Pregenerated sensors for SH3RF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031642Ensembl transcript IDs: ENSMUST00000034060.7, ENSMUST00000209611.2
Found 323 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CACAGCCACTCCCAGCAAGCCTTGCCGAACAGTCCCAGGAGCGAGTaGTCTCCCAGAGCTCGCCCTTCACATCCGTCCGCTGGGAGGACA | + |
Preference number: 1 (lower is better) Translates to: HSHSQQALPNSPRSE*SPRARPSHPSAGRT Trigger: TGTCCTCCCAGCGGACGGATGTGAAGGGCGAGCTCTGGGAGACCACTCGCTCCTGGGACTGTTCGGCAAGGCTTGCTGGGAGTGGCTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CCA 90 bp | AGAGAGACGGAACCCACACAGGTGTGTCCTCCTTCCCTCTGCCCCTaGGGTAACCAGGCCGGGGCTCTGGAGTCAGGTGCCCATCTTCTG | + |
Preference number: 1 (lower is better) Translates to: RETEPTQVCPPSLCP*GNQAGALESGAHLL Trigger: CAGAAGATGGGCACCTGACTCCAGAGCCCCGGCCTGGTTACCCCAGGGGCAGAGGGAAGGAGGACACACCTGTGTGGGTTCCGTCTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR TCA 90 bp | ACAGCAAGAGCGCCAGACACTAGGCTGGCTGAGGTGGACGCTGCCTaGATTCAGGAGTTTGAGTCTAGCCAGGGCAGCATGAGGACACCG | + |
Preference number: 1 (lower is better) Translates to: TARAPDTRLAEVDAA*IQEFESSQGSMRTP Trigger: CGGTGTCCTCATGCTGCCCTGGCTAGACTCAAACTCCTGAATTCAGGCAGCGTCCACCTCAGCCAGCCTAGTGTCTGGCGCTCTTGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR CCA 90 bp | TATAAAAAGATGGGCTCAGCCAGACCCTACCACAATTGTAAGGTGTaGGCACAGCCACTCCCAGCAAGCCTTGCCGAACAGTCCCAGGAG | + |
Preference number: 1 (lower is better) Translates to: YKKMGSARPYHNCKV*AQPLPASLAEQSQE Trigger: CTCCTGGGACTGTTCGGCAAGGCTTGCTGGGAGTGGCTGTGCCCACACCTTACAATTGTGGTAGGGTCTGGCTGAGCCCATCTTTTTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR TCA 90 bp | CAGGCCGGGGCTCTGGAGTCAGGTGCCCATCTTCTGCTCGGTTCTTaGAGATCTGGAAGTCCACAGATGTGCTCTTTCTATGAAACTGCT | + |
Preference number: 1 (lower is better) Translates to: QAGALESGAHLLLGS*RSGSPQMCSFYETA Trigger: AGCAGTTTCATAGAAAGAGCACATCTGTGGACTTCCAGATCTTCAAGAACCGAGCAGAAGATGGGCACCTGACTCCAGAGCCCCGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR GCA 90 bp | ACACACCATGCACAGTCCACACCACTGTGGGAATCCGGTATCACATaGAAGATGGCGGAGAAATCACGATGGATGAGTGGAAACGTTCAC | + |
Preference number: 1 (lower is better) Translates to: THHAQSTPLWESGIT*KMAEKSRWMSGNVH Trigger: GTGAACGTTTCCACTCATCCATCGTGATTTCTCCGCCATCTTGCATGTGATACCGGATTCCCACAGTGGTGTGGACTGTGCATGGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR GCA 90 bp | CAGGGCAGCATGAGGACACCGTCACCAGCTCAGCAACAGAGAGAATaGCAACTGAAGGGAACATCTCTCCAAACTGGAAGTTTGTTTATC | + |
Preference number: 1 (lower is better) Translates to: QGSMRTPSPAQQQRE*QLKGTSLQTGSLFI Trigger: GATAAACAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCTCTGTTGCTGAGCTGGTGACGGTGTCCTCATGCTGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR CCA 90 bp | TGGGGTGGAATTGGAAGAGAGCATCAAAGGATGGATATAAAAAGATaGGCTCAGCCAGACCCTACCACAATTGTAAGGTGTGGGCACAGC | + |
Preference number: 1 (lower is better) Translates to: WGGIGREHQRMDIKR*AQPDPTTIVRCGHS Trigger: GCTGTGCCCACACCTTACAATTGTGGTAGGGTCTGGCTGAGCCCATCTTTTTATATCCATCCTTTGATGCTCTCTTCCAATTCCACCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CCA 90 bp | GCTGTCTTCCCTCTATCTGCTCTCAGGACTAGCCAGACCCACAGCTaGGGTGGAATTGGAAGAGAGCATCAAAGGATGGATATAAAAAGA | + |
Preference number: 1 (lower is better) Translates to: AVFPLSALRTSQTHS*GGIGREHQRMDIKR Trigger: TCTTTTTATATCCATCCTTTGATGCTCTCTTCCAATTCCACCCCAGCTGTGGGTCTGGCTAGTCCTGAGAGCAGATAGAGGGAAGACAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CCA 90 bp | GGCGCTGCTGCTTGTGCTAGCAGACAAACGCGTATTTCCAGTCAATaGTTGTGCTTTAGTTTGCGTCTTTCTTTACCCACTTCGTTTCAG | + |
Preference number: 1 (lower is better) Translates to: GAAACASRQTRISSQ*LCFSLRLSLPTSFQ Trigger: CTGAAACGAAGTGGGTAAAGAAAGACGCAAACTAAAGCACAACCATTGACTGGAAATACGCGTTTGTCTGCTAGCACAAGCAGCAGCGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CCA 90 bp | AAAATTGCTATGAAATACACACACCATGCACAGTCCACACCACTGTaGGAATCCGGTATCACATGCAAGATGGCGGAGAAATCACGATGG | + |
Preference number: 1 (lower is better) Translates to: KIAMKYTHHAQSTPL*ESGITCKMAEKSRW Trigger: CCATCGTGATTTCTCCGCCATCTTGCATGTGATACCGGATTCCCACAGTGGTGTGGACTGTGCATGGTGTGTGTATTTCATAGCAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR TCA 90 bp | GCTCGGTTCTTGAAGATCTGGAAGTCCACAGATGTGCTCTTTCTATaGAACTGCTTTGTGCTCTTTAGTCACACGTGGTGTGATGATAAG | + |
Preference number: 1 (lower is better) Translates to: ARFLKIWKSTDVLFL*NCFVLFSHTWCDDK Trigger: CTTATCATCACACCACGTGTGACTAAAGAGCACAAAGCAGTTTCATAGAAAGAGCACATCTGTGGACTTCCAGATCTTCAAGAACCGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR TCA 90 bp | TTCAAAGCCAAAATCGCTCTAAGAATGCTGATCATTCTGAGTCTATaGACCAAGAAAGCCATGGGAACCTACGCTGTGTTCTGTCTCAGG | + |
Preference number: 1 (lower is better) Translates to: FKAKIALRMLIILSL*TKKAMGTYAVFCLR Trigger: CCTGAGACAGAACACAGCGTAGGTTCCCATGGCTTTCTTGGTTCATAGACTCAGAATGATCAGCATTCTTAGAGCGATTTTGGCTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR GCA 90 bp | AGATCTGGAAGTCCACAGATGTGCTCTTTCTATGAAACTGCTTTGTaGTCTTTAGTCACACGTGGTGTGATGATAAGCTTTCTCCGTGTC | + |
Preference number: 1 (lower is better) Translates to: RSGSPQMCSFYETAL*SLVTRGVMISFLRV Trigger: GACACGGAGAAAGCTTATCATCACACCACGTGTGACTAAAGAGCACAAAGCAGTTTCATAGAAAGAGCACATCTGTGGACTTCCAGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR GCA 90 bp | GCTGCTTGTGCTAGCAGACAAACGCGTATTTCCAGTCAATGGTTGTaGTTTAGTTTGCGTCTTTCTTTACCCACTTCGTTTCAGGAAAAT | + |
Preference number: 1 (lower is better) Translates to: AACASRQTRISSQWL*FSLRLSLPTSFQEN Trigger: ATTTTCCTGAAACGAAGTGGGTAAAGAAAGACGCAAACTAAAGCACAACCATTGACTGGAAATACGCGTTTGTCTGCTAGCACAAGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CCA 90 bp | TCAGCAACAGAGAGAATGCCAACTGAAGGGAACATCTCTCCAAACTaGAAGTTTGTTTATCTTCTACAATTCAAGTCTAGAGGGAACAGC | + |
Preference number: 1 (lower is better) Translates to: SATERMPTEGNISPN*KFVYLLQFKSRGNS Trigger: GCTGTTCCCTCTAGACTTGAATTGTAGAAGATAAACAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCTCTGTTGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR GCA 90 bp | CTAGCAGACAAACGCGTATTTCCAGTCAATGGTTGTGCTTTAGTTTaGGTCTTTCTTTACCCACTTCGTTTCAGGAAAATGAAAAACCCA | + |
Preference number: 1 (lower is better) Translates to: LADKRVFPVNGCALV*VFLYPLRFRKMKNP Trigger: TGGGTTTTTCATTTTCCTGAAACGAAGTGGGTAAAGAAAGACGCAAACTAAAGCACAACCATTGACTGGAAATACGCGTTTGTCTGCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CCA 90 bp | GGAATGATTCCACTTCTAGCCACATTACGTATCTCTTTAAGACAATaGGATCTCTTGCCATTCTGTGACTCTTCAGTTCATGTCAATATT | + |
Preference number: 1 (lower is better) Translates to: GMIPLLATLRISLRQ*DLLPFCDSSVHVNI Trigger: AATATTGACATGAACTGAAGAGTCACAGAATGGCAAGAGATCCCATTGTCTTAAAGAGATACGTAATGTGGCTAGAAGTGGAATCATTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CAA 90 bp | CCTACCACAATTGTAAGGTGTGGGCACAGCCACTCCCAGCAAGCCTaGCCGAACAGTCCCAGGAGCGAGTGGTCTCCCAGAGCTCGCCCT | + |
Preference number: 2 (lower is better) Translates to: PTTIVRCGHSHSQQA*PNSPRSEWSPRARP Trigger: AGGGCGAGCTCTGGGAGACCACTCGCTCCTGGGACTGTTCGGCAAGGCTTGCTGGGAGTGGCTGTGCCCACACCTTACAATTGTGGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR-3UTR GCA 90 bp | CACTCACACACAGAGACTACCACTTTCTCTCACTTCCCACGGCGCTGCTGCTTGCCTCTACCTGGAGTCTaGCGGCTCCCCTCCCCAGGT | + |
Preference number: 2 (lower is better) Translates to: HSHTETTTFSHFPRRCCLPLPGV*RLPSPG Trigger: ACCTGGGGAGGGGAGCCGGCAGACTCCAGGTAGAGG...CAAGCAGCAGCGCCGTGGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR-3UTR GCA 90 bp | TACACACACCATGCACAGTCCACACCACTGTGGGAATCCGGTATCACATGCAAGTGTCCTCCTTCCCTCTaGCCCTGGGGTAACCAGGCC | + |
Preference number: 2 (lower is better) Translates to: YTHHAQSTPLWESGITCKCPPSL*PWGNQA Trigger: GGCCTGGTTACCCCAGGGGCAGAGGGAAGGAGGACA...CTTGCATGTGATACCGGATTCCCACAGTGGTGTGGACTGTGCATGGTGTGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR-3UTR CCA 90 bp | TTAACCAGCGTTATACCAGGAAGCTATTACCACGGATACTTCAATCACATAGCTCCTTCCCTCTGCCCCTaGGGTAACCAGGCCGGGGCT | + |
Preference number: 2 (lower is better) Translates to: LTSVIPGSYYHGYFNHIAPSLCP*GNQAGA Trigger: AGCCCCGGCCTGGTTACCCCAGGGGCAGAGGGAAGG...AGCTATGTGATTGAAGTATCCGTGGTAATAGCTTCCTGGTATAACGCTGGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR-3UTR TCA 90 bp | AAGCCACTCACACACAGAGACTACCACTTTCTCTCACTTCCCACGGCGCTGCTGCTTCAGGTTGATTTCTaGTCAAAGCAGACAGATGGG | + |
Preference number: 2 (lower is better) Translates to: KPLTHRDYHFLSLPTALLLQVDF*SKQTDG Trigger: CCCATCTGTCTGCTTTGATCAGAAATCAACCTGAAG...CAGCAGCGCCGTGGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR-3UTR GCA 90 bp | CACTCACACACAGAGACTACCACTTTCTCTCACTTCCCACGGCGCTGCTGCTTGTATGAAACTGCTTTGTaGTCTTTAGTCACACGTGGT | + |
Preference number: 2 (lower is better) Translates to: HSHTETTTFSHFPRRCCLYETAL*SLVTRG Trigger: ACCACGTGTGACTAAAGAGCACAAAGCAGTTTCATA...CAAGCAGCAGCGCCGTGGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR-3UTR TCA 90 bp | GGAGCAAACATACTTAAGACATCTCGGTCAGTAGTGGTGGTGGTGGTGGGGGCAGATGTGCTCTTTCTATaGAACTGCTTTGTGCTCTTT | + |
Preference number: 2 (lower is better) Translates to: GANILKTSRSVVVVVVGADVLFL*NCFVLF Trigger: AAAGAGCACAAAGCAGTTTCATAGAAAGAGCACATC...TGCCCCCACCACCACCACCACTACTGACCGAGATGTCTTAAGTATGTTTGCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR-3UTR GCA 90 bp | CTGAGAACACAATGGACACGGAGGAACAGAAGGATCTCTGTGTTGGGAGGGAACCCTCTGCAAAAACAGTaGATGCTTTTAACTGCTGAG | + |
Preference number: 2 (lower is better) Translates to: LRTQWTRRNRRISVLGGNPLQKQ*MLLTAE Trigger: CTCAGCAGTTAAAAGCATGCACTGTTTTTGCAGAGG...GTTCCCTCCCAACACAGAGATCCTTCTGTTCCTCCGTGTCCATTGTGTTCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR-3UTR GCA 90 bp | AAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCAACAGATGGCTCTGGAGTCAGGTaGCCATCTTCTGCTCGGTTC | + |
Preference number: 2 (lower is better) Translates to: KSPIQNPHIISPSDLPTDGSGVR*PSSARF Trigger: GAACCGAGCAGAAGATGGGCACCTGACTCCAGAGCC...ATCTGTTGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CAA 90 bp | TTACTGAGAACACAATGGACACGGAGGAACAGAAGGATCTCTGTGTaGGGAGGGAACATTTTTAGGGTAACATGTCATTTCAAAGCTGGC | + |
Preference number: 2 (lower is better) Translates to: LLRTQWTRRNRRISV*GGNIFRVTCHFKAG Trigger: GCCAGCTTTGAAATGACATGTTACCCTAAAAATGTTCCCTCCCAACACAGAGATCCTTCTGTTCCTCCGTGTCCATTGTGTTCTCAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR-3UTR CCA 90 bp | ACAGAACAGAGATTTCAATGCGCTCACTGCATGCTGCTTCCTCGGGTAATGAGTTTCCAGTTTTCCTCCTaGCAGATACTTGTCTTAGTA | + |
Preference number: 2 (lower is better) Translates to: TEQRFQCAHCMLLPRVMSFQFSS*QILVLV Trigger: TACTAAGACAAGTATCTGCCAGGAGGAAAACTGGAA...ACTCATTACCCGAGGAAGCAGCATGCAGTGAGCGCATTGAAATCTCTGTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR-3UTR GCA 90 bp | GAGTGCATCTCTTACCACCACTGTCTCACAAACTTTTACTGTGTCTTGGGGCATTCAAAAAGAATCTCTTaGTCTCAACAGACAGGAGAG | + |
Preference number: 2 (lower is better) Translates to: ECISYHHCLTNFYCVLGHSKRIS*SQQTGE Trigger: CTCTCCTGTCTGTTGAGAGCAAGAGATTCTTTTTGA...ATGCCCCAAGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAGAGATGCACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CAA 90 bp | CAGAGAGAATGCCAACTGAAGGGAACATCTCTCCAAACTGGAAGTTaGTTTATCTTCTACAATTCAAGTCTAGAGGGAACAGCGTGTACA | + |
Preference number: 2 (lower is better) Translates to: QRECQLKGTSLQTGS*FIFYNSSLEGTACT Trigger: TGTACACGCTGTTCCCTCTAGACTTGAATTGTAGAAGATAAACAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR-3UTR CCA 90 bp | GAGTGCATCTCTTACCACCACTGTCTCACAAACTTTTACTGTGTCTTGGGGCATATTCAGCTGTCTGTTTaGAAAACTGGCATTTTTGTC | + |
Preference number: 2 (lower is better) Translates to: ECISYHHCLTNFYCVLGHIQLSV*KTGIFV Trigger: GACAAAAATGCCAGTTTTCCAAACAGACAGCTGAAT...ATGCCCCAAGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAGAGATGCACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CAA 90 bp | CCACTTCTAGCCACATTACGTATCTCTTTAAGACAATGGGATCTCTaGCCATTCTGTGACTCTTCAGTTCATGTCAATATTTCCCAGCTA | + |
Preference number: 2 (lower is better) Translates to: PLLATLRISLRQWDL*PFCDSSVHVNISQL Trigger: TAGCTGGGAAATATTGACATGAACTGAAGAGTCACAGAATGGCAAGAGATCCCATTGTCTTAAAGAGATACGTAATGTGGCTAGAAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR-3UTR TCA 90 bp | GGGAACATTTTTAGGGTAACATGTCATTTCAAAGCTGGCTTAATATCAGTCAGAATGGATGTGTGCACATaGACGCAGGTAACCAAAGAG | + |
Preference number: 2 (lower is better) Translates to: GNIFRVTCHFKAGLISVRMDVCT*TQVTKE Trigger: CTCTTTGGTTACCTGCGTTCATGTGCACACATCCAT...TCTGACTGATATTAAGCCAGCTTTGAAATGACATGTTACCCTAAAAATGTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR-3UTR CCA 90 bp | AAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCAACAGATGCGGAGAAATCACGATaGATGAGTGGAAACGTTCAC | + |
Preference number: 2 (lower is better) Translates to: KSPIQNPHIISPSDLPTDAEKSR*MSGNVH Trigger: GTGAACGTTTCCACTCATCCATCGTGATTTCTCCGC...ATCTGTTGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR-3UTR CCA 90 bp | AAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCAACAGATCAGCTGGGGTGGAATTaGAAGAGAGCATCAAAGGAT | + |
Preference number: 2 (lower is better) Translates to: KSPIQNPHIISPSDLPTDQLGWN*KRASKD Trigger: ATCCTTTGATGCTCTCTTCCAATTCCACCCCAGCTG...ATCTGTTGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR-3UTR CCA 90 bp | TCTCCAAAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCAGTCTGTTTGGAAAACTaGCATTTTTGTCTAAACGGA | + |
Preference number: 2 (lower is better) Translates to: SPKSPIQNPHIISPSDLPVCLEN*HFCLNG Trigger: TCCGTTTAGACAAAAATGCCAGTTTTCCAAACAGAC...TGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTTTGGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR GCA 72 bp | GAGACGGAACCCACACAGGTGTGTCCTCCTTCCCTCTaGCCCTGGGGTAACCAGGCCGGGGCTCTGGAGTCA | + |
Preference number: 3 (lower is better) Translates to: ETEPTQVCPPSL*PWGNQAGALES Trigger: TGACTCCAGAGCCCCGGCCTGGTTACCCCAGGGGCAGAGGGAAGGAGGACACACCTGTGTGGGTTCCGTCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CCA 72 bp | ATGGGCTCAGCCAGACCCTACCACAATTGTAAGGTGTaGGCACAGCCACTCCCAGCAAGCCTTGCCGAACAG | + |
Preference number: 3 (lower is better) Translates to: MGSARPYHNCKV*AQPLPASLAEQ Trigger: CTGTTCGGCAAGGCTTGCTGGGAGTGGCTGTGCCCACACCTTACAATTGTGGTAGGGTCTGGCTGAGCCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR GCA 72 bp | ACCAGGCCGGGGCTCTGGAGTCAGGTGCCCATCTTCTaGTCGGTTCTTGAAGATCTGGAAGTCCACAGATGT | + |
Preference number: 3 (lower is better) Translates to: TRPGLWSQVPIF*SVLEDLEVHRC Trigger: ACATCTGTGGACTTCCAGATCTTCAAGAACCGAGCAGAAGATGGGCACCTGACTCCAGAGCCCCGGCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR TCA 72 bp | CACATGAACGCAGGTAACCAAAGAGGCCACAGGCAGTaGTTGCCCTGGGACTGGAGACTGAACTTGGGTCCT | + |
Preference number: 3 (lower is better) Translates to: HMNAGNQRGHRQ*LPWDWRLNLGP Trigger: AGGACCCAAGTTCAGTCTCCAGTCCCAGGGCAATCACTGCCTGTGGCCTCTTTGGTTACCTGCGTTCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR TCA 72 bp | GAGGCCACAGGCAGTGATTGCCCTGGGACTGGAGACTaGACTTGGGTCCTCTGCAAAAACAGTGCATGCTTT | + |
Preference number: 3 (lower is better) Translates to: EATGSDCPGTGD*TWVLCKNSACF Trigger: AAAGCATGCACTGTTTTTGCAGAGGACCCAAGTTCAGTCTCCAGTCCCAGGGCAATCACTGCCTGTGGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR TCA 72 bp | CCTGAATTCAGGAGTTTGAGTCTAGCCAGGGCAGCATaGGGACACCGTCACCAGCTCAGCAACAGAGAGAAT | + |
Preference number: 3 (lower is better) Translates to: PEFRSLSLARAA*GHRHQLSNREN Trigger: ATTCTCTCTGTTGCTGAGCTGGTGACGGTGTCCTCATGCTGCCCTGGCTAGACTCAAACTCCTGAATTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR GCA 72 bp | GCACAGTCCACACCACTGTGGGAATCCGGTATCACATaGAAGATGGCGGAGAAATCACGATGGATGAGTGGA | + |
Preference number: 3 (lower is better) Translates to: AQSTPLWESGIT*KMAEKSRWMSG Trigger: TCCACTCATCCATCGTGATTTCTCCGCCATCTTGCATGTGATACCGGATTCCCACAGTGGTGTGGACTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CCA 72 bp | CCTCTATCTGCTCTCAGGACTAGCCAGACCCACAGCTaGGGTGGAATTGGAAGAGAGCATCAAAGGATGGAT | + |
Preference number: 3 (lower is better) Translates to: PLSALRTSQTHS*GGIGREHQRMD Trigger: ATCCATCCTTTGATGCTCTCTTCCAATTCCACCCCAGCTGTGGGTCTGGCTAGTCCTGAGAGCAGATAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CCA 72 bp | AAACGACCATTTCCTAGCAAGACTACAAGTCAGGCATaGTGGTGCACAGCAAGAGCGCCAGACACTAGGCTG | + |
Preference number: 3 (lower is better) Translates to: KRPFPSKTTSQA*WCTARAPDTRL Trigger: CAGCCTAGTGTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACTTGTAGTCTTGCTAGGAAATGGTCGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR TCA 72 bp | TCACTGCATGCTGCTTCCTCGGGTAATGAGTCGCAGTaGACTTTCCAGTTTTCCTCCTGGCAGATACTTGTC | + |
Preference number: 3 (lower is better) Translates to: SLHAASSGNESQ*TFQFSSWQILV Trigger: GACAAGTATCTGCCAGGAGGAAAACTGGAAAGTTCACTGCGACTCATTACCCGAGGAAGCAGCATGCAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR GCA 72 bp | ATGAGGACACCGTCACCAGCTCAGCAACAGAGAGAATaGCAACTGAAGGGAACATCTCTCCAAACTGGAAGT | + |
Preference number: 3 (lower is better) Translates to: MRTPSPAQQQRE*QLKGTSLQTGS Trigger: ACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCTCTGTTGCTGAGCTGGTGACGGTGTCCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR GCA 72 bp | GACTGGAGACTGAACTTGGGTCCTCTGCAAAAACAGTaGATGCTTTTAACTGCTGAGTCAGCTCTCCAGCCT | + |
Preference number: 3 (lower is better) Translates to: DWRLNLGPLQKQ*MLLTAESALQP Trigger: AGGCTGGAGAGCTGACTCAGCAGTTAAAAGCATGCACTGTTTTTGCAGAGGACCCAAGTTCAGTCTCCAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
||
3UTR GCA 72 bp | GAGGGGGAGATGCAGTCTATGTCAAAAAGAATCTCTTaGTCTCAACAGACAGGAGAGAACCCAGCTTCTCCT | + |
Preference number: 3 (lower is better) Translates to: EGEMQSMSKRIS*SQQTGENPASP Trigger: AGGAGAAGCTGGGTTCTCTCCTGTCTGTTGAGAGCAAGAGATTCTTTTTGACATAGACTGCATCTCCCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
||
3UTR CCA 72 bp | ATGAAATACACACACCATGCACAGTCCACACCACTGTaGGAATCCGGTATCACATGCAAGATGGCGGAGAAA | + |
Preference number: 3 (lower is better) Translates to: MKYTHHAQSTPL*ESGITCKMAEK Trigger: TTTCTCCGCCATCTTGCATGTGATACCGGATTCCCACAGTGGTGTGGACTGTGCATGGTGTGTGTATTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
||
3UTR-3UTR CAA 90 bp | GTGTGCTGGCTAACGTGTGCCTTCACCCGAGAGGGAGCAAACATACTTAAGACAGATTCAGCTGTCTGTTaGGAAAACTGGCATTTTTGT | + |
Preference number: 3 (lower is better) Translates to: VCWLTCAFTREGANILKTDSAVC*ENWHFC Trigger: ACAAAAATGCCAGTTTTCCAAACAGACAGCTGAATC...TGTCTTAAGTATGTTTGCTCCCTCTCGGGTGAAGGCACACGTTAGCCAGCACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR TCA 72 bp | CACCGTCACCAGCTCAGCAACAGAGAGAATGCCAACTaGAGGGAACATCTCTCCAAACTGGAAGTTTGTTTA | + |
Preference number: 3 (lower is better) Translates to: HRHQLSNRENAN*REHLSKLEVCL Trigger: TAAACAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCTCTGTTGCTGAGCTGGTGACGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
||
3UTR-3UTR CAA 90 bp | CACACCACTGTGGGAATCCGGTATCACATGCAAGATGGCGGAGAAATCACGATGTTTTCTTACAGCCTTTaGACTTTAACACGAGTGCAT | + |
Preference number: 3 (lower is better) Translates to: HTTVGIRYHMQDGGEITMFSYSL*TLTRVH Trigger: ATGCACTCGTGTTAAAGTCAAAAGGCTGTAAGAAAA...CATCGTGATTTCTCCGCCATCTTGCATGTGATACCGGATTCCCACAGTGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
||
3UTR GCA 72 bp | TATAGGAAAACAGAACAGAGATTTCAATGCGCTCACTaGATGCTGCTTCCTCGGGTAATGAGTCGCAGTGAA | + |
Preference number: 3 (lower is better) Translates to: YRKTEQRFQCAH*MLLPRVMSRSE Trigger: TTCACTGCGACTCATTACCCGAGGAAGCAGCATGCAGTGAGCGCATTGAAATCTCTGTTCTGTTTTCCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR CCA 72 bp | TCCGGTATCACATGCAAGATGGCGGAGAAATCACGATaGATGAGTGGAAACGTTCACAGTGTTTTCTTACAG | + |
Preference number: 3 (lower is better) Translates to: SGITCKMAEKSR*MSGNVHSVFLQ Trigger: CTGTAAGAAAACACTGTGAACGTTTCCACTCATCCATCGTGATTTCTCCGCCATCTTGCATGTGATACCGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
||
3UTR CCA 72 bp | AGTAACAACAATGTATGGCTGCGGGTCACCATAGCATaGGGAACTGTATTAAAGGGTCTCAGCACTAAGAAG | + |
Preference number: 3 (lower is better) Translates to: SNNNVWLRVTIA*GTVLKGLSTKK Trigger: CTTCTTAGTGCTGAGACCCTTTAATACAGTTCCCCATGCTATGGTGACCCGCAGCCATACATTGTTGTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
||
3UTR TCA 72 bp | GTATCACATGCAAGATGGCGGAGAAATCACGATGGATaGGTGGAAACGTTCACAGTGTTTTCTTACAGCCTT | + |
Preference number: 3 (lower is better) Translates to: VSHARWRRNHDG*VETFTVFSYSL Trigger: AAGGCTGTAAGAAAACACTGTGAACGTTTCCACTCATCCATCGTGATTTCTCCGCCATCTTGCATGTGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CCA 72 bp | CTTCCCGGTACTGATTCAGCTGTCTGTTTGGAAAACTaGCATTTTTGTCTAAACGGAGCCAAATATAACGGC | + |
Preference number: 3 (lower is better) Translates to: LPGTDSAVCLEN*HFCLNGAKYNG Trigger: GCCGTTATATTTGGCTCCGTTTAGACAAAAATGCCAGTTTTCCAAACAGACAGCTGAATCAGTACCGGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
||
3UTR CCA 72 bp | GCTTGTGCTAGCAGACAAACGCGTATTTCCAGTCAATaGTTGTGCTTTAGTTTGCGTCTTTCTTTACCCACT | + |
Preference number: 3 (lower is better) Translates to: ACASRQTRISSQ*LCFSLRLSLPT Trigger: AGTGGGTAAAGAAAGACGCAAACTAAAGCACAACCATTGACTGGAAATACGCGTTTGTCTGCTAGCACAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
||
3UTR-3UTR CAA 90 bp | TTAACCAGCGTTATACCAGGAAGCTATTACCACGGATACTTCAATCACATAGCTTCTTCTGCTCGGTTCTaGAAGATCTGGAAGTCCACA | + |
Preference number: 3 (lower is better) Translates to: LTSVIPGSYYHGYFNHIASSARF*KIWKST Trigger: TGTGGACTTCCAGATCTTCAAGAACCGAGCAGAAGA...AGCTATGTGATTGAAGTATCCGTGGTAATAGCTTCCTGGTATAACGCTGGTTAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
||
3UTR TCA 72 bp | TTGAAGATCTGGAAGTCCACAGATGTGCTCTTTCTATaGAACTGCTTTGTGCTCTTTAGTCACACGTGGTGT | + |
Preference number: 3 (lower is better) Translates to: LKIWKSTDVLFL*NCFVLFSHTWC Trigger: ACACCACGTGTGACTAAAGAGCACAAAGCAGTTTCATAGAAAGAGCACATCTGTGGACTTCCAGATCTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
||
3UTR TCA 72 bp | AAAATCGCTCTAAGAATGCTGATCATTCTGAGTCTATaGACCAAGAAAGCCATGGGAACCTACGCTGTGTTC | + |
Preference number: 3 (lower is better) Translates to: KIALRMLIILSL*TKKAMGTYAVF Trigger: GAACACAGCGTAGGTTCCCATGGCTTTCTTGGTTCATAGACTCAGAATGATCAGCATTCTTAGAGCGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR GCA 72 bp | GCTAGCAGACAAACGCGTATTTCCAGTCAATGGTTGTaGTTTAGTTTGCGTCTTTCTTTACCCACTTCGTTT | + |
Preference number: 3 (lower is better) Translates to: ASRQTRISSQWL*FSLRLSLPTSF Trigger: AAACGAAGTGGGTAAAGAAAGACGCAAACTAAAGCACAACCATTGACTGGAAATACGCGTTTGTCTGCTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR TCA 72 bp | AAAAGAAATCCAGGATTAGGTCTTCAGGTTGATTTCTaGTCAAAGCAGACAGATGGGGACCTACTAACTCCT | + |
Preference number: 3 (lower is better) Translates to: KRNPGLGLQVDF*SKQTDGDLLTP Trigger: AGGAGTTAGTAGGTCCCCATCTGTCTGCTTTGATCAGAAATCAACCTGAAGACCTAATCCTGGATTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR GCA 72 bp | TGTTTATGTTATAGGAAAACAGAACAGAGATTTCAATaGGCTCACTGCATGCTGCTTCCTCGGGTAATGAGT | + |
Preference number: 3 (lower is better) Translates to: CLCYRKTEQRFQ*AHCMLLPRVMS Trigger: ACTCATTACCCGAGGAAGCAGCATGCAGTGAGCGCATTGAAATCTCTGTTCTGTTTTCCTATAACATAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR-3UTR CAA 90 bp | TTAACCAGCGTTATACCAGGAAGCTATTACCACGGATACTTCAATCACATAGCTGTCAAAAAGAATCTCTaGCTCTCAACAGACAGGAGA | + |
Preference number: 3 (lower is better) Translates to: LTSVIPGSYYHGYFNHIAVKKNL*LSTDRR Trigger: TCTCCTGTCTGTTGAGAGCAAGAGATTCTTTTTGAC...AGCTATGTGATTGAAGTATCCGTGGTAATAGCTTCCTGGTATAACGCTGGTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR GCA 72 bp | AAACGCGTATTTCCAGTCAATGGTTGTGCTTTAGTTTaGGTCTTTCTTTACCCACTTCGTTTCAGGAAAATG | + |
Preference number: 3 (lower is better) Translates to: KRVFPVNGCALV*VFLYPLRFRKM Trigger: CATTTTCCTGAAACGAAGTGGGTAAAGAAAGACGCAAACTAAAGCACAACCATTGACTGGAAATACGCGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | AGTCAGGCATGGTGGTGCACAGCAAGAGCGCCAGACACTAGGCTGGCTGAGGTGTGGGAGGCCAGAGAATaGTGGGGCAGGCCCACGGAT | + |
Preference number: 4 (lower is better) Translates to: SQAWWCTARAPDTRLAEVWEARE*WGRPTD Trigger: ATCCGTGGGCCTGCCCCATCATTCTCTGGCCTCCCA...CACCTCAGCCAGCCTAGTGTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | AGTCAGGCATGGTGGTGCACAGCAAGAGCGCCAGACACTAGGCTGGCTGAGGTGCCAGGGAGCTTGTCTTaGGGTGGAAGGCATCCTGGG | + |
Preference number: 4 (lower is better) Translates to: SQAWWCTARAPDTRLAEVPGSLS*GGRHPG Trigger: CCCAGGATGCCTTCCACCGCAAGACAAGCTCCCTGG...CACCTCAGCCAGCCTAGTGTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | CCAGGGCAGCATGAGGACACCGTCACCAGCTCAGCAACAGAGAGAATGCCAACTGCAGGCCTGGCGAGGTaGTGGAGCAATGGGCACTGC | + |
Preference number: 4 (lower is better) Translates to: PGQHEDTVTSSATERMPTAGLAR*WSNGHC Trigger: GCAGTGCCCATTGCTCCACCACCTCGCCAGGCCTGC...AGTTGGCATTCTCTCTGTTGCTGAGCTGGTGACGGTGTCCTCATGCTGCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR TCA 90 bp | AGGGGCAGGGGCAGGGAAGAGATCGCTGTGTATGTTAAACCTCCTGTTATCGGTGCCGGGCCTCATTCATaGCTGGGCCCAGGGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: RGRGREEIAVYVKPPVIGAGPHS*LGPGRS Trigger: GCTCCTCCCTGGGCCCAGTCATGAATGAGGCCCGGC...ACCGATAACAGGAGGTTTAACATACACAGCGATCTCTTCCCTGCCCCTGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CAA 72 bp | ATTGTAAGGTGTGGGCACAGCCACTCCCAGCAAGCCTaGCCGAACAGTCCCAGGAGCGAGTGGTCTCCCAGA | + |
Preference number: 4 (lower is better) Translates to: IVRCGHSHSQQA*PNSPRSEWSPR Trigger: TCTGGGAGACCACTCGCTCCTGGGACTGTTCGGCAAGGCTTGCTGGGAGTGGCTGTGCCCACACCTTACAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | GGAGCAAACATACTTAAGACATCTCGGTCAGTAGTGGTGGTGGTGGTGGGGGCAAGCAGCAGTAGCGCCTaGCGGGGTGGAGGCGAGTAC | + |
Preference number: 4 (lower is better) Translates to: GANILKTSRSVVVVVVGASSSSA*RGGGEY Trigger: GTACTCGCCTCCACCCCGTCAGGCGCTACTGCTGCT...TGCCCCCACCACCACCACCACTACTGACCGAGATGTCTTAAGTATGTTTGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | AGTCAGGCATGGTGGTGCACAGCAAGAGCGCCAGACACTAGGCTGGCTGAGGTGACAGCATTGCGGGCCTaGTTGACTGTCATCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: SQAWWCTARAPDTRLAEVTALRA*LTVICP Trigger: TGGGCAGATGACAGTCAATCAGGCCCGCAATGCTGT...CACCTCAGCCAGCCTAGTGTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR TCA 90 bp | GACACCGTCACCAGCTCAGCAACAGAGAGAATGCCAACTGAAGGGAACATCTCTGCCGGGCCTCATTCATaGCTGGGCCCAGGGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: DTVTSSATERMPTEGNISAGPHS*LGPGRS Trigger: GCTCCTCCCTGGGCCCAGTCATGAATGAGGCCCGGC...AGAGATGTTCCCTTCAGTTGGCATTCTCTCTGTTGCTGAGCTGGTGACGGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | AGTCAGGCATGGTGGTGCACAGCAAGAGCGCCAGACACTAGGCTGGCTGAGGTGTCTGCACGAAGTTGGTaGGGAAAAAGCCGTGGACCC | + |
Preference number: 4 (lower is better) Translates to: SQAWWCTARAPDTRLAEVSARSW*GKSRGP Trigger: GGGTCCACGGCTTTTTCCCCACCAACTTCGTGCAGA...CACCTCAGCCAGCCTAGTGTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | GTGTGCTGGCTAACGTGTGCCTTCACCCGAGAGGGAGCAAACATACTTAAGACATGGAGGCGAGTACGGTaGCCGCCAGGAGAGGGGGTG | + |
Preference number: 4 (lower is better) Translates to: VCWLTCAFTREGANILKTWRRVR*PPGEGV Trigger: CACCCCCTCTCCTGGCGGCCACCGTACTCGCCTCCA...TGTCTTAAGTATGTTTGCTCCCTCTCGGGTGAAGGCACACGTTAGCCAGCACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | CACAATTGTAAGGTGTGGGCACAGCCACTCCCAGCAAGCCTTGCCGAACAGTCCGCCGTGGGGCGTTCCTaGCTATGTGCTGCAACTGTC | + |
Preference number: 4 (lower is better) Translates to: HNCKVWAQPLPASLAEQSAVGRS*LCAATV Trigger: GACAGTTGCAGCACATAGCCAGGAACGCCCCACGGC...GGACTGTTCGGCAAGGCTTGCTGGGAGTGGCTGTGCCCACACCTTACAATTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | CACTCACACACAGAGACTACCACTTTCTCTCACTTCCCACGGCGCTGCTGCTTGCACATCCAGGGTAGGTaGTGCTGGAGGGGAGACTCG | + |
Preference number: 4 (lower is better) Translates to: HSHTETTTFSHFPRRCCLHIQGR*CWRGDS Trigger: CGAGTCTCCCCTCCAGCATCACCTACCCTGGATGTG...CAAGCAGCAGCGCCGTGGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | CACAATTGTAAGGTGTGGGCACAGCCACTCCCAGCAAGCCTTGCCGAACAGTCCGGAGGATGGTCACTGTaGGACCACTGGGCTCTGTCT | + |
Preference number: 4 (lower is better) Translates to: HNCKVWAQPLPASLAEQSGGWSL*DHWALS Trigger: AGACAGAGCCCAGTGGTCGCACAGTGACCATCCTCC...GGACTGTTCGGCAAGGCTTGCTGGGAGTGGCTGTGCCCACACCTTACAATTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | GGAGCAAACATACTTAAGACATCTCGGTCAGTAGTGGTGGTGGTGGTGGGGGCAGGGAGACTCGGGGCTTaGGTTTGGTGGAGGCACCAG | + |
Preference number: 4 (lower is better) Translates to: GANILKTSRSVVVVVVGAGRLGA*VWWRHQ Trigger: CTGGTGCCTCCACCAAACGCAAGCCCCGAGTCTCCC...TGCCCCCACCACCACCACCACTACTGACCGAGATGTCTTAAGTATGTTTGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | GGAGCAAACATACTTAAGACATCTCGGTCAGTAGTGGTGGTGGTGGTGGGGGCAATGTGTTTGTGCAGGTaGTCCCGCCGCCCCCACCAG | + |
Preference number: 4 (lower is better) Translates to: GANILKTSRSVVVVVVGAMCLCR*SRRPHQ Trigger: CTGGTGGGGGCGGCGGGACCACCTGCACAAACACAT...TGCCCCCACCACCACCACCACTACTGACCGAGATGTCTTAAGTATGTTTGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | GCAGTGATTGCCCTGGGACTGGAGACTGAACTTGGGTCCTCTGCAAAAACAGTGATGTGTTTGTGCAGGTaGTCCCGCCGCCCCCACCAG | + |
Preference number: 4 (lower is better) Translates to: AVIALGLETELGSSAKTVMCLCR*SRRPHQ Trigger: CTGGTGGGGGCGGCGGGACCACCTGCACAAACACAT...CACTGTTTTTGCAGAGGACCCAAGTTCAGTCTCCAGTCCCAGGGCAATCACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | GGAGCAAACATACTTAAGACATCTCGGTCAGTAGTGGTGGTGGTGGTGGGGGCAAGCAGGACCCGCCATTaGAGGCAGAGGTTGGGAGGC | + |
Preference number: 4 (lower is better) Translates to: GANILKTSRSVVVVVVGASRTRH*RQRLGG Trigger: GCCTCCCAACCTCTGCCTCCAATGGCGGGTCCTGCT...TGCCCCCACCACCACCACCACTACTGACCGAGATGTCTTAAGTATGTTTGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | GCAGTGATTGCCCTGGGACTGGAGACTGAACTTGGGTCCTCTGCAAAAACAGTGGAGGTGGTGGAGCAATaGGCACTGCGGAGTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: AVIALGLETELGSSAKTVEVVEQ*ALRSPG Trigger: CCCTGGACTCCGCAGTGCCCATTGCTCCACCACCTC...CACTGTTTTTGCAGAGGACCCAAGTTCAGTCTCCAGTCCCAGGGCAATCACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR TCA 90 bp | CACAATTGTAAGGTGTGGGCACAGCCACTCCCAGCAAGCCTTGCCGAACAGTCCGGACTTGTCTGGATATaGGCTGCTGACACCACAGCC | + |
Preference number: 4 (lower is better) Translates to: HNCKVWAQPLPASLAEQSGLVWI*AADTTA Trigger: GGCTGTGGTGTCAGCAGCTCATATCCAGACAAGTCC...GGACTGTTCGGCAAGGCTTGCTGGGAGTGGCTGTGCCCACACCTTACAATTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | GGAGCAAACATACTTAAGACATCTCGGTCAGTAGTGGTGGTGGTGGTGGGGGCACCCTTAATGTGTTTGTaGAGGTGGTCCCGCCGCCCC | + |
Preference number: 4 (lower is better) Translates to: GANILKTSRSVVVVVVGAPLMCL*RWSRRP Trigger: GGGGCGGCGGGACCACCTGCACAAACACATTAAGGG...TGCCCCCACCACCACCACCACTACTGACCGAGATGTCTTAAGTATGTTTGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | TACACACACCATGCACAGTCCACACCACTGTGGGAATCCGGTATCACATGCAAGGCTTGCACCCGAGGCTaGTGTCCACACTGGGAGCTC | + |
Preference number: 4 (lower is better) Translates to: YTHHAQSTPLWESGITCKACTRG*CPHWEL Trigger: GAGCTCCCAGTGTGGACAGCAGCCTCGGGTGCAAGC...CTTGCATGTGATACCGGATTCCCACAGTGGTGTGGACTGTGCATGGTGTGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | GACACCGTCACCAGCTCAGCAACAGAGAGAATGCCAACTGAAGGGAACATCTCTGGACCTACTGCTCCCTaGAAGGGAGCCTCCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: DTVTSSATERMPTEGNISGPTAP*KGASPA Trigger: TGCTGGGGAGGCTCCCTTGCAGGGAGCAGTAGGTCC...AGAGATGTTCCCTTCAGTTGGCATTCTCTCTGTTGCTGAGCTGGTGACGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | AGGGGCAGGGGCAGGGAAGAGATCGCTGTGTATGTTAAACCTCCTGTTATCGGTGAGTCACTGCTGCCGTaGGGCGTTCCTGGCTATGTG | + |
Preference number: 4 (lower is better) Translates to: RGRGREEIAVYVKPPVIGESLLP*GVPGYV Trigger: CACATAGCCAGGAACGCCCCACGGCAGCAGTGACTC...ACCGATAACAGGAGGTTTAACATACACAGCGATCTCTTCCCTGCCCCTGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | CACTCACACACAGAGACTACCACTTTCTCTCACTTCCCACGGCGCTGCTGCTTGGGCACTGGTCATATTTaGGGAGGCCAGAGAAGCCCC | + |
Preference number: 4 (lower is better) Translates to: HSHTETTTFSHFPRRCCLGTGHI*GGQRSP Trigger: GGGGCTTCTCTGGCCTCCCCAAATATGACCAGTGCC...CAAGCAGCAGCGCCGTGGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | GTGTGCTGGCTAACGTGTGCCTTCACCCGAGAGGGAGCAAACATACTTAAGACAGGCCTCATTCATGACTaGGCCCAGGGAGGAGCAGGC | + |
Preference number: 4 (lower is better) Translates to: VCWLTCAFTREGANILKTGLIHD*AQGGAG Trigger: GCCTGCTCCTCCCTGGGCCCAGTCATGAATGAGGCC...TGTCTTAAGTATGTTTGCTCCCTCTCGGGTGAAGGCACACGTTAGCCAGCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | AAGCCACTCACACACAGAGACTACCACTTTCTCTCACTTCCCACGGCGCTGCTGCTGTGTAGGTCCTCCTaGAGTGGAAGGGCTGACCAT | + |
Preference number: 4 (lower is better) Translates to: KPLTHRDYHFLSLPTALLLCRSS*SGRADH Trigger: ATGGTCAGCCCTTCCACTGCAGGAGGACCTACACAG...CAGCAGCGCCGTGGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | GCAGTGATTGCCCTGGGACTGGAGACTGAACTTGGGTCCTCTGCAAAAACAGTGGGAGGATGGTCACTGTaGGACCACTGGGCTCTGTCT | + |
Preference number: 4 (lower is better) Translates to: AVIALGLETELGSSAKTVGGWSL*DHWALS Trigger: AGACAGAGCCCAGTGGTCGCACAGTGACCATCCTCC...CACTGTTTTTGCAGAGGACCCAAGTTCAGTCTCCAGTCCCAGGGCAATCACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | AAGCCACTCACACACAGAGACTACCACTTTCTCTCACTTCCCACGGCGCTGCTGGGCTGCTGTCCACACTaGGAGCTCTGCAGATCTTTC | + |
Preference number: 4 (lower is better) Translates to: KPLTHRDYHFLSLPTALLGCCPH*ELCRSF Trigger: GAAAGATCTGCAGAGCTCCCAGTGTGGACAGCAGCC...CAGCAGCGCCGTGGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | CACACCACTGTGGGAATCCGGTATCACATGCAAGATGGCGGAGAAATCACGATGTGCCGTGTCCACTCCTaGCACGGGAGGCTTATCCCA | + |
Preference number: 4 (lower is better) Translates to: HTTVGIRYHMQDGGEITMCRVHS*HGRLIP Trigger: TGGGATAAGCCTCCCGTGCCAGGAGTGGACACGGCA...CATCGTGATTTCTCCGCCATCTTGCATGTGATACCGGATTCCCACAGTGGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | CAACCTTTGGGTTGTGACCTCCGGACAACTGATTCATACAGTAGCACAATTCCATGGAGGCGAGTACGGTaGCCGCCAGGAGAGGGGGTG | + |
Preference number: 4 (lower is better) Translates to: QPLGCDLRTTDSYSSTIPWRRVR*PPGEGV Trigger: CACCCCCTCTCCTGGCGGCCACCGTACTCGCCTCCA...TGGAATTGTGCTACTGTATGAATCAGTTGTCCGGAGGTCACAACCCAAAGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | CTGAGAACACAATGGACACGGAGGAACAGAAGGATCTCTGTGTTGGGAGGGAACGCCGTGGGGCGTTCCTaGCTATGTGCTGCAACTGTC | + |
Preference number: 4 (lower is better) Translates to: LRTQWTRRNRRISVLGGNAVGRS*LCAATV Trigger: GACAGTTGCAGCACATAGCCAGGAACGCCCCACGGC...GTTCCCTCCCAACACAGAGATCCTTCTGTTCCTCCGTGTCCATTGTGTTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | GCAGTGATTGCCCTGGGACTGGAGACTGAACTTGGGTCCTCTGCAAAAACAGTGAGGCAGGCGGCATTCTaGACCTGGATGGGAGTCACT | + |
Preference number: 4 (lower is better) Translates to: AVIALGLETELGSSAKTVRQAAF*TWMGVT Trigger: AGTGACTCCCATCCAGGTCCAGAATGCCGCCTGCCT...CACTGTTTTTGCAGAGGACCCAAGTTCAGTCTCCAGTCCCAGGGCAATCACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | CTGAGAACACAATGGACACGGAGGAACAGAAGGATCTCTGTGTTGGGAGGGAACGGAGTCCAGGGAGGATaGTCACTGTGCGACCACTGG | + |
Preference number: 4 (lower is better) Translates to: LRTQWTRRNRRISVLGGNGVQGG*SLCDHW Trigger: CCAGTGGTCGCACAGTGACCATCCTCCCTGGACTCC...GTTCCCTCCCAACACAGAGATCCTTCTGTTCCTCCGTGTCCATTGTGTTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | GTGTGCTGGCTAACGTGTGCCTTCACCCGAGAGGGAGCAAACATACTTAAGACACGGTGGAAGGCATCCTaGGCTAGGGCTGCTGTTCCA | + |
Preference number: 4 (lower is better) Translates to: VCWLTCAFTREGANILKTRWKAS*ARAAVP Trigger: TGGAACAGCAGCCCTAGCCCAGGATGCCTTCCACCG...TGTCTTAAGTATGTTTGCTCCCTCTCGGGTGAAGGCACACGTTAGCCAGCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | GAGTGCATCTCTTACCACCACTGTCTCACAAACTTTTACTGTGTCTTGGGGCATGGTGTCGGGGTGCTTTaGGGCAGAGGTGCTCTGCGC | + |
Preference number: 4 (lower is better) Translates to: ECISYHHCLTNFYCVLGHGVGVL*GRGALR Trigger: GCGCAGAGCACCTCTGCCTCAAAGCACCCCGACACC...ATGCCCCAAGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAGAGATGCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | CAACCTTTGGGTTGTGACCTCCGGACAACTGATTCATACAGTAGCACAATTCCAAGCAGCAGTAGCGCCTaGCGGGGTGGAGGCGAGTAC | + |
Preference number: 4 (lower is better) Translates to: QPLGCDLRTTDSYSSTIPSSSSA*RGGGEY Trigger: GTACTCGCCTCCACCCCGTCAGGCGCTACTGCTGCT...TGGAATTGTGCTACTGTATGAATCAGTTGTCCGGAGGTCACAACCCAAAGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR TCA 90 bp | GCAGTGATTGCCCTGGGACTGGAGACTGAACTTGGGTCCTCTGCAAAAACAGTGCATTGCGGGCCTGATTaGCTGTCATCTGCCCAGACA | + |
Preference number: 4 (lower is better) Translates to: AVIALGLETELGSSAKTVHCGPD*LSSAQT Trigger: TGTCTGGGCAGATGACAGTCAATCAGGCCCGCAATG...CACTGTTTTTGCAGAGGACCCAAGTTCAGTCTCCAGTCCCAGGGCAATCACTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR TCA 90 bp | AGGGGCAGGGGCAGGGAAGAGATCGCTGTGTATGTTAAACCTCCTGTTATCGGTACAGCATTGCGGGCCTaGTTGACTGTCATCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: RGRGREEIAVYVKPPVIGTALRA*LTVICP Trigger: TGGGCAGATGACAGTCAATCAGGCCCGCAATGCTGT...ACCGATAACAGGAGGTTTAACATACACAGCGATCTCTTCCCTGCCCCTGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | AATTGTAAGGTGTGGGCACAGCCACTCCCAGCAAGCCTTGCCGAACAGTCCCAGGGTTTCCAAGGCCTCTaGTTGATGCCATCCAGAAGT | + |
Preference number: 4 (lower is better) Translates to: NCKVWAQPLPASLAEQSQGFQGL*LMPSRS Trigger: ACTTCTGGATGGCATCAAGCAGAGGCCTTGGAAACC...CTGGGACTGTTCGGCAAGGCTTGCTGGGAGTGGCTGTGCCCACACCTTACAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | CACTCACACACAGAGACTACCACTTTCTCTCACTTCCCACGGCGCTGCTGCTTGCCACACTGGGAGCTCTaGAGATCTTTCGAGCCACAA | + |
Preference number: 4 (lower is better) Translates to: HSHTETTTFSHFPRRCCLPHWEL*RSFEPQ Trigger: TTGTGGCTCGAAAGATCTGCAGAGCTCCCAGTGTGG...CAAGCAGCAGCGCCGTGGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | AGTCAGGCATGGTGGTGCACAGCAAGAGCGCCAGACACTAGGCTGGCTGAGGTGCAATTAACCCAGTGGTaGTTATATGGACCTGAGACG | + |
Preference number: 4 (lower is better) Translates to: SQAWWCTARAPDTRLAEVQLTQW*LYGPET Trigger: CGTCTCAGGTCCATATAAGCACCACTGGGTTAATTG...CACCTCAGCCAGCCTAGTGTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | TTTCCTAGCAAGACTACAAGTCAGGCATGGTGGTGCACAGCAAGAGCGCCAGACCTGTGTAGGTCCTCCTaGAGTGGAAGGGCTGACCAT | + |
Preference number: 4 (lower is better) Translates to: FPSKTTSQAWWCTARAPDLCRSS*SGRADH Trigger: ATGGTCAGCCCTTCCACTGCAGGAGGACCTACACAG...GTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACTTGTAGTCTTGCTAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | ACAGAACAGAGATTTCAATGCGCTCACTGCATGCTGCTTCCTCGGGTAATGAGTGATGGGAGTCACTGCTaGCGTGGGGCGTTCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: TEQRFQCAHCMLLPRVMSDGSHC*RGAFLA Trigger: AGCCAGGAACGCCCCACGGCAGCAGTGACTCCCATC...ACTCATTACCCGAGGAAGCAGCATGCAGTGAGCGCATTGAAATCTCTGTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | GCAGTGATTGCCCTGGGACTGGAGACTGAACTTGGGTCCTCTGCAAAAACAGTGCCGCTGACTTCCCCGTaGTACCAATTCTCATCCACC | + |
Preference number: 4 (lower is better) Translates to: AVIALGLETELGSSAKTVPLTSP*YQFSST Trigger: GGTGGATGAGAATTGGTACCACGGGGAAGTCAGCGG...CACTGTTTTTGCAGAGGACCCAAGTTCAGTCTCCAGTCCCAGGGCAATCACTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | AAGCCACTCACACACAGAGACTACCACTTTCTCTCACTTCCCACGGCGCTGCTGTCCTGGTGTTCTTCTTaGTGTCGGGGTGCTTTGAGG | + |
Preference number: 4 (lower is better) Translates to: KPLTHRDYHFLSLPTALLSWCSS*CRGALR Trigger: CCTCAAAGCACCCCGACACCAAGAAGAACACCAGGA...CAGCAGCGCCGTGGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | CCAGGGCAGCATGAGGACACCGTCACCAGCTCAGCAACAGAGAGAATGCCAACTATAGAGACTTTAGCTTaGGAGGCATTCGTCACCGCC | + |
Preference number: 4 (lower is better) Translates to: PGQHEDTVTSSATERMPTIETLA*EAFVTA Trigger: GGCGGTGACGAATGCCTCCCAAGCTAAAGTCTCTAT...AGTTGGCATTCTCTCTGTTGCTGAGCTGGTGACGGTGTCCTCATGCTGCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | CACACCACTGTGGGAATCCGGTATCACATGCAAGATGGCGGAGAAATCACGATGGAGCTTGTCTTGCGGTaGAAGGCATCCTGGGCTAGG | + |
Preference number: 4 (lower is better) Translates to: HTTVGIRYHMQDGGEITMELVLR*KASWAR Trigger: CCTAGCCCAGGATGCCTTCCACCGCAAGACAAGCTC...CATCGTGATTTCTCCGCCATCTTGCATGTGATACCGGATTCCCACAGTGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | CACACCACTGTGGGAATCCGGTATCACATGCAAGATGGCGGAGAAATCACGATGGGCATTCGGGACATCTaGGTTCATTCCGGGAACCCA | + |
Preference number: 4 (lower is better) Translates to: HTTVGIRYHMQDGGEITMGIRDI*VHSGNP Trigger: TGGGTTCCCGGAATGAACTCAGATGTCCCGAATGCC...CATCGTGATTTCTCCGCCATCTTGCATGTGATACCGGATTCCCACAGTGGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | GACACCGTCACCAGCTCAGCAACAGAGAGAATGCCAACTGAAGGGAACATCTCTACTGTTCCCACACGCTaGTGCAGCACTCTCTGGAGA | + |
Preference number: 4 (lower is better) Translates to: DTVTSSATERMPTEGNISTVPTR*CSTLWR Trigger: TCTCCAGAGAGTGCTGCATCAGCGTGTGGGAACAGT...AGAGATGTTCCCTTCAGTTGGCATTCTCTCTGTTGCTGAGCTGGTGACGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | TTTCCTAGCAAGACTACAAGTCAGGCATGGTGGTGCACAGCAAGAGCGCCAGACACCACAGTGCTGCCCTaGGCCCTTAATGTGTTTGTG | + |
Preference number: 4 (lower is better) Translates to: FPSKTTSQAWWCTARAPDTTVLP*ALNVFV Trigger: CACAAACACATTAAGGGCGCAGGGCAGCACTGTGGT...GTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACTTGTAGTCTTGCTAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | GCAGTGATTGCCCTGGGACTGGAGACTGAACTTGGGTCCTCTGCAAAAACAGTGCCACACTGGGAGCTCTaGAGATCTTTCGAGCCACAA | + |
Preference number: 4 (lower is better) Translates to: AVIALGLETELGSSAKTVPHWEL*RSFEPQ Trigger: TTGTGGCTCGAAAGATCTGCAGAGCTCCCAGTGTGG...CACTGTTTTTGCAGAGGACCCAAGTTCAGTCTCCAGTCCCAGGGCAATCACTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | CTGAGAACACAATGGACACGGAGGAACAGAAGGATCTCTGTGTTGGGAGGGAACAGTCGTAAAGTGCTTTaGACTGAGGCGGGGGCTGAG | + |
Preference number: 4 (lower is better) Translates to: LRTQWTRRNRRISVLGGNSRKVL*TEAGAE Trigger: CTCAGCCCCCGCCTCAGTGCAAAGCACTTTACGACT...GTTCCCTCCCAACACAGAGATCCTTCTGTTCCTCCGTGTCCATTGTGTTCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | GACACCGTCACCAGCTCAGCAACAGAGAGAATGCCAACTGAAGGGAACATCTCTTTCTTGGTGTCGGGGTaGTTTGAGGCAGAGGTGCTC | + |
Preference number: 4 (lower is better) Translates to: DTVTSSATERMPTEGNISFLVSG*FEAEVL Trigger: GAGCACCTCTGCCTCAAAGCACCCCGACACCAAGAA...AGAGATGTTCCCTTCAGTTGGCATTCTCTCTGTTGCTGAGCTGGTGACGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | AAAACAGAACAGAGATTTCAATGCGCTCACTGCATGCTGCTTCCTCGGGTAATGCTGGATGGGAGTCACTaGTGCCGTGGGGCGTTCCTG | + |
Preference number: 4 (lower is better) Translates to: KTEQRFQCAHCMLLPRVMLDGSH*CRGAFL Trigger: CAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAG...CATTACCCGAGGAAGCAGCATGCAGTGAGCGCATTGAAATCTCTGTTCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | CACACCACTGTGGGAATCCGGTATCACATGCAAGATGGCGGAGAAATCACGATGCCGCTGACTTCCCCGTaGTACCAATTCTCATCCACC | + |
Preference number: 4 (lower is better) Translates to: HTTVGIRYHMQDGGEITMPLTSP*YQFSST Trigger: GGTGGATGAGAATTGGTACCACGGGGAAGTCAGCGG...CATCGTGATTTCTCCGCCATCTTGCATGTGATACCGGATTCCCACAGTGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | AAGCCACTCACACACAGAGACTACCACTTTCTCTCACTTCCCACGGCGCTGCTGTTGTACCAGCCGTCCTaGCAACGCTCAAACACCAAA | + |
Preference number: 4 (lower is better) Translates to: KPLTHRDYHFLSLPTALLLYQPS*QRSNTK Trigger: TTTGGTGTTTGAGCGTTGCCAGGACGGCTGGTACAA...CAGCAGCGCCGTGGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | AACTACGGTTCAAAGCCACTCACACACAGAGACTACCACTTTCTCTCACTTCCCGCGGCATTCTGGACCTaGATGGGAGTCACTGCTGCC | + |
Preference number: 4 (lower is better) Translates to: NYGSKPLTHRDYHFLSLPAAFWT*MGVTAA Trigger: GGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCGC...GGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTGGCTTTGAACCGTAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | AAAACAGAACAGAGATTTCAATGCGCTCACTGCATGCTGCTTCCTCGGGTAATGGGCCTCATTCATGACTaGGCCCAGGGAGGAGCAGGC | + |
Preference number: 4 (lower is better) Translates to: KTEQRFQCAHCMLLPRVMGLIHD*AQGGAG Trigger: GCCTGCTCCTCCCTGGGCCCAGTCATGAATGAGGCC...CATTACCCGAGGAAGCAGCATGCAGTGAGCGCATTGAAATCTCTGTTCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR TCA 90 bp | ATGAACCAAGAAAGCCATGGGAACCTACGCTGTGTTCTGTCTCAGGAGACAGGAGGACTTGTCTGGATATaGGCTGCTGACACCACAGCC | + |
Preference number: 4 (lower is better) Translates to: MNQESHGNLRCVLSQETGGLVWI*AADTTA Trigger: GGCTGTGGTGTCAGCAGCTCATATCCAGACAAGTCC...TCCTGTCTCCTGAGACAGAACACAGCGTAGGTTCCCATGGCTTTCTTGGTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | TTTCCTAGCAAGACTACAAGTCAGGCATGGTGGTGCACAGCAAGAGCGCCAGACGGTTTCCAAGGCCTCTaGTTGATGCCATCCAGAAGT | + |
Preference number: 4 (lower is better) Translates to: FPSKTTSQAWWCTARAPDGFQGL*LMPSRS Trigger: ACTTCTGGATGGCATCAAGCAGAGGCCTTGGAAACC...GTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACTTGTAGTCTTGCTAGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | TTTCCTAGCAAGACTACAAGTCAGGCATGGTGGTGCACAGCAAGAGCGCCAGACTTCAAAGTCGTAAAGTaGTTTGCACTGAGGCGGGGG | + |
Preference number: 4 (lower is better) Translates to: FPSKTTSQAWWCTARAPDFKVVK*FALRRG Trigger: CCCCCGCCTCAGTGCAAAGCACTTTACGACTTTGAA...GTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACTTGTAGTCTTGCTAGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | AATTGTAAGGTGTGGGCACAGCCACTCCCAGCAAGCCTTGCCGAACAGTCCCAGCCTATCTTGCTGGTATaGATCGATGTCCCTTTGTAC | + |
Preference number: 4 (lower is better) Translates to: NCKVWAQPLPASLAEQSQPILLV*IDVPLY Trigger: GTACAAAGGGACATCGATGCATACCAGCAAGATAGG...CTGGGACTGTTCGGCAAGGCTTGCTGGGAGTGGCTGTGCCCACACCTTACAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | CACTCACACACAGAGACTACCACTTTCTCTCACTTCCCACGGCGCTGCTGCTTGTTCCTGGCTATGTGCTaGAACTGTCCTCACAGCATT | + |
Preference number: 4 (lower is better) Translates to: HSHTETTTFSHFPRRCCLFLAMC*NCPHSI Trigger: AATGCTGTGAGGACAGTTGCAGCACATAGCCAGGAA...CAAGCAGCAGCGCCGTGGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | CTTACCACCACTGTCTCACAAACTTTTACTGTGTCTTGGGGCATGCGGATCACTCGGTTCTGGGACCCCTaGGAAGACTTGTTGGCCATG | + |
Preference number: 4 (lower is better) Translates to: LTTTVSQTFTVSWGMRITRFWDP*EDLLAM Trigger: CATGGCCAACAAGTCTTCCCAGGGGTCCCAGAACCG...AGTGATCCGCATGCCCCAAGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | ACAGAACAGAGATTTCAATGCGCTCACTGCATGCTGCTTCCTCGGGTAATGAGTCATTCTGGACCTGGATaGGAGTCACTGCTGCCGTGG | + |
Preference number: 4 (lower is better) Translates to: TEQRFQCAHCMLLPRVMSHSGPG*ESLLPW Trigger: CCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATG...ACTCATTACCCGAGGAAGCAGCATGCAGTGAGCGCATTGAAATCTCTGTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | ACAGAACAGAGATTTCAATGCGCTCACTGCATGCTGCTTCCTCGGGTAATGAGTGAGCTTGTCTTGCGGTaGAAGGCATCCTGGGCTAGG | + |
Preference number: 4 (lower is better) Translates to: TEQRFQCAHCMLLPRVMSELVLR*KASWAR Trigger: CCTAGCCCAGGATGCCTTCCACCGCAAGACAAGCTC...ACTCATTACCCGAGGAAGCAGCATGCAGTGAGCGCATTGAAATCTCTGTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR TCA 90 bp | GCTGTCTGTTTGGAAAACTGGCATTTTTGTCTAAACGGAGCCAAATATAACGGCTGGGAGGCCAGAGAATaGTGGGGCAGGCCCACGGAT | + |
Preference number: 4 (lower is better) Translates to: AVCLENWHFCLNGAKYNGWEARE*WGRPTD Trigger: ATCCGTGGGCCTGCCCCATCATTCTCTGGCCTCCCA...GCCGTTATATTTGGCTCCGTTTAGACAAAAATGCCAGTTTTCCAAACAGACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | AGGGGCAGGGGCAGGGAAGAGATCGCTGTGTATGTTAAACCTCCTGTTATCGGTCAATATCTCCTTCCTTaGGTTCAAGTTCGGCCTCAC | + |
Preference number: 4 (lower is better) Translates to: RGRGREEIAVYVKPPVIGQYLLP*VQVRPH Trigger: GTGAGGCCGAACTTGAACTCAAGGAAGGAGATATTG...ACCGATAACAGGAGGTTTAACATACACAGCGATCTCTTCCCTGCCCCTGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | CACTCACACACAGAGACTACCACTTTCTCTCACTTCCCACGGCGCTGCTGCTTGCAATTAACCCAGTGGTaGTTATATGGACCTGAGACG | + |
Preference number: 4 (lower is better) Translates to: HSHTETTTFSHFPRRCCLQLTQW*LYGPET Trigger: CGTCTCAGGTCCATATAAGCACCACTGGGTTAATTG...CAAGCAGCAGCGCCGTGGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | GAGTGCATCTCTTACCACCACTGTCTCACAAACTTTTACTGTGTCTTGGGGCATTGGAGCAATGGGCACTaGGGAGTCCAGGGAGCTTGT | + |
Preference number: 4 (lower is better) Translates to: ECISYHHCLTNFYCVLGHWSNGH*GVQGAC Trigger: ACAAGCTCCCTGGACTCCGCAGTGCCCATTGCTCCA...ATGCCCCAAGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAGAGATGCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | CACACCACTGTGGGAATCCGGTATCACATGCAAGATGGCGGAGAAATCACGATGATAGAGACTTTAGCTTaGGAGGCATTCGTCACCGCC | + |
Preference number: 4 (lower is better) Translates to: HTTVGIRYHMQDGGEITMIETLA*EAFVTA Trigger: GGCGGTGACGAATGCCTCCCAAGCTAAAGTCTCTAT...CATCGTGATTTCTCCGCCATCTTGCATGTGATACCGGATTCCCACAGTGGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | CAATTCAAGTCTAGAGGGAACAGCGTGTACAGAGACACTAAAACAGATGAGGCTGAGTCACTGCTGCCGTaGGGCGTTCCTGGCTATGTG | + |
Preference number: 4 (lower is better) Translates to: QFKSRGNSVYRDTKTDEAESLLP*GVPGYV Trigger: CACATAGCCAGGAACGCCCCACGGCAGCAGTGACTC...AGCCTCATCTGTTTTAGTGTCTCTGTACACGCTGTTCCCTCTAGACTTGAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | CAATTCAAGTCTAGAGGGAACAGCGTGTACAGAGACACTAAAACAGATGAGGCTGCGGCATTCTGGACCTaGATGGGAGTCACTGCTGCC | + |
Preference number: 4 (lower is better) Translates to: QFKSRGNSVYRDTKTDEAAAFWT*MGVTAA Trigger: GGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCGC...AGCCTCATCTGTTTTAGTGTCTCTGTACACGCTGTTCCCTCTAGACTTGAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | CAACCTTTGGGTTGTGACCTCCGGACAACTGATTCATACAGTAGCACAATTCCAGGCACTGGTCATATTTaGGGAGGCCAGAGAAGCCCC | + |
Preference number: 4 (lower is better) Translates to: QPLGCDLRTTDSYSSTIPGTGHI*GGQRSP Trigger: GGGGCTTCTCTGGCCTCCCCAAATATGACCAGTGCC...TGGAATTGTGCTACTGTATGAATCAGTTGTCCGGAGGTCACAACCCAAAGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | CAACCTTTGGGTTGTGACCTCCGGACAACTGATTCATACAGTAGCACAATTCCACTCGGGGCTTGCGTTTaGTGGAGGCACCAGAAAGCA | + |
Preference number: 4 (lower is better) Translates to: QPLGCDLRTTDSYSSTIPLGACV*WRHQKA Trigger: TGCTTTCTGGTGCCTCCACCAAACGCAAGCCCCGAG...TGGAATTGTGCTACTGTATGAATCAGTTGTCCGGAGGTCACAACCCAAAGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR CAA 72 bp | GGCTCTGGAGTCAGGTGCCCATCTTCTGCTCGGTTCTaGAAGATCTGGAAGTCCACAGATGTGCTCTTTCTA | + |
Preference number: 4 (lower is better) Translates to: GSGVRCPSSARF*KIWKSTDVLFL Trigger: TAGAAAGAGCACATCTGTGGACTTCCAGATCTTCAAGAACCGAGCAGAAGATGGGCACCTGACTCCAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CAA 72 bp | GTCGACTTCTCATCCCCACCACGGTGTGACAAGCCCTaGTTACAACATCCATCTACTGTCTCCAAAAAGCCC | + |
Preference number: 4 (lower is better) Translates to: VDFSSPPRCDKP*LQHPSTVSKKP Trigger: GGGCTTTTTGGAGACAGTAGATGGATGTTGTAACAAGGGCTTGTCACACCGTGGTGGGGATGAGAAGTCGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | GCTGTCTGTTTGGAAAACTGGCATTTTTGTCTAAACGGAGCCAAATATAACGGCCTGGATATGAGCTGCTaGCACCACAGCCGTGGGGAC | + |
Preference number: 4 (lower is better) Translates to: AVCLENWHFCLNGAKYNGLDMSC*HHSRGD Trigger: GTCCCCACGGCTGTGGTGTCAGCAGCTCATATCCAG...GCCGTTATATTTGGCTCCGTTTAGACAAAAATGCCAGTTTTCCAAACAGACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | GAGTGCATCTCTTACCACCACTGTCTCACAAACTTTTACTGTGTCTTGGGGCATCATTGCGGGCCTGATTaGCTGTCATCTGCCCAGACA | + |
Preference number: 4 (lower is better) Translates to: ECISYHHCLTNFYCVLGHHCGPD*LSSAQT Trigger: TGTCTGGGCAGATGACAGTCAATCAGGCCCGCAATG...ATGCCCCAAGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAGAGATGCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | GACACCGTCACCAGCTCAGCAACAGAGAGAATGCCAACTGAAGGGAACATCTCTAGTTTTCATCCACTCTaGGGATCACGGTCAGTACGT | + |
Preference number: 4 (lower is better) Translates to: DTVTSSATERMPTEGNISSFHPL*GSRSVR Trigger: ACGTACTGACCGTGATCCGCAGAGTGGATGAAAACT...AGAGATGTTCCCTTCAGTTGGCATTCTCTCTGTTGCTGAGCTGGTGACGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | GCTGTCTGTTTGGAAAACTGGCATTTTTGTCTAAACGGAGCCAAATATAACGGCAGGTATTCCCCTCACTaGGGGGCTCCAGGCTTGCAC | + |
Preference number: 4 (lower is better) Translates to: AVCLENWHFCLNGAKYNGRYSPH*GAPGLH Trigger: GTGCAAGCCTGGAGCCCCCCAGTGAGGGGAATACCT...GCCGTTATATTTGGCTCCGTTTAGACAAAAATGCCAGTTTTCCAAACAGACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | ATCTTCTGCTCGGTTCTTGAAGATCTGGAAGTCCACAGATGTGCTCTTTCTATGAGGCAGGCGGCATTCTaGACCTGGATGGGAGTCACT | + |
Preference number: 4 (lower is better) Translates to: IFCSVLEDLEVHRCALSMRQAAF*TWMGVT Trigger: AGTGACTCCCATCCAGGTCCAGAATGCCGCCTGCCT...CATAGAAAGAGCACATCTGTGGACTTCCAGATCTTCAAGAACCGAGCAGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | TCTCCAAAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCAGCAGGCCTGGCGAGGTaGTGGAGCAATGGGCACTGC | + |
Preference number: 4 (lower is better) Translates to: SPKSPIQNPHIISPSDLPAGLAR*WSNGHC Trigger: GCAGTGCCCATTGCTCCACCACCTCGCCAGGCCTGC...TGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTTTGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | AAAACAGAACAGAGATTTCAATGCGCTCACTGCATGCTGCTTCCTCGGGTAATGACACTGGGACGAGTCTaGGGCCGTAAATGTGCAATC | + |
Preference number: 4 (lower is better) Translates to: KTEQRFQCAHCMLLPRVMTLGRV*GRKCAI Trigger: GATTGCACATTTACGGCCTCAGACTCGTCCCAGTGT...CATTACCCGAGGAAGCAGCATGCAGTGAGCGCATTGAAATCTCTGTTCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR TCA 90 bp | AGAGAATGCCAACTGAAGGGAACATCTCTCCAAACTGGAAGTTTGTTTATCTTCCACATCCAGGGTAGGTaGTGCTGGAGGGGAGACTCG | + |
Preference number: 4 (lower is better) Translates to: RECQLKGTSLQTGSLFIFHIQGR*CWRGDS Trigger: CGAGTCTCCCCTCCAGCATCACCTACCCTGGATGTG...GAAGATAAACAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | GACACCGTCACCAGCTCAGCAACAGAGAGAATGCCAACTGAAGGGAACATCTCTCGTTTGCAAAAGGTATaGTGGCAGGGTAAGACCTTT | + |
Preference number: 4 (lower is better) Translates to: DTVTSSATERMPTEGNISRLQKV*WQGKTF Trigger: AAAGGTCTTACCCTGCCAGCATACCTTTTGCAAACG...AGAGATGTTCCCTTCAGTTGGCATTCTCTCTGTTGCTGAGCTGGTGACGGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | CAAAGCCAAAATCGCTCTAAGAATGCTGATCATTCTGAGTCTATGAACCAAGAAGCTTGCACCCGAGGCTaGTGTCCACACTGGGAGCTC | + |
Preference number: 4 (lower is better) Translates to: QSQNRSKNADHSESMNQEACTRG*CPHWEL Trigger: GAGCTCCCAGTGTGGACAGCAGCCTCGGGTGCAAGC...TTCTTGGTTCATAGACTCAGAATGATCAGCATTCTTAGAGCGATTTTGGCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | ATCTTCTGCTCGGTTCTTGAAGATCTGGAAGTCCACAGATGTGCTCTTTCTATGAGTCGTAAAGTGCTTTaGACTGAGGCGGGGGCTGAG | + |
Preference number: 4 (lower is better) Translates to: IFCSVLEDLEVHRCALSMSRKVL*TEAGAE Trigger: CTCAGCCCCCGCCTCAGTGCAAAGCACTTTACGACT...CATAGAAAGAGCACATCTGTGGACTTCCAGATCTTCAAGAACCGAGCAGAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | ATTTCCAGTCAATGGTTGTGCTTTAGTTTGCGTCTTTCTTTACCCACTTCGTTTTTCGCTGATGCGGGCTaGGGCTGTGGGGTTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: ISSQWLCFSLRLSLPTSFFADAG*GCGVAG Trigger: TCCAGCAACCCCACAGCCGCAGCCCGCATCAGCGAA...AAACGAAGTGGGTAAAGAAAGACGCAAACTAAAGCACAACCATTGACTGGAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | CAAAGCCAAAATCGCTCTAAGAATGCTGATCATTCTGAGTCTATGAACCAAGAAGGGAGACTCGGGGCTTaGGTTTGGTGGAGGCACCAG | + |
Preference number: 4 (lower is better) Translates to: QSQNRSKNADHSESMNQEGRLGA*VWWRHQ Trigger: CTGGTGCCTCCACCAAACGCAAGCCCCGAGTCTCCC...TTCTTGGTTCATAGACTCAGAATGATCAGCATTCTTAGAGCGATTTTGGCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | TTTAACACGAGTGCATCTCTTACCACCACTGTCTCACAAACTTTTACTGTGTCTCCAGGGAGCTTGTCTTaGGGTGGAAGGCATCCTGGG | + |
Preference number: 4 (lower is better) Translates to: FNTSASLTTTVSQTFTVSPGSLS*GGRHPG Trigger: CCCAGGATGCCTTCCACCGCAAGACAAGCTCCCTGG...AGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAGAGATGCACTCGTGTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | AGTCCATTAGACATTACAAGGCACACTTTACACATCAGAACCCAGAGAGACGGATCTGCACGAAGTTGGTaGGGAAAAAGCCGTGGACCC | + |
Preference number: 4 (lower is better) Translates to: SPLDITRHTLHIRTQRDGSARSW*GKSRGP Trigger: GGGTCCACGGCTTTTTCCCCACCAACTTCGTGCAGA...TCCGTCTCTCTGGGTTCTGATGTGTAAAGTGTGCCTTGTAATGTCTAATGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | AGAGAATGCCAACTGAAGGGAACATCTCTCCAAACTGGAAGTTTGTTTATCTTCTGCCGTGTCCACTCCTaGCACGGGAGGCTTATCCCA | + |
Preference number: 4 (lower is better) Translates to: RECQLKGTSLQTGSLFIFCRVHS*HGRLIP Trigger: TGGGATAAGCCTCCCGTGCCAGGAGTGGACACGGCA...GAAGATAAACAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | TCTCCAAACTGGAAGTTTGTTTATCTTCTACAATTCAAGTCTAGAGGGAACAGCAGCAGGACCCGCCATTaGAGGCAGAGGTTGGGAGGC | + |
Preference number: 4 (lower is better) Translates to: SPNWKFVYLLQFKSRGNSSRTRH*RQRLGG Trigger: GCCTCCCAACCTCTGCCTCCAATGGCGGGTCCTGCT...GCTGTTCCCTCTAGACTTGAATTGTAGAAGATAAACAAACTTCCAGTTTGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | TTTAACACGAGTGCATCTCTTACCACCACTGTCTCACAAACTTTTACTGTGTCTGGAGTCCAGGGAGGATaGTCACTGTGCGACCACTGG | + |
Preference number: 4 (lower is better) Translates to: FNTSASLTTTVSQTFTVSGVQGG*SLCDHW Trigger: CCAGTGGTCGCACAGTGACCATCCTCCCTGGACTCC...AGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAGAGATGCACTCGTGTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | AGTCCATTAGACATTACAAGGCACACTTTACACATCAGAACCCAGAGAGACGGAACCACAGTGCTGCCCTaGGCCCTTAATGTGTTTGTG | + |
Preference number: 4 (lower is better) Translates to: SPLDITRHTLHIRTQRDGTTVLP*ALNVFV Trigger: CACAAACACATTAAGGGCGCAGGGCAGCACTGTGGT...TCCGTCTCTCTGGGTTCTGATGTGTAAAGTGTGCCTTGTAATGTCTAATGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | GGGAACATTTTTAGGGTAACATGTCATTTCAAAGCTGGCTTAATATCAGTCAGATTCGCTGATGCGGGCTaGGGCTGTGGGGTTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: GNIFRVTCHFKAGLISVRFADAG*GCGVAG Trigger: TCCAGCAACCCCACAGCCGCAGCCCGCATCAGCGAA...TCTGACTGATATTAAGCCAGCTTTGAAATGACATGTTACCCTAAAAATGTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | AAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCAACAGATGATGGGAGTCACTGCTaGCGTGGGGCGTTCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: KSPIQNPHIISPSDLPTDDGSHC*RGAFLA Trigger: AGCCAGGAACGCCCCACGGCAGCAGTGACTCCCATC...ATCTGTTGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | AAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCAACAGATCTGGATGGGAGTCACTaGTGCCGTGGGGCGTTCCTG | + |
Preference number: 4 (lower is better) Translates to: KSPIQNPHIISPSDLPTDLDGSH*CRGAFL Trigger: CAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAG...ATCTGTTGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | AAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCAACAGATGGACCTACTGCTCCCTaGAAGGGAGCCTCCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: KSPIQNPHIISPSDLPTDGPTAP*KGASPA Trigger: TGCTGGGGAGGCTCCCTTGCAGGGAGCAGTAGGTCC...ATCTGTTGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | AGAGAATGCCAACTGAAGGGAACATCTCTCCAAACTGGAAGTTTGTTTATCTTCCGGTTCTGGGACCCCTaGGAAGACTTGTTGGCCATG | + |
Preference number: 4 (lower is better) Translates to: RECQLKGTSLQTGSLFIFRFWDP*EDLLAM Trigger: CATGGCCAACAAGTCTTCCCAGGGGTCCCAGAACCG...GAAGATAAACAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | CAGCAACAGAGAGAATGCCAACTGAAGGGAACATCTCTCCAAACTGGAAGTTTGTTGTACCAGCCGTCCTaGCAACGCTCAAACACCAAA | + |
Preference number: 4 (lower is better) Translates to: QQQRECQLKGTSLQTGSLLYQPS*QRSNTK Trigger: TTTGGTGTTTGAGCGTTGCCAGGACGGCTGGTACAA...CAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCTCTGTTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | TTTAACACGAGTGCATCTCTTACCACCACTGTCTCACAAACTTTTACTGTGTCTCTCGGGGCTTGCGTTTaGTGGAGGCACCAGAAAGCA | + |
Preference number: 4 (lower is better) Translates to: FNTSASLTTTVSQTFTVSLGACV*WRHQKA Trigger: TGCTTTCTGGTGCCTCCACCAAACGCAAGCCCCGAG...AGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAGAGATGCACTCGTGTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | AAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCAACAGATGAGGTGGTGGAGCAATaGGCACTGCGGAGTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: KSPIQNPHIISPSDLPTDEVVEQ*ALRSPG Trigger: CCCTGGACTCCGCAGTGCCCATTGCTCCACCACCTC...ATCTGTTGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | GCTGTCTGTTTGGAAAACTGGCATTTTTGTCTAAACGGAGCCAAATATAACGGCACACTGGGACGAGTCTaGGGCCGTAAATGTGCAATC | + |
Preference number: 4 (lower is better) Translates to: AVCLENWHFCLNGAKYNGTLGRV*GRKCAI Trigger: GATTGCACATTTACGGCCTCAGACTCGTCCCAGTGT...GCCGTTATATTTGGCTCCGTTTAGACAAAAATGCCAGTTTTCCAAACAGACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | TTAACCAGCGTTATACCAGGAAGCTATTACCACGGATACTTCAATCACATAGCTACTGTTCCCACACGCTaGTGCAGCACTCTCTGGAGA | + |
Preference number: 4 (lower is better) Translates to: LTSVIPGSYYHGYFNHIATVPTR*CSTLWR Trigger: TCTCCAGAGAGTGCTGCATCAGCGTGTGGGAACAGT...AGCTATGTGATTGAAGTATCCGTGGTAATAGCTTCCTGGTATAACGCTGGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | GGAGCAAACATACTTAAGACATCTCGGTCAGTAGTGGTGGTGGTGGTGGGGGCATCCTCTCGTTTCTTATaGACAAACACAATATCTCCT | + |
Preference number: 4 (lower is better) Translates to: GANILKTSRSVVVVVVGASSRFL*TNTISP Trigger: AGGAGATATTGTGTTTGTTCATAAGAAACGAGAGGA...TGCCCCCACCACCACCACCACTACTGACCGAGATGTCTTAAGTATGTTTGCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | GAGTGCATCTCTTACCACCACTGTCTCACAAACTTTTACTGTGTCTTGGGGCATAGTTTTCATCCACTCTaGGGATCACGGTCAGTACGT | + |
Preference number: 4 (lower is better) Translates to: ECISYHHCLTNFYCVLGHSFHPL*GSRSVR Trigger: ACGTACTGACCGTGATCCGCAGAGTGGATGAAAACT...ATGCCCCAAGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAGAGATGCACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | TACACACACCATGCACAGTCCACACCACTGTGGGAATCCGGTATCACATGCAAGTATTCCTATTTTATCTaGCAGCATTCCTTCAGCCCA | + |
Preference number: 4 (lower is better) Translates to: YTHHAQSTPLWESGITCKYSYFI*QHSFSP Trigger: TGGGCTGAAGGAATGCTGGCAGATAAAATAGGAATA...CTTGCATGTGATACCGGATTCCCACAGTGGTGTGGACTGTGCATGGTGTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | CAACCTTTGGGTTGTGACCTCCGGACAACTGATTCATACAGTAGCACAATTCCATTCCTGGCTATGTGCTaGAACTGTCCTCACAGCATT | + |
Preference number: 4 (lower is better) Translates to: QPLGCDLRTTDSYSSTIPFLAMC*NCPHSI Trigger: AATGCTGTGAGGACAGTTGCAGCACATAGCCAGGAA...TGGAATTGTGCTACTGTATGAATCAGTTGTCCGGAGGTCACAACCCAAAGGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | TCTCCAAACTGGAAGTTTGTTTATCTTCTACAATTCAAGTCTAGAGGGAACAGCTGGAGCAATGGGCACTaGGGAGTCCAGGGAGCTTGT | + |
Preference number: 4 (lower is better) Translates to: SPNWKFVYLLQFKSRGNSWSNGH*GVQGAC Trigger: ACAAGCTCCCTGGACTCCGCAGTGCCCATTGCTCCA...GCTGTTCCCTCTAGACTTGAATTGTAGAAGATAAACAAACTTCCAGTTTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | TCTCCAAAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCACATTCTGGACCTGGATaGGAGTCACTGCTGCCGTGG | + |
Preference number: 4 (lower is better) Translates to: SPKSPIQNPHIISPSDLPHSGPG*ESLLPW Trigger: CCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATG...TGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTTTGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | GCTGTCTGTTTGGAAAACTGGCATTTTTGTCTAAACGGAGCCAAATATAACGGCTGCCATCCAGAAGTCTaGCCAGTAGGATGTTACTGG | + |
Preference number: 4 (lower is better) Translates to: AVCLENWHFCLNGAKYNGCHPEV*PVGCYW Trigger: CCAGTAACATCCTACTGGTCAGACTTCTGGATGGCA...GCCGTTATATTTGGCTCCGTTTAGACAAAAATGCCAGTTTTCCAAACAGACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | ATTTTTAGGGTAACATGTCATTTCAAAGCTGGCTTAATATCAGTCAGAGCTACACTGGATATGAGCTGCTaGCACCACAGCCGTGGGGAC | + |
Preference number: 4 (lower is better) Translates to: IFRVTCHFKAGLISVRATLDMSC*HHSRGD Trigger: GTCCCCACGGCTGTGGTGTCAGCAGCTCATATCCAG...TGTAGCTCTGACTGATATTAAGCCAGCTTTGAAATGACATGTTACCCTAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | ATTTCCAGTCAATGGTTGTGCTTTAGTTTGCGTCTTTCTTTACCCACTTCGTTTTTCTTGGTGTCGGGGTaGTTTGAGGCAGAGGTGCTC | + |
Preference number: 4 (lower is better) Translates to: ISSQWLCFSLRLSLPTSFFLVSG*FEAEVL Trigger: GAGCACCTCTGCCTCAAAGCACCCCGACACCAAGAA...AAACGAAGTGGGTAAAGAAAGACGCAAACTAAAGCACAACCATTGACTGGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | CAGCAACAGAGAGAATGCCAACTGAAGGGAACATCTCTCCAAACTGGAAGTTTGCCTATCTTGCTGGTATaGATCGATGTCCCTTTGTAC | + |
Preference number: 4 (lower is better) Translates to: QQQRECQLKGTSLQTGSLPILLV*IDVPLY Trigger: GTACAAAGGGACATCGATGCATACCAGCAAGATAGG...CAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCTCTGTTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | GTGTGCTGGCTAACGTGTGCCTTCACCCGAGAGGGAGCAAACATACTTAAGACAAGTTATATAATGCTTTaGCACACGGTAACTGAGGTA | + |
Preference number: 4 (lower is better) Translates to: VCWLTCAFTREGANILKTSYIML*HTVTEV Trigger: TACCTCAGTTACCGTGTGCCAAAGCATTATATAACT...TGTCTTAAGTATGTTTGCTCCCTCTCGGGTGAAGGCACACGTTAGCCAGCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | ATTTTTAGGGTAACATGTCATTTCAAAGCTGGCTTAATATCAGTCAGAGCTACACGGTGGAAGGCATCCTaGGCTAGGGCTGCTGTTCCA | + |
Preference number: 4 (lower is better) Translates to: IFRVTCHFKAGLISVRATRWKAS*ARAAVP Trigger: TGGAACAGCAGCCCTAGCCCAGGATGCCTTCCACCG...TGTAGCTCTGACTGATATTAAGCCAGCTTTGAAATGACATGTTACCCTAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | TTTAACACGAGTGCATCTCTTACCACCACTGTCTCACAAACTTTTACTGTGTCTTTCCACAAAGCTCCCTaGGAAAAGGCCAGTCTTCCC | + |
Preference number: 4 (lower is better) Translates to: FNTSASLTTTVSQTFTVSFHKAP*EKASLP Trigger: GGGAAGACTGGCCTTTTCCCAGGGAGCTTTGTGGAA...AGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAGAGATGCACTCGTGTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | GGGAACATTTTTAGGGTAACATGTCATTTCAAAGCTGGCTTAATATCAGTCAGAGGCATTCGGGACATCTaGGTTCATTCCGGGAACCCA | + |
Preference number: 4 (lower is better) Translates to: GNIFRVTCHFKAGLISVRGIRDI*VHSGNP Trigger: TGGGTTCCCGGAATGAACTCAGATGTCCCGAATGCC...TCTGACTGATATTAAGCCAGCTTTGAAATGACATGTTACCCTAAAAATGTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR TCA 90 bp | AGAGAATGCCAACTGAAGGGAACATCTCTCCAAACTGGAAGTTTGTTTATCTTCTGCCATCCAGAAGTCTaGCCAGTAGGATGTTACTGG | + |
Preference number: 4 (lower is better) Translates to: RECQLKGTSLQTGSLFIFCHPEV*PVGCYW Trigger: CCAGTAACATCCTACTGGTCAGACTTCTGGATGGCA...GAAGATAAACAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR TCA 90 bp | AAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCAACAGATCATCTGAAGGGAACGTaGACGCAGGGCCAGTTGTCA | + |
Preference number: 4 (lower is better) Translates to: KSPIQNPHIISPSDLPTDHLKGT*TQGQLS Trigger: TGACAACTGGCCCTGCGTTCACGTTCCCTTCAGATG...ATCTGTTGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR TCA 90 bp | GGGAACATTTTTAGGGTAACATGTCATTTCAAAGCTGGCTTAATATCAGTCAGACATCTGAAGGGAACGTaGACGCAGGGCCAGTTGTCA | + |
Preference number: 4 (lower is better) Translates to: GNIFRVTCHFKAGLISVRHLKGT*TQGQLS Trigger: TGACAACTGGCCCTGCGTTCACGTTCCCTTCAGATG...TCTGACTGATATTAAGCCAGCTTTGAAATGACATGTTACCCTAAAAATGTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | ACAGAACAGAGATTTCAATGCGCTCACTGCATGCTGCTTCCTCGGGTAATGAGTTATTCCTATTTTATCTaGCAGCATTCCTTCAGCCCA | + |
Preference number: 4 (lower is better) Translates to: TEQRFQCAHCMLLPRVMSYSYFI*QHSFSP Trigger: TGGGCTGAAGGAATGCTGGCAGATAAAATAGGAATA...ACTCATTACCCGAGGAAGCAGCATGCAGTGAGCGCATTGAAATCTCTGTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | GGGAACATTTTTAGGGTAACATGTCATTTCAAAGCTGGCTTAATATCAGTCAGAGGCTGCTGTCCACACTaGGAGCTCTGCAGATCTTTC | + |
Preference number: 4 (lower is better) Translates to: GNIFRVTCHFKAGLISVRGCCPH*ELCRSF Trigger: GAAAGATCTGCAGAGCTCCCAGTGTGGACAGCAGCC...TCTGACTGATATTAAGCCAGCTTTGAAATGACATGTTACCCTAAAAATGTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | TCTCCAAACTGGAAGTTTGTTTATCTTCTACAATTCAAGTCTAGAGGGAACAGCTCCTGGTGTTCTTCTTaGTGTCGGGGTGCTTTGAGG | + |
Preference number: 4 (lower is better) Translates to: SPNWKFVYLLQFKSRGNSSWCSS*CRGALR Trigger: CCTCAAAGCACCCCGACACCAAGAAGAACACCAGGA...GCTGTTCCCTCTAGACTTGAATTGTAGAAGATAAACAAACTTCCAGTTTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | CAACCTTTGGGTTGTGACCTCCGGACAACTGATTCATACAGTAGCACAATTCCATCACAATTAACCCAGTaGTGCTTATATGGACCTGAG | + |
Preference number: 4 (lower is better) Translates to: QPLGCDLRTTDSYSSTIPSQLTQ*CLYGPE Trigger: CTCAGGTCCATATAAGCACCACTGGGTTAATTGTGA...TGGAATTGTGCTACTGTATGAATCAGTTGTCCGGAGGTCACAACCCAAAGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR CAA 72 bp | GGAAGTCCACAGATGTGCTCTTTCTATGAAACTGCTTaGTGCTCTTTAGTCACACGTGGTGTGATGATAAGC | + |
Preference number: 4 (lower is better) Translates to: GSPQMCSFYETA*CSLVTRGVMIS Trigger: GCTTATCATCACACCACGTGTGACTAAAGAGCACAAAGCAGTTTCATAGAAAGAGCACATCTGTGGACTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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3UTR CAA 72 bp | ACACAATGGACACGGAGGAACAGAAGGATCTCTGTGTaGGGAGGGAACATTTTTAGGGTAACATGTCATTTC | + |
Preference number: 4 (lower is better) Translates to: TQWTRRNRRISV*GGNIFRVTCHF Trigger: GAAATGACATGTTACCCTAAAAATGTTCCCTCCCAACACAGAGATCCTTCTGTTCCTCCGTGTCCATTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | TTTAACACGAGTGCATCTCTTACCACCACTGTCTCACAAACTTTTACTGTGTCTCGTTTGCAAAAGGTATaGTGGCAGGGTAAGACCTTT | + |
Preference number: 4 (lower is better) Translates to: FNTSASLTTTVSQTFTVSRLQKV*WQGKTF Trigger: AAAGGTCTTACCCTGCCAGCATACCTTTTGCAAACG...AGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAGAGATGCACTCGTGTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | AAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCAACAGATTTCAAAGTCGTAAAGTaGTTTGCACTGAGGCGGGGG | + |
Preference number: 4 (lower is better) Translates to: KSPIQNPHIISPSDLPTDFKVVK*FALRRG Trigger: CCCCCGCCTCAGTGCAAAGCACTTTACGACTTTGAA...ATCTGTTGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | GCTGTCTGTTTGGAAAACTGGCATTTTTGTCTAAACGGAGCCAAATATAACGGCTCACAATTAACCCAGTaGTGCTTATATGGACCTGAG | + |
Preference number: 4 (lower is better) Translates to: AVCLENWHFCLNGAKYNGSQLTQ*CLYGPE Trigger: CTCAGGTCCATATAAGCACCACTGGGTTAATTGTGA...GCCGTTATATTTGGCTCCGTTTAGACAAAAATGCCAGTTTTCCAAACAGACAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | TTAACCAGCGTTATACCAGGAAGCTATTACCACGGATACTTCAATCACATAGCTAAACGCCTATCTTGCTaGTATGCATCGATGTCCCTT | + |
Preference number: 4 (lower is better) Translates to: LTSVIPGSYYHGYFNHIAKRLSC*YASMSL Trigger: AAGGGACATCGATGCATACCAGCAAGATAGGCGTTT...AGCTATGTGATTGAAGTATCCGTGGTAATAGCTTCCTGGTATAACGCTGGTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CCA 90 bp | AGAGAATGCCAACTGAAGGGAACATCTCTCCAAACTGGAAGTTTGTTTATCTTCAAACGCCTATCTTGCTaGTATGCATCGATGTCCCTT | + |
Preference number: 4 (lower is better) Translates to: RECQLKGTSLQTGSLFIFKRLSC*YASMSL Trigger: AAGGGACATCGATGCATACCAGCAAGATAGGCGTTT...GAAGATAAACAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR GCA 90 bp | TTTAACACGAGTGCATCTCTTACCACCACTGTCTCACAAACTTTTACTGTGTCTAAAGGTTTGATGATCTaGACGAAGTTGGTGGGGAAA | + |
Preference number: 4 (lower is better) Translates to: FNTSASLTTTVSQTFTVSKGLMI*TKLVGK Trigger: TTTCCCCACCAACTTCGTGCAGATCATCAAACCTTT...AGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAGAGATGCACTCGTGTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR GCA 90 bp | AGAGAATGCCAACTGAAGGGAACATCTCTCCAAACTGGAAGTTTGTTTATCTTCAAAGGTTTGATGATCTaGACGAAGTTGGTGGGGAAA | + |
Preference number: 4 (lower is better) Translates to: RECQLKGTSLQTGSLFIFKGLMI*TKLVGK Trigger: TTTCCCCACCAACTTCGTGCAGATCATCAAACCTTT...GAAGATAAACAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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3UTR CAA 72 bp | TGCCAACTGAAGGGAACATCTCTCCAAACTGGAAGTTaGTTTATCTTCTACAATTCAAGTCTAGAGGGAACA | + |
Preference number: 4 (lower is better) Translates to: CQLKGTSLQTGS*FIFYNSSLEGT Trigger: TGTTCCCTCTAGACTTGAATTGTAGAAGATAAACAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CCA 90 bp | AGAGAATGCCAACTGAAGGGAACATCTCTCCAAACTGGAAGTTTGTTTATCTTCAGTTATATAATGCTTTaGCACACGGTAACTGAGGTA | + |
Preference number: 4 (lower is better) Translates to: RECQLKGTSLQTGSLFIFSYIML*HTVTEV Trigger: TACCTCAGTTACCGTGTGCCAAAGCATTATATAACT...GAAGATAAACAAACTTCCAGTTTGGAGAGATGTTCCCTTCAGTTGGCATTCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS TCA 90 bp | AGCAGCGGCGGCGGCAGCAGCAGCAGCAACAGCAGCAGTAGCGCCTaGCGGGGTGGAGGCGAGTACGGTGGCCGCCAGGAGAGGGGGTGG | + |
Preference number: 5 (lower is better) Translates to: SSGGGSSSSNSSSSA*RGGGEYGGRQERGW Trigger: CCACCCCCTCTCCTGGCGGCCACCGTACTCGCCTCCACCCCGTCAGGCGCTACTGCTGCTGTTGCTGCTGCTGCTGCCGCCGCCGCTGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS TCA 90 bp | GCAGCAGGACCCGCCATTGGAGGCAGAGGTTGGGAGGCCAGAGAATaGTGGGGCAGGCCCACGGATGCAGGACCGAGGCAGGCGGCATTC | + |
Preference number: 5 (lower is better) Translates to: AAGPAIGGRGWEARE*WGRPTDAGPRQAAF Trigger: GAATGCCGCCTGCCTCGGTCCTGCATCCGTGGGCCTGCCCCATCATTCTCTGGCCTCCCAACCTCTGCCTCCAATGGCGGGTCCTGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 90 bp | GGCAGGCCCACGGATGCAGGACCGAGGCAGGCGGCATTCTGGACCTaGATGGGAGTCACTGCTGCCGTGGGGCGTTCCTGGCTATGTGCT | + |
Preference number: 5 (lower is better) Translates to: GRPTDAGPRQAAFWT*MGVTAAVGRSWLCA Trigger: AGCACATAGCCAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCGCCTGCCTCGGTCCTGCATCCGTGGGCCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 90 bp | GGCCCACGGATGCAGGACCGAGGCAGGCGGCATTCTGGACCTGGATaGGAGTCACTGCTGCCGTGGGGCGTTCCTGGCTATGTGCTGCAA | + |
Preference number: 5 (lower is better) Translates to: GPRMQDRGRRHSGPG*ESLLPWGVPGYVLQ Trigger: TTGCAGCACATAGCCAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCGCCTGCCTCGGTCCTGCATCCGTGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 90 bp | TCGACTGATGCTGACGGCAGCACCGTGGGCAGCAGGACCCGCCATTaGAGGCAGAGGTTGGGAGGCCAGAGAATGATGGGGCAGGCCCAC | + |
Preference number: 5 (lower is better) Translates to: STDADGSTVGSRTRH*RQRLGGQRMMGQAH Trigger: GTGGGCCTGCCCCATCATTCTCTGGCCTCCCAACCTCTGCCTCCAATGGCGGGTCCTGCTGCCCACGGTGCTGCCGTCAGCATCAGTCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 90 bp | CAGGCCATGGGGGCATTGGTTCGACTGATGCTGACGGCAGCACCGTaGGCAGCAGGACCCGCCATTGGAGGCAGAGGTTGGGAGGCCAGA | + |
Preference number: 5 (lower is better) Translates to: QAMGALVRLMLTAAP*AAGPAIGGRGWEAR Trigger: TCTGGCCTCCCAACCTCTGCCTCCAATGGCGGGTCCTGCTGCCCACGGTGCTGCCGTCAGCATCAGTCGAACCAATGCCCCCATGGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 90 bp | AGGCAGAGGTTGGGAGGCCAGAGAATGATGGGGCAGGCCCACGGATaGAGGACCGAGGCAGGCGGCATTCTGGACCTGGATGGGAGTCAC | + |
Preference number: 5 (lower is better) Translates to: RQRLGGQRMMGQAHG*RTEAGGILDLDGSH Trigger: GTGACTCCCATCCAGGTCCAGAATGCCGCCTGCCTCGGTCCTGCATCCGTGGGCCTGCCCCATCATTCTCTGGCCTCCCAACCTCTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 90 bp | GAGGTGGTGGAGCAATGGGCACTGCGGAGTCCAGGGAGCTTGTCTTaGGGTGGAAGGCATCCTGGGCTAGGGCTGCTGTTCCAGCGGCCA | + |
Preference number: 5 (lower is better) Translates to: EVVEQWALRSPGSLS*GGRHPGLGLLFQRP Trigger: TGGCCGCTGGAACAGCAGCCCTAGCCCAGGATGCCTTCCACCGCAAGACAAGCTCCCTGGACTCCGCAGTGCCCATTGCTCCACCACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 90 bp | GGTGGAGCAATGGGCACTGCGGAGTCCAGGGAGCTTGTCTTGCGGTaGAAGGCATCCTGGGCTAGGGCTGCTGTTCCAGCGGCCACTGGA | + |
Preference number: 5 (lower is better) Translates to: GGAMGTAESRELVLR*KASWARAAVPAATG Trigger: TCCAGTGGCCGCTGGAACAGCAGCCCTAGCCCAGGATGCCTTCCACCGCAAGACAAGCTCCCTGGACTCCGCAGTGCCCATTGCTCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 90 bp | CAGGTGGTCCCGCCGCCCCCACCAGGGCCGGGTTTCCAAGGCCTCTaGTTGATGCCATCCAGAAGTCTGACCAGTAGGATGTTACTGGGG | + |
Preference number: 5 (lower is better) Translates to: QVVPPPPPGPGFQGL*LMPSRSLTSRMLLG Trigger: CCCCAGTAACATCCTACTGGTCAGACTTCTGGATGGCATCAAGCAGAGGCCTTGGAAACCCGGCCCTGGTGGGGGCGGCGGGACCACCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 90 bp | CTGGTGTTCTTCTTGGTGTCGGGGTGCTTTGAGGCAGAGGTGCTCTaGGCCGTCGCTGAGGGGCATTCTGCCGTGTCCACTCCTGGCACG | + |
Preference number: 5 (lower is better) Translates to: LVFFLVSGCFEAEVL*AVAEGHSAVSTPGT Trigger: CGTGCCAGGAGTGGACACGGCAGAATGCCCCTCAGCGACGGCGCAGAGCACCTCTGCCTCAAAGCACCCCGACACCAAGAAGAACACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 90 bp | AGGACCGAGGCAGGCGGCATTCTGGACCTGGATGGGAGTCACTGCTaGCGTGGGGCGTTCCTGGCTATGTGCTGCAACTGTCCTCACAGC | + |
Preference number: 5 (lower is better) Translates to: RTEAGGILDLDGSHC*RGAFLAMCCNCPHS Trigger: GCTGTGAGGACAGTTGCAGCACATAGCCAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCGCCTGCCTCGGTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 90 bp | TGCAGGACCGAGGCAGGCGGCATTCTGGACCTGGATGGGAGTCACTaGTGCCGTGGGGCGTTCCTGGCTATGTGCTGCAACTGTCCTCAC | + |
Preference number: 5 (lower is better) Translates to: CRTEAGGILDLDGSH*CRGAFLAMCCNCPH Trigger: GTGAGGACAGTTGCAGCACATAGCCAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCGCCTGCCTCGGTCCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 90 bp | GGCACTGCGGAGTCCAGGGAGCTTGTCTTGCGGTGGAAGGCATCCTaGGCTAGGGCTGCTGTTCCAGCGGCCACTGGACCATCACCATCT | + |
Preference number: 5 (lower is better) Translates to: GTAESRELVLRWKAS*ARAAVPAATGPSPS Trigger: AGATGGTGATGGTCCAGTGGCCGCTGGAACAGCAGCCCTAGCCCAGGATGCCTTCCACCGCAAGACAAGCTCCCTGGACTCCGCAGTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | AGTCAGGCATGGTGGTGCACAGCAAGAGCGCCAGACACTAGGCTGGCTGAGGTGCAGCAGGACCCGCCATaGGAGGCAGAGGTTGGGAGG | + |
Preference number: 5 (lower is better) Translates to: SQAWWCTARAPDTRLAEVQQDPP*EAEVGR Trigger: CCTCCCAACCTCTGCCTCCAATGGCGGGTCCTGCTG...CACCTCAGCCAGCCTAGTGTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS GCA 90 bp | GCTTCCTGGTGTTCTTCTTGGTGTCGGGGTGCTTTGAGGCAGAGGTaGTCTGCGCCGTCGCTGAGGGGCATTCTGCCGTGTCCACTCCTG | + |
Preference number: 5 (lower is better) Translates to: ASWCSSWCRGALRQR*SAPSLRGILPCPLL Trigger: CAGGAGTGGACACGGCAGAATGCCCCTCAGCGACGGCGCAGAGCACCTCTGCCTCAAAGCACCCCGACACCAAGAAGAACACCAGGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 90 bp | GAGGCCGTAAATGTGCAATCTGTTCAGAGGACCCCATCACAGGCCTaGGTCCCATTCCAGCAGCGGCGGCGGCAGCAGCAGCAGCAACAG | + |
Preference number: 5 (lower is better) Translates to: EAVNVQSVQRTPSQA*VPFQQRRRQQQQQQ Trigger: CTGTTGCTGCTGCTGCTGCCGCCGCCGCTGCTGGAATGGGACCCAGGCCTGTGATGGGGTCCTCTGAACAGATTGCACATTTACGGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 90 bp | CGAGGCAGGCGGCATTCTGGACCTGGATGGGAGTCACTGCTGCCGTaGGGCGTTCCTGGCTATGTGCTGCAACTGTCCTCACAGCATTGC | + |
Preference number: 5 (lower is better) Translates to: RGRRHSGPGWESLLP*GVPGYVLQLSSQHC Trigger: GCAATGCTGTGAGGACAGTTGCAGCACATAGCCAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCGCCTGCCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 90 bp | GGATGGTCACTGTGCGACCACTGGGCTCTGTCTCCAACACGGCACTaGTCATATTTGGGGAGGCCAGAGAAGCCCCTGCAGCGCAGGCCA | + |
Preference number: 5 (lower is better) Translates to: GWSLCDHWALSPTRH*SYLGRPEKPLQRRP Trigger: TGGCCTGCGCTGCAGGGGCTTCTCTGGCCTCCCCAAATATGACCAGTGCCGTGTTGGAGACAGAGCCCAGTGGTCGCACAGTGACCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | AGTCAGGCATGGTGGTGCACAGCAAGAGCGCCAGACACTAGGCTGGCTGAGGTGTGGTGTCGGGGTGCTTaGAGGCAGAGGTGCTCTGCG | + |
Preference number: 5 (lower is better) Translates to: SQAWWCTARAPDTRLAEVWCRGA*RQRCSA Trigger: CGCAGAGCACCTCTGCCTCAAAGCACCCCGACACCA...CACCTCAGCCAGCCTAGTGTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS GCA 90 bp | ATTTCCGGCCACGCCGTTTCCTTGGGGCTTCTGTGTAGGTCCTCCTaGAGTGGAAGGGCTGACCATGGTCACCCCGCGACTTGCTTGACC | + |
Preference number: 5 (lower is better) Translates to: ISGHAVSLGLLCRSS*SGRADHGHPATCLT Trigger: GGTCAAGCAAGTCGCGGGGTGACCATGGTCAGCCCTTCCACTGCAGGAGGACCTACACAGAAGCCCCAAGGAAACGGCGTGGCCGGAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 90 bp | CTGGAGATGTGGGGAGTCCAGGGAGGATGGTCACTGTGCGACCACTaGGCTCTGTCTCCAACACGGCACTGGTCATATTTGGGGAGGCCA | + |
Preference number: 5 (lower is better) Translates to: LEMWGVQGGWSLCDH*ALSPTRHWSYLGRP Trigger: TGGCCTCCCCAAATATGACCAGTGCCGTGTTGGAGACAGAGCCCAGTGGTCGCACAGTGACCATCCTCCCTGGACTCCCCACATCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 90 bp | CAGCTGAACTGTTCCCACACGCTGATGCAGCACTCTCTGGAGATGTaGGGAGTCCAGGGAGGATGGTCACTGTGCGACCACTGGGCTCTG | + |
Preference number: 5 (lower is better) Translates to: QLNCSHTLMQHSLEM*GVQGGWSLCDHWAL Trigger: CAGAGCCCAGTGGTCGCACAGTGACCATCCTCCCTGGACTCCCCACATCTCCAGAGAGTGCTGCATCAGCGTGTGGGAACAGTTCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | CACAATTGTAAGGTGTGGGCACAGCCACTCCCAGCAAGCCTTGCCGAACAGTCCTGGTGTCGGGGTGCTTaGAGGCAGAGGTGCTCTGCG | + |
Preference number: 5 (lower is better) Translates to: HNCKVWAQPLPASLAEQSWCRGA*RQRCSA Trigger: CGCAGAGCACCTCTGCCTCAAAGCACCCCGACACCA...GGACTGTTCGGCAAGGCTTGCTGGGAGTGGCTGTGCCCACACCTTACAATTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS GCA 90 bp | GAGCTCTGCAGATCTTTCGAGCCACAATTAACCACAGTGCTGCCCTaGGCCCTTAATGTGTTTGTGCAGGTGGTCCCGCCGCCCCCACCA | + |
Preference number: 5 (lower is better) Translates to: ELCRSFEPQLTTVLP*ALNVFVQVVPPPPP Trigger: TGGTGGGGGCGGCGGGACCACCTGCACAAACACATTAAGGGCGCAGGGCAGCACTGTGGTTAATTGTGGCTCGAAAGATCTGCAGAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS TCA 90 bp | GCTCGTCGACCCCAGAGCCAACAAGAGTCCGGCATTCGGGACATCTaGGTTCATTCCGGGAACCCACAATCCCCAGCAAACAGCGTTTGC | + |
Preference number: 5 (lower is better) Translates to: ARRPQSQQESGIRDI*VHSGNPQSPANSVC Trigger: GCAAACGCTGTTTGCTGGGGATTGTGGGTTCCCGGAATGAACTCAGATGTCCCGAATGCCGGACTCTTGTTGGCTCTGGGGTCGACGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS TCA 90 bp | CCTCCTGCAGTGGAAGGGCTGACCATGGTCACCCCGCGACTTGCTTaGCCCGCAGTAGACATAGAGACTTTAGCTTGGGAGGCATTCGTC | + |
Preference number: 5 (lower is better) Translates to: PPAVEGLTMVTPRLA*PAVDIETLAWEAFV Trigger: GACGAATGCCTCCCAAGCTAAAGTCTCTATGTCTACTGCGGGTCAAGCAAGTCGCGGGGTGACCATGGTCAGCCCTTCCACTGCAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 90 bp | CAGCACTCTCTGGAGATGTGGGGAGTCCAGGGAGGATGGTCACTGTaGGACCACTGGGCTCTGTCTCCAACACGGCACTGGTCATATTTG | + |
Preference number: 5 (lower is better) Translates to: QHSLEMWGVQGGWSL*DHWALSPTRHWSYL Trigger: CAAATATGACCAGTGCCGTGTTGGAGACAGAGCCCAGTGGTCGCACAGTGACCATCCTCCCTGGACTCCCCACATCTCCAGAGAGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | TTTCCTAGCAAGACTACAAGTCAGGCATGGTGGTGCACAGCAAGAGCGCCAGACGGCCACGCCGTTTCCTaGGGGCTTCTGTGTAGGTCC | + |
Preference number: 5 (lower is better) Translates to: FPSKTTSQAWWCTARAPDGHAVS*GLLCRS Trigger: GGACCTACACAGAAGCCCCAAGGAAACGGCGTGGCC...GTCTGGCGCTCTTGCTGTGCACCACCATGCCTGACTTGTAGTCTTGCTAGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS TCA 90 bp | AAGTGGAGGATTCATACTTCCAAGGGCAGCTTGGTAGGGGACATCTaGAGGGAACGTGAACGCAGGGCCAGTTGTCACCGGGCTGCTAGG | + |
Preference number: 5 (lower is better) Translates to: KWRIHTSKGSLVGDI*RERERRASCHRAAR Trigger: CCTAGCAGCCCGGTGACAACTGGCCCTGCGTTCACGTTCCCTTCAGATGTCCCCTACCAAGCTGCCCTTGGAAGTATGAATCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS TCA 90 bp | CGTTCCTGGCTATGTGCTGCAACTGTCCTCACAGCATTGCGGGCCTaGTTGACTGTCATCTGCCCAGACATGTGCAGCAGGACCTTAGCC | + |
Preference number: 5 (lower is better) Translates to: RSWLCAATVLTALRA*LTVICPDMCSRTLA Trigger: GGCTAAGGTCCTGCTGCACATGTCTGGGCAGATGACAGTCAATCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCACATAGCCAGGAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 90 bp | AGGTCCTCCTGCAGTGGAAGGGCTGACCATGGTCACCCCGCGACTTaGTTGACCCGCAGTAGACATAGAGACTTTAGCTTGGGAGGCATT | + |
Preference number: 5 (lower is better) Translates to: RSSCSGRADHGHPAT*LTRSRHRDFSLGGI Trigger: AATGCCTCCCAAGCTAAAGTCTCTATGTCTACTGCGGGTCAAGCAAGTCGCGGGGTGACCATGGTCAGCCCTTCCACTGCAGGAGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | AGGGGCAGGGGCAGGGAAGAGATCGCTGTGTATGTTAAACCTCCTGTTATCGGTGCTGCGGCTGTGGGGTaGCTGGAACTGATGAGCACA | + |
Preference number: 5 (lower is better) Translates to: RGRGREEIAVYVKPPVIGAAAVG*LELMST Trigger: TGTGCTCATCAGTTCCAGCAACCCCACAGCCGCAGC...ACCGATAACAGGAGGTTTAACATACACAGCGATCTCTTCCCTGCCCCTGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CAA 90 bp | TACACACACCATGCACAGTCCACACCACTGTGGGAATCCGGTATCACATGCAAGCCCTGGGAAGACTTGTaGGCCATGGTGAGGGAGGTG | + |
Preference number: 5 (lower is better) Translates to: YTHHAQSTPLWESGITCKPWEDL*AMVREV Trigger: CACCTCCCTCACCATGGCCAACAAGTCTTCCCAGGG...CTTGCATGTGATACCGGATTCCCACAGTGGTGTGGACTGTGCATGGTGTGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CAA 90 bp | CTGAGAACACAATGGACACGGAGGAACAGAAGGATCTCTGTGTTGGGAGGGAACCCCTGGGAAGACTTGTaGGCCATGGTGAGGGAGGTG | + |
Preference number: 5 (lower is better) Translates to: LRTQWTRRNRRISVLGGNPWEDL*AMVREV Trigger: CACCTCCCTCACCATGGCCAACAAGTCTTCCCAGGG...GTTCCCTCCCAACACAGAGATCCTTCTGTTCCTCCGTGTCCATTGTGTTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS CCA 90 bp | CGGGAACCCACAATCCCCAGCAAACAGCGTTTGCAAAAGGTATGCTaGCAGGGTAAGACCTTTGCGGAAGCATCCAGGCGTTCTAGACAC | + |
Preference number: 5 (lower is better) Translates to: REPTIPSKQRLQKVC*QGKTFAEASRRSRH Trigger: GTGTCTAGAACGCCTGGATGCTTCCGCAAAGGTCTTACCCTGCCAGCATACCTTTTGCAAACGCTGTTTGCTGGGGATTGTGGGTTCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | AACTACGGTTCAAAGCCACTCACACACAGAGACTACCACTTTCTCTCACTTCCCGGCCACGCCGTTTCCTaGGGGCTTCTGTGTAGGTCC | + |
Preference number: 5 (lower is better) Translates to: NYGSKPLTHRDYHFLSLPGHAVS*GLLCRS Trigger: GGACCTACACAGAAGCCCCAAGGAAACGGCGTGGCC...GGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTGGCTTTGAACCGTAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS GCA 90 bp | TTCCGGGAACCCACAATCCCCAGCAAACAGCGTTTGCAAAAGGTATaGTGGCAGGGTAAGACCTTTGCGGAAGCATCCAGGCGTTCTAGA | + |
Preference number: 5 (lower is better) Translates to: FREPTIPSKQRLQKV*WQGKTFAEASRRSR Trigger: TCTAGAACGCCTGGATGCTTCCGCAAAGGTCTTACCCTGCCAGCATACCTTTTGCAAACGCTGTTTGCTGGGGATTGTGGGTTCCCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 90 bp | CCTATCTTGCTGGTATGCATCGATGTCCCTTTGTACCAGCCGTCCTaGCAACGCTCAAACACCAAAAACATCTCCCCTTTCCTCAGCTCC | + |
Preference number: 5 (lower is better) Translates to: PILLVCIDVPLYQPS*QRSNTKNISPFLSS Trigger: GGAGCTGAGGAAAGGGGAGATGTTTTTGGTGTTTGAGCGTTGCCAGGACGGCTGGTACAAAGGGACATCGATGCATACCAGCAAGATAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | GGAGCAAACATACTTAAGACATCTCGGTCAGTAGTGGTGGTGGTGGTGGGGGCAGGGAAAACGCCTATCTaGCTGGTATGCATCGATGTC | + |
Preference number: 5 (lower is better) Translates to: GANILKTSRSVVVVVVGAGKTPI*LVCIDV Trigger: GACATCGATGCATACCAGCAAGATAGGCGTTTTCCC...TGCCCCCACCACCACCACCACTACTGACCGAGATGTCTTAAGTATGTTTGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CAA 90 bp | CTGAGAACACAATGGACACGGAGGAACAGAAGGATCTCTGTGTTGGGAGGGAACGGGAAAACGCCTATCTaGCTGGTATGCATCGATGTC | + |
Preference number: 5 (lower is better) Translates to: LRTQWTRRNRRISVLGGNGKTPI*LVCIDV Trigger: GACATCGATGCATACCAGCAAGATAGGCGTTTTCCC...GTTCCCTCCCAACACAGAGATCCTTCTGTTCCTCCGTGTCCATTGTGTTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | TTAACCAGCGTTATACCAGGAAGCTATTACCACGGATACTTCAATCACATAGCTCAGCAGGACCCGCCATaGGAGGCAGAGGTTGGGAGG | + |
Preference number: 5 (lower is better) Translates to: LTSVIPGSYYHGYFNHIAQQDPP*EAEVGR Trigger: CCTCCCAACCTCTGCCTCCAATGGCGGGTCCTGCTG...AGCTATGTGATTGAAGTATCCGTGGTAATAGCTTCCTGGTATAACGCTGGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CAA 90 bp | AGTCCATTAGACATTACAAGGCACACTTTACACATCAGAACCCAGAGAGACGGACGGCACTGGTCATATTaGGGGAGGCCAGAGAAGCCC | + |
Preference number: 5 (lower is better) Translates to: SPLDITRHTLHIRTQRDGRHWSY*GRPEKP Trigger: GGGCTTCTCTGGCCTCCCCAAATATGACCAGTGCCG...TCCGTCTCTCTGGGTTCTGATGTGTAAAGTGTGCCTTGTAATGTCTAATGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CAA 90 bp | AACTACGGTTCAAAGCCACTCACACACAGAGACTACCACTTTCTCTCACTTCCCCTCTGTAACGTGCCTTaGAACCAGCCGTCCTCTCGT | + |
Preference number: 5 (lower is better) Translates to: NYGSKPLTHRDYHFLSLPLCNVP*NQPSSR Trigger: ACGAGAGGACGGCTGGTTCAAAGGCACGTTACAGAG...GGGAAGTGAGAGAAAGTGGTAGTCTCTGTGTGTGAGTGGCTTTGAACCGTAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CAA 90 bp | CTGAGAACACAATGGACACGGAGGAACAGAAGGATCTCTGTGTTGGGAGGGAACATGATGATGTCGCCTTaGCTGAACTTAAGGTCTCCG | + |
Preference number: 5 (lower is better) Translates to: LRTQWTRRNRRISVLGGNMMMSP*LNLRSP Trigger: CGGAGACCTTAAGTTCAGCAAAGGCGACATCATCAT...GTTCCCTCCCAACACAGAGATCCTTCTGTTCCTCCGTGTCCATTGTGTTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | CTTACCACCACTGTCTCACAAACTTTTACTGTGTCTTGGGGCATGCGGATCACTTTCCTGGTGTTCTTCTaGGTGTCGGGGTGCTTTGAG | + |
Preference number: 5 (lower is better) Translates to: LTTTVSQTFTVSWGMRITFLVFF*VSGCFE Trigger: CTCAAAGCACCCCGACACCAAGAAGAACACCAGGAA...AGTGATCCGCATGCCCCAAGACACAGTAAAAGTTTGTGAGACAGTGGTGGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CAA 90 bp | CAACCTTTGGGTTGTGACCTCCGGACAACTGATTCATACAGTAGCACAATTCCATTCCTGGTGTTCTTCTaGGTGTCGGGGTGCTTTGAG | + |
Preference number: 5 (lower is better) Translates to: QPLGCDLRTTDSYSSTIPFLVFF*VSGCFE Trigger: CTCAAAGCACCCCGACACCAAGAAGAACACCAGGAA...TGGAATTGTGCTACTGTATGAATCAGTTGTCCGGAGGTCACAACCCAAAGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | CAAAGCCAAAATCGCTCTAAGAATGCTGATCATTCTGAGTCTATGAACCAAGAAGCTGCGGCTGTGGGGTaGCTGGAACTGATGAGCACA | + |
Preference number: 5 (lower is better) Translates to: QSQNRSKNADHSESMNQEAAAVG*LELMST Trigger: TGTGCTCATCAGTTCCAGCAACCCCACAGCCGCAGC...TTCTTGGTTCATAGACTCAGAATGATCAGCATTCTTAGAGCGATTTTGGCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | ATGAACCAAGAAAGCCATGGGAACCTACGCTGTGTTCTGTCTCAGGAGACAGGATCTTTCTTACTGTCCTaGTCTGGTTTCCCAGCTGAA | + |
Preference number: 5 (lower is better) Translates to: MNQESHGNLRCVLSQETGSFLLS*SGFPAE Trigger: TTCAGCTGGGAAACCAGACAAGGACAGTAAGAAAGA...TCCTGTCTCCTGAGACAGAACACAGCGTAGGTTCCCATGGCTTTCTTGGTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | TTAACCAGCGTTATACCAGGAAGCTATTACCACGGATACTTCAATCACATAGCTATGATCTGCACGAAGTaGGTGGGGAAAAAGCCGTGG | + |
Preference number: 5 (lower is better) Translates to: LTSVIPGSYYHGYFNHIAMICTK*VGKKPW Trigger: CCACGGCTTTTTCCCCACCAACTTCGTGCAGATCAT...AGCTATGTGATTGAAGTATCCGTGGTAATAGCTTCCTGGTATAACGCTGGTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CAA 90 bp | ATTTTTAGGGTAACATGTCATTTCAAAGCTGGCTTAATATCAGTCAGAGCTACACGGCACTGGTCATATTaGGGGAGGCCAGAGAAGCCC | + |
Preference number: 5 (lower is better) Translates to: IFRVTCHFKAGLISVRATRHWSY*GRPEKP Trigger: GGGCTTCTCTGGCCTCCCCAAATATGACCAGTGCCG...TGTAGCTCTGACTGATATTAAGCCAGCTTTGAAATGACATGTTACCCTAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | GCTGTCTGTTTGGAAAACTGGCATTTTTGTCTAAACGGAGCCAAATATAACGGCATGATGATGTCGCCTTaGCTGAACTTAAGGTCTCCG | + |
Preference number: 5 (lower is better) Translates to: AVCLENWHFCLNGAKYNGMMMSP*LNLRSP Trigger: CGGAGACCTTAAGTTCAGCAAAGGCGACATCATCAT...GCCGTTATATTTGGCTCCGTTTAGACAAAAATGCCAGTTTTCCAAACAGACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CAA 90 bp | ATCTTCTGCTCGGTTCTTGAAGATCTGGAAGTCCACAGATGTGCTCTTTCTATGACAATATCTCCTTCCTaGAGTTCAAGTTCGGCCTCA | + |
Preference number: 5 (lower is better) Translates to: IFCSVLEDLEVHRCALSMTISPS*SSSSAS Trigger: TGAGGCCGAACTTGAACTCAAGGAAGGAGATATTGT...CATAGAAAGAGCACATCTGTGGACTTCCAGATCTTCAAGAACCGAGCAGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CAA 90 bp | ATTTTTAGGGTAACATGTCATTTCAAAGCTGGCTTAATATCAGTCAGAGCTACAATGATCTGCACGAAGTaGGTGGGGAAAAAGCCGTGG | + |
Preference number: 5 (lower is better) Translates to: IFRVTCHFKAGLISVRATMICTK*VGKKPW Trigger: CCACGGCTTTTTCCCCACCAACTTCGTGCAGATCAT...TGTAGCTCTGACTGATATTAAGCCAGCTTTGAAATGACATGTTACCCTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000209611.2 |
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CDS-3UTR CAA 90 bp | AAAAGCCCAATACAAAACCCACACATTATATCACCTAGTGATCTACCAACAGATCACTCTATCAGCTGCTaGGCAGCTGAGTTAAACTCC | + |
Preference number: 5 (lower is better) Translates to: KSPIQNPHIISPSDLPTDHSISC*AAELNS Trigger: GGAGTTTAACTCAGCTGCCAAGCAGCTGATAGAGTG...ATCTGTTGGTAGATCACTAGGTGATATAATGTGTGGGTTTTGTATTGGGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS-3UTR CAA 90 bp | ATTTCCAGTCAATGGTTGTGCTTTAGTTTGCGTCTTTCTTTACCCACTTCGTTTTCTTTCTTACTGTCCTaGTCTGGTTTCCCAGCTGAA | + |
Preference number: 5 (lower is better) Translates to: ISSQWLCFSLRLSLPTSFSFLLS*SGFPAE Trigger: TTCAGCTGGGAAACCAGACAAGGACAGTAAGAAAGA...AAACGAAGTGGGTAAAGAAAGACGCAAACTAAAGCACAACCATTGACTGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034060.7 |
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CDS CCA 72 bp | AGGCCCACGGATGCAGGACCGAGGCAGGCGGCATTCTaGACCTGGATGGGAGTCACTGCTGCCGTGGGGCGT | + |
Preference number: 6 (lower is better) Translates to: RPTDAGPRQAAF*TWMGVTAAVGR Trigger: ACGCCCCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCGCCTGCCTCGGTCCTGCATCCGTGGGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS TCA 72 bp | CCCGCCATTGGAGGCAGAGGTTGGGAGGCCAGAGAATaGTGGGGCAGGCCCACGGATGCAGGACCGAGGCAG | + |
Preference number: 6 (lower is better) Translates to: PAIGGRGWEARE*WGRPTDAGPRQ Trigger: CTGCCTCGGTCCTGCATCCGTGGGCCTGCCCCATCATTCTCTGGCCTCCCAACCTCTGCCTCCAATGGCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | ACGGATGCAGGACCGAGGCAGGCGGCATTCTGGACCTaGATGGGAGTCACTGCTGCCGTGGGGCGTTCCTGG | + |
Preference number: 6 (lower is better) Translates to: TDAGPRQAAFWT*MGVTAAVGRSW Trigger: CCAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCGCCTGCCTCGGTCCTGCATCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | GCTGACGGCAGCACCGTGGGCAGCAGGACCCGCCATTaGAGGCAGAGGTTGGGAGGCCAGAGAATGATGGGG | + |
Preference number: 6 (lower is better) Translates to: ADGSTVGSRTRH*RQRLGGQRMMG Trigger: CCCCATCATTCTCTGGCCTCCCAACCTCTGCCTCCAATGGCGGGTCCTGCTGCCCACGGTGCTGCCGTCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | GCCAGAGAAGCCCCTGCAGCGCAGGCCATGGGGGCATaGGTTCGACTGATGCTGACGGCAGCACCGTGGGCA | + |
Preference number: 6 (lower is better) Translates to: AREAPAAQAMGA*VRLMLTAAPWA Trigger: TGCCCACGGTGCTGCCGTCAGCATCAGTCGAACCAATGCCCCCATGGCCTGCGCTGCAGGGGCTTCTCTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 90 bp | CGAGGTGGTGGAGCAATGGGCACTGCGGAGTCCAGGGAGCTTGTCTaGCGGTGGAAGGCATCCTGGGCTAGGGCTGCTGTTCCAGCGGCC | + |
Preference number: 6 (lower is better) Translates to: RGGGAMGTAESRELV*RWKASWARAAVPAA Trigger: GGCCGCTGGAACAGCAGCCCTAGCCCAGGATGCCTTCCACCGCAAGACAAGCTCCCTGGACTCCGCAGTGCCCATTGCTCCACCACCTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 90 bp | CCTGGCGAGGTGGTGGAGCAATGGGCACTGCGGAGTCCAGGGAGCTaGTCTTGCGGTGGAAGGCATCCTGGGCTAGGGCTGCTGTTCCAG | + |
Preference number: 6 (lower is better) Translates to: PGEVVEQWALRSPGS*SCGGRHPGLGLLFQ Trigger: CTGGAACAGCAGCCCTAGCCCAGGATGCCTTCCACCGCAAGACAAGCTCCCTGGACTCCGCAGTGCCCATTGCTCCACCACCTCGCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | CCGCCGCCCCCACCAGGGCCGGGTTTCCAAGGCCTCTaGTTGATGCCATCCAGAAGTCTGACCAGTAGGATG | + |
Preference number: 6 (lower is better) Translates to: PPPPPGPGFQGL*LMPSRSLTSRM Trigger: CATCCTACTGGTCAGACTTCTGGATGGCATCAAGCAGAGGCCTTGGAAACCCGGCCCTGGTGGGGGCGGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | GAGGCAGGCGGCATTCTGGACCTGGATGGGAGTCACTaGTGCCGTGGGGCGTTCCTGGCTATGTGCTGCAAC | + |
Preference number: 6 (lower is better) Translates to: EAGGILDLDGSH*CRGAFLAMCCN Trigger: GTTGCAGCACATAGCCAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCGCCTGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | ATGCAGGACCGAGGCAGGCGGCATTCTGGACCTGGATaGGAGTCACTGCTGCCGTGGGGCGTTCCTGGCTAT | + |
Preference number: 6 (lower is better) Translates to: MQDRGRRHSGPG*ESLLPWGVPGY Trigger: ATAGCCAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCGCCTGCCTCGGTCCTGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | GAGTCCAGGGAGCTTGTCTTGCGGTGGAAGGCATCCTaGGCTAGGGCTGCTGTTCCAGCGGCCACTGGACCA | + |
Preference number: 6 (lower is better) Translates to: ESRELVLRWKAS*ARAAVPAATGP Trigger: TGGTCCAGTGGCCGCTGGAACAGCAGCCCTAGCCCAGGATGCCTTCCACCGCAAGACAAGCTCCCTGGACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | GTCGCTTCCTGGTGTTCTTCTTGGTGTCGGGGTGCTTaGAGGCAGAGGTGCTCTGCGCCGTCGCTGAGGGGC | + |
Preference number: 6 (lower is better) Translates to: VASWCSSWCRGA*RQRCSAPSLRG Trigger: GCCCCTCAGCGACGGCGCAGAGCACCTCTGCCTCAAAGCACCCCGACACCAAGAAGAACACCAGGAAGCGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | GGGGACGACGCTGGGATTTCCGGCCACGCCGTTTCCTaGGGGCTTCTGTGTAGGTCCTCCTGCAGTGGAAGG | + |
Preference number: 6 (lower is better) Translates to: GDDAGISGHAVS*GLLCRSSCSGR Trigger: CCTTCCACTGCAGGAGGACCTACACAGAAGCCCCAAGGAAACGGCGTGGCCGGAAATCCCAGCGTCGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 90 bp | CACAGCCGTGGGGACGACGCTGGGATTTCCGGCCACGCCGTTTCCTaGGGGCTTCTGTGTAGGTCCTCCTGCAGTGGAAGGGCTGACCAT | + |
Preference number: 6 (lower is better) Translates to: HSRGDDAGISGHAVS*GLLCRSSCSGRADH Trigger: ATGGTCAGCCCTTCCACTGCAGGAGGACCTACACAGAAGCCCCAAGGAAACGGCGTGGCCGGAAATCCCAGCGTCGTCCCCACGGCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | TTCTTGGTGTCGGGGTGCTTTGAGGCAGAGGTGCTCTaGGCCGTCGCTGAGGGGCATTCTGCCGTGTCCACT | + |
Preference number: 6 (lower is better) Translates to: FLVSGCFEAEVL*AVAEGHSAVST Trigger: AGTGGACACGGCAGAATGCCCCTCAGCGACGGCGCAGAGCACCTCTGCCTCAAAGCACCCCGACACCAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | CACGCCGTTTCCTTGGGGCTTCTGTGTAGGTCCTCCTaGAGTGGAAGGGCTGACCATGGTCACCCCGCGACT | + |
Preference number: 6 (lower is better) Translates to: HAVSLGLLCRSS*SGRADHGHPAT Trigger: AGTCGCGGGGTGACCATGGTCAGCCCTTCCACTGCAGGAGGACCTACACAGAAGCCCCAAGGAAACGGCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | GCAGGCGGCATTCTGGACCTGGATGGGAGTCACTGCTaGCGTGGGGCGTTCCTGGCTATGTGCTGCAACTGT | + |
Preference number: 6 (lower is better) Translates to: AGGILDLDGSHC*RGAFLAMCCNC Trigger: ACAGTTGCAGCACATAGCCAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | CTGGAGATGTGGGGAGTCCAGGGAGGATGGTCACTGTaGGACCACTGGGCTCTGTCTCCAACACGGCACTGG | + |
Preference number: 6 (lower is better) Translates to: LEMWGVQGGWSL*DHWALSPTRHW Trigger: CCAGTGCCGTGTTGGAGACAGAGCCCAGTGGTCGCACAGTGACCATCCTCCCTGGACTCCCCACATCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | TATGAGCTGCTGACACCACAGCCGTGGGGACGACGCTaGGATTTCCGGCCACGCCGTTTCCTTGGGGCTTCT | + |
Preference number: 6 (lower is better) Translates to: YELLTPQPWGRR*DFRPRRFLGAS Trigger: AGAAGCCCCAAGGAAACGGCGTGGCCGGAAATCCCAGCGTCGTCCCCACGGCTGTGGTGTCAGCAGCTCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | TGTTCTTCTTGGTGTCGGGGTGCTTTGAGGCAGAGGTaGTCTGCGCCGTCGCTGAGGGGCATTCTGCCGTGT | + |
Preference number: 6 (lower is better) Translates to: CSSWCRGALRQR*SAPSLRGILPC Trigger: ACACGGCAGAATGCCCCTCAGCGACGGCGCAGAGCACCTCTGCCTCAAAGCACCCCGACACCAAGAAGAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | GAGTGTCGCTTCCTGGTGTTCTTCTTGGTGTCGGGGTaGTTTGAGGCAGAGGTGCTCTGCGCCGTCGCTGAG | + |
Preference number: 6 (lower is better) Translates to: ECRFLVFFLVSG*FEAEVLCAVAE Trigger: CTCAGCGACGGCGCAGAGCACCTCTGCCTCAAAGCACCCCGACACCAAGAAGAACACCAGGAAGCGACACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | GACTTGTCTGGATATGAGCTGCTGACACCACAGCCGTaGGGACGACGCTGGGATTTCCGGCCACGCCGTTTC | + |
Preference number: 6 (lower is better) Translates to: DLSGYELLTPQP*GRRWDFRPRRF Trigger: GAAACGGCGTGGCCGGAAATCCCAGCGTCGTCCCCACGGCTGTGGTGTCAGCAGCTCATATCCAGACAAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | ACCTGGATGGGAGTCACTGCTGCCGTGGGGCGTTCCTaGCTATGTGCTGCAACTGTCCTCACAGCATTGCGG | + |
Preference number: 6 (lower is better) Translates to: TWMGVTAAVGRS*LCAATVLTALR Trigger: CCGCAATGCTGTGAGGACAGTTGCAGCACATAGCCAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | CGGCATTCTGGACCTGGATGGGAGTCACTGCTGCCGTaGGGCGTTCCTGGCTATGTGCTGCAACTGTCCTCA | + |
Preference number: 6 (lower is better) Translates to: RHSGPGWESLLP*GVPGYVLQLSS Trigger: TGAGGACAGTTGCAGCACATAGCCAGGAACGCCCCACGGCAGCAGTGACTCCCATCCAGGTCCAGAATGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | CTGTGCGACCACTGGGCTCTGTCTCCAACACGGCACTaGTCATATTTGGGGAGGCCAGAGAAGCCCCTGCAG | + |
Preference number: 6 (lower is better) Translates to: LCDHWALSPTRH*SYLGRPEKPLQ Trigger: CTGCAGGGGCTTCTCTGGCCTCCCCAAATATGACCAGTGCCGTGTTGGAGACAGAGCCCAGTGGTCGCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | TCCATGGAGTGGCGGTTCTGGGACCCCTGGGAAGACTaGTTGGCCATGGTGAGGGAGGTGAAGGAGTGTCGC | + |
Preference number: 6 (lower is better) Translates to: SMEWRFWDPWED*LAMVREVKECR Trigger: GCGACACTCCTTCACCTCCCTCACCATGGCCAACAAGTCTTCCCAGGGGTCCCAGAACCGCCACTCCATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | GTAGGTGATGCTGGAGGGGAGACTCGGGGCTTGCGTTaGGTGGAGGCACCAGAAAGCAGCTTCAGTAGGCCC | + |
Preference number: 6 (lower is better) Translates to: VGDAGGETRGLR*VEAPESSFSRP Trigger: GGGCCTACTGAAGCTGCTTTCTGGTGCCTCCACCAAACGCAAGCCCCGAGTCTCCCCTCCAGCATCACCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | GAACTGATGAGCACAGGAGGGCTGATCTCCATGGAGTaGCGGTTCTGGGACCCCTGGGAAGACTTGTTGGCC | + |
Preference number: 6 (lower is better) Translates to: ELMSTGGLISME*RFWDPWEDLLA Trigger: GGCCAACAAGTCTTCCCAGGGGTCCCAGAACCGCCACTCCATGGAGATCAGCCCTCCTGTGCTCATCAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | CAGCACTCTCTGGAGATGTGGGGAGTCCAGGGAGGATaGTCACTGTGCGACCACTGGGCTCTGTCTCCAACA | + |
Preference number: 6 (lower is better) Translates to: QHSLEMWGVQGG*SLCDHWALSPT Trigger: TGTTGGAGACAGAGCCCAGTGGTCGCACAGTGACCATCCTCCCTGGACTCCCCACATCTCCAGAGAGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | ATGGAGTGGCGGTTCTGGGACCCCTGGGAAGACTTGTaGGCCATGGTGAGGGAGGTGAAGGAGTGTCGCTTC | + |
Preference number: 6 (lower is better) Translates to: MEWRFWDPWEDL*AMVREVKECRF Trigger: GAAGCGACACTCCTTCACCTCCCTCACCATGGCCAACAAGTCTTCCCAGGGGTCCCAGAACCGCCACTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | TCCAGGGTAGGTGATGCTGGAGGGGAGACTCGGGGCTaGCGTTTGGTGGAGGCACCAGAAAGCAGCTTCAGT | + |
Preference number: 6 (lower is better) Translates to: SRVGDAGGETRG*RLVEAPESSFS Trigger: ACTGAAGCTGCTTTCTGGTGCCTCCACCAAACGCAAGCCCCGAGTCTCCCCTCCAGCATCACCTACCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 90 bp | AGCTCCACATCCAGGGTAGGTGATGCTGGAGGGGAGACTCGGGGCTaGCGTTTGGTGGAGGCACCAGAAAGCAGCTTCAGTAGGCCCTTT | + |
Preference number: 6 (lower is better) Translates to: SSTSRVGDAGGETRG*RLVEAPESSFSRPF Trigger: AAAGGGCCTACTGAAGCTGCTTTCTGGTGCCTCCACCAAACGCAAGCCCCGAGTCTCCCCTCCAGCATCACCTACCCTGGATGTGGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 90 bp | CACCCCGCGACTTGCTTGACCCGCAGTAGACATAGAGACTTTAGCTaGGGAGGCATTCGTCACCGCCCTTGTGACGGGCGCCACATAGTT | + |
Preference number: 6 (lower is better) Translates to: HPATCLTRSRHRDFS*GGIRHRPCDGRHIV Trigger: AACTATGTGGCGCCCGTCACAAGGGCGGTGACGAATGCCTCCCAAGCTAAAGTCTCTATGTCTACTGCGGGTCAAGCAAGTCGCGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | TGGGGAGTCCAGGGAGGATGGTCACTGTGCGACCACTaGGCTCTGTCTCCAACACGGCACTGGTCATATTTG | + |
Preference number: 6 (lower is better) Translates to: WGVQGGWSLCDH*ALSPTRHWSYL Trigger: CAAATATGACCAGTGCCGTGTTGGAGACAGAGCCCAGTGGTCGCACAGTGACCATCCTCCCTGGACTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | GTGATGCTGGAGGGGAGACTCGGGGCTTGCGTTTGGTaGAGGCACCAGAAAGCAGCTTCAGTAGGCCCTTTT | + |
Preference number: 6 (lower is better) Translates to: VMLEGRLGACVW*RHQKAASVGPF Trigger: AAAAGGGCCTACTGAAGCTGCTTTCTGGTGCCTCCACCAAACGCAAGCCCCGAGTCTCCCCTCCAGCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 90 bp | TCCTCCTGCAGTGGAAGGGCTGACCATGGTCACCCCGCGACTTGCTaGACCCGCAGTAGACATAGAGACTTTAGCTTGGGAGGCATTCGT | + |
Preference number: 6 (lower is better) Translates to: SSCSGRADHGHPATC*TRSRHRDFSLGGIR Trigger: ACGAATGCCTCCCAAGCTAAAGTCTCTATGTCTACTGCGGGTCAAGCAAGTCGCGGGGTGACCATGGTCAGCCCTTCCACTGCAGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS TCA 72 bp | CCCCAGAGCCAACAAGAGTCCGGCATTCGGGACATCTaGGTTCATTCCGGGAACCCACAATCCCCAGCAAAC | + |
Preference number: 6 (lower is better) Translates to: PQSQQESGIRDI*VHSGNPQSPAN Trigger: GTTTGCTGGGGATTGTGGGTTCCCGGAATGAACTCAGATGTCCCGAATGCCGGACTCTTGTTGGCTCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS TCA 72 bp | GTGGAAGGGCTGACCATGGTCACCCCGCGACTTGCTTaGCCCGCAGTAGACATAGAGACTTTAGCTTGGGAG | + |
Preference number: 6 (lower is better) Translates to: VEGLTMVTPRLA*PAVDIETLAWE Trigger: CTCCCAAGCTAAAGTCTCTATGTCTACTGCGGGTCAAGCAAGTCGCGGGGTGACCATGGTCAGCCCTTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS TCA 72 bp | GTGCTGCAACTGTCCTCACAGCATTGCGGGCCTGATTaGCTGTCATCTGCCCAGACATGTGCAGCAGGACCT | + |
Preference number: 6 (lower is better) Translates to: VLQLSSQHCGPD*LSSAQTCAAGP Trigger: AGGTCCTGCTGCACATGTCTGGGCAGATGACAGTCAATCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | GCTTGCACCCGAGGCTGCTGTCCACACTGGGAGCTCTaGAGATCTTTCGAGCCACAATTAACCACAGTGCTG | + |
Preference number: 6 (lower is better) Translates to: ACTRGCCPHWEL*RSFEPQLTTVL Trigger: CAGCACTGTGGTTAATTGTGGCTCGAAAGATCTGCAGAGCTCCCAGTGTGGACAGCAGCCTCGGGTGCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | ACTTGCTTGACCCGCAGTAGACATAGAGACTTTAGCTaGGGAGGCATTCGTCACCGCCCTTGTGACGGGCGC | + |
Preference number: 6 (lower is better) Translates to: TCLTRSRHRDFS*GGIRHRPCDGR Trigger: GCGCCCGTCACAAGGGCGGTGACGAATGCCTCCCAAGCTAAAGTCTCTATGTCTACTGCGGGTCAAGCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS TCA 72 bp | ATTCATACTTCCAAGGGCAGCTTGGTAGGGGACATCTaGAGGGAACGTGAACGCAGGGCCAGTTGTCACCGG | + |
Preference number: 6 (lower is better) Translates to: IHTSKGSLVGDI*RERERRASCHR Trigger: CCGGTGACAACTGGCCCTGCGTTCACGTTCCCTTCAGATGTCCCCTACCAAGCTGCCCTTGGAAGTATGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS TCA 72 bp | CTATGTGCTGCAACTGTCCTCACAGCATTGCGGGCCTaGTTGACTGTCATCTGCCCAGACATGTGCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: LCAATVLTALRA*LTVICPDMCSR Trigger: CCTGCTGCACATGTCTGGGCAGATGACAGTCAATCAGGCCCGCAATGCTGTGAGGACAGTTGCAGCACATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | AGATCTTTCGAGCCACAATTAACCACAGTGCTGCCCTaGGCCCTTAATGTGTTTGTGCAGGTGGTCCCGCCG | + |
Preference number: 6 (lower is better) Translates to: RSFEPQLTTVLP*ALNVFVQVVPP Trigger: CGGCGGGACCACCTGCACAAACACATTAAGGGCGCAGGGCAGCACTGTGGTTAATTGTGGCTCGAAAGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | CGGGCGCCACATAGTTGCCAGGGAAAACGCCTATCTTaGTGGTATGCATCGATGTCCCTTTGTACCAGCCGT | + |
Preference number: 6 (lower is better) Translates to: RAPHSCQGKRLS*WYASMSLCTSR Trigger: ACGGCTGGTACAAAGGGACATCGATGCATACCAGCAAGATAGGCGTTTTCCCTGGCAACTATGTGGCGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | TGCAGTGGAAGGGCTGACCATGGTCACCCCGCGACTTaGTTGACCCGCAGTAGACATAGAGACTTTAGCTTG | + |
Preference number: 6 (lower is better) Translates to: CSGRADHGHPAT*LTRSRHRDFSL Trigger: CAAGCTAAAGTCTCTATGTCTACTGCGGGTCAAGCAAGTCGCGGGGTGACCATGGTCAGCCCTTCCACTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | AGTGGAAGGGCTGACCATGGTCACCCCGCGACTTGCTaGACCCGCAGTAGACATAGAGACTTTAGCTTGGGA | + |
Preference number: 6 (lower is better) Translates to: SGRADHGHPATC*TRSRHRDFSLG Trigger: TCCCAAGCTAAAGTCTCTATGTCTACTGCGGGTCAAGCAAGTCGCGGGGTGACCATGGTCAGCCCTTCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | CCCACAATCCCCAGCAAACAGCGTTTGCAAAAGGTATaGTGGCAGGGTAAGACCTTTGCGGAAGCATCCAGG | + |
Preference number: 6 (lower is better) Translates to: PTIPSKQRLQKV*WQGKTFAEASR Trigger: CCTGGATGCTTCCGCAAAGGTCTTACCCTGCCAGCATACCTTTTGCAAACGCTGTTTGCTGGGGATTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | GCGCCACATAGTTGCCAGGGAAAACGCCTATCTTGCTaGTATGCATCGATGTCCCTTTGTACCAGCCGTCCT | + |
Preference number: 6 (lower is better) Translates to: APHSCQGKRLSC*YASMSLCTSRP Trigger: AGGACGGCTGGTACAAAGGGACATCGATGCATACCAGCAAGATAGGCGTTTTCCCTGGCAACTATGTGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | AGCGTTTGCAAAAGGTATGCTGGCAGGGTAAGACCTTaGCGGAAGCATCCAGGCGTTCTAGACACACAGGGC | + |
Preference number: 6 (lower is better) Translates to: SVCKRYAGRVRP*RKHPGVLDTQG Trigger: GCCCTGTGTGTCTAGAACGCCTGGATGCTTCCGCAAAGGTCTTACCCTGCCAGCATACCTTTTGCAAACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | ATCCACTCTGCGGATCACGGTCAGTACGTCGTCCTTTaGGAAGGGAAGGCAATCTTTGTCAGCTTCCTTGTC | + |
Preference number: 6 (lower is better) Translates to: IHSADHGQYVVL*EGKAIFVSFLV Trigger: GACAAGGAAGCTGACAAAGATTGCCTTCCCTTCGCAAAGGACGACGTACTGACCGTGATCCGCAGAGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | ACAATCCCCAGCAAACAGCGTTTGCAAAAGGTATGCTaGCAGGGTAAGACCTTTGCGGAAGCATCCAGGCGT | + |
Preference number: 6 (lower is better) Translates to: TIPSKQRLQKVC*QGKTFAEASRR Trigger: ACGCCTGGATGCTTCCGCAAAGGTCTTACCCTGCCAGCATACCTTTTGCAAACGCTGTTTGCTGGGGATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | TCATTCCGGGAACCCACAATCCCCAGCAAACAGCGTTaGCAAAAGGTATGCTGGCAGGGTAAGACCTTTGCG | + |
Preference number: 6 (lower is better) Translates to: SFREPTIPSKQR*QKVCWQGKTFA Trigger: CGCAAAGGTCTTACCCTGCCAGCATACCTTTTGCAAACGCTGTTTGCTGGGGATTGTGGGTTCCCGGAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | CATCCACTCTGCGGATCACGGTCAGTACGTCGTCCTTaGCGAAGGGAAGGCAATCTTTGTCAGCTTCCTTGT | + |
Preference number: 6 (lower is better) Translates to: HPLCGSRSVRRP*RREGNLCQLPC Trigger: ACAAGGAAGCTGACAAAGATTGCCTTCCCTTCGCAAAGGACGACGTACTGACCGTGATCCGCAGAGTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 90 bp | CATCTGAGTTCATTCCGGGAACCCACAATCCCCAGCAAACAGCGTTaGCAAAAGGTATGCTGGCAGGGTAAGACCTTTGCGGAAGCATCC | + |
Preference number: 6 (lower is better) Translates to: HLSSFREPTIPSKQR*QKVCWQGKTFAEAS Trigger: GGATGCTTCCGCAAAGGTCTTACCCTGCCAGCATACCTTTTGCAAACGCTGTTTGCTGGGGATTGTGGGTTCCCGGAATGAACTCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 90 bp | TTGCCAGGGAAAACGCCTATCTTGCTGGTATGCATCGATGTCCCTTaGTACCAGCCGTCCTGGCAACGCTCAAACACCAAAAACATCTCC | + |
Preference number: 6 (lower is better) Translates to: LPGKTPILLVCIDVP*YQPSWQRSNTKNIS Trigger: GGAGATGTTTTTGGTGTTTGAGCGTTGCCAGGACGGCTGGTACAAAGGGACATCGATGCATACCAGCAAGATAGGCGTTTTCCCTGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | CTGGTATGCATCGATGTCCCTTTGTACCAGCCGTCCTaGCAACGCTCAAACACCAAAAACATCTCCCCTTTC | + |
Preference number: 6 (lower is better) Translates to: LVCIDVPLYQPS*QRSNTKNISPF Trigger: GAAAGGGGAGATGTTTTTGGTGTTTGAGCGTTGCCAGGACGGCTGGTACAAAGGGACATCGATGCATACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS GCA 72 bp | ACTCCTGGCACGGGAGGCTTATCCCACTCTATCAGCTaGTTGGCAGCTGAGTTAAACTCCACGTATGAAATT | + |
Preference number: 6 (lower is better) Translates to: TPGTGGLSHSIS*LAAELNSTYEI Trigger: AATTTCATACGTGGAGTTTAACTCAGCTGCCAAGCAGCTGATAGAGTGGGATAAGCCTCCCGTGCCAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CCA 72 bp | CTCCGGGCTCTTTTCCTTCGTAGTTATATAATGCTTTaGCACACGGTAACTGAGGTATTCCCCTCACTGGGG | + |
Preference number: 6 (lower is better) Translates to: LRALFLRSYIML*HTVTEVFPSLG Trigger: CCCCAGTGAGGGGAATACCTCAGTTACCGTGTGCCAAAGCATTATATAACTACGAAGGAAAAGAGCCCGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS CAA 72 bp | AAAACGCCTATCTTGCTGGTATGCATCGATGTCCCTTaGTACCAGCCGTCCTGGCAACGCTCAAACACCAAA | + |
Preference number: 6 (lower is better) Translates to: KTPILLVCIDVP*YQPSWQRSNTK Trigger: TTTGGTGTTTGAGCGTTGCCAGGACGGCTGGTACAAAGGGACATCGATGCATACCAGCAAGATAGGCGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |
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CDS TCA 72 bp | TACGGATATATAGCAACATATACACTGGGACGAGTCTaGGGCCGTAAATGTGCAATCTGTTCAGAGGACCCC | + |
Preference number: 6 (lower is better) Translates to: YGYIATYTLGRV*GRKCAICSEDP Trigger: GGGGTCCTCTGAACAGATTGCACATTTACGGCCTCAGACTCGTCCCAGTGTATATGTTGCTATATATCCGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034060.7 ENSMUST00000209611.2 |