Preference number: 5 (lower is better)
Translates to: PPKDIQDQKPALPHKRPPPHHDP*AQHVSH
Trigger: GTGACTTACGTGCTGCGCCAAGGGATCGTGGTGGGG...GGGAGGCCTCTTGTGAGGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp CCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGATACGCAGGCTCTCCTaGATGCAGGCGAGGGACCTT +
Preference number: 5 (lower is better)
Translates to: PGRMENVDPSWTPGLSTWIRRLS*MQARDL
Trigger: AAGGTCCCTCGCCTGCATCAAGGAGAGCCTGCGTAT...CCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp AGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCATACGCAGGCTCTCCTaGATGCAGGCGAGGGACCTT +
Preference number: 5 (lower is better)
Translates to: RMENVDPSWTPGLSTWPFIRRLS*MQARDL
Trigger: AAGGTCCCTCGCCTGCATCAAGGAGAGCCTGCGTAT...GAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp CAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCAGCTCTGTCAGCTTGTaGAAGATCCGCAGCTCGGTT +
Preference number: 5 (lower is better)
Translates to: QLDPWAFHLALLRLSLLSSSVSL*KIRSSV
Trigger: AACCGAGCTGCGGATCTTCAACAAGCTGACAGAGCT...GCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp GGCAGGAAGGCAGCAGCTAGCCGTGGCAATGTGGTCAAGAAGGGGAAGGGTCTCATGGGCATCCTTCAGTaGGTAGAAAGTGAGTCGGCC +
Preference number: 5 (lower is better)
Translates to: GRKAAASRGNVVKKGKGLMGILQ*VESESA
Trigger: GGCCGACTCACTTTCTACCAACTGAAGGATGCCCAT...GAGACCCTTCCCCTTCTTGACCACATTGCCACGGCTAGCTGCTGCCTTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS TCA 90 bp CCTTGTCTCTCTCCCCTAGGTCGACGAATATACGCAGGCTCTCCTTaGTGCAGGCGAGGGACCTTCGGAGGGACCTGGATGTGTTTAGGT +
Preference number: 5 (lower is better)
Translates to: PCLSPLGRRIYAGSP*CRRGTFGGTWMCLG
Trigger: ACCTAAACACATCCAGGTCCCTCCGAAGGTCCCTCGCCTGCATCAAGGAGAGCCTGCGTATATTCGTCGACCTAGGGGAGAGAGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 90 bp TGGTGCTGGAGGTACATCTTAGACAGGATGAGACACAAGGTCCTCTaGATGTCCTGGTCACTCAGTTCCTCACAGGCAGCCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: WCWRYILDRMRHKVL*MSWSLSSSQAARAC
Trigger: GCAGGCCCTGGCTGCCTGTGAGGAACTGAGTGACCAGGACATCCAGAGGACCTTGTGTCTCATCCTGTCTAAGATGTACCTCCAGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp GGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTCTTGGCCCACTTCCTaGAAGTCTCTAGGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: GRMENVDPSWTPGLSTWPSWPTS*KSLGRP
Trigger: TGGCCTACCTAGAGACTTCAAGGAAGTGGGCCAAGA...GGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp CCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCCAAAACCAATGGGCATCCTTCAGTaGGTAGAAAGTGAGTCGGCC +
Preference number: 5 (lower is better)
Translates to: PLGFPPGPSKAESPEPKPMGILQ*VESESA
Trigger: GGCCGACTCACTTTCTACCAACTGAAGGATGCCCAT...TGGTTTTGGCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000236759.2
CDS GCA 90 bp GGCCCAACCAGAGTAACACCTGTACCAACTCCATGTCTGTCTCCTTaGTGGCTTGGAGTTCGGAATACAGCCGGACAGCCTGCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: GPTRVTPVPTPCLSP*WLGVRNTAGQPAGD
Trigger: ATCTCCTGCAGGCTGTCCGGCTGTATTCCGAACTCCAAGCCAGCAAGGAGACAGACATGGAGTTGGTACAGGTGTTACTCTGGTTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 90 bp AGGTACATCTTAGACAGGATGAGACACAAGGTCCTCTGGATGTCCTaGTCACTCAGTTCCTCACAGGCAGCCAGGGCCTGCCTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: RYILDRMRHKVLWMS*SLSSSQAARACLRV
Trigger: AACCCTCAGGCAGGCCCTGGCTGCCTGTGAGGAACTGAGTGACCAGGACATCCAGAGGACCTTGTGTCTCATCCTGTCTAAGATGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 90 bp TCATCTTCAAACGCAAGTCCCAGGAGGTTGTGGACCACTCCCCTCTaGGTCACGCACTCTGTCTCTCTCAAGGAGCATAGTAGCGGCTCA +
Preference number: 5 (lower is better)
Translates to: SSSNASPRRLWTTPL*VTHSVSLKEHSSGS
Trigger: TGAGCCGCTACTATGCTCCTTGAGAGAGACAGAGTGCGTGACCCAGAGGGGAGTGGTCCACAACCTCCTGGGACTTGCGTTTGAAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp CCCCTGGGCTTTCCACCTGGCCCTTCTAAGGCTGAGTCTCCTGAGCCAAAACCAATTTCCTCCAGGGTCTaGAAGGTGATGAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: PLGFPPGPSKAESPEPKPISSRV*KVMRNW
Trigger: CCAGTTCCTCATCACCTTCAAGACCCTGGAGGAAAT...TGGTTTTGGCTCAGGAGACTCAGCCTTAGAAGGGCCAGGTGGAAAGCCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CAA 90 bp CTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTCTTGGCCCACTTCCTaGAAGTCTCTAGGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: LGNIPEAKHGAKMPLTEPSWPTS*KSLGRP
Trigger: TGGCCTACCTAGAGACTTCAAGGAAGTGGGCCAAGA...GGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp GGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGTCTTGGCCCACTTCCTaGAAGTCTCTAGGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: GAKLPGRMENVDPSWTPGSWPTS*KSLGRP
Trigger: TGGCCTACCTAGAGACTTCAAGGAAGTGGGCCAAGA...CCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp AGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTCCATGTCTGTCTCCTaGCTGGCTTGGAGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: RMENVDPSWTPGLSTWPFSMSVS*LAWSSE
Trigger: TTCCGAACTCCAAGCCAGCAAGGAGACAGACATGGA...GAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCTCCCGATCCCTGAGTaGCTGAGCCAGGGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDLPIPE*LSQGQP
Trigger: TGGCTGGCCCTGGCTCAGCAACTCAGGGATCGGGAG...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp AGTCTCCAAATGCTGTCCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCCTCCCGATCCCTGAGTaGCTGAGCCAGGGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SLQMLSTKRHTRPKASPSLPIPE*LSQGQP
Trigger: TGGCTGGCCCTGGCTCAGCAACTCAGGGATCGGGAG...GGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGGACAGCATTTGGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS CCA 90 bp TGTTTTCAAGTGAGGACGTGTCCTCAGCCAATCCAGGTGGATCCTTaGAAGAACCTTCTTTACCTGGACCCCAGGGTAGACTCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: CFQVRTCPQPIQVDP*KNLLYLDPRVDSAP
Trigger: GGGAGCGGAGTCTACCCTGGGGTCCAGGTAAAGAAGGTTCTTCCAAGGATCCACCTGGATTGGCTGAGGACACGTCCTCACTTGAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp GGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCAAAAAGGCAGAGTTCTaGCTCATCGGGGAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: GRMENVDPSWTPGLSTWPKKAEF*LIGEQE
Trigger: TTCTTGCTCCCCGATGAGCAAGAACTCTGCCTTTTT...GGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp GTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGGTCATGTGGCTCATCTaGGCCCACTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: VTWATFQRQSMEPRCLSQVMWLI*AHFLEV
Trigger: GACTTCAAGGAAGTGGGCCAAGATGAGCCACATGAC...CTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp GGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCAGAACCATCAGGAGATaGGTGCTGGAGGTACATCTT +
Preference number: 5 (lower is better)
Translates to: GRMENVDPSWTPGLSTWPRTIRR*VLEVHL
Trigger: AAGATGTACCTCCAGCACCAATCTCCTGATGGTTCT...GGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp CTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGCAAGTCCCAGGAGGTaGTGGACCACTCCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: LFVYKSHSDLGNIPEAKHASPRR*WTTPLW
Trigger: CCAGAGGGGAGTGGTCCACAACCTCCTGGGACTTGC...ATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS TCA 90 bp CGGGGTTCGGGGACACCGAGCTGTAGAAATGGCAGAGGGATTTGGTaGCCTGAAGTTGACTGCTTAGGTGTTGGTGCCTTAAGCCAAACA +
Preference number: 5 (lower is better)
Translates to: RGSGTPSCRNGRGIW*PEVDCLGVGALSQT
Trigger: TGTTTGGCTTAAGGCACCAACACCTAAGCAGTCAACTTCAGGTCACCAAATCCCTCTGCCATTTCTACAGCTCGGTGTCCCCGAACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 90 bp TCCTCCAGGGTCTTGAAGGTGATGAGGAACTGGTCCTTCTGGGACTaGACACTCACCAACCTTGCAGAGAGATCCTTAAATAGCGCGTGG +
Preference number: 5 (lower is better)
Translates to: SSRVLKVMRNWSFWD*TLTNLAERSLNSAW
Trigger: CCACGCGCTATTTAAGGATCTCTCTGCAAGGTTGGTGAGTGTCCAGTCCCAGAAGGACCAGTTCCTCATCACCTTCAAGACCCTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CCA 90 bp CCAACCAGAGTAACACCTGTACCAACTCCATGTCTGTCTCCTTGCTaGCTTGGAGTTCGGAATACAGCCGGACAGCCTGCAGGAGATAAC +
Preference number: 5 (lower is better)
Translates to: PTRVTPVPTPCLSPC*LGVRNTAGQPAGDN
Trigger: GTTATCTCCTGCAGGCTGTCCGGCTGTATTCCGAACTCCAAGCCAGCAAGGAGACAGACATGGAGTTGGTACAGGTGTTACTCTGGTTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp CTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCAAACCTCACACCAGTTaGAAGAAGGAACACCCAGGA +
Preference number: 5 (lower is better)
Translates to: LGNIPEAKHGAKMPLTEPKPHTS*KKEHPG
Trigger: TCCTGGGTGTTCCTTCTTCAAACTGGTGTGAGGTTT...GGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp CTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCAGAACCATCAGGAGATaGGTGCTGGAGGTACATCTT +
Preference number: 5 (lower is better)
Translates to: LGNIPEAKHGAKMPLTEPRTIRR*VLEVHL
Trigger: AAGATGTACCTCCAGCACCAATCTCCTGATGGTTCT...GGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp TGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCACCTGGCCCTTCTAAGAGAACCATCAGGAGATaGGTGCTGGAGGTACATCTT +
Preference number: 5 (lower is better)
Translates to: WRMWIPVGPLGFPPGPSKRTIRR*VLEVHL
Trigger: AAGATGTACCTCCAGCACCAATCTCCTGATGGTTCT...CTTAGAAGGGCCAGGTGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp TATGTGTGCTGGGAACTGAACTTAGGTCCTCTGCAAGAGGAACAAGAGCTCTTAGCAAGTCCCAGGAGGTaGTGGACCACTCCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: YVCWELNLGPLQEEQELLASPRR*WTTPLW
Trigger: CCAGAGGGGAGTGGTCCACAACCTCCTGGGACTTGC...TAAGAGCTCTTGTTCCTCTTGCAGAGGACCTAAGTTCAGTTCCCAGCACACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp CAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCTCTCCATGTCTGTCTCCTaGCTGGCTTGGAGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: QHSRGKAWSQDASHRALLSMSVS*LAWSSE
Trigger: TTCCGAACTCCAAGCCAGCAAGGAGACAGACATGGA...GAGAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp GAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACAGGGCTCTCAGCCAGCCTTCAGTaGGTAGAAAGTGAGTCGGCC +
Preference number: 5 (lower is better)
Translates to: EATLGPGHVIPTFKITGLSASLQ*VESESA
Trigger: GGCCGACTCACTTTCTACCAACTGAAGGCTGGCTGA...GAGCCCTGTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS GCA 90 bp AAGGAGCATAGTAGCGGCTCAAGAATCTCCAAGGCCTTCTCTGTCTaGCTGCCTAAGAGGTATGCCCATGCCAGACAGAGAGAAGATTCG +
Preference number: 5 (lower is better)
Translates to: KEHSSGSRISKAFSV*LPKRYAHARQREDS
Trigger: CGAATCTTCTCTCTGTCTGGCATGGGCATACCTCTTAGGCAGGCAGACAGAGAAGGCCTTGGAGATTCTTGAGCCGCTACTATGCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 90 bp CAGCTCATTCTTGCACAGTGTCAAATATTCTCCTTCCTTGTCAGCTaGCTGAGCCACGGAGCACACGGCTCTGCAGAAGAAGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: QLILAQCQIFSFLVS*LSHGAHGSAEEVTF
Trigger: GAAGGTCACTTCTTCTGCAGAGCCGTGTGCTCCGTGGCTCAGCCAGCTGACAAGGAAGGAGAATATTTGACACTGTGCAAGAATGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CCA 90 bp CAGAGTTCTTGCTCATCGGGGAGCAAGAATCAAGATCGATGCTCCTaGTGGGGACAAAGCCCACTTCTCCTGAACTCACTGACTTCCCAA +
Preference number: 5 (lower is better)
Translates to: QSSCSSGSKNQDRCS*WGQSPLLLNSLTSQ
Trigger: TTGGGAAGTCAGTGAGTTCAGGAGAAGTGGGCTTTGTCCCCACCAGGAGCATCGATCTTGATTCTTGCTCCCCGATGAGCAAGAACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp TCTTCCCTGAGAACACTGGTGAGGGCACCAGGACAGTCTGCTCACACTTTCCCCAATCCAGGTGGATCCTaGGAAGAACCTTCTTTACCT +
Preference number: 5 (lower is better)
Translates to: SSLRTLVRAPGQSAHTFPNPGGS*EEPSLP
Trigger: AGGTAAAGAAGGTTCTTCCAAGGATCCACCTGGATT...GGGGAAAGTGTGAGCAGACTGTCCTGGTGCCCTCACCAGTGTTCTCAGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CAA 90 bp AGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCAATTTCCTCCAGGGTCTaGAAGGTGATGAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: SFQVEWRMWIPVGPLGFPISSRV*KVMRNW
Trigger: CCAGTTCCTCATCACCTTCAAGACCCTGGAGGAAAT...TGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CAA 90 bp CAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGAAAAAGGCAGAGTTCTaGCTCATCGGGGAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: QEPSFQVEWRMWIPVGPLKKAEF*LIGEQE
Trigger: TTCTTGCTCCCCGATGAGCAAGAACTCTGCCTTTTT...CAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp GTCTGGATGGCCTCCTGCAAATACAGTTCTACCAGCTCATCTTCCTGCATGAGGGTCATGTGGCTCATCTaGGCCCACTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: VWMASCKYSSTSSSSCMRVMWLI*AHFLEV
Trigger: GACTTCAAGGAAGTGGGCCAAGATGAGCCACATGAC...CCTCATGCAGGAAGATGAGCTGGTAGAACTGTATTTGCAGGAGGCCATCCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235652.2
CDS CCA 90 bp GAAAACTTCCAGATTTCCTCCAGGGTCTTGAAGGTGATGAGGAACTaGTCCTTCTGGGACTGGACACTCACCAACCTTGCAGAGAGATCC +
Preference number: 5 (lower is better)
Translates to: ENFQISSRVLKVMRN*SFWDWTLTNLAERS
Trigger: GGATCTCTCTGCAAGGTTGGTGAGTGTCCAGTCCCAGAAGGACCAGTTCCTCATCACCTTCAAGACCCTGGAGGAAATCTGGAAGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp CCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCTCACAAGAGGCCTCCCAAAAAGGCAGAGTTCTaGCTCATCGGGGAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: PPKDIQDQKPALPHKRPPKKAEF*LIGEQE
Trigger: TTCTTGCTCCCCGATGAGCAAGAACTCTGCCTTTTT...GGGAGGCCTCTTGTGAGGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp GAGGTCAGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACGTCATGTGGCTCATCTaGGCCCACTTCCTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: EVRGYLRTRTCHSHLQNHVMWLI*AHFLEV
Trigger: GACTTCAAGGAAGTGGGCCAAGATGAGCCACATGAC...GTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp AGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTGGGCTTTCCAAAACCTCACACCAGTTaGAAGAAGGAACACCCAGGA +
Preference number: 5 (lower is better)
Translates to: SFQVEWRMWIPVGPLGFPKPHTS*KKEHPG
Trigger: TCCTGGGTGTTCCTTCTTCAAACTGGTGTGAGGTTT...TGGAAAGCCCAGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp GAGGTCAGAGGCTACCTTAGGACCAGGACATGTCATTCCCACCTTCAAAATCACTCCATGTCTGTCTCCTaGCTGGCTTGGAGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: EVRGYLRTRTCHSHLQNHSMSVS*LAWSSE
Trigger: TTCCGAACTCCAAGCCAGCAAGGAGACAGACATGGA...GTGATTTTGAAGGTGGGAATGACATGTCCTGGTCCTAAGGTAGCCTCTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp AAAAGACACCACTGCCCCCTGCTGGATGTCTTGATATCCTCAGAGAATTGCCAGAGCTCTGTCAGCTTGTaGAAGATCCGCAGCTCGGTT +
Preference number: 5 (lower is better)
Translates to: KRHHCPLLDVLISSENCQSSVSL*KIRSSV
Trigger: AACCGAGCTGCGGATCTTCAACAAGCTGACAGAGCT...CTGGCAATTCTCTGAGGATATCAAGACATCCAGCAGGGGGCAGTGGTGTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS CCA 90 bp CAGATTTCCTCCAGGGTCTTGAAGGTGATGAGGAACTGGTCCTTCTaGGACTGGACACTCACCAACCTTGCAGAGAGATCCTTAAATAGC +
Preference number: 5 (lower is better)
Translates to: QISSRVLKVMRNWSF*DWTLTNLAERSLNS
Trigger: GCTATTTAAGGATCTCTCTGCAAGGTTGGTGAGTGTCCAGTCCCAGAAGGACCAGTTCCTCATCACCTTCAAGACCCTGGAGGAAATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTTCCTGTAAGGCTGCGTaGACACACCTCCTGGAGCGA +
Preference number: 5 (lower is better)
Translates to: RIASNYLLLKLHWKGICVSCKAA*THLLER
Trigger: TCGCTCCAGGAGGTGTGTCAACGCAGCCTTACAGGA...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp CGCGTAGCATCCACACAGTGTCAACTGTCATTGTTCACATACTTTAGTCTCCAAATACGCAGGCTCTCCTaGATGCAGGCGAGGGACCTT +
Preference number: 5 (lower is better)
Translates to: RVASTQCQLSLFTYFSLQIRRLS*MQARDL
Trigger: AAGGTCCCTCGCCTGCATCAAGGAGAGCCTGCGTAT...TTGGAGACTAAAGTATGTGAACAATGACAGTTGACACTGTGTGGATGCTACGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp GTGACCTGGGCAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGGAGATCAGCTCATTCTaGCACAGTGTCAAATATTCT +
Preference number: 5 (lower is better)
Translates to: VTWATFQRQSMEPRCLSQEISSF*HSVKYS
Trigger: AGAATATTTGACACTGTGCAAGAATGAGCTGATCTC...CTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTGCCCAGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CAA 90 bp TCAGAGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTCTTGGCCCACTTCCTaGAAGTCTCTAGGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: SENCQQLSSFEAPLEGDLSWPTS*KSLGRP
Trigger: TGGCCTACCTAGAGACTTCAAGGAAGTGGGCCAAGA...CAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp TTGGAGCTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAACCTCACACCAGTTaGAAGAAGGAACACCCAGGA +
Preference number: 5 (lower is better)
Translates to: LELFVYKSHSDLGNIPEAKPHTS*KKEHPG
Trigger: TCCTGGGTGTTCCTTCTTCAAACTGGTGTGAGGTTT...TGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAGCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp ACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATCCCAGTTGGACCCCTAGGAAACATTTTCTCTaGTTTTCAAGTGAGGACGTG +
Preference number: 5 (lower is better)
Translates to: TGAKLPGRMENVDPSWTPRKHFL*FSSEDV
Trigger: CACGTCCTCACTTGAAAACAAGAGAAAATGTTTCCT...AGGGGTCCAACTGGGATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CAA 90 bp CAACATTCCAGAGGCAAAGCATGGAGCCAAGATGCCTCTCACAGAGCCCTTCTCAGGAAACATTTTCTCTaGTTTTCAAGTGAGGACGTG +
Preference number: 5 (lower is better)
Translates to: QHSRGKAWSQDASHRALLRKHFL*FSSEDV
Trigger: CACGTCCTCACTTGAAAACAAGAGAAAATGTTTCCT...GAGAAGGGCTCTGTGAGAGGCATCTTGGCTCCATGCTTTGCCTCTGGAATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CAA 90 bp CTTCTGGGAAGTCTTACAGGAGCCAAGCTTCCAGGTAGAATGGAGAATGTGGATAAAAAGGCAGAGTTCTaGCTCATCGGGGAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: LLGSLTGAKLPGRMENVDKKAEF*LIGEQE
Trigger: TTCTTGCTCCCCGATGAGCAAGAACTCTGCCTTTTT...ATCCACATTCTCCATTCTACCTGGAAGCTTGGCTCCTGTAAGACTTCCCAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000236759.2
CDS-3UTR CAA 90 bp AGTCTCCAAATGCTGTCCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCAGAACCATCAGGAGATaGGTGCTGGAGGTACATCTT +
Preference number: 5 (lower is better)
Translates to: SLQMLSTKRHTRPKASPSRTIRR*VLEVHL
Trigger: AAGATGTACCTCCAGCACCAATCTCCTGATGGTTCT...GGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGGACAGCATTTGGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS TCA 90 bp TTGGGTCATATTCTGTGGCAGGAAACATTTTCTCTTGTTTTCAAGTaGGGACGTGTCCTCAGCCAATCCAGGTGGATCCTTGGAAGAACC +
Preference number: 5 (lower is better)
Translates to: LGHILWQETFSLVFK*GRVLSQSRWILGRT
Trigger: GGTTCTTCCAAGGATCCACCTGGATTGGCTGAGGACACGTCCTCACTTGAAAACAAGAGAAAATGTTTCCTGCCACAGAATATGACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp CCCAGCAGTTCCCATGAGCACCAAGTGCTGACTTCTTTTGGTTTTGAAGAAAGCAATCCAGGTGGATCCTaGGAAGAACCTTCTTTACCT +
Preference number: 5 (lower is better)
Translates to: PSSSHEHQVLTSFGFEESNPGGS*EEPSLP
Trigger: AGGTAAAGAAGGTTCTTCCAAGGATCCACCTGGATT...GCTTTCTTCAAAACCAAAAGAAGTCAGCACTTGGTGCTCATGGGAACTGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CAA 90 bp CGCGTAGCATCCACACAGTGTCAACTGTCATTGTTCACATACTTTAGTCTCCAAATTTCCTCCAGGGTCTaGAAGGTGATGAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: RVASTQCQLSLFTYFSLQISSRV*KVMRNW
Trigger: CCAGTTCCTCATCACCTTCAAGACCCTGGAGGAAAT...TTGGAGACTAAAGTATGTGAACAATGACAGTTGACACTGTGTGGATGCTACGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp TCAGAGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGAATCCAGGTGGATCCTaGGAAGAACCTTCTTTACCT +
Preference number: 5 (lower is better)
Translates to: SENCQQLSSFEAPLEGDLNPGGS*EEPSLP
Trigger: AGGTAAAGAAGGTTCTTCCAAGGATCCACCTGGATT...CAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp AGAATTGCCAGCAACTATCTTCTTTTGAAGCTCCACTGGAAGGGGATCTGTGTTAAACCTCACACCAGTTaGAAGAAGGAACACCCAGGA +
Preference number: 5 (lower is better)
Translates to: RIASNYLLLKLHWKGICVKPHTS*KKEHPG
Trigger: TCCTGGGTGTTCCTTCTTCAAACTGGTGTGAGGTTT...AACACAGATCCCCTTCCAGTGGAGCTTCAAAAGAAGATAGTTGCTGGCAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS-3UTR CAA 90 bp CTGTTTGTGTACAAGAGTCACAGTGACCTGGGCAACATTCCAGAGGCAAAGCATGAGATCAGCTCATTCTaGCACAGTGTCAAATATTCT +
Preference number: 5 (lower is better)
Translates to: LFVYKSHSDLGNIPEAKHEISSF*HSVKYS
Trigger: AGAATATTTGACACTGTGCAAGAATGAGCTGATCTC...ATGCTTTGCCTCTGGAATGTTGCCCAGGTCACTGTGACTCTTGTACACAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
CDS-3UTR CAA 90 bp CTCCAAATGCTGTCCACCAAAAGACATACAAGACCAAAAGCCAGCCCTTCCTCAGAGATCAGCTCATTCTaGCACAGTGTCAAATATTCT +
Preference number: 5 (lower is better)
Translates to: LQMLSTKRHTRPKASPSSEISSF*HSVKYS
Trigger: AGAATATTTGACACTGTGCAAGAATGAGCTGATCTC...TGAGGAAGGGCTGGCTTTTGGTCTTGTATGTCTTTTGGTGGACAGCATTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235860.2
CDS CCA 72 bp TGGGCACCAGGCCCCTCTGGCCCGTCACTAAGGACATaGCTTCGCACTCCGACTCGCCTCCAGAGAGCACGG +
Preference number: 6 (lower is better)
Translates to: WAPGPSGPSLRT*LRTPTRLQRAR
Trigger: CCGTGCTCTCTGGAGGCGAGTCGGAGTGCGAAGCCATGTCCTTAGTGACGGGCCAGAGGGGCCTGGTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CCA 72 bp GGCTCAGGAGCAACCGGATGGCCAGGAAGCAGGACCTaGCCTCCAGAAGGCCACTCCCCACCACGATCCCTT +
Preference number: 6 (lower is better)
Translates to: GSGATGWPGSRT*PPEGHSPPRSL
Trigger: AAGGGATCGTGGTGGGGAGTGGCCTTCTGGAGGCCAGGTCCTGCTTCCTGGCCATCCGGTTGCTCCTGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS TCA 72 bp CTCGGGCTCCGGAAGGTGATAGCTGTCCGAGGAGGCTaGGATGAGCTCATCCTCCTCGGGGCTGGAGTCTCC +
Preference number: 6 (lower is better)
Translates to: LGLRKVIAVRGG*DELILLGAGVS
Trigger: GGAGACTCCAGCCCCGAGGAGGATGAGCTCATCTCAGCCTCCTCGGACAGCTATCACCTTCCGGAGCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS GCA 72 bp TCTCCAGAACCGCTGGAACGCCTAGAGCCTATGGTCTaGCGCTCCATCCAGGTCCCACCAGACCTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SPEPLERLEPMV*RSIQVPPDLAS
Trigger: GGAGGCCAGGTCTGGTGGGACCTGGATGGAGCGGCAGACCATAGGCTCTAGGCGTTCCAGCGGTTCTGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS TCA 72 bp CCACATCATCCTCCTCCAGGCTGGTGCTCAGGTCCATaGACAGTTCCGGGTCATCGAGGTCCTCGGGCTCCG +
Preference number: 6 (lower is better)
Translates to: PHHPPPGWCSGP*TVPGHRGPRAP
Trigger: CGGAGCCCGAGGACCTCGATGACCCGGAACTGTTCATGGACCTGAGCACCAGCCTGGAGGAGGATGATGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS GCA 72 bp CCTTGTCAGCTGGCTGAGCCACGGAGCACACGGCTCTaGAGAAGAAGTGACCTTCCTGCAGCAGGAGGCCCA +
Preference number: 6 (lower is better)
Translates to: PCQLAEPRSTRL*RRSDLPAAGGP
Trigger: TGGGCCTCCTGCTGCAGGAAGGTCACTTCTTCTGCAGAGCCGTGTGCTCCGTGGCTCAGCCAGCTGACAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS GCA 72 bp AGCTGCAGACGTTCTGCGAATGGCACAACTTCCTCGTaGCGGCCAAGGCTCAGGAGCAACCGGATGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SCRRSANGTTSS*RPRLRSNRMAR
Trigger: CCTGGCCATCCGGTTGCTCCTGAGCCTTGGCCGGCACGAGGAAGTTGTGCCATTCGCAGAACGTCTGCAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS TCA 72 bp CAGCCTGGTTACGTATGTTCCCCATCTCCCGAGCTCTaGTCAGAGCTCGGAGGTAGCTCTTGGCCGCCCTGC +
Preference number: 6 (lower is better)
Translates to: QPGYVCSPSPEL*SELGGSSWPPC
Trigger: GCAGGGCGGCCAAGAGCTACCTCCGAGCTCTGATCAGAGCTCGGGAGATGGGGAACATACGTAACCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS GCA 72 bp AGCGGGAGGGTGTCCAGAAAGGAGCTGCAGACGTTCTaGGAATGGCACAACTTCCTCGTGCCGGCCAAGGCT +
Preference number: 6 (lower is better)
Translates to: SGRVSRKELQTF*EWHNFLVPAKA
Trigger: AGCCTTGGCCGGCACGAGGAAGTTGTGCCATTCGCAGAACGTCTGCAGCTCCTTTCTGGACACCCTCCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS GCA 72 bp CGTCTCTTTCCTCCTGCTCATAATCCATCAGAGCCTTaGACCGTCCTCTGCCGATCTGGCCGGAGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: RLFPPAHNPSEP*TVLCRSGRSLS
Trigger: GGACAGGCTCCGGCCAGATCGGCAGAGGACGGTGCAAGGCTCTGATGGATTATGAGCAGGAGGAAAGAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS GCA 72 bp GTAGCCTCCGAAGCGGGAGGGTGTCCAGAAAGGAGCTaGAGACGTTCTGCGAATGGCACAACTTCCTCGTGC +
Preference number: 6 (lower is better)
Translates to: VASEAGGCPERS*RRSANGTTSSC
Trigger: GCACGAGGAAGTTGTGCCATTCGCAGAACGTCTGCAGCTCCTTTCTGGACACCCTCCCGCTTCGGAGGCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 72 bp GGCAGGCCAGCAGAGCGCCCGCCTTTTCAAGCAAGGTaGGCCCTTTATGTCTTAGCCTCTGCCTCAGGTAGA +
Preference number: 6 (lower is better)
Translates to: GRPAERPPFQAR*ALYVLASASGR
Trigger: TCTACCTGAGGCAGAGGCTAAGACATAAAGGGCCCACCTTGCTTGAAAAGGCGGGCGCTCTGCTGGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 72 bp AGGGTGTCCAGAAAGGAGCTGCAGACGTTCTGCGAATaGCACAACTTCCTCGTGCCGGCCAAGGCTCAGGAG +
Preference number: 6 (lower is better)
Translates to: RVSRKELQTFCE*HNFLVPAKAQE
Trigger: CTCCTGAGCCTTGGCCGGCACGAGGAAGTTGTGCCATTCGCAGAACGTCTGCAGCTCCTTTCTGGACACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CAA 72 bp GTCCGGCCTTCATCTTCAAACGCAAGTCCCAGGAGGTaGTGGACCACTCCCCTCTGGGTCACGCACTCTGTC +
Preference number: 6 (lower is better)
Translates to: VRPSSSNASPRR*WTTPLWVTHSV
Trigger: GACAGAGTGCGTGACCCAGAGGGGAGTGGTCCACAACCTCCTGGGACTTGCGTTTGAAGATGAAGGCCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CAA 90 bp GCCCTGCTAGTCCGGCCTTCATCTTCAAACGCAAGTCCCAGGAGGTaGTGGACCACTCCCCTCTGGGTCACGCACTCTGTCTCTCTCAAG +
Preference number: 6 (lower is better)
Translates to: ALLVRPSSSNASPRR*WTTPLWVTHSVSLK
Trigger: CTTGAGAGAGACAGAGTGCGTGACCCAGAGGGGAGTGGTCCACAACCTCCTGGGACTTGCGTTTGAAGATGAAGGCCGGACTAGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CAA 90 bp GCCTTGTCTCTCTCCCCTAGGTCGACGAATATACGCAGGCTCTCCTaGATGCAGGCGAGGGACCTTCGGAGGGACCTGGATGTGTTTAGG +
Preference number: 6 (lower is better)
Translates to: ALSLSPRSTNIRRLS*MQARDLRRDLDVFR
Trigger: CCTAAACACATCCAGGTCCCTCCGAAGGTCCCTCGCCTGCATCAAGGAGAGCCTGCGTATATTCGTCGACCTAGGGGAGAGAGACAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 72 bp CGGCCTTCATCTTCAAACGCAAGTCCCAGGAGGTTGTaGACCACTCCCCTCTGGGTCACGCACTCTGTCTCT +
Preference number: 6 (lower is better)
Translates to: RPSSSNASPRRL*TTPLWVTHSVS
Trigger: AGAGACAGAGTGCGTGACCCAGAGGGGAGTGGTCCACAACCTCCTGGGACTTGCGTTTGAAGATGAAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 72 bp CGGCTGTGGACCAGCTGGTGTCCAGACACCGAAGCTTaGCCCAACCAGAGTAACACCTGTACCAACTCCATG +
Preference number: 6 (lower is better)
Translates to: RLWTSWCPDTEA*PNQSNTCTNSM
Trigger: CATGGAGTTGGTACAGGTGTTACTCTGGTTGGGCCAAGCTTCGGTGTCTGGACACCAGCTGGTCCACAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS TCA 72 bp AGAGCCGTCTCCGTGCAGCTTCCTGTAAGGCTGCGTTaGCACACCTCCTGGAGCGACTCTTCACACAGAATG +
Preference number: 6 (lower is better)
Translates to: RAVSVQLPVRLR*HTSWSDSSHRM
Trigger: CATTCTGTGTGAAGAGTCGCTCCAGGAGGTGTGTCAACGCAGCCTTACAGGAAGCTGCACGGAGACGGCTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CCA 72 bp CTTGCAGAGAGATCCTTAAATAGCGCGTGGACTTCCTaGGCTTCATTCTCCAGGGCCCAGAGCCGTCTCCGT +
Preference number: 6 (lower is better)
Translates to: LAERSLNSAWTS*ASFSRAQSRLR
Trigger: ACGGAGACGGCTCTGGGCCCTGGAGAATGAAGCCCAGGAAGTCCACGCGCTATTTAAGGATCTCTCTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CCA 72 bp TGCCGATCTGGCCGGAGCCTGTCCAGTCTCTCTTCCTaGGAAGGCCACAGATTCCTGGGTGATTCTTTAGGA +
Preference number: 6 (lower is better)
Translates to: CRSGRSLSSLSS*EGHRFLGDSLG
Trigger: TCCTAAAGAATCACCCAGGAATCTGTGGCCTTCCCAGGAAGAGAGACTGGACAGGCTCCGGCCAGATCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CCA 72 bp AACGCAAGTCCCAGGAGGTTGTGGACCACTCCCCTCTaGGTCACGCACTCTGTCTCTCTCAAGGAGCATAGT +
Preference number: 6 (lower is better)
Translates to: NASPRRLWTTPL*VTHSVSLKEHS
Trigger: ACTATGCTCCTTGAGAGAGACAGAGTGCGTGACCCAGAGGGGAGTGGTCCACAACCTCCTGGGACTTGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CAA 72 bp CAGAGCCGTCTCCGTGCAGCTTCCTGTAAGGCTGCGTaGACACACCTCCTGGAGCGACTCTTCACACAGAAT +
Preference number: 6 (lower is better)
Translates to: QSRLRAASCKAA*THLLERLFTQN
Trigger: ATTCTGTGTGAAGAGTCGCTCCAGGAGGTGTGTCAACGCAGCCTTACAGGAAGCTGCACGGAGACGGCTCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CAA 90 bp TGGCCCAACCAGAGTAACACCTGTACCAACTCCATGTCTGTCTCCTaGCTGGCTTGGAGTTCGGAATACAGCCGGACAGCCTGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: WPNQSNTCTNSMSVS*LAWSSEYSRTACRR
Trigger: TCTCCTGCAGGCTGTCCGGCTGTATTCCGAACTCCAAGCCAGCAAGGAGACAGACATGGAGTTGGTACAGGTGTTACTCTGGTTGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 72 bp GTGAGGACGTGTCCTCAGCCAATCCAGGTGGATCCTTaGAAGAACCTTCTTTACCTGGACCCCAGGGTAGAC +
Preference number: 6 (lower is better)
Translates to: VRTCPQPIQVDP*KNLLYLDPRVD
Trigger: GTCTACCCTGGGGTCCAGGTAAAGAAGGTTCTTCCAAGGATCCACCTGGATTGGCTGAGGACACGTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CCA 72 bp CTGAAGCCCTCGGGCTGCGATGCACTCAGATCATTCTaGAGATTCTGGATGGCTTCAAACTCACTCAGCCGG +
Preference number: 6 (lower is better)
Translates to: LKPSGCDALRSF*RFWMASNSLSR
Trigger: CCGGCTGAGTGAGTTTGAAGCCATCCAGAATCTCCAGAATGATCTGAGTGCATCGCAGCCCGAGGGCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 72 bp GGTCGGTGTAGCCTTCGTGATCTAGAAAAGCCAAGATaGGGGCAAAGTGCTCCACATCATCCTCCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: GRCSLRDLEKPR*GQSAPHHPPPG
Trigger: GCCTGGAGGAGGATGATGTGGAGCACTTTGCCCCCATCTTGGCTTTTCTAGATCACGAAGGCTACACCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 72 bp GGGAGAGGTCCTCAAACGCCCCATCAAGGACTCGAATaGCCTCCTCAAAGTAGACCCTGGCCTGAGAAAGTT +
Preference number: 6 (lower is better)
Translates to: GRGPQTPHQGLE*PPQSRPWPEKV
Trigger: AACTTTCTCAGGCCAGGGTCTACTTTGAGGAGGCCATTCGAGTCCTTGATGGGGCGTTTGAGGACCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS GCA 72 bp AGTAGCGGCTCAAGAATCTCCAAGGCCTTCTCTGTCTaGCTGCCTAAGAGGTATGCCCATGCCAGACAGAGA +
Preference number: 6 (lower is better)
Translates to: SSGSRISKAFSV*LPKRYAHARQR
Trigger: TCTCTGTCTGGCATGGGCATACCTCTTAGGCAGGCAGACAGAGAAGGCCTTGGAGATTCTTGAGCCGCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 72 bp TGCTCATCGGGGAGCAAGAATCAAGATCGATGCTCCTaGTGGGGACAAAGCCCACTTCTCCTGAACTCACTG +
Preference number: 6 (lower is better)
Translates to: CSSGSKNQDRCS*WGQSPLLLNSL
Trigger: CAGTGAGTTCAGGAGAAGTGGGCTTTGTCCCCACCAGGAGCATCGATCTTGATTCTTGCTCCCCGATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CAA 72 bp AGTGAGGACGTGTCCTCAGCCAATCCAGGTGGATCCTaGGAAGAACCTTCTTTACCTGGACCCCAGGGTAGA +
Preference number: 6 (lower is better)
Translates to: SEDVSSANPGGS*EEPSLPGPQGR
Trigger: TCTACCCTGGGGTCCAGGTAAAGAAGGTTCTTCCAAGGATCCACCTGGATTGGCTGAGGACACGTCCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CAA 72 bp CAGAGTAACACCTGTACCAACTCCATGTCTGTCTCCTaGCTGGCTTGGAGTTCGGAATACAGCCGGACAGCC +
Preference number: 6 (lower is better)
Translates to: QSNTCTNSMSVS*LAWSSEYSRTA
Trigger: GGCTGTCCGGCTGTATTCCGAACTCCAAGCCAGCAAGGAGACAGACATGGAGTTGGTACAGGTGTTACTCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CAA 90 bp TTGTTTTCAAGTGAGGACGTGTCCTCAGCCAATCCAGGTGGATCCTaGGAAGAACCTTCTTTACCTGGACCCCAGGGTAGACTCCGCTCC +
Preference number: 6 (lower is better)
Translates to: LFSSEDVSSANPGGS*EEPSLPGPQGRLRS
Trigger: GGAGCGGAGTCTACCCTGGGGTCCAGGTAAAGAAGGTTCTTCCAAGGATCCACCTGGATTGGCTGAGGACACGTCCTCACTTGAAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS TCA 72 bp GTTGACACACCTCCTGGAGCGACTCTTCACACAGAATaGGAGCACCAGGTCTTGGGTCATATTCTGTGGCAG +
Preference number: 6 (lower is better)
Translates to: VDTPPGATLHTE*EHQVLGHILWQ
Trigger: CTGCCACAGAATATGACCCAAGACCTGGTGCTCTCATTCTGTGTGAAGAGTCGCTCCAGGAGGTGTGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS GCA 72 bp AGTTCTTGCTCATCGGGGAGCAAGAATCAAGATCGATaGTCCTGGTGGGGACAAAGCCCACTTCTCCTGAAC +
Preference number: 6 (lower is better)
Translates to: SSCSSGSKNQDR*SWWGQSPLLLN
Trigger: GTTCAGGAGAAGTGGGCTTTGTCCCCACCAGGAGCATCGATCTTGATTCTTGCTCCCCGATGAGCAAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 72 bp CTTGCACAGTGTCAAATATTCTCCTTCCTTGTCAGCTaGCTGAGCCACGGAGCACACGGCTCTGCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: LAQCQIFSFLVS*LSHGAHGSAEE
Trigger: TTCTTCTGCAGAGCCGTGTGCTCCGTGGCTCAGCCAGCTGACAAGGAAGGAGAATATTTGACACTGTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CCA 72 bp TCATCGGGGAGCAAGAATCAAGATCGATGCTCCTGGTaGGGACAAAGCCCACTTCTCCTGAACTCACTGACT +
Preference number: 6 (lower is better)
Translates to: SSGSKNQDRCSW*GQSPLLLNSLT
Trigger: AGTCAGTGAGTTCAGGAGAAGTGGGCTTTGTCCCCACCAGGAGCATCGATCTTGATTCTTGCTCCCCGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CCA 72 bp AGGTACATCTTAGACAGGATGAGACACAAGGTCCTCTaGATGTCCTGGTCACTCAGTTCCTCACAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: RYILDRMRHKVL*MSWSLSSSQAA
Trigger: GGCTGCCTGTGAGGAACTGAGTGACCAGGACATCCAGAGGACCTTGTGTCTCATCCTGTCTAAGATGTACCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CAA 72 bp GACACTTGGATCTCTGTGTCGTCCACCAGCCTGCTGTaGAGCCAGTACGTGTGGTCAAAGAAGAGATGTTCC +
Preference number: 6 (lower is better)
Translates to: DTWISVSSTSLL*SQYVWSKKRCS
Trigger: GGAACATCTCTTCTTTGACCACACGTACTGGCTCAACAGCAGGCTGGTGGACGACACAGAGATCCAAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CAA 90 bp GAGGCCCAGGTATATGTTTTCCAAGTGATTGTCATCCACAGACACTaGGATCTCTGTGTCGTCCACCAGCCTGCTGTTGAGCCAGTACGT +
Preference number: 6 (lower is better)
Translates to: EAQVYVFQVIVIHRH*DLCVVHQPAVEPVR
Trigger: ACGTACTGGCTCAACAGCAGGCTGGTGGACGACACAGAGATCCAAGTGTCTGTGGATGACAATCACTTGGAAAACATATACCTGGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS TCA 72 bp CTGGCTGACTGCTGCATACATGACTTGAGGGTCAAGTaGCCAAGATTGGCCATAGACACAGCCTGGTTACGT +
Preference number: 6 (lower is better)
Translates to: LADCCIHDLRVK*PRLAIDTAWLR
Trigger: ACGTAACCAGGCTGTGTCTATGGCCAATCTTGGTCACTTGACCCTCAAGTCATGTATGCAGCAGTCAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS TCA 72 bp GGGACACCGAGCTGTAGAAATGGCAGAGGGATTTGGTaGCCTGAAGTTGACTGCTTAGGTGTTGGTGCCTTA +
Preference number: 6 (lower is better)
Translates to: GTPSCRNGRGIW*PEVDCLGVGAL
Trigger: TAAGGCACCAACACCTAAGCAGTCAACTTCAGGTCACCAAATCCCTCTGCCATTTCTACAGCTCGGTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS GCA 72 bp GGCACTCTGGGGACCACGTTTTTGAACAGAGGCCACTaGGAGATGCGGAAGATACTTCTTGTCATACAGAGA +
Preference number: 6 (lower is better)
Translates to: GTLGTTFLNRGH*EMRKILLVIQR
Trigger: TCTCTGTATGACAAGAAGTATCTTCCGCATCTCGCAGTGGCCTCTGTTCAAAAACGTGGTCCCCAGAGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
ENSMUST00000236759.2
CDS CAA 90 bp TCATCCACAGACACTTGGATCTCTGTGTCGTCCACCAGCCTGCTGTaGAGCCAGTACGTGTGGTCAAAGAAGAGATGTTCCAGACATATG +
Preference number: 6 (lower is better)
Translates to: SSTDTWISVSSTSLL*SQYVWSKKRCSRHM
Trigger: CATATGTCTGGAACATCTCTTCTTTGACCACACGTACTGGCTCAACAGCAGGCTGGTGGACGACACAGAGATCCAAGTGTCTGTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CAA 72 bp GACTCGCCTCCAGAGAGCACGGAGATCAGCTCATTCTaGCACAGTGTCAAATATTCTCCTTCCTTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: DSPPESTEISSF*HSVKYSPSLSA
Trigger: AGCTGACAAGGAAGGAGAATATTTGACACTGTGCAAGAATGAGCTGATCTCCGTGCTCTCTGGAGGCGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CAA 90 bp AGCACCAGGTCTTGGGTCATATTCTGTGGCAGGAAACATTTTCTCTaGTTTTCAAGTGAGGACGTGTCCTCAGCCAATCCAGGTGGATCC +
Preference number: 6 (lower is better)
Translates to: STRSWVIFCGRKHFL*FSSEDVSSANPGGS
Trigger: GGATCCACCTGGATTGGCTGAGGACACGTCCTCACTTGAAAACAAGAGAAAATGTTTCCTGCCACAGAATATGACCCAAGACCTGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2
CDS CAA 72 bp TCTTGGGTCATATTCTGTGGCAGGAAACATTTTCTCTaGTTTTCAAGTGAGGACGTGTCCTCAGCCAATCCA +
Preference number: 6 (lower is better)
Translates to: SWVIFCGRKHFL*FSSEDVSSANP
Trigger: TGGATTGGCTGAGGACACGTCCTCACTTGAAAACAAGAGAAAATGTTTCCTGCCACAGAATATGACCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000051720.6
ENSMUST00000235652.2
ENSMUST00000235860.2