RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH3PXD2A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053617

Ensembl transcript IDs: ENSMUST00000081619.10, ENSMUST00000111800.4, ENSMUST00000237796.2

Found 556 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGAGACTCGCATCCTCTCGGCCAACTCCCACACTGTCCTCCACGTaGCCCGAGGAGGGCAACTCTCCTTGCCAGGCCAAGCCAGCACAG +
Preference number: 1 (lower is better)
Translates to: RRLASSRPTPTLSST*PEEGNSPCQAKPAQ
Trigger: CTGTGCTGGCTTGGCCTGGCAAGGAGAGTTGCCCTCCTCGGGGCACGTGGAGGACAGTGTGGGAGTTGGCCGAGAGGATGCGAGTCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp GGGAAGGCTGGCTCTGGGGATCCTGGTGGTCCAGTCCAACTGAGATaGTCTGTGCCTGGCAGCCAGGCGGGCGCACTAATGGAGCTGGCT +
Preference number: 1 (lower is better)
Translates to: GKAGSGDPGGPVQLR*SVPGSQAGALMELA
Trigger: AGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCCAGGCACAGAGCATCTCAGTTGGACTGGACCACCAGGATCCCCAGAGCCAGCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp CGGAAGGCTCGCTGTGGAGACGGGAGGCACTGCTGTGTGGACAGCTaGAGGCCCTACTGTCTCACTCCTCATCTGCCAGCCTGCCTGTCC +
Preference number: 1 (lower is better)
Translates to: RKARCGDGRHCCVDS*RPYCLTPHLPACLS
Trigger: GGACAGGCAGGCTGGCAGATGAGGAGTGAGACAGTAGGGCCTGCAGCTGTCCACACAGCAGTGCCTCCCGTCTCCACAGCGAGCCTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp CTGCCTGGGAGGTGGGGTGAGGGGCGCTCTTCCTCCCATGTCTGTTaGAACCAGCAGCCCTTGGTCAGAGGAGATGCTGGCAGCTCAGCC +
Preference number: 1 (lower is better)
Translates to: LPGRWGEGRSSSHVC*NQQPLVRGDAGSSA
Trigger: GGCTGAGCTGCCAGCATCTCCTCTGACCAAGGGCTGCTGGTTCCAACAGACATGGGAGGAAGAGCGCCCCTCACCCCACCTCCCAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 90 bp TGGGTACCTTGCCAGCAGGCTAAGGGCACAGTGTCTGCTCTGGGCTaGCCCAGCCAGGGTCCCTTCTGCCCAGGTTGGAGAAAGTGGGCA +
Preference number: 1 (lower is better)
Translates to: WVPCQQAKGTVSALG*PSQGPFCPGWRKWA
Trigger: TGCCCACTTTCTCCAACCTGGGCAGAAGGGACCCTGGCTGGGTCAGCCCAGAGCAGACACTGTGCCCTTAGCCTGCTGGCAAGGTACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 90 bp AGGTTAGGGTTGGGAGCTGAAGGCAGACCTGCCTGGGAGGTGGGGTaGGGGGCGCTCTTCCTCCCATGTCTGTTGGAACCAGCAGCCCTT +
Preference number: 1 (lower is better)
Translates to: RLGLGAEGRPAWEVG*GALFLPCLLEPAAL
Trigger: AAGGGCTGCTGGTTCCAACAGACATGGGAGGAAGAGCGCCCCTCACCCCACCTCCCAGGCAGGTCTGCCTTCAGCTCCCAACCCTAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp TGTGGAGACGGAAGGCTCGCTGTGGAGACGGGAGGCACTGCTGTGTaGACAGCTGCAGGCCCTACTGTCTCACTCCTCATCTGCCAGCCT +
Preference number: 1 (lower is better)
Translates to: CGDGRLAVETGGTAV*TAAGPTVSLLICQP
Trigger: AGGCTGGCAGATGAGGAGTGAGACAGTAGGGCCTGCAGCTGTCCACACAGCAGTGCCTCCCGTCTCCACAGCGAGCCTTCCGTCTCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp CTCTGGGGATCCTGGTGGTCCAGTCCAACTGAGATGCTCTGTGCCTaGCAGCCAGGCGGGCGCACTAATGGAGCTGGCTCAATGCAGACA +
Preference number: 1 (lower is better)
Translates to: LWGSWWSSPTEMLCA*QPGGRTNGAGSMQT
Trigger: TGTCTGCATTGAGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCCAGGCACAGAGCATCTCAGTTGGACTGGACCACCAGGATCCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp AAGCCCTCTCGCCTGGGGAGGGCTAGGATTCAGGGACACATCGCCTaGCATCTCTCGACCATGTCTGGGAAGGCCTGGTATGCACCCTTC +
Preference number: 1 (lower is better)
Translates to: KPSRLGRARIQGHIA*HLSTMSGKAWYAPF
Trigger: GAAGGGTGCATACCAGGCCTTCCCAGACATGGTCGAGAGATGCCAGGCGATGTGTCCCTGAATCCTAGCCCTCCCCAGGCGAGAGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp CTTCTTGGGTACCTTGCCAGCAGGCTAAGGGCACAGTGTCTGCTCTaGGCTGACCCAGCCAGGGTCCCTTCTGCCCAGGTTGGAGAAAGT +
Preference number: 1 (lower is better)
Translates to: LLGYLASRLRAQCLL*ADPARVPSAQVGES
Trigger: ACTTTCTCCAACCTGGGCAGAAGGGACCCTGGCTGGGTCAGCCCAGAGCAGACACTGTGCCCTTAGCCTGCTGGCAAGGTACCCAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp GGGGGAAGGGCTCCTGCTGACCACAGTAGGCTGGCCGGGGATGAGTaGACACTAGGAAATCCCTGTGATTTAGGAGTCCCAGTGACATCC +
Preference number: 1 (lower is better)
Translates to: GGRAPADHSRLAGDE*TLGNPCDLGVPVTS
Trigger: GGATGTCACTGGGACTCCTAAATCACAGGGATTTCCTAGTGTCCACTCATCCCCGGCCAGCCTACTGTGGTCAGCAGGAGCCCTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 90 bp GCAGCCCTTGGTCAGAGGAGATGCTGGCAGCTCAGCCACAGGCTGTaGGACAGGATCTGTCCCAAGTCAAAGGCACGTATGGCATCCACT +
Preference number: 1 (lower is better)
Translates to: AALGQRRCWQLSHRL*DRICPKSKARMAST
Trigger: AGTGGATGCCATACGTGCCTTTGACTTGGGACAGATCCTGTCTCACAGCCTGTGGCTGAGCTGCCAGCATCTCCTCTGACCAAGGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp AGACAGGATCTGTCCCAAGTCAAAGGCACGTATGGCATCCACTCCTaGCATGAGGGGAGTCCTGGAAGGACACTGCGGGCTTCTTTCCGG +
Preference number: 1 (lower is better)
Translates to: RQDLSQVKGTYGIHS*HEGSPGRTLRASFR
Trigger: CCGGAAAGAAGCCCGCAGTGTCCTTCCAGGACTCCCCTCATGCCAGGAGTGGATGCCATACGTGCCTTTGACTTGGGACAGATCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 90 bp TTAGCCACCCAGCAGGCTGCCCTCTTTCCCTCTTGGGCAGGAACCTaGACACTTTGTTTCACCGAGCCGGGGACTTGGCTTTACCCAGTT +
Preference number: 1 (lower is better)
Translates to: LATQQAALFPSWAGT*TLCFTEPGTWLYPV
Trigger: AACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTGCCCAAGAGGGAAAGAGGGCAGCCTGCTGGGTGGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp GCTGCGCGTCCCTTGGGACCTGCCCAATGCCAAGGACTAGTTCAATaGAGACTGCCTGCCCGGTACTCATTCTCTCTAACCCCATGCTAT +
Preference number: 1 (lower is better)
Translates to: AARPLGPAQCQGLVQ*RLPARYSFSLTPCY
Trigger: ATAGCATGGGGTTAGAGAGAATGAGTACCGGGCAGGCAGTCTCCATTGAACTAGTCCTTGGCATTGGGCAGGTCCCAAGGGACGCGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp GACAGGCTAGCTCTGCATGGGACAAAATGCACTGGGCAAAAACTATaGGGAATCCGGGATGGGACTGGGCCCGCAGACCCAAAGATTGGC +
Preference number: 1 (lower is better)
Translates to: DRLALHGTKCTGQKL*GIRDGTGPADPKIG
Trigger: GCCAATCTTTGGGTCTGCGGGCCCAGTCCCATCCCGGATTCCCCATAGTTTTTGCCCAGTGCATTTTGTCCCATGCAGAGCTAGCCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp ACACACATGTTGTCAGAAGCTGCGCGTCCCTTGGGACCTGCCCAATaGCAAGGACTAGTTCAATGGAGACTGCCTGCCCGGTACTCATTC +
Preference number: 1 (lower is better)
Translates to: THMLSEAARPLGPAQ*QGLVQWRLPARYSF
Trigger: GAATGAGTACCGGGCAGGCAGTCTCCATTGAACTAGTCCTTGGCATTGGGCAGGTCCCAAGGGACGCGCAGCTTCTGACAACATGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp GTGAATGACACACATGTTGTCAGAAGCTGCGCGTCCCTTGGGACCTaGCCAATGCCAAGGACTAGTTCAATGGAGACTGCCTGCCCGGTA +
Preference number: 1 (lower is better)
Translates to: VNDTHVVRSCASLGT*PMPRTSSMETACPV
Trigger: TACCGGGCAGGCAGTCTCCATTGAACTAGTCCTTGGCATTGGGCAGGTCCCAAGGGACGCGCAGCTTCTGACAACATGTGTGTCATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp CCACCGGCTCGTTCTCATCACACGGTAGCAGTAGCTGCTCACTTCTaGCTTCCAAGTTACCTTCCAGGCCTCTCAGTAACTGGTAGGGAC +
Preference number: 1 (lower is better)
Translates to: PPARSHHTVAVAAHF*LPSYLPGLSVTGRD
Trigger: GTCCCTACCAGTTACTGAGAGGCCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGAGAACGAGCCGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp AGCAGGCCTACAGTACTATATAAACGGGACATACCAGCAAGGCCGTaGTTGCTATCCTTGGGGAGCCGAGTTCTGGAACTTGCTCCTCGC +
Preference number: 1 (lower is better)
Translates to: SRPTVLYKRDIPARP*LLSLGSRVLELAPR
Trigger: GCGAGGAGCAAGTTCCAGAACTCGGCTCCCCAAGGATAGCAAGCACGGCCTTGCTGGTATGTCCCGTTTATATAGTACTGTAGGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp CCAGTGACATCCACCGGCTCGTTCTCATCACACGGTAGCAGTAGCTaGTCACTTCTGCCTTCCAAGTTACCTTCCAGGCCTCTCAGTAAC +
Preference number: 1 (lower is better)
Translates to: PVTSTGSFSSHGSSS*SLLPSKLPSRPLSN
Trigger: GTTACTGAGAGGCCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGAGAACGAGCCGGTGGATGTCACTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp CAGGGACACATCGCCTGGCATCTCTCGACCATGTCTGGGAAGGCCTaGTATGCACCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGG +
Preference number: 1 (lower is better)
Translates to: QGHIAWHLSTMSGKA*YAPFLFQVFFVLAG
Trigger: CCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGGTGCATACCAGGCCTTCCCAGACATGGTCGAGAGATGCCAGGCGATGTGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp ACTCTCTCTCTCTCAGCCTTCCCACACCTACCTAAAAGACATCTCTaGAAGCTTCCACCCCGTGCAAGGACGGTAAGCGCCAGTAACTCC +
Preference number: 1 (lower is better)
Translates to: TLSLSAFPHLPKRHL*KLPPRARTVSASNS
Trigger: GGAGTTACTGGCGCTTACCGTCCTTGCACGGGGTGGAAGCTTCCAGAGATGTCTTTTAGGTAGGTGTGGGAAGGCTGAGAGAGAGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp TTGGAGAAAGTGGGCAGAAGTAGGCAGATTAGCCACCCAGCAGGCTaGCCTCTTTCCCTCTTGGGCAGGAACCTGAACACTTTGTTTCAC +
Preference number: 1 (lower is better)
Translates to: LEKVGRSRQISHPAG*PLSLLGRNLNTLFH
Trigger: GTGAAACAAAGTGTTCAGGTTCCTGCCCAAGAGGGAAAGAGGGCAGCCTGCTGGGTGGCTAATCTGCCTACTTCTGCCCACTTTCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp TGGTTTTCCTCTAGGTGGGTCAGAGCCCCAGGCCCTTCCCTCAGCTaGTGTGGTCTGTCCAATATCACAAAGCAGCTCATTAGCTCTAAG +
Preference number: 1 (lower is better)
Translates to: WFSSRWVRAPGPSLS*CGLSNITKQLISSK
Trigger: CTTAGAGCTAATGAGCTGCTTTGTGATATTGGACAGACCACAGCAGCTGAGGGAAGGGCCTGGGGCTCTGACCCACCTAGAGGAAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp CTCTCCAGCCAGAATCGTGTGAATGACACACATGTTGTCAGAAGCTaGGCGTCCCTTGGGACCTGCCCAATGCCAAGGACTAGTTCAATG +
Preference number: 1 (lower is better)
Translates to: LSSQNRVNDTHVVRS*ASLGTCPMPRTSSM
Trigger: CATTGAACTAGTCCTTGGCATTGGGCAGGTCCCAAGGGACGCGCAGCTTCTGACAACATGTGTGTCATTCACACGATTCTGGCTGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp CACTTGAGATTTAGAGAGGGGAGAGGGTGGCACCTGCCAATCCCTTaGAGCCAGGTTGGGATCAAGGCTTTGGAAAGACCCTTTCCTTCA +
Preference number: 1 (lower is better)
Translates to: HLRFREGRGWHLPIP*SQVGIKALERPFPS
Trigger: TGAAGGAAAGGGTCTTTCCAAAGCCTTGATCCCAACCTGGCTGCAAGGGATTGGCAGGTGCCACCCTCTCCCCTCTCTAAATCTCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp AAGGATGGCAACTGTGTACCCTTTGAAGTAAACTCAGAAGCAGTGTaGCTCAGTAGATGCACATGCAGGAGGGTGGTGCACTCGCCTGGC +
Preference number: 1 (lower is better)
Translates to: KDGNCVPFEVNSEAV*LSRCTCRRVVHSPG
Trigger: GCCAGGCGAGTGCACCACCCTCCTGCATGTGCATCTACTGAGGCACACTGCTTCTGAGTTTACTTCAAAGGGTACACAGTTGCCATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp ATATCACAAAGCAGCTCATTAGCTCTAAGGAAAAGCCCTCTCGCCTaGGGAGGGCTAGGATTCAGGGACACATCGCCTGGCATCTCTCGA +
Preference number: 1 (lower is better)
Translates to: ISQSSSLALRKSPLA*GGLGFRDTSPGISR
Trigger: TCGAGAGATGCCAGGCGATGTGTCCCTGAATCCTAGCCCTCCCCAGGCGAGAGGGCTTTTCCTTAGAGCTAATGAGCTGCTTTGTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp GAGCCGGGGACTTGGCTTTACCCAGTTCCAAACTCCCTGCTAAGGTaGCATGCTTGGGCACTGTGTACACAGTGGAAACCTAAACAAACA +
Preference number: 1 (lower is better)
Translates to: EPGTWLYPVPNSLLR*HAWALCTQWKPKQT
Trigger: TGTTTGTTTAGGTTTCCACTGTGTACACAGTGCCCAAGCATGGCACCTTAGCAGGGAGTTTGGAACTGGGTAAAGCCAAGTCCCCGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp CTTGGGACCTGCCCAATGCCAAGGACTAGTTCAATGGAGACTGCCTaGCCGGTACTCATTCTCTCTAACCCCATGCTATTCAAGTGGAGA +
Preference number: 1 (lower is better)
Translates to: LGTCPMPRTSSMETA*PVLILSNPMLFKWR
Trigger: TCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTACCGGGCAGGCAGTCTCCATTGAACTAGTCCTTGGCATTGGGCAGGTCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 90 bp ATCAGATTGCCCCAAACGGGACTTATCAAAAATCCCAGCCGGTCATaGGGAGCCTTCCACACTCACAGGAAGCGATCTAAGGTTCGCTGT +
Preference number: 1 (lower is better)
Translates to: IRLPQTGLIKNPSRS*GAFHTHRKRSKVRC
Trigger: ACAGCGAACCTTAGATCGCTTCCTGTGAGTGTGGAAGGCTCCTCATGACCGGCTGGGATTTTTGATAAGTCCCGTTTGGGGCAATCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp ATGCACCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTaGTGTGCCCTGATGGGTTTGGTGGTGAGGGACCTTGGCTATGAC +
Preference number: 1 (lower is better)
Translates to: MHPSCFKYSLCWQGL*CALMGLVVRDLGYD
Trigger: GTCATAGCCAAGGTCCCTCACCACCAAACCCATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGGTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp ACACATCGCCTGGCATCTCTCGACCATGTCTGGGAAGGCCTGGTATaGACCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGT +
Preference number: 1 (lower is better)
Translates to: THRLASLDHVWEGLV*TLLVSSILCAGRVC
Trigger: ACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGGTGCATACCAGGCCTTCCCAGACATGGTCGAGAGATGCCAGGCGATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp AGCACTTCCATACTCAACAGTATCTTTTCCATGTCTTCATCTTGGTaGCCGGGACAATGGCCTGCCTGGGCTGCTTCTGTTCGCTCTGTT +
Preference number: 1 (lower is better)
Translates to: STSILNSIFSMSSSW*PGQWPAWAASVRSV
Trigger: AACAGAGCGAACAGAAGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGATACTGTTGAGTATGGAAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp GAAACAAACCGTAACCCAGTAGCTCATGAATCCCCGGGGGTCTCATaGCAAGGAGAGGATGGAGGTGGGTGCCCTAATTTAATCACTTCA +
Preference number: 1 (lower is better)
Translates to: ETNRNPVAHESPGVS*QGEDGGGCPNLITS
Trigger: TGAAGTGATTAAATTAGGGCACCCACCTCCATCCTCTCCTTGGCATGAGACCCCCGGGGATTCATGAGCTACTGGGTTACGGTTTGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp CTCAGCACCGAGCTTAGGAAACATGGGGACATGAGACTATCAGATTaGCCCAAACGGGACTTATCAAAAATCCCAGCCGGTCATGAGGAG +
Preference number: 1 (lower is better)
Translates to: LSTELRKHGDMRLSD*PKRDLSKIPAGHEE
Trigger: CTCCTCATGACCGGCTGGGATTTTTGATAAGTCCCGTTTGGGGCAATCTGATAGTCTCATGTCCCCATGTTTCCTAAGCTCGGTGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp CTCAACAGTATCTTTTCCATGTCTTCATCTTGGTGCCCGGGACAATaGCCTGCCTGGGCTGCTTCTGTTCGCTCTGTTAATACCAGTGTG +
Preference number: 1 (lower is better)
Translates to: LNSIFSMSSSWCPGQ*PAWAASVRSVNTSV
Trigger: CACACTGGTATTAACAGAGCGAACAGAAGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGATACTGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp TTCAGCACTTCCATACTCAACAGTATCTTTTCCATGTCTTCATCTTaGTGCCCGGGACAATGGCCTGCCTGGGCTGCTTCTGTTCGCTCT +
Preference number: 1 (lower is better)
Translates to: FSTSILNSIFSMSSS*CPGQWPAWAASVRS
Trigger: AGAGCGAACAGAAGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGATACTGTTGAGTATGGAAGTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp GGTGGCACCTGCCAATCCCTTGCAGCCAGGTTGGGATCAAGGCTTTaGAAAGACCCTTTCCTTCAATCTACAAGCACCAATGTACCTACT +
Preference number: 1 (lower is better)
Translates to: GGTCQSLAARLGSRL*KDPFLQSTSTNVPT
Trigger: AGTAGGTACATTGGTGCTTGTAGATTGAAGGAAAGGGTCTTTCCAAAGCCTTGATCCCAACCTGGCTGCAAGGGATTGGCAGGTGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp GAAGCCATCTTTTCCTGCCTCTTTTCCTTGCTGCATGAGAAAGGATaGTCGTGTGCACCTGCCTCAGGAGTTCCTGTTATTAGAGACAGG +
Preference number: 1 (lower is better)
Translates to: EAIFSCLFSLLHEKG*SCAPASGVPVIRDR
Trigger: CCTGTCTCTAATAACAGGAACTCCTGAGGCAGGTGCACACGAGCATCCTTTCTCATGCAGCAAGGAAAAGAGGCAGGAAAAGATGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp CATGAATCCCCGGGGGTCTCATGCCAAGGAGAGGATGGAGGTGGGTaGCCTAATTTAATCACTTCAGCACTTCCATACTCAACAGTATCT +
Preference number: 1 (lower is better)
Translates to: HESPGVSCQGEDGGG*PNLITSALPYSTVS
Trigger: AGATACTGTTGAGTATGGAAGTGCTGAAGTGATTAAATTAGGGCACCCACCTCCATCCTCTCCTTGGCATGAGACCCCCGGGGATTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp AGGGGCCCGGTCCCTCTTCCTATCTGTATAGAAATTCACACAAGATaGGTCAGAGCAGCAGGCCTACAGTACTATATAAACGGGACATAC +
Preference number: 1 (lower is better)
Translates to: RGPVPLPICIEIHTR*VRAAGLQYYINGTY
Trigger: GTATGTCCCGTTTATATAGTACTGTAGGCCTGCTGCTCTGACCCATCTTGTGTGAATTTCTATACAGATAGGAAGAGGGACCGGGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp GTCCCTACGGTGTGGCCTATTATGGTCAGTGGTGTCTATTTTGTATaGTTTGACAGGCTAGCTCTGCATGGGACAAAATGCACTGGGCAA +
Preference number: 1 (lower is better)
Translates to: VPTVWPIMVSGVYFV*FDRLALHGTKCTGQ
Trigger: TTGCCCAGTGCATTTTGTCCCATGCAGAGCTAGCCTGTCAAACCATACAAAATAGACACCACTGACCATAATAGGCCACACCGTAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 90 bp CCCACTAGCTTTCCCACATGCCAGACACGTCTGTTTGCACTAACATaGCTCTCTCACACTTCCAAAGACACAGCCAACTGTCCAGAATAT +
Preference number: 1 (lower is better)
Translates to: PTSFPTCQTRLFALT*LSHTSKDTANCPEY
Trigger: ATATTCTGGACAGTTGGCTGTGTCTTTGGAAGTGTGAGAGAGTCATGTTAGTGCAAACAGACGTGTCTGGCATGTGGGAAAGCTAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp TACAGCACGCACCCTCCAGATGAGTTTGCTTATGGCCAGGATTCCTaGCCACAAGCTGAACTGAGGTTTTACAGTTTTAGAAAGACTCAA +
Preference number: 1 (lower is better)
Translates to: YSTHPPDEFAYGQDS*PQAELRFYSFRKTQ
Trigger: TTGAGTCTTTCTAAAACTGTAAAACCTCAGTTCAGCTTGTGGGCAGGAATCCTGGCCATAAGCAAACTCATCTGGAGGGTGCGTGCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp GTTCAATGGAGACTGCCTGCCCGGTACTCATTCTCTCTAACCCCATaGTATTCAAGTGGAGAATTACCACCAGTCTCTTTCTTCTTACAC +
Preference number: 1 (lower is better)
Translates to: VQWRLPARYSFSLTP*YSSGELPPVSFFLH
Trigger: GTGTAAGAAGAAAGAGACTGGTGGTAATTCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTACCGGGCAGGCAGTCTCCATTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 90 bp ACTGCCTGCCCGGTACTCATTCTCTCTAACCCCATGCTATTCAAGTaGAGAATTACCACCAGTCTCTTTCTTCTTACACACACATATGCA +
Preference number: 1 (lower is better)
Translates to: TACPVLILSNPMLFK*RITTSLFLLTHTYA
Trigger: TGCATATGTGTGTGTAAGAAGAAAGAGACTGGTGGTAATTCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTACCGGGCAGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 90 bp CAGATGAGTTTGCTTATGGCCAGGATTCCTGCCCACAAGCTGAACTaGGGTTTTACAGTTTTAGAAAGACTCAAGCACACATCCAAAGCT +
Preference number: 1 (lower is better)
Translates to: QMSLLMARIPAHKLN*GFTVLERLKHTSKA
Trigger: AGCTTTGGATGTGTGCTTGAGTCTTTCTAAAACTGTAAAACCTCAGTTCAGCTTGTGGGCAGGAATCCTGGCCATAAGCAAACTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp GCGAAGGGTATAAATGCCAGTAAAATACTCTCTAACATCTCAAAGTaGCTACGAGGGCGCTATATAATGCCTTCGTCCATTAGGAGTGAG +
Preference number: 1 (lower is better)
Translates to: AKGINASKILSNISK*LRGRYIMPSSIRSE
Trigger: CTCACTCCTAATGGACGAAGGCATTATATAGCGCCCTCGTAGGCACTTTGAGATGTTAGAGAGTATTTTACTGGCATTTATACCCTTCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 90 bp CAAGTGGAGAATTACCACCAGTCTCTTTCTTCTTACACACACATATaGACTCATGAACTTCCCATGCTCGTGGAAATGACCACACACACA +
Preference number: 1 (lower is better)
Translates to: QVENYHQSLSSYTHI*THELPMLVEMTTHT
Trigger: TGTGTGTGTGGTCATTTCCACGAGCATGGGAAGTTCATGAGTGCATATGTGTGTGTAAGAAGAAAGAGACTGGTGGTAATTCTCCACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 90 bp AGTGTCTGCTCTGGGCTGACCCAGCCAGGGTCCCTTCTGCCCAGGTaGGAGAAAGTGGGCAGAAGTAGGCAGATTAGCCACCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: SVCSGLTQPGSLLPR*EKVGRSRQISHPAG
Trigger: GCCTGCTGGGTGGCTAATCTGCCTACTTCTGCCCACTTTCTCCAACCTGGGCAGAAGGGACCCTGGCTGGGTCAGCCCAGAGCAGACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 90 bp GGTGAGGGGCGCTCTTCCTCCCATGTCTGTTGGAACCAGCAGCCCTaGGTCAGAGGAGATGCTGGCAGCTCAGCCACAGGCTGTGAGACA +
Preference number: 2 (lower is better)
Translates to: GEGRSSSHVCWNQQP*VRGDAGSSATGCET
Trigger: TGTCTCACAGCCTGTGGCTGAGCTGCCAGCATCTCCTCTGACCAAGGGCTGCTGGTTCCAACAGACATGGGAGGAAGAGCGCCCCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR TCA 90 bp TGTCACCACCACGGGCTTTTGACAGAGGAGGCTAGTGGGTTGCATCCACCTGTGGGCCCCAGAAAGGGCTaGGCTCTTTGGAGACGCTGC +
Preference number: 2 (lower is better)
Translates to: CHHHGLLTEEASGLHPPVGPRKG*ALWRRC
Trigger: GCAGCGTCTCCAAAGAGCTCAGCCCTTTCTGGGGCC...CACAGGTGGATGCAACCCACTAGCCTCCTCTGTCAAAAGCCCGTGGTGGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CCA 90 bp TGTCACCACCACGGGCTTTTGACAGAGGAGGCTAGTGGGTTGCATCCACCTGTGGCACAGTGTCTGCTCTaGGCTGACCCAGCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: CHHHGLLTEEASGLHPPVAQCLL*ADPARV
Trigger: GACCCTGGCTGGGTCAGCCCAGAGCAGACACTGTGC...CACAGGTGGATGCAACCCACTAGCCTCCTCTGTCAAAAGCCCGTGGTGGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR GCA 90 bp TGTCACCACCACGGGCTTTTGACAGAGGAGGCTAGTGGGTTGCATCCACCTGTGGAGGGCAACTCTCCTTaGCAGGCCAAGCCAGCACAG +
Preference number: 2 (lower is better)
Translates to: CHHHGLLTEEASGLHPPVEGNSP*QAKPAQ
Trigger: CTGTGCTGGCTTGGCCTGGCAAGGAGAGTTGCCCTC...CACAGGTGGATGCAACCCACTAGCCTCCTCTGTCAAAAGCCCGTGGTGGTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CCA 90 bp CAACGTGCAATGCGGGGATCCCGGGCCCAGGGCATTCCTGCTCTTCCCTTTCTCAGCTGGAGGGTGTATTaGGGGGTCACATGTTCTGCA +
Preference number: 2 (lower is better)
Translates to: QRAMRGSRAQGIPALPFLSWRVY*GVTCSA
Trigger: TGCAGAACATGTGACCCCCCAATACACCCTCCAGCT...GAGAAAGGGAAGAGCAGGAATGCCCTGGGCCCGGGATCCCCGCATTGCACGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR TCA 90 bp CCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTGCTGTGCCCTGATGCCTGGGAGGTGGGGTaGGGGGCGCTCTTCCTCCCA +
Preference number: 2 (lower is better)
Translates to: PFLFQVFFVLAGFVLCPDAWEVG*GALFLP
Trigger: TGGGAGGAAGAGCGCCCCTCACCCCACCTCCCAGGC...ATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR TCA 90 bp TCAAGCACACATCCAAAGCTTCATAGCCCACACACATCAGGAGGCTGGGGCGAGGTTAGGGTTGGGAGCTaGAGGCAGACCTGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: SSTHPKLHSPHTSGGWGEVRVGS*RQTCLG
Trigger: TCCCAGGCAGGTCTGCCTTCAGCTCCCAACCCTAAC...CTCGCCCCAGCCTCCTGATGTGTGTGGGCTATGAAGCTTTGGATGTGTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 90 bp CCAGCAGGCTGCCCTCTTTCCCTCTTGGGCAGGAACCTGAACACTTaGTTTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCCAAACTC +
Preference number: 2 (lower is better)
Translates to: PAGCPLSLLGRNLNT*FHRAGDLALPSSKL
Trigger: GAGTTTGGAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTGCCCAAGAGGGAAAGAGGGCAGCCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 90 bp AGAAGTAGGCAGATTAGCCACCCAGCAGGCTGCCCTCTTTCCCTCTaGGGCAGGAACCTGAACACTTTGTTTCACCGAGCCGGGGACTTG +
Preference number: 2 (lower is better)
Translates to: RSRQISHPAGCPLSL*GRNLNTLFHRAGDL
Trigger: CAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTGCCCAAGAGGGAAAGAGGGCAGCCTGCTGGGTGGCTAATCTGCCTACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR GCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGAGCCACCCAGCAGGCTaGCCTCTTTCCCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRSHPAG*PLSLLG
Trigger: GCCCAAGAGGGAAAGAGGGCAGCCTGCTGGGTGGCT...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR GCA 90 bp ATCTTTTCCATGTCTTCATCTTGGTGCCCGGGACAATGGCCTGCCTGGGCTGCTCCAGTCCAACTGAGATaGTCTGTGCCTGGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: IFSMSSSWCPGQWPAWAAPVQLR*SVPGSQ
Trigger: CTGGCTGCCAGGCACAGAGCATCTCAGTTGGACTGG...AGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGAGCCAGCCACTGAAGTaGCTGAGCAGGGCAGGACCC +
Preference number: 2 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRSQPLK*LSRAGP
Trigger: GGGTCCTGCCCTGCTCAGCCACTTCAGTGGCTGGCT...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR TCA 90 bp TGGCAGCCAGGCGGGCGCACTAATGGAGCTGGCTCAATGCAGACATCTGAGGAGATGGCCTGTGCTAAATaGCATATGGTCCATCCGCAT +
Preference number: 2 (lower is better)
Translates to: WQPGGRTNGAGSMQTSEEMACAK*HMVHPH
Trigger: ATGCGGATGGACCATATGTCATTTAGCACAGGCCAT...CTCCTCAGATGTCTGCATTGAGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR TCA 90 bp CTTCCAAGTTACCTTCCAGGCCTCTCAGTAACTGGTAGGGACACCCATGTCCTCACAGGAACCTGCTGCTaGTGGACACCCCACTACCAG +
Preference number: 2 (lower is better)
Translates to: LPSYLPGLSVTGRDTHVLTGTCC*WTPHYQ
Trigger: CTGGTAGTGGGGTGTCCATCAGCAGCAGGTTCCTGT...GAGGACATGGGTGTCCCTACCAGTTACTGAGAGGCCTGGAAGGTAACTTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR GCA 90 bp TTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCCAAACTCCCTGCTAAGGTGCTCTCCTAAGTGTGCATaGCCATCACACCCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: FTEPGTWLYPVPNSLLRCSPKCA*PSHPPF
Trigger: GAAGGGAGGGTGTGATGGGCATGCACACTTAGGAGA...GCACCTTAGCAGGGAGTTTGGAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR GCA 90 bp AAAGGGCTGAGCTCTTTGGAGACGCTGCCAAAGCCCAGAGCTGGTAGTTCTCCAGGCCCAGGGCATTCCTaGTCTTCCCTTTCTCCTAAG +
Preference number: 2 (lower is better)
Translates to: KGLSSLETLPKPRAGSSPGPGHS*SSLSPK
Trigger: CTTAGGAGAAAGGGAAGAGCAGGAATGCCCTGGGCC...TGGAGAACTACCAGCTCTGGGCTTTGGCAGCGTCTCCAAAGAGCTCAGCCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR GCA 90 bp TCAAGCACACATCCAAAGCTTCATAGCCCACACACATCAGGAGGCTGGGGCGAGTGCTGGCAGGGTTTGTaGTGTGCCCTGATGGGTTTG +
Preference number: 2 (lower is better)
Translates to: SSTHPKLHSPHTSGGWGECWQGL*CALMGL
Trigger: CAAACCCATCAGGGCACAGCACAAACCCTGCCAGCA...CTCGCCCCAGCCTCCTGATGTGTGTGGGCTATGAAGCTTTGGATGTGTGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 90 bp CTCTTGGGCAGGAACCTGAACACTTTGTTTCACCGAGCCGGGGACTaGGCTTTACCCAGTTCCAAACTCCCTGCTAAGGTGCCATGCTTG +
Preference number: 2 (lower is better)
Translates to: LLGRNLNTLFHRAGD*ALPSSKLPAKVPCL
Trigger: CAAGCATGGCACCTTAGCAGGGAGTTTGGAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTGCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CCA 90 bp TCAAGCACACATCCAAAGCTTCATAGCCCACACACATCAGGAGGCTGGGGCGAGAGTCCTCCATCTTCTTaGGTACCTTGCCAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: SSTHPKLHSPHTSGGWGESPPSS*VPCQQA
Trigger: AGCCTGCTGGCAAGGTACCCAAGAAGATGGAGGACT...CTCGCCCCAGCCTCCTGATGTGTGTGGGCTATGAAGCTTTGGATGTGTGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGGGACAATGGCCTGCCTaGGCTGCTTCTGTTCGCTCT +
Preference number: 2 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRGQWPA*AASVRS
Trigger: AGAGCGAACAGAAGCAGCCCAGGCAGGCCATTGTCC...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 90 bp TTAGAGAGGGGAGAGGGTGGCACCTGCCAATCCCTTGCAGCCAGGTaGGGATCAAGGCTTTGGAAAGACCCTTTCCTTCAATCTACAAGC +
Preference number: 2 (lower is better)
Translates to: LERGEGGTCQSLAAR*GSRLWKDPFLQSTS
Trigger: GCTTGTAGATTGAAGGAAAGGGTCTTTCCAAAGCCTTGATCCCAACCTGGCTGCAAGGGATTGGCAGGTGCCACCCTCTCCCCTCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR TCA 90 bp ATCTTTTCCATGTCTTCATCTTGGTGCCCGGGACAATGGCCTGCCTGGGCTGCTGCAAAGGATACGGTTTaGAGACTTTTCCCTCCACCC +
Preference number: 2 (lower is better)
Translates to: IFSMSSSWCPGQWPAWAAAKDTV*RLFPPP
Trigger: GGGTGGAGGGAAAAGTCTTCAAACCGTATCCTTTGC...AGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR GCA 90 bp CCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTGCTGTGCCCTGATGTCCTGGAAGGACACTaGGGGCTTCTTTCCGGAGGG +
Preference number: 2 (lower is better)
Translates to: PFLFQVFFVLAGFVLCPDVLEGH*GLLSGG
Trigger: CCCTCCGGAAAGAAGCCCGCAGTGTCCTTCCAGGAC...ATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CCA 90 bp ATCTTTTCCATGTCTTCATCTTGGTGCCCGGGACAATGGCCTGCCTGGGCTGCTGATAGGGTTGGCTCCTaGCTTCAAAGTCCTCCATCT +
Preference number: 2 (lower is better)
Translates to: IFSMSSSWCPGQWPAWAADRVGS*LQSPPS
Trigger: AGATGGAGGACTTTGAAGCCAGGAGCCAACCCTATC...AGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CCA 90 bp TGCGTCTTCGGGCATTATATAAACCTCAATAATGACCTCAGAAGGGCTCATTCTGACCTGCCTGGGAGGTaGGGTGAGGGGCGCTCTTCC +
Preference number: 2 (lower is better)
Translates to: CVFGHYINLNNDLRRAHSDLPGR*GEGRSS
Trigger: GGAAGAGCGCCCCTCACCCCACCTCCCAGGCAGGTC...AGAATGAGCCCTTCTGAGGTCATTATTGAGGTTTATATAATGCCCGAAGACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 90 bp AAGTATTCTTTGTGCTGGCAGGGTTTGTGCTGTGCCCTGATGGGTTaGGTGGTGAGGGACCTTGGCTATGACTCCTTGCCCAAGTCTACA +
Preference number: 2 (lower is better)
Translates to: KYSLCWQGLCCALMG*VVRDLGYDSLPKST
Trigger: TGTAGACTTGGGCAAGGAGTCATAGCCAAGGTCCCTCACCACCAAACCCATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 90 bp TGGCATCTCTCGACCATGTCTGGGAAGGCCTGGTATGCACCCTTCTaGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTGCTGTGCCCT +
Preference number: 2 (lower is better)
Translates to: WHLSTMSGKAWYAPF*FQVFFVLAGFVLCP
Trigger: AGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGGTGCATACCAGGCCTTCCCAGACATGGTCGAGAGATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 90 bp CTTCAGCACTTCCATACTCAACAGTATCTTTTCCATGTCTTCATCTaGGTGCCCGGGACAATGGCCTGCCTGGGCTGCTTCTGTTCGCTC +
Preference number: 2 (lower is better)
Translates to: LQHFHTQQYLFHVFI*VPGTMACLGCFCSL
Trigger: GAGCGAACAGAAGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGATACTGTTGAGTATGGAAGTGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 90 bp GGGTGGCACCTGCCAATCCCTTGCAGCCAGGTTGGGATCAAGGCTTaGGAAAGACCCTTTCCTTCAATCTACAAGCACCAATGTACCTAC +
Preference number: 2 (lower is better)
Translates to: GWHLPIPCSQVGIKA*ERPFPSIYKHQCTY
Trigger: GTAGGTACATTGGTGCTTGTAGATTGAAGGAAAGGGTCTTTCCAAAGCCTTGATCCCAACCTGGCTGCAAGGGATTGGCAGGTGCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR GCA 90 bp TTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCCAAACTCCCTGCTAAGGTGCACCATTTCCCAAACATaGAGAAGGAATTGCCTACCC +
Preference number: 2 (lower is better)
Translates to: FTEPGTWLYPVPNSLLRCTISQT*RRNCLP
Trigger: GGGTAGGCAATTCCTTCTGCATGTTTGGGAAATGGT...GCACCTTAGCAGGGAGTTTGGAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 90 bp GGTATGCACCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTaGTGCTGTGCCCTGATGGGTTTGGTGGTGAGGGACCTTGGCTAT +
Preference number: 2 (lower is better)
Translates to: GMHPSCFKYSLCWQG*CCALMGLVVRDLGY
Trigger: ATAGCCAAGGTCCCTCACCACCAAACCCATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGGTGCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR TCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGCCAAAGATTGGCGTATaGCTTGCAGCACCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRPKIGV*LAAPLP
Trigger: AGGAAGAGGTGCTGCAAGTCATACGCCAATCTTTGG...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR GCA 90 bp CTTCCAAGTTACCTTCCAGGCCTCTCAGTAACTGGTAGGGACACCCATGTCCTCGCCTCTTTTCCTTGCTaGATGAGAAAGGATGCTCGT +
Preference number: 2 (lower is better)
Translates to: LPSYLPGLSVTGRDTHVLASFPC*MRKDAR
Trigger: ACGAGCATCCTTTCTCATGCAGCAAGGAAAAGAGGC...GAGGACATGGGTGTCCCTACCAGTTACTGAGAGGCCTGGAAGGTAACTTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CCA 90 bp GAAATGTCAACCACTGACTCACGACCCAAAGCAGACAGAGGACTGTTTCCACTCCCCTTCTGCCCAGGTTaGAGAAAGTGGGCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: EMSTTDSRPKADRGLFPLPFCPG*RKWAEV
Trigger: TACTTCTGCCCACTTTCTCCAACCTGGGCAGAAGGG...GAGTGGAAACAGTCCTCTGTCTGCTTTGGGTCGTGAGTCAGTGGTTGACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CCA 90 bp CCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTGCTGTGCCCTGATCTCTGGGGATCCTGGTaGTCCAGTCCAACTGAGATG +
Preference number: 2 (lower is better)
Translates to: PFLFQVFFVLAGFVLCPDLWGSW*SSPTEM
Trigger: CATCTCAGTTGGACTGGACCACCAGGATCCCCAGAG...ATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR TCA 90 bp ATCTTTTCCATGTCTTCATCTTGGTGCCCGGGACAATGGCCTGCCTGGGCTGCTGCCCACAAGCTGAACTaGGGTTTTACAGTTTTAGAA +
Preference number: 2 (lower is better)
Translates to: IFSMSSSWCPGQWPAWAAAHKLN*GFTVLE
Trigger: TTCTAAAACTGTAAAACCTCAGTTCAGCTTGTGGGC...AGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR GCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGACTCCTCCCATTTTCTaGAGACAGACTCAACAGGGT +
Preference number: 2 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRTPPIF*RQTQQG
Trigger: ACCCTGTTGAGTCTGTCTGCAGAAAATGGGAGGAGT...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR TCA 90 bp TACTCATTCTCTCTAACCCCATGCTATTCAAGTGGAGAATTACCACCAGTCTCTCTTTTCCCAGATGCCTaGGCAACTCCCAGCCATCCC +
Preference number: 2 (lower is better)
Translates to: YSFSLTPCYSSGELPPVSLFPDA*ATPSHP
Trigger: GGGATGGCTGGGAGTTGCTCAGGCATCTGGGAAAAG...AGAGACTGGTGGTAATTCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CCA 90 bp GAAATGTCAACCACTGACTCACGACCCAAAGCAGACAGAGGACTGTTTCCACTCGGAGACAGTCCTTGTTaGCACCTGGGAACTCTTTTA +
Preference number: 2 (lower is better)
Translates to: EMSTTDSRPKADRGLFPLGDSPC*HLGTLL
Trigger: TAAAAGAGTTCCCAGGTGCCAACAAGGACTGTCTCC...GAGTGGAAACAGTCCTCTGTCTGCTTTGGGTCGTGAGTCAGTGGTTGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR GCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGTTCAAGTATTCTTTGTaGTGGCAGGGTTTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRFKYSL*WQGLCC
Trigger: ACAGCACAAACCCTGCCAGCACAAAGAATACTTGAA...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR TCA 90 bp CCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTGCTGTGCCCTGATCCCAAACCAAACGCTTaGTATATAAACCTCCAACCG +
Preference number: 2 (lower is better)
Translates to: PFLFQVFFVLAGFVLCPDPKPNA*YINLQP
Trigger: CGGTTGGAGGTTTATATATCAAGCGTTTGGTTTGGG...ATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CCA 90 bp TACTCATTCTCTCTAACCCCATGCTATTCAAGTGGAGAATTACCACCAGTCTCTACTCCCAGCCATCCCTaGGGCTGGATGTTACAATGT +
Preference number: 2 (lower is better)
Translates to: YSFSLTPCYSSGELPPVSTPSHP*GWMLQC
Trigger: ACATTGTAACATCCAGCCCCAGGGATGGCTGGGAGT...AGAGACTGGTGGTAATTCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CCA 90 bp TTTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGAACAGGAGAACGGGAGTaGATGTTCTCATTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: FPSIYKHQCTYFVVWGPRTGERE*MFSFCS
Trigger: AGAGCAGAATGAGAACATCCACTCCCGTTCTCCTGT...TCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR TCA 90 bp TTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGATCAGAAGGGCTCATTCTaGTTAAAGTTGCAGTATACA +
Preference number: 2 (lower is better)
Translates to: FLQSTSTNVPTLWSGDPDQKGSF*LKLQYT
Trigger: TGTATACTGCAACTTTAATCAGAATGAGCCCTTCTG...ATCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 72 bp AGGCTGGCTCTGGGGATCCTGGTGGTCCAGTCCAACTaGGATGCTCTGTGCCTGGCAGCCAGGCGGGCGCAC +
Preference number: 3 (lower is better)
Translates to: RLALGILVVQSN*DALCLAARRAH
Trigger: GTGCGCCCGCCTGGCTGCCAGGCACAGAGCATCTCAGTTGGACTGGACCACCAGGATCCCCAGAGCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp GGCAGCCAGGCGGGCGCACTAATGGAGCTGGCTCAATaGAGACATCTGAGGAGTGAGGCTGTGGCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: GSQAGALMELAQ*RHLRSEAVAPP
Trigger: GGGAGGGGCCACAGCCTCACTCCTCAGATGTCTGCATTGAGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 72 bp TGCCAGCAGGCTAAGGGCACAGTGTCTGCTCTGGGCTaGCCCAGCCAGGGTCCCTTCTGCCCAGGTTGGAGA +
Preference number: 3 (lower is better)
Translates to: CQQAKGTVSALG*PSQGPFCPGWR
Trigger: TCTCCAACCTGGGCAGAAGGGACCCTGGCTGGGTCAGCCCAGAGCAGACACTGTGCCCTTAGCCTGCTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 72 bp ACACCCCACTACCAGCTTCCTCCTGCTCCCCGACTGTaGGAGCACAGAGGAGCCAGGCAGTGTAGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: TPHYQLPPAPRL*EHRGARQCSQA
Trigger: GGCCTGGCTACACTGCCTGGCTCCTCTGTGCTCTCACAGTCGGGGAGCAGGAGGAAGCTGGTAGTGGGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp CTGTCCTCCACGTGCCCCGAGGAGGGCAACTCTCCTTaGCAGGCCAAGCCAGCACAGCAAGAGGAGACAGTC +
Preference number: 3 (lower is better)
Translates to: LSSTCPEEGNSP*QAKPAQQEETV
Trigger: GACTGTCTCCTCTTGCTGTGCTGGCTTGGCCTGGCAAGGAGAGTTGCCCTCCTCGGGGCACGTGGAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp GGCTCTGGGGATCCTGGTGGTCCAGTCCAACTGAGATaGTCTGTGCCTGGCAGCCAGGCGGGCGCACTAATG +
Preference number: 3 (lower is better)
Translates to: GSGDPGGPVQLR*SVPGSQAGALM
Trigger: CATTAGTGCGCCCGCCTGGCTGCCAGGCACAGAGCATCTCAGTTGGACTGGACCACCAGGATCCCCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp TCCATCCCCGTGTCTGGCGTGCCGCAGCTCATCCAGTaGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACC +
Preference number: 3 (lower is better)
Translates to: SIPVSGVPQLIQ*QPRQHVESGRT
Trigger: GGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGGGATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp AAGCAGTGTGCCTCAGTAGATGCACATGCAGGAGGGTaGTGCACTCGCCTGGCCGGACTGGCAGGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: KQCASVDAHAGG*CTRLAGLAGRR
Trigger: CCTCCTGCCTGCCAGTCCGGCCAGGCGAGTGCACCACCCTCCTGCATGTGCATCTACTGAGGCACACTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp AGGTGGGGTGAGGGGCGCTCTTCCTCCCATGTCTGTTaGAACCAGCAGCCCTTGGTCAGAGGAGATGCTGGC +
Preference number: 3 (lower is better)
Translates to: RWGEGRSSSHVC*NQQPLVRGDAG
Trigger: GCCAGCATCTCCTCTGACCAAGGGCTGCTGGTTCCAACAGACATGGGAGGAAGAGCGCCCCTCACCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp TCCTGGTGGTCCAGTCCAACTGAGATGCTCTGTGCCTaGCAGCCAGGCGGGCGCACTAATGGAGCTGGCTCA +
Preference number: 3 (lower is better)
Translates to: SWWSSPTEMLCA*QPGGRTNGAGS
Trigger: TGAGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCCAGGCACAGAGCATCTCAGTTGGACTGGACCACCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp CCCAGCCAGGGTCCCTTCTGCCCAGGTTGGAGAAAGTaGGCAGAAGTAGGCAGATTAGCCACCCAGCAGGCT +
Preference number: 3 (lower is better)
Translates to: PSQGPFCPGWRK*AEVGRLATQQA
Trigger: AGCCTGCTGGGTGGCTAATCTGCCTACTTCTGCCCACTTTCTCCAACCTGGGCAGAAGGGACCCTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp CATCCAAAGCTTCATAGCCCACACACATCAGGAGGCTaGGGCGAGGGGGCTGCCGGTCTCTATGAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: HPKLHSPHTSGG*GEGAAGLYEQL
Trigger: CAGCTGCTCATAGAGACCGGCAGCCCCCTCGCCCCAGCCTCCTGATGTGTGTGGGCTATGAAGCTTTGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp GATCTAAGGTTCGCTGTGGAGACGGAAGGCTCGCTGTaGAGACGGGAGGCACTGCTGTGTGGACAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: DLRFAVETEGSL*RREALLCGQLQ
Trigger: CTGCAGCTGTCCACACAGCAGTGCCTCCCGTCTCCACAGCGAGCCTTCCGTCTCCACAGCGAACCTTAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp ACGTGCAATGCGGGGATCCCGGGCCCAGGGCATTCCTaGTCTTCCCTTTCTCCTAAGTGTGCATGCCCATCA +
Preference number: 3 (lower is better)
Translates to: TCNAGIPGPGHS*SSLSPKCACPS
Trigger: TGATGGGCATGCACACTTAGGAGAAAGGGAAGAGCAGGAATGCCCTGGGCCCGGGATCCCCGCATTGCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp TTGTCAGAAGCTGCGCGTCCCTTGGGACCTGCCCAATaGCAAGGACTAGTTCAATGGAGACTGCCTGCCCGG +
Preference number: 3 (lower is better)
Translates to: LSEAARPLGPAQ*QGLVQWRLPAR
Trigger: CCGGGCAGGCAGTCTCCATTGAACTAGTCCTTGGCATTGGGCAGGTCCCAAGGGACGCGCAGCTTCTGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp GTAAACTCAGAAGCAGTGTGCCTCAGTAGATGCACATaGAGGAGGGTGGTGCACTCGCCTGGCCGGACTGGC +
Preference number: 3 (lower is better)
Translates to: VNSEAVCLSRCT*RRVVHSPGRTG
Trigger: GCCAGTCCGGCCAGGCGAGTGCACCACCCTCCTGCATGTGCATCTACTGAGGCACACTGCTTCTGAGTTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp CTGTCCCAAGTCAAAGGCACGTATGGCATCCACTCCTaGCATGAGGGGAGTCCTGGAAGGACACTGCGGGCT +
Preference number: 3 (lower is better)
Translates to: LSQVKGTYGIHS*HEGSPGRTLRA
Trigger: AGCCCGCAGTGTCCTTCCAGGACTCCCCTCATGCCAGGAGTGGATGCCATACGTGCCTTTGACTTGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp GCTCTTCCTCCCATGTCTGTTGGAACCAGCAGCCCTTaGTCAGAGGAGATGCTGGCAGCTCAGCCACAGGCT +
Preference number: 3 (lower is better)
Translates to: ALPPMSVGTSSP*SEEMLAAQPQA
Trigger: AGCCTGTGGCTGAGCTGCCAGCATCTCCTCTGACCAAGGGCTGCTGGTTCCAACAGACATGGGAGGAAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp GACTCAGCTCCAGGCCTACTGCAGGCCTGTAGGAACTaGCTCTCACTGGGTAAGTGGGGCTTACAGCACGCA +
Preference number: 3 (lower is better)
Translates to: DSAPGLLQACRN*LSLGKWGLQHA
Trigger: TGCGTGCTGTAAGCCCCACTTACCCAGTGAGAGCCAGTTCCTACAGGCCTGCAGTAGGCCTGGAGCTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp GCAGGCTGCCCTCTTTCCCTCTTGGGCAGGAACCTGAACACTTTGTTTCACCGAGGAGGGCAACTCTCCTaGCCAGGCCAAGCCAGCACA +
Preference number: 3 (lower is better)
Translates to: AGCPLSLLGRNLNTLFHRGGQLS*PGQAST
Trigger: TGTGCTGGCTTGGCCTGGCAAGGAGAGTTGCCCTCC...TCGGTGAAACAAAGTGTTCAGGTTCCTGCCCAAGAGGGAAAGAGGGCAGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp GTGGGCAGAAGTAGGCAGATTAGCCACCCAGCAGGCTaGCCTCTTTCCCTCTTGGGCAGGAACCTGAACACT +
Preference number: 3 (lower is better)
Translates to: VGRSRQISHPAG*PLSLLGRNLNT
Trigger: AGTGTTCAGGTTCCTGCCCAAGAGGGAAAGAGGGCAGCCTGCTGGGTGGCTAATCTGCCTACTTCTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp GATGAATGGGTGGCCAGGACTCAGCTCCAGGCCTACTaGAGGCCTGTAGGAACTGGCTCTCACTGGGTAAGT +
Preference number: 3 (lower is better)
Translates to: DEWVARTQLQAY*RPVGTGSHWVS
Trigger: ACTTACCCAGTGAGAGCCAGTTCCTACAGGCCTGCAGTAGGCCTGGAGCTGAGTCCTGGCCACCCATTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp AGCAGCTCATTAGCTCTAAGGAAAAGCCCTCTCGCCTaGGGAGGGCTAGGATTCAGGGACACATCGCCTGGC +
Preference number: 3 (lower is better)
Translates to: SSSLALRKSPLA*GGLGFRDTSPG
Trigger: GCCAGGCGATGTGTCCCTGAATCCTAGCCCTCCCCAGGCGAGAGGGCTTTTCCTTAGAGCTAATGAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp TGTCACCACCACGGGCTTTTGACAGAGGAGGCTAGTGGGTTGCATCCACCTGTGTGCCCTCTTTCCCTCTaGGGCAGGAACCTGAACACT +
Preference number: 3 (lower is better)
Translates to: CHHHGLLTEEASGLHPPVCPLSL*GRNLNT
Trigger: AGTGTTCAGGTTCCTGCCCAAGAGGGAAAGAGGGCA...CACAGGTGGATGCAACCCACTAGCCTCCTCTGTCAAAAGCCCGTGGTGGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp GGGCATTCCTGCTCTTCCCTTTCTCCTAAGTGTGCATaGCCATCACACCCTCCCTTCCAGCTGGAGGGTGTA +
Preference number: 3 (lower is better)
Translates to: GHSCSSLSPKCA*PSHPPFQLEGV
Trigger: TACACCCTCCAGCTGGAAGGGAGGGTGTGATGGGCATGCACACTTAGGAGAAAGGGAAGAGCAGGAATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp TGCAAAACAGGAGAACGGGAGTGGATGTTCTCATTCTaGTCTGGGGACCGGCCCAGGAGGTCAAGAGCACCA +
Preference number: 3 (lower is better)
Translates to: CKTGEREWMFSF*SGDRPRRSRAP
Trigger: TGGTGCTCTTGACCTCCTGGGCCGGTCCCCAGAGCAGAATGAGAACATCCACTCCCGTTCTCCTGTTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp TTTAGAGAGGGGAGAGGGTGGCACCTGCCAATCCCTTaGAGCCAGGTTGGGATCAAGGCTTTGGAAAGACCC +
Preference number: 3 (lower is better)
Translates to: FREGRGWHLPIP*SQVGIKALERP
Trigger: GGGTCTTTCCAAAGCCTTGATCCCAACCTGGCTGCAAGGGATTGGCAGGTGCCACCCTCTCCCCTCTCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp CTCTCAGCCTTCCCACACCTACCTAAAAGACATCTCTaGAAGCTTCCACCCCGTGCAAGGACGGTAAGCGCC +
Preference number: 3 (lower is better)
Translates to: LSAFPHLPKRHL*KLPPRARTVSA
Trigger: GGCGCTTACCGTCCTTGCACGGGGTGGAAGCTTCCAGAGATGTCTTTTAGGTAGGTGTGGGAAGGCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp GCTCCTGCTGACCACAGTAGGCTGGCCGGGGATGAGTaGACACTAGGAAATCCCTGTGATTTAGGAGTCCCA +
Preference number: 3 (lower is better)
Translates to: APADHSRLAGDE*TLGNPCDLGVP
Trigger: TGGGACTCCTAAATCACAGGGATTTCCTAGTGTCCACTCATCCCCGGCCAGCCTACTGTGGTCAGCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp TCTAGGTGGGTCAGAGCCCCAGGCCCTTCCCTCAGCTaGTGTGGTCTGTCCAATATCACAAAGCAGCTCATT +
Preference number: 3 (lower is better)
Translates to: SRWVRAPGPSLS*CGLSNITKQLI
Trigger: AATGAGCTGCTTTGTGATATTGGACAGACCACAGCAGCTGAGGGAAGGGCCTGGGGCTCTGACCCACCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp CTCGGGTGGCTACCTCCCACAACTCCTCCCATTTTCTaGAGACAGACTCAACAGGGTCTCCACTGTCCCAAA +
Preference number: 3 (lower is better)
Translates to: LGWLPPTTPPIF*RQTQQGLHCPK
Trigger: TTTGGGACAGTGGAGACCCTGTTGAGTCTGTCTGCAGAAAATGGGAGGAGTTGTGGGAGGTAGCCACCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp ACACATGTTGTCAGAAGCTGCGCGTCCCTTGGGACCTaGCCAATGCCAAGGACTAGTTCAATGGAGACTGCC +
Preference number: 3 (lower is better)
Translates to: THVVRSCASLGT*PMPRTSSMETA
Trigger: GGCAGTCTCCATTGAACTAGTCCTTGGCATTGGGCAGGTCCCAAGGGACGCGCAGCTTCTGACAACATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp CGTAACCCAGTAGCTCATGAATCCCCGGGGGTCTCATaGCAAGGAGAGGATGGAGGTGGGTGCCCTAATTTA +
Preference number: 3 (lower is better)
Translates to: RNPVAHESPGVS*QGEDGGGCPNL
Trigger: TAAATTAGGGCACCCACCTCCATCCTCTCCTTGGCATGAGACCCCCGGGGATTCATGAGCTACTGGGTTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp TGGACAGCTGCAGGCCCTACTGTCTCACTCCTCATCTaGCAGCCTGCCTGTCCTTCAGAAACAAACCGTAAC +
Preference number: 3 (lower is better)
Translates to: WTAAGPTVSLLI*QPACPSETNRN
Trigger: GTTACGGTTTGTTTCTGAAGGACAGGCAGGCTGGCAGATGAGGAGTGAGACAGTAGGGCCTGCAGCTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp TTTGAAGTAAACTCAGAAGCAGTGTGCCTCAGTAGATaGACATGCAGGAGGGTGGTGCACTCGCCTGGCCGG +
Preference number: 3 (lower is better)
Translates to: FEVNSEAVCLSR*TCRRVVHSPGR
Trigger: CCGGCCAGGCGAGTGCACCACCCTCCTGCATGTGCATCTACTGAGGCACACTGCTTCTGAGTTTACTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp TCCACCGGCTCGTTCTCATCACACGGTAGCAGTAGCTaGTCACTTCTGCCTTCCAAGTTACCTTCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: STGSFSSHGSSS*SLLPSKLPSRP
Trigger: AGGCCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGAGAACGAGCCGGTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp CACAGAGGAGCCAGGCAGTGTAGCCAGGCCAGCTACTaGCAAAGGATACGGTTTGAAGACTTTTCCCTCCAC +
Preference number: 3 (lower is better)
Translates to: HRGARQCSQASY*QRIRFEDFSLH
Trigger: GTGGAGGGAAAAGTCTTCAAACCGTATCCTTTGCCAGTAGCTGGCCTGGCTACACTGCCTGGCTCCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp CCCTTGGGACCTGCCCAATGCCAAGGACTAGTTCAATaGAGACTGCCTGCCCGGTACTCATTCTCTCTAACC +
Preference number: 3 (lower is better)
Translates to: PLGPAQCQGLVQ*RLPARYSFSLT
Trigger: GGTTAGAGAGAATGAGTACCGGGCAGGCAGTCTCCATTGAACTAGTCCTTGGCATTGGGCAGGTCCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp TGTCAAGGTCACTTGAGATTTAGAGAGGGGAGAGGGTaGCACCTGCCAATCCCTTGCAGCCAGGTTGGGATC +
Preference number: 3 (lower is better)
Translates to: CQGHLRFREGRG*HLPIPCSQVGI
Trigger: GATCCCAACCTGGCTGCAAGGGATTGGCAGGTGCCACCCTCTCCCCTCTCTAAATCTCAAGTGACCTTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp CTTCCAAGTTACCTTCCAGGCCTCTCAGTAACTGGTAGGGACACCCATGTCCTCTCCCTTCTGCCCAGGTaGGAGAAAGTGGGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: LPSYLPGLSVTGRDTHVLSLLPR*EKVGRS
Trigger: ACTTCTGCCCACTTTCTCCAACCTGGGCAGAAGGGA...GAGGACATGGGTGTCCCTACCAGTTACTGAGAGGCCTGGAAGGTAACTTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp CAGAATCGTGTGAATGACACACATGTTGTCAGAAGCTaGGCGTCCCTTGGGACCTGCCCAATGCCAAGGACT +
Preference number: 3 (lower is better)
Translates to: QNRVNDTHVVRS*ASLGTCPMPRT
Trigger: AGTCCTTGGCATTGGGCAGGTCCCAAGGGACGCGCAGCTTCTGACAACATGTGTGTCATTCACACGATTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp TCAGGGACACATCGCCTGGCATCTCTCGACCATGTCTaGGAAGGCCTGGTATGCACCCTTCTTGTTTCAAGT +
Preference number: 3 (lower is better)
Translates to: SGTHRLASLDHV*EGLVCTLLVSS
Trigger: ACTTGAAACAAGAAGGGTGCATACCAGGCCTTCCCAGACATGGTCGAGAGATGCCAGGCGATGTGTCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp TCAAGCACACATCCAAAGCTTCATAGCCCACACACATCAGGAGGCTGGGGCGAGAGGAGACAGTCCTTGTaGGCACCTGGGAACTCTTTT +
Preference number: 3 (lower is better)
Translates to: SSTHPKLHSPHTSGGWGERRQSL*APGNSF
Trigger: AAAAGAGTTCCCAGGTGCCAACAAGGACTGTCTCCT...CTCGCCCCAGCCTCCTGATGTGTGTGGGCTATGAAGCTTTGGATGTGTGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp TTTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGAGAAGCTGCGCGTCCCTaGGGACCTGCCCAATGCCAA +
Preference number: 3 (lower is better)
Translates to: FPSIYKHQCTYFVVWGPREAARP*GPAQCQ
Trigger: TTGGCATTGGGCAGGTCCCAAGGGACGCGCAGCTTC...TCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 72 bp CCTTGGGCTAAAGTAACAGGAATGGATAGTATGGAGTaGCCTCTAAGGTCCCCCACCCTCCCTGTCCCACTT +
Preference number: 3 (lower is better)
Translates to: PWAKVTGMDSME*PLRSPTLPVPL
Trigger: AAGTGGGACAGGGAGGGTGGGGGACCTTAGAGGTCACTCCATACTATCCATTCCTGTTACTTTAGCCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 72 bp CCCCAAACGGGACTTATCAAAAATCCCAGCCGGTCATaGGGAGCCTTCCACACTCACAGGAAGCGATCTAAG +
Preference number: 3 (lower is better)
Translates to: PQTGLIKNPSRS*GAFHTHRKRSK
Trigger: CTTAGATCGCTTCCTGTGAGTGTGGAAGGCTCCTCATGACCGGCTGGGATTTTTGATAAGTCCCGTTTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 72 bp TGGCGTATGACTTGCAGCACCTCTTCCTTAAGACAATaGTACTGGAAGCCCGGATGGGGCCCAGTGAACAAG +
Preference number: 3 (lower is better)
Translates to: WRMTCSTSSLRQ*YWKPGWGPVNK
Trigger: CTTGTTCACTGGGCCCCATCCGGGCTTCCAGTATCATTGTCTTAAGGAAGAGGTGCTGCAAGTCATACGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp GAAATGTCAACCACTGACTCACGACCCAAAGCAGACAGAGGACTGTTTCCACTCAAGTCCTCCATCTTCTaGGGTACCTTGCCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: EMSTTDSRPKADRGLFPLKSSIF*GTLPAG
Trigger: GCCTGCTGGCAAGGTACCCAAGAAGATGGAGGACTT...GAGTGGAAACAGTCCTCTGTCTGCTTTGGGTCGTGAGTCAGTGGTTGACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp TTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGATAAAGGGCTGAGCTCTTaGGAGACGCTGCCAAAGCCC +
Preference number: 3 (lower is better)
Translates to: FLQSTSTNVPTLWSGDPDKGLSS*ETLPKP
Trigger: GGGCTTTGGCAGCGTCTCCAAAGAGCTCAGCCCTTT...ATCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 72 bp GCACGATTAGGCTTTTCCCACATGGCCTGTGCTAAATaGCATATGGTCCATCCGCATGCAACGTGCAATGCG +
Preference number: 3 (lower is better)
Translates to: ARLGFSHMACAK*HMVHPHATCNA
Trigger: CGCATTGCACGTTGCATGCGGATGGACCATATGTCATTTAGCACAGGCCATGTGGGAAAAGCCTAATCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp TTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTGCTGTaGCCTGATGGGTTTGGTGGTGAGGGACCTTGGCTA +
Preference number: 3 (lower is better)
Translates to: FQVFFVLAGFVL*PDGFGGEGPWL
Trigger: TAGCCAAGGTCCCTCACCACCAAACCCATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp CTGGCATCTCTCGACCATGTCTGGGAAGGCCTGGTATaGACCCTTCTTGTTTCAAGTATTCTTTGTGCTGGC +
Preference number: 3 (lower is better)
Translates to: LASLDHVWEGLV*TLLVSSILCAG
Trigger: GCCAGCACAAAGAATACTTGAAACAAGAAGGGTGCATACCAGGCCTTCCCAGACATGGTCGAGAGATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp TGCCCAATGCCAAGGACTAGTTCAATGGAGACTGCCTaGCCGGTACTCATTCTCTCTAACCCCATGCTATTC +
Preference number: 3 (lower is better)
Translates to: CPMPRTSSMETA*PVLILSNPMLF
Trigger: GAATAGCATGGGGTTAGAGAGAATGAGTACCGGGCAGGCAGTCTCCATTGAACTAGTCCTTGGCATTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp CGTTCTCATCACACGGTAGCAGTAGCTGCTCACTTCTaGCTTCCAAGTTACCTTCCAGGCCTCTCAGTAACT +
Preference number: 3 (lower is better)
Translates to: RSHHTVAVAAHF*LPSYLPGLSVT
Trigger: AGTTACTGAGAGGCCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGAGAACG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp GGCCAAGCCAGCACAGCAAGAGGAGACAGTCCTTGTTaGCACCTGGGAACTCTTTTAACTACCAAACATAGG +
Preference number: 3 (lower is better)
Translates to: GQASTARGDSPC*HLGTLLTTKHR
Trigger: CCTATGTTTGGTAGTTAAAAGAGTTCCCAGGTGCCAACAAGGACTGTCTCCTCTTGCTGTGCTGGCTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp ATCTTTTCCATGTCTTCATCTTGGTGCCCGGGACAATaGCCTGCCTGGGCTGCTTCTGTTCGCTCTGTTAAT +
Preference number: 3 (lower is better)
Translates to: IFSMSSSWCPGQ*PAWAASVRSVN
Trigger: ATTAACAGAGCGAACAGAAGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp TCCATACTCAACAGTATCTTTTCCATGTCTTCATCTTaGTGCCCGGGACAATGGCCTGCCTGGGCTGCTTCT +
Preference number: 3 (lower is better)
Translates to: SILNSIFSMSSS*CPGQWPAWAAS
Trigger: AGAAGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGATACTGTTGAGTATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp TACTCATTCTCTCTAACCCCATGCTATTCAAGTGGAGAATTACCACCAGTCTCTGCCGAGTTCTGGAACTaGCTCCTCGCCCCCAAGAAG +
Preference number: 3 (lower is better)
Translates to: YSFSLTPCYSSGELPPVSAEFWN*LLAPKK
Trigger: CTTCTTGGGGGCGAGGAGCAAGTTCCAGAACTCGGC...AGAGACTGGTGGTAATTCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp TCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTaGTGTGCCCTGATGGGTTTGGTGGTGAGGGACCTT +
Preference number: 3 (lower is better)
Translates to: SCFKYSLCWQGL*CALMGLVVRDL
Trigger: AAGGTCCCTCACCACCAAACCCATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp ACAGTACTATATAAACGGGACATACCAGCAAGGCCGTaGTTGCTATCCTTGGGGAGCCGAGTTCTGGAACTT +
Preference number: 3 (lower is better)
Translates to: TVLYKRDIPARP*LLSLGSRVLEL
Trigger: AAGTTCCAGAACTCGGCTCCCCAAGGATAGCAAGCACGGCCTTGCTGGTATGTCCCGTTTATATAGTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp ATACTCAACAGTATCTTTTCCATGTCTTCATCTTGGTaGCCGGGACAATGGCCTGCCTGGGCTGCTTCTGTT +
Preference number: 3 (lower is better)
Translates to: ILNSIFSMSSSW*PGQWPAWAASV
Trigger: AACAGAAGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGATACTGTTGAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp ATCGCCTGGCATCTCTCGACCATGTCTGGGAAGGCCTaGTATGCACCCTTCTTGTTTCAAGTATTCTTTGTG +
Preference number: 3 (lower is better)
Translates to: IAWHLSTMSGKA*YAPFLFQVFFV
Trigger: CACAAAGAATACTTGAAACAAGAAGGGTGCATACCAGGCCTTCCCAGACATGGTCGAGAGATGCCAGGCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp GGAGGCAGACTCAGCAATCAGAACCGTAGGTTCTATTaGAGCCTTGGGAATAAATGTCCCAATGAGGTCACC +
Preference number: 3 (lower is better)
Translates to: GGRLSNQNRRFY*SLGNKCPNEVT
Trigger: GGTGACCTCATTGGGACATTTATTCCCAAGGCTCCAATAGAACCTACGGTTCTGATTGCTGAGTCTGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp TTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGATAAGAGGAGACAGTCCTaGTTGGCACCTGGGAACTCT +
Preference number: 3 (lower is better)
Translates to: FLQSTSTNVPTLWSGDPDKRRQS*LAPGNS
Trigger: AGAGTTCCCAGGTGCCAACAAGGACTGTCTCCTCTT...ATCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR TCA 72 bp TACAATCTCCAACACATCACAAGGGCAATGCAAGAATaGCTTCCAGAGGCAAGAAGCCAGCCACTGAAGTGG +
Preference number: 3 (lower is better)
Translates to: YNLQHITRAMQE*LPEARSQPLKW
Trigger: CCACTTCAGTGGCTGGCTTCTTGCCTCTGGAAGTCATTCTTGCATTGCCCTTGTGATGTGTTGGAGATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp GAGACCAATACAATCTCCAACACATCACAAGGGCAATaGAAGAATGACTTCCAGAGGCAAGAAGCCAGCCAC +
Preference number: 3 (lower is better)
Translates to: ETNTISNTSQGQ*KNDFQRQEASH
Trigger: GTGGCTGGCTTCTTGCCTCTGGAAGTCATTCTTGCATTGCCCTTGTGATGTGTTGGAGATTGTATTGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp GAGCTTAGGAAACATGGGGACATGAGACTATCAGATTaGCCCAAACGGGACTTATCAAAAATCCCAGCCGGT +
Preference number: 3 (lower is better)
Translates to: ELRKHGDMRLSD*PKRDLSKIPAG
Trigger: ACCGGCTGGGATTTTTGATAAGTCCCGTTTGGGGCAATCTGATAGTCTCATGTCCCCATGTTTCCTAAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp TACCCAGTTCCAAACTCCCTGCTAAGGTGCCATGCTTaGGCACTGTGTACACAGTGGAAACCTAAACAAACA +
Preference number: 3 (lower is better)
Translates to: YPVPNSLLRCHA*ALCTQWKPKQT
Trigger: TGTTTGTTTAGGTTTCCACTGTGTACACAGTGCCCAAGCATGGCACCTTAGCAGGGAGTTTGGAACTGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGTGTCCCAAATCCCTCTaGGTAATATTGCACTTTTCC +
Preference number: 3 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRCPKSL*VILHFS
Trigger: GGAAAAGTGCAATATTACCAAGAGGGATTTGGGACA...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp TTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGATTCCTGCCTCTTTTCCTaGCTGCATGAGAAAGGATGC +
Preference number: 3 (lower is better)
Translates to: FLQSTSTNVPTLWSGDPDSCLFS*LHEKGC
Trigger: GCATCCTTTCTCATGCAGCAAGGAAAAGAGGCAGGA...ATCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp CACCCTCCAGATGAGTTTGCTTATGGCCAGGATTCCTaGCCACAAGCTGAACTGAGGTTTTACAGTTTTAGA +
Preference number: 3 (lower is better)
Translates to: HPPDEFAYGQDS*PQAELRFYSFR
Trigger: TCTAAAACTGTAAAACCTCAGTTCAGCTTGTGGGCAGGAATCCTGGCCATAAGCAAACTCATCTGGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp CTCTCAGTAACTGGTAGGGACACCCATGTCCTCTGTTaGAGGAGACAAGTTGTAAATCTAAGGATGGCAACT +
Preference number: 3 (lower is better)
Translates to: LSVTGRDTHVLC*RRQVVNLRMAT
Trigger: AGTTGCCATCCTTAGATTTACAACTTGTCTCCTGCAACAGAGGACATGGGTGTCCCTACCAGTTACTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp TGGTTAGTGATGTGGACTGTTGTCTTTCCAGAGAGCTaGATGGGTATTCCAATTACGGCTATGCAGCCATAT +
Preference number: 3 (lower is better)
Translates to: WLVMWTVVFPES*MGIPITAMQPY
Trigger: ATATGGCTGCATAGCCGTAATTGGAATACCCATGCAGCTCTCTGGAAAGACAACAGTCCACATCACTAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp GTGTGGCCTATTATGGTCAGTGGTGTCTATTTTGTATaGTTTGACAGGCTAGCTCTGCATGGGACAAAATGC +
Preference number: 3 (lower is better)
Translates to: VWPIMVSGVYFV*FDRLALHGTKC
Trigger: GCATTTTGTCCCATGCAGAGCTAGCCTGTCAAACCATACAAAATAGACACCACTGACCATAATAGGCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp TATATAAACCTCCAACCGATAACCATTTCCCAAACATaGAGAAGGAATTGCCTACCCGGAAATCCTCGAGCA +
Preference number: 3 (lower is better)
Translates to: YINLQPITISQT*RRNCLPGNPRA
Trigger: TGCTCGAGGATTTCCGGGTAGGCAATTCCTTCTGCATGTTTGGGAAATGGTTATCGGTTGGAGGTTTATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp CCGGTACTCATTCTCTCTAACCCCATGCTATTCAAGTaGAGAATTACCACCAGTCTCTTTCTTCTTACACAC +
Preference number: 3 (lower is better)
Translates to: PVLILSNPMLFK*RITTSLFLLTH
Trigger: GTGTGTAAGAAGAAAGAGACTGGTGGTAATTCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CCA 72 bp GTCCCTCTTCCTATCTGTATAGAAATTCACACAAGATaGGTCAGAGCAGCAGGCCTACAGTACTATATAAAC +
Preference number: 3 (lower is better)
Translates to: VPLPICIEIHTR*VRAAGLQYYIN
Trigger: GTTTATATAGTACTGTAGGCCTGCTGCTCTGACCCATCTTGTGTGAATTTCTATACAGATAGGAAGAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp TACTCATTCTCTCTAACCCCATGCTATTCAAGTGGAGAATTACCACCAGTCTCTTCCCTCTTGGTAATATaGCACTTTTCCTGTCTCAGA +
Preference number: 3 (lower is better)
Translates to: YSFSLTPCYSSGELPPVSSLLVI*HFSCLR
Trigger: TCTGAGACAGGAAAAGTGCAATATTACCAAGAGGGA...AGAGACTGGTGGTAATTCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR-3UTR CAA 90 bp TACTCATTCTCTCTAACCCCATGCTATTCAAGTGGAGAATTACCACCAGTCTCTTGGTATGCACCCTTCTaGTTTCAAGTATTCTTTGTG +
Preference number: 3 (lower is better)
Translates to: YSFSLTPCYSSGELPPVSWYAPF*FQVFFV
Trigger: CACAAAGAATACTTGAAACAAGAAGGGTGCATACCA...AGAGACTGGTGGTAATTCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR GCA 72 bp ATAAATGCCAGTAAAATACTCTCTAACATCTCAAAGTaGCTACGAGGGCGCTATATAATGCCTTCGTCCATT +
Preference number: 3 (lower is better)
Translates to: INASKILSNISK*LRGRYIMPSSI
Trigger: AATGGACGAAGGCATTATATAGCGCCCTCGTAGGCACTTTGAGATGTTAGAGAGTATTTTACTGGCATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGCGGTGCCCGAGGTCTTaGCGAAGCCCCCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVERCPRS*RSPREA
Trigger: AGCCTCCCGGGGGCTTCGGCAAGACCTCGGGCACCG...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGCCCGGAGCTGGCCTGTaGGCCTCAGCTGGCGCCGTA +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVEPGAGL*ASAGAV
Trigger: TACGGCGCCAGCTGAGGCCCACAGGCCAGCTCCGGG...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCGGCCAGGCGGCCCTTaGCCTCAGCGGCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSRPGGP*PQRLLT
Trigger: GGTCAGCAGCCGCTGAGGCCAAGGGCCGCCTGGCCG...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGGCCTTCTCCAGCACGTaGACCTCGGCGCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVEAFSST*TSAPSG
Trigger: CCCCGAAGGCGCCGAGGTGCACGTGCTGGAGAAGGC...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGAGGGGCGATCCTaGCCACAGCTGGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVESEGRS*PQLGSP
Trigger: AGGGCTCCCCAGCTGTGGCCAGGATCGCCCCTCAGA...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGCTGTGCTGCCTGTTaGCCATCCCGCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESGCAAC*PSRPGS
Trigger: GGACCCTGGGCGGGATGGTCAACAGGCAGCACAGCC...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGATCTGGGCCCTCTaGGGGGCGATCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSLIWAL*GAILAT
Trigger: TGTGGCCAGGATCGCCCCTCAGAGGGCCCAGATCAG...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGCAGGCGCCGCAGGTGTaGCTTGCGTCTCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVEQAPQV*LASLGH
Trigger: GTGTCCAAGAGACGCAAGGCACACCTGCGGCGCCTG...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGGTTGGTGTCGGCACCTaGCGAGGGCAGAAAGCACGC +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVEVGVGT*RGQKAR
Trigger: GCGTGCTTTCTGCCCTCGCCAGGTGCCGACACCAAC...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTTCATGGGCTCGGCGTTaGTGTCGGCACCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSSWARR*CRHLAR
Trigger: CCTCGCCAGGTGCCGACACCAACGCCGAGCCCATGA...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp CAACGTGCAATGCGGGGATCCCGGGCCCAGGGCATTCCTGCTCTTCCCTTTCTCCTGATCTGGGCCCTCTaGGGGGCGATCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: QRAMRGSRAQGIPALPFLLIWAL*GAILAT
Trigger: TGTGGCCAGGATCGCCCCTCAGAGGGCCCAGATCAG...GAGAAAGGGAAGAGCAGGAATGCCCTGGGCCCGGGATCCCCGCATTGCACGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCGCCTTCGGGGAAGCTaGTCTCCGAGTCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSRLRGS*SPSPGP
Trigger: AGGTCCAGGACTCGGAGATCAGCTTCCCCGAAGGCG...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGGCCGCAGGTGTGCCTTaGGTCTCTTGGACACTTCCC +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVEAAGVP*VSWTLP
Trigger: GGGAAGTGTCCAAGAGACGCAAGGCACACCTGCGGC...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGCAGGTAGGACGCTGGTaGCCAACCCTCTTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVEQVGRW*PTLFAE
Trigger: CTCGGCAAAGAGGGTTGGGCACCAGCGTCCTACCTG...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp CCATCTTGTCCATCCCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCCTGACGGCCACTTaGCGGACCCCGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: PSCPSPCLACRSSSSGSQGLTAT*RTPFLI
Trigger: GATGAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCC...TTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGGGATGGACAAGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGCCTGACGGCCACTTaGCGGACCCCGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESGLTAT*RTPFLI
Trigger: GATGAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCC...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGACCACCTCCCCGGCCTaGAGGCTCAGCTCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLTTSPA*RLSSEF
Trigger: GAACTCGGAGCTGAGCCTCCAGGCCGGGGAGGTGGT...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGAGGGGATGGGTGGGGTaGCCCTCTTGCTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVERGWVG*PSCSGS
Trigger: TGAACCAGAGCAAGAGGGCCACCCCACCCATCCCCT...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp TTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCCAAACTCCCTGCTAAGGTGCCGGCCAGGCGGCCCTTaGCCTCAGCGGCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: FTEPGTWLYPVPNSLLRCRPGGP*PQRLLT
Trigger: GGTCAGCAGCCGCTGAGGCCAAGGGCCGCCTGGCCG...GCACCTTAGCAGGGAGTTTGGAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTGGCGATTCTGAGCCCTaGCTGGCAGCCCGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCAGDSEP*LAARSA
Trigger: GGCCGAGCGGGCTGCCAGCCAGGGCTCAGAATCGCC...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTTCAGATTTGGGGAGCTaGTCTGGGCCCTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSSDLGS*SGPSEG
Trigger: CCCCTCAGAGGGCCCAGATCAGCTCCCCAAATCTGA...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGCGCTTGTCAATGTATaGGGCTGGGGCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESALVNV*GWGPAL
Trigger: GAGGGCTGGGCCCCAGCCTCATACATTGACAAGCGC...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTCGCCTTCGGGGAAGCTaGTCTCCGAGTCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESRLRGS*SPSPGP
Trigger: AGGTCCAGGACTCGGAGATCAGCTTCCCCGAAGGCG...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTTCTTCTCGGCTGTGCTaGCTGTTGACCATCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSSSRLC*LLTIPP
Trigger: GGGCGGGATGGTCAACAGGCAGCACAGCCGAGAAGA...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTCCAGGCTGGATTCTCTaGGCGGGGGAGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESPGWIL*AGEVLS
Trigger: GGACAAGACCTCCCCCGCGCAGAGAATCCAGCCTGG...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGCGGGGCTGGGCGGGATaGTTGTCACCTGAACCTCTG +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLRGWAG*LSPEPL
Trigger: CAGAGGTTCAGGTGACAAGCATCCCGCCCAGCCCCG...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCACACTGTGAAATGTaGGGCGGCAGCCGGACAAGC +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVESHCEM*GGSRTS
Trigger: GCTTGTCCGGCTGCCGCCCCACATTTCACAGTGTGA...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCCAAGGCGCTGCCATTaGAGGCGTTGCAGAGGATCG +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSPRRCH*RRCRGS
Trigger: CGATCCTCTGCAACGCCTCCAATGGCAGCGCCTTGG...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGCGCTCGGTTCAGGACTaGCTTTGGTCTCACGGATGG +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVERSVQD*LWSHGW
Trigger: CCATCCGTGAGACCAAAGCCAGTCCTGAACCGAGCG...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGGCTGTGTCAGGTTGCTaGTTCTCCTCGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVEAVSGC*FSSATK
Trigger: CTTGGTGGCCGAGGAGAACCAGCAACCTGACACAGC...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGCTTCGAGGGGATGGGTaGGGTGGCCCTCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLLRGDG*GGPLAL
Trigger: CAGAGCAAGAGGGCCACCCCACCCATCCCCTCGAAG...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp TTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCCAAACTCCCTGCTAAGGTGCGGCGATTCTGAGCCCTaGCTGGCAGCCCGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: FTEPGTWLYPVPNSLLRCGDSEP*LAARSA
Trigger: GGCCGAGCGGGCTGCCAGCCAGGGCTCAGAATCGCC...GCACCTTAGCAGGGAGTTTGGAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTATGGACACCCCCTCCTaGAAGCCAGCCGTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSMDTPS*KPAVSS
Trigger: CGAAGAGACGGCTGGCTTCCAGGAGGGGGTGTCCAT...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp ACTTCCAGAGGCAAGAAGCCAGCCACTGAAGTGGCTGAGCAGGGCAGGACCCAGGCGCTTGTCAATGTATaGGGCTGGGGCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TSRGKKPATEVAEQGRTQALVNV*GWGPAL
Trigger: GAGGGCTGGGCCCCAGCCTCATACATTGACAAGCGC...CTGGGTCCTGCCCTGCTCAGCCACTTCAGTGGCTGGCTTCTTGCCTCTGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGCTTTTCCAGGCTGTCTaGCTTGCCCTCGTTCTGCGA +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVELFQAV*LALVLR
Trigger: TCGCAGAACGAGGGCAAGTCAGACAGCCTGGAAAAG...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCCGAGTCGTCTCGTGTaGCATTCTGGGCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSPSRLV*HSGPPS
Trigger: ACTTGGAGGCCCAGAATGGCACACGAGACGACTCGG...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp TGGCAGCCAGGCGGGCGCACTAATGGAGCTGGCTCAATGCAGACATCTGAGGAGCAGGCGCCGCAGGTGTaGCTTGCGTCTCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: WQPGGRTNGAGSMQTSEEQAPQV*LASLGH
Trigger: GTGTCCAAGAGACGCAAGGCACACCTGCGGCGCCTG...CTCCTCAGATGTCTGCATTGAGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTTCCTTCTCCCCGATCTaGACGTACCACCAACCACCC +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSSFSPI*TYHQPP
Trigger: GGGTGGTTGGTGGTACGTGCAGATCGGGGAGAAGGA...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCCAGGCTGTCTGACTTaGCCTCGTTCTGCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSPGCLT*PRSASS
Trigger: AGAGCTCGCAGAACGAGGGCAAGTCAGACAGCCTGG...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGTCTTCACCGCTACGGTaGCCGAGGTCTTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLSSPLR*PRSCRS
Trigger: GCTTCGGCAAGACCTCGGGCACCGTAGCGGTGAAGA...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTACTGTTCCAGGATCATaGGCTCGGCGTTGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSTVPGS*ARRWCR
Trigger: CCGACACCAACGCCGAGCCCATGATCCTGGAACAGT...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTTCAGGTAGGACGCTaGTGCCCAACCCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSLQVGR*CPTLFA
Trigger: GGCAAAGAGGGTTGGGCACCAGCGTCCTACCTGAAG...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTGCTGGAACCCCAGGCTaGATTCTCTGCGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCAAGTPG*ILCAGE
Trigger: CTCCCCCGCGCAGAGAATCCAGCCTGGGGTTCCAGC...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGCCCCAGAGGAGCCTCTaGCAGACAGGGTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLPQRSL*QTGCLL
Trigger: CAGAAGACACCCTGTCTGCCAGAGGCTCCTCTGGGG...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCGCTCGGTTCAGGACTaGCTTTGGTCTCACGGATGG +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSRSVQD*LWSHGW
Trigger: CCATCCGTGAGACCAAAGCCAGTCCTGAACCGAGCG...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTATGGACACCCCCTCCTaGAAGCCAGCCGTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESMDTPS*KPAVSS
Trigger: CGAAGAGACGGCTGGCTTCCAGGAGGGGGTGTCCAT...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
3UTR CAA 72 bp ACTGTCCTCCACGTGCCCCGAGGAGGGCAACTCTCCTaGCCAGGCCAAGCCAGCACAGCAAGAGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: TVLHVPRGGQLS*PGQASTARGDS
Trigger: ACTGTCTCCTCTTGCTGTGCTGGCTTGGCCTGGCAAGGAGAGTTGCCCTCCTCGGGGCACGTGGAGGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 72 bp GGGAGAAACATGGCTTGGGGATCCAGGAGGTTAGGGTaGGGAGCTGAAGGCAGACCTGCCTGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRNMAWGSRRLG*GAEGRPAWEVG
Trigger: CCCCACCTCCCAGGCAGGTCTGCCTTCAGCTCCCAACCCTAACCTCCTGGATCCCCAAGCCATGTTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp ACTTCCAGAGGCAAGAAGCCAGCCACTGAAGTGGCTGAGCAGGGCAGGACCCAGTCAGATTTGGGGAGCTaGTCTGGGCCCTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: TSRGKKPATEVAEQGRTQSDLGS*SGPSEG
Trigger: CCCCTCAGAGGGCCCAGATCAGCTCCCCAAATCTGA...CTGGGTCCTGCCCTGCTCAGCCACTTCAGTGGCTGGCTTCTTGCCTCTGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGATTCATCTCGGGCTCTaGGTCAAAGCCAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVEIHLGL*VKAKGR
Trigger: CCTGCCTTTGGCTTTGACTCAGAGCCCGAGATGAAT...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTAAGACTCACCCACCTTaGAATGGGCCCGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESKTHPP*NGPVAG
Trigger: CCCTGCAACGGGCCCATTTCAAGGTGGGTGAGTCTT...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTAGGGTACCCAGCCCTTaGAGGGCTTCACCTCATCCA +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESRVPSP*RASPHP
Trigger: TGGATGAGGTGAAGCCCTTCAAGGGCTGGGTACCCT...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTGCGGGGACCCAACCTTaGTCTTCAGATGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSAGTQP*SSDVLT
Trigger: TGTGAGCACATCTGAAGAGCAAGGTTGGGTCCCCGC...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp TGGCAGCCAGGCGGGCGCACTAATGGAGCTGGCTCAATGCAGACATCTGAGGAGGCCGCAGGTGTGCCTTaGGTCTCTTGGACACTTCCC +
Preference number: 4 (lower is better)
Translates to: WQPGGRTNGAGSMQTSEEAAGVP*VSWTLP
Trigger: GGGAAGTGTCCAAGAGACGCAAGGCACACCTGCGGC...CTCCTCAGATGTCTGCATTGAGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTCCAGGCTGGATTCTCTaGGCGGGGGAGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCAPGWIL*AGEVLS
Trigger: GGACAAGACCTCCCCCGCGCAGAGAATCCAGCCTGG...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGTTGAAATGGGCCCGTTaGAGGGAAGAGGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLLKWAR*REEAGE
Trigger: CTCGCCTGCCTCTTCCCTGCAACGGGCCCATTTCAA...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGGAGACTCAGCCCAGCTaGACAACCACACTGATTTCC +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVEETQPS*TTTLIS
Trigger: GGAAATCAGTGTGGTTGTCCAGCTGGGCTGAGTCTC...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp ACTTCCAGAGGCAAGAAGCCAGCCACTGAAGTGGCTGAGCAGGGCAGGACCCAGTCATGGGCTCGGCGTTaGTGTCGGCACCTGTCACGT +
Preference number: 4 (lower is better)
Translates to: TSRGKKPATEVAEQGRTQSWARR*CRHLSR
Trigger: ACGTGACAGGTGCCGACACCAACGCCGAGCCCATGA...CTGGGTCCTGCCCTGCTCAGCCACTTCAGTGGCTGGCTTCTTGCCTCTGGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTAACAGAAGGGGGCTCTaGCGGCTTTGGCAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESNRRGL*RLWQLE
Trigger: TTCCAGCTGCCAAAGCCGCCAGAGCCCCCTTCTGTT...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTTCACCCACCTTGAAATaGGCCCGTTGCAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSSPTLK*ARCREE
Trigger: CTCTTCCCTGCAACGGGCCCATTTCAAGGTGGGTGA...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CTTCCAAGTTACCTTCCAGGCCTCTCAGTAACTGGTAGGGACACCCATGTCCTCCCCGGAGCTGGCCTGTaGGCCTCAGCTGGCGCCGTA +
Preference number: 4 (lower is better)
Translates to: LPSYLPGLSVTGRDTHVLPGAGL*ASAGAV
Trigger: TACGGCGCCAGCTGAGGCCCACAGGCCAGCTCCGGG...GAGGACATGGGTGTCCCTACCAGTTACTGAGAGGCCTGGAAGGTAACTTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTTCCCATTCCTTTTTaGGGACACACGGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSLPIPF*GHTGEW
Trigger: CCACTCCCCCGTGTGTCCCCAAAAAGGAATGGGAAG...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CAACGTGCAATGCGGGGATCCCGGGCCCAGGGCATTCCTGCTCTTCCCTTTCTCGCTGTGTCAGGTTGCTaGTTCTCCTCGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: QRAMRGSRAQGIPALPFLAVSGC*FSSATK
Trigger: CTTGGTGGCCGAGGAGAACCAGCAACCTGACACAGC...GAGAAAGGGAAGAGCAGGAATGCCCTGGGCCCGGGATCCCCGCATTGCACGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGTGGCCCTCTTGCTCTaGTTCACAGTGTTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESVALLL*FTVLSA
Trigger: GGCGCTCAACACTGTGAACCAGAGCAAGAGGGCCAC...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTGACACAAACACAGATTaGGGCCTGACGGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSDTNTD*GLTATC
Trigger: GCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTC...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGACCTCATCCAGGATCTaGCAGTACCACCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVETSSRI*QYHQPL
Trigger: CAATGGCTGGTGGTACTGCCAGATCCTGGATGAGGT...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
3UTR CAA 72 bp CGCTCTTCCTCCCATGTCTGTTGGAACCAGCAGCCCTaGGTCAGAGGAGATGCTGGCAGCTCAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: RSSSHVCWNQQP*VRGDAGSSATG
Trigger: GCCTGTGGCTGAGCTGCCAGCATCTCCTCTGACCAAGGGCTGCTGGTTCCAACAGACATGGGAGGAAGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp CCATCTTGTCCATCCCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAACTTCTTTTGGAGGGTTaGCATCCTCAGGCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: PSCPSPCLACRSSSSGSQLLLEG*HPQAVP
Trigger: AGGCACGGCCTGAGGATGTCAACCCTCCAAAAGAAG...TTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGGGATGGACAAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTTTTCGTTCTTCTCGATaGCATCTACCACCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSFRSSR*HLPPPR
Trigger: CCGGGGAGGTGGTAGATGTCATCGAGAAGAACGAAA...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTTGTAGGGCTGCACAGTaGCATACTTCTCTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSCRAAQ*HTSLLG
Trigger: GCCGAGAAGAGAAGTATGTCACTGTGCAGCCCTACA...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTTCTGGTTCACAGTGTTaGGCGCCTGCACACGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESSGSQC*APAHAS
Trigger: AGAAGCGTGTGCAGGCGCTCAACACTGTGAACCAGA...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGTCTGGTTCACAGTGTTaGGCGCCTGCACACGCTTCT +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLSGSQC*APAHAS
Trigger: AGAAGCGTGTGCAGGCGCTCAACACTGTGAACCAGA...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGCGGGGACCCAACCTTaGTCTTCAGATGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLAGTQP*SSDVLT
Trigger: TGTGAGCACATCTGAAGAGCAAGGTTGGGTCCCCGC...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTTTCTCTTCTCGGCTGTaGTGCCTGTTGACCATCCCG +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESFSSRL*CLLTIP
Trigger: CGGGATGGTCAACAGGCAGCACAGCCGAGAAGAGAA...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGAGCCGATCTCGTCTTTaGTCTGGCTGGTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLSRSRL*SGWCRA
Trigger: AGCCCTACACCAGCCAGAGCAAAGACGAGATCGGCT...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTCAGGTAGGACGCTGGTaGCCAACCCTCTTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCAQVGRW*PTLFAE
Trigger: CTCGGCAAAGAGGGTTGGGCACCAGCGTCCTACCTG...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp ACTTCCAGAGGCAAGAAGCCAGCCACTGAAGTGGCTGAGCAGGGCAGGACCCAGTCCTTCTCCCCGATCTaGACGTACCACCAACCACCC +
Preference number: 4 (lower is better)
Translates to: TSRGKKPATEVAEQGRTQSFSPI*TYHQPP
Trigger: GGGTGGTTGGTGGTACGTGCAGATCGGGGAGAAGGA...CTGGGTCCTGCCCTGCTCAGCCACTTCAGTGGCTGGCTTCTTGCCTCTGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp ACTTCCAGAGGCAAGAAGCCAGCCACTGAAGTGGCTGAGCAGGGCAGGACCCAGTTGAAATGGGCCCGTTaGAGGGAAGAGGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: TSRGKKPATEVAEQGRTQLKWAR*REEAGE
Trigger: CTCGCCTGCCTCTTCCCTGCAACGGGCCCATTTCAA...CTGGGTCCTGCCCTGCTCAGCCACTTCAGTGGCTGGCTTCTTGCCTCTGGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp TGGCAGCCAGGCGGGCGCACTAATGGAGCTGGCTCAATGCAGACATCTGAGGAGACTGTTCCAGGATCATaGGCTCGGCGTTGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: WQPGGRTNGAGSMQTSEETVPGS*ARRWCR
Trigger: CCGACACCAACGCCGAGCCCATGATCCTGGAACAGT...CTCCTCAGATGTCTGCATTGAGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTTCGGCAGGTCATCCTTaGCCTTCTTCAGGTAGGACG +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESSAGHP*PSSGRT
Trigger: CGTCCTACCTGAAGAAGGCCAAGGATGACCTGCCGA...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTCCAAGGCGCTGCCATTaGAGGCGTTGCAGAGGATCG +
Preference number: 4 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCAPRRCH*RRCRGS
Trigger: CGATCCTCTGCAACGCCTCCAATGGCAGCGCCTTGG...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp AAAGGGCTGAGCTCTTTGGAGACGCTGCCAAAGCCCAGAGCTGGTAGTTCTCCAGCTGGAACCCCAGGCTaGATTCTCTGCGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: KGLSSLETLPKPRAGSSPAGTPG*ILCAGE
Trigger: CTCCCCCGCGCAGAGAATCCAGCCTGGGGTTCCAGC...TGGAGAACTACCAGCTCTGGGCTTTGGCAGCGTCTCCAAAGAGCTCAGCCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTAGTACCACCAGCCATTaGGGTTCTTCTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSSTTSH*GSSPAP
Trigger: AGGTGCTGGAGAAGAACCCCAATGGCTGGTGGTACT...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGCTTGCTCTTCAGATGTaGTCACAAACCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLLALQM*SQTTSR
Trigger: GCGGCTGGTGGTTTGTGAGCACATCTGAAGAGCAAG...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp ACTTCCAGAGGCAAGAAGCCAGCCACTGAAGTGGCTGAGCAGGGCAGGACCCAGAGCCGATCTCGTCTTTaGTCTGGCTGGTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TSRGKKPATEVAEQGRTQSRSRL*SGWCRA
Trigger: AGCCCTACACCAGCCAGAGCAAAGACGAGATCGGCT...CTGGGTCCTGCCCTGCTCAGCCACTTCAGTGGCTGGCTTCTTGCCTCTGGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTGTTTTTCCCCAGTTCTaGCTGGGCATTCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSVFPQF*LGILLC
Trigger: GCAGAGAAGAATGCCCAGGCAGAACTGGGGAAAAAC...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGACTTGCCCTCGTTCTaGGAGCTCTTTCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLDLPSF*ELFPVS
Trigger: AGACACAGGAAAGAGCTCGCAGAACGAGGGCAAGTC...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp CTGCCCTCTTTCCCTCTTGGGCAGGAACCTGAACACTTTGTTTCACCGAGCCGGGCCACGTCGCGGATGTaGCTTCTCCGGAAGAGGATC +
Preference number: 4 (lower is better)
Translates to: LPSFPLGQEPEHFVSPSRATSRM*LLRKRI
Trigger: GATCCTCTTCCGGAGAAGCCACATCCGCGACGTGGC...CCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTGCCCAAGAGGGAAAGAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTGGTGTCTTCTGTGTATaGCCTGAAGCCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSGVFCV*PEALIL
Trigger: GAGAATGAGGGCTTCAGGCCATACACAGAAGACACC...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp TGTCACCACCACGGGCTTTTGACAGAGGAGGCTAGTGGGTTGCATCCACCTGTGAGGGGATGGGTGGGGTaGCCCTCTTGCTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: CHHHGLLTEEASGLHPPVRGWVG*PSCSGS
Trigger: TGAACCAGAGCAAGAGGGCCACCCCACCCATCCCCT...CACAGGTGGATGCAACCCACTAGCCTCCTCTGTCAAAAGCCCGTGGTGGTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTTCTGTGTATGGCCTaGAGCCCTCATTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSLLCMA*SPHSHR
Trigger: TCTATGAGAATGAGGGCTTCAGGCCATACACAGAAG...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp TGTCACCACCACGGGCTTTTGACAGAGGAGGCTAGTGGGTTGCATCCACCTGTGCCAGGCTGTCTGACTTaGCCTCGTTCTGCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CHHHGLLTEEASGLHPPVPGCLT*PRSASS
Trigger: AGAGCTCGCAGAACGAGGGCAAGTCAGACAGCCTGG...CACAGGTGGATGCAACCCACTAGCCTCCTCTGTCAAAAGCCCGTGGTGGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGTCTGAGGGGCGATCCTaGCCACAGCTGGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRSEGRS*PQLGSP
Trigger: AGGGCTCCCCAGCTGTGGCCAGGATCGCCCCTCAGA...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp CTGCCCTCTTTCCCTCTTGGGCAGGAACCTGAACACTTTGTTTCACCGAGCCGGAACAGAAGGGGGCTCTaGCGGCTTTGGCAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPSFPLGQEPEHFVSPSRNRRGL*RLWQLE
Trigger: TTCCAGCTGCCAAAGCCGCCAGAGCCCCCTTCTGTT...CCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTGCCCAAGAGGGAAAGAGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTCCTCATTCTCATAGATaGTCTCCTCTTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESPHSHR*SPLPGP
Trigger: TGGCCCTGGAAGAGGAGACCATCTATGAGAATGAGG...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGTCACCATTGTTCTTaGACAAGGAGGACGAGGATG +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESGHHCS*TRRTRM
Trigger: CATCCTCGTCCTCCTTGTCCAAGAACAATGGTGACC...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTCTTCCCATTCCTTTTTaGGGACACACGGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCALPIPF*GHTGEW
Trigger: CCACTCCCCCGTGTGTCCCCAAAAAGGAATGGGAAG...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTACAGGTTGTTGTCCTTaGGTGGCGGAGACACAAACA +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESTGCCP*VAETQT
Trigger: TGTTTGTGTCTCCGCCACCCAAGGACAACAACCTGT...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGACAGGTTGTTGTCCTTaGGTGGCGGAGACACAAACA +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLTGCCP*VAETQT
Trigger: TGTTTGTGTCTCCGCCACCCAAGGACAACAACCTGT...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTCTTCTGTGTATGGCCTaGAGCCCTCATTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESLLCMA*SPHSHR
Trigger: TCTATGAGAATGAGGGCTTCAGGCCATACACAGAAG...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp TTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCCAAACTCCCTGCTAAGGTGCCTTTTCCAGGCTGTCTaGCTTGCCCTCGTTCTGCGA +
Preference number: 4 (lower is better)
Translates to: FTEPGTWLYPVPNSLLRCLFQAV*LALVLR
Trigger: TCGCAGAACGAGGGCAAGTCAGACAGCCTGGAAAAG...GCACCTTAGCAGGGAGTTTGGAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp ATCTTTTCCATGTCTTCATCTTGGTGCCCGGGACAATGGCCTGCCTGGGCTGCTCCGAGTCGTCTCGTGTaGCATTCTGGGCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: IFSMSSSWCPGQWPAWAAPSRLV*HSGPPS
Trigger: ACTTGGAGGCCCAGAATGGCACACGAGACGACTCGG...AGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp TTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGATCGGTGCCCGAGGTCTTaGCGAAGCCCCCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FLQSTSTNVPTLWSGDPDRCPRS*RSPREA
Trigger: AGCCTCCCGGGGGCTTCGGCAAGACCTCGGGCACCG...ATCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp CAGGAACCTGAACACTTTGTTTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCTCTTCACCGCTACGGTaGCCGAGGTCTTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: QEPEHFVSPSRGLGFTQFSSPLR*PRSCRS
Trigger: GCTTCGGCAAGACCTCGGGCACCGTAGCGGTGAAGA...GAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp CTTCCAAGTTACCTTCCAGGCCTCTCAGTAACTGGTAGGGACACCCATGTCCTCCCACGTCCACCACGGTaGCATCTTGCACGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LPSYLPGLSVTGRDTHVLPRPPR*HLARSR
Trigger: CCTACTGCGTGCAAGATGCCACCGTGGTGGACGTGG...GAGGACATGGGTGTCCCTACCAGTTACTGAGAGGCCTGGAAGGTAACTTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp ATCTTTTCCATGTCTTCATCTTGGTGCCCGGGACAATGGCCTGCCTGGGCTGCTCTTCAGGTAGGACGCTaGTGCCCAACCCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: IFSMSSSWCPGQWPAWAALQVGR*CPTLFA
Trigger: GGCAAAGAGGGTTGGGCACCAGCGTCCTACCTGAAG...AGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTAGGAGAAGGAGATGTTaGACTGGTTTTTCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSRRRRC*TGFSPV
Trigger: AACTGGGGAAAAACCAGTCCAACATCTCCTTCTCCT...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp TGGCAGCCAGGCGGGCGCACTAATGGAGCTGGCTCAATGCAGACATCTGAGGAGGGTCACCATTGTTCTTaGACAAGGAGGACGAGGATG +
Preference number: 4 (lower is better)
Translates to: WQPGGRTNGAGSMQTSEEGHHCS*TRRTRM
Trigger: CATCCTCGTCCTCCTTGTCCAAGAACAATGGTGACC...CTCCTCAGATGTCTGCATTGAGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp GCAGGCTGCCCTCTTTCCCTCTTGGGCAGGAACCTGAACACTTTGTTTCACCGAGTGGCCCTCTTGCTCTaGTTCACAGTGTTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: AGCPLSLLGRNLNTLFHRVALLL*FTVLSA
Trigger: GGCGCTCAACACTGTGAACCAGAGCAAGAGGGCCAC...TCGGTGAAACAAAGTGTTCAGGTTCCTGCCCAAGAGGGAAAGAGGGCAGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp TTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCCAAACTCCCTGCTAAGGTGCGACACAAACACAGATTaGGGCCTGACGGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: FTEPGTWLYPVPNSLLRCDTNTD*GLTATC
Trigger: GCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTC...GCACCTTAGCAGGGAGTTTGGAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTACCTCATCCAGGATCTaGCAGTACCACCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCATSSRI*QYHQPL
Trigger: CAATGGCTGGTGGTACTGCCAGATCCTGGATGAGGT...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
3UTR CAA 72 bp CACCACCACGGGCTTTTGACAGAGGAGGCTAGTGGGTaGCATCCACCTGTGGGAGAAACATGGCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: HHHGLLTEEASG*HPPVGETWLGD
Trigger: ATCCCCAAGCCATGTTTCTCCCACAGGTGGATGCAACCCACTAGCCTCCTCTGTCAAAAGCCCGTGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp TTTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGAGGCTGTGCTGCCTGTTaGCCATCCCGCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: FPSIYKHQCTYFVVWGPRGCAAC*PSRPGS
Trigger: GGACCCTGGGCGGGATGGTCAACAGGCAGCACAGCC...TCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp CAGGAACCTGAACACTTTGTTTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCAGGGTACCCAGCCCTTaGAGGGCTTCACCTCATCCA +
Preference number: 4 (lower is better)
Translates to: QEPEHFVSPSRGLGFTQFRVPSP*RASPHP
Trigger: TGGATGAGGTGAAGCCCTTCAAGGGCTGGGTACCCT...GAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGTCTTCTCGGCTGTGCTaGCTGTTGACCATCCCGCCC +
Preference number: 4 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRSSRLC*LLTIPP
Trigger: GGGCGGGATGGTCAACAGGCAGCACAGCCGAGAAGA...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp TGTCACCACCACGGGCTTTTGACAGAGGAGGCTAGTGGGTTGCATCCACCTGTGGACTTGCCCTCGTTCTaGGAGCTCTTTCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: CHHHGLLTEEASGLHPPVDLPSF*ELFPVS
Trigger: AGACACAGGAAAGAGCTCGCAGAACGAGGGCAAGTC...CACAGGTGGATGCAACCCACTAGCCTCCTCTGTCAAAAGCCCGTGGTGGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp GAAATGTCAACCACTGACTCACGACCCAAAGCAGACAGAGGACTGTTTCCACTCCTTCGAGGGGATGGGTaGGGTGGCCCTCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: EMSTTDSRPKADRGLFPLLRGDG*GGPLAL
Trigger: CAGAGCAAGAGGGCCACCCCACCCATCCCCTCGAAG...GAGTGGAAACAGTCCTCTGTCTGCTTTGGGTCGTGAGTCAGTGGTTGACATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTTCCTTGAGGTTGTTGTaGATAAACTGGGACTTCTCT +
Preference number: 4 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSSLRLL*INWDFS
Trigger: AGAGAAGTCCCAGTTTATCCACAACAACCTCAAGGA...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
3UTR CAA 72 bp TGCCCTCTTTCCCTCTTGGGCAGGAACCTGAACACTTaGTTTCACCGAGCCGGGGACTTGGCTTTACCCAGT +
Preference number: 4 (lower is better)
Translates to: CPLSLLGRNLNT*FHRAGDLALPS
Trigger: ACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTGCCCAAGAGGGAAAGAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 72 bp GGAGAGGGTGGCACCTGCCAATCCCTTGCAGCCAGGTaGGGATCAAGGCTTTGGAAAGACCCTTTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: GEGGTCQSLAAR*GSRLWKDPFLQ
Trigger: TTGAAGGAAAGGGTCTTTCCAAAGCCTTGATCCCAACCTGGCTGCAAGGGATTGGCAGGTGCCACCCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 72 bp GAATCCGGGATGGGACTGGGCCCGCAGACCCAAAGATaGGCGTATGACTTGCAGCACCTCTTCCTTAAGACA +
Preference number: 4 (lower is better)
Translates to: ESGMGLGPQTQR*AYDLQHLFLKT
Trigger: TGTCTTAAGGAAGAGGTGCTGCAAGTCATACGCCAATCTTTGGGTCTGCGGGCCCAGTCCCATCCCGGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGAAGACTCACCCACCTTaGAATGGGCCCGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRKTHPP*NGPVAG
Trigger: CCCTGCAACGGGCCCATTTCAAGGTGGGTGAGTCTT...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp CAGGAACCTGAACACTTTGTTTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCTTCTCTTCTCGGCTGTaGTGCCTGTTGACCATCCCG +
Preference number: 4 (lower is better)
Translates to: QEPEHFVSPSRGLGFTQFFSSRL*CLLTIP
Trigger: CGGGATGGTCAACAGGCAGCACAGCCGAGAAGAGAA...GAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp CCATCTTGTCCATCCCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGAAGAGGATCTTGCCTaGAAGAAAGGGAATAATCCT +
Preference number: 4 (lower is better)
Translates to: PSCPSPCLACRSSSSGSQEEDLA*KKGNNP
Trigger: AGGATTATTCCCTTTCTTCCAGGCAAGATCCTCTTC...TTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGGGATGGACAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp CTGCCCTCTTTCCCTCTTGGGCAGGAACCTGAACACTTTGTTTCACCGAGCCGGGGTGTCTTCTGTGTATaGCCTGAAGCCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: LPSFPLGQEPEHFVSPSRGVFCV*PEALIL
Trigger: GAGAATGAGGGCTTCAGGCCATACACAGAAGACACC...CCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTGCCCAAGAGGGAAAGAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGTTGTTGTGGATAAACTaGGACTTCTCTATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLLLWIN*DFSMGL
Trigger: CAAGCCCATAGAGAAGTCCCAGTTTATCCACAACAA...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR TCA 90 bp CAGGAACCTGAACACTTTGTTTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCTTTCGTTCTTCTCGATaGCATCTACCACCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: QEPEHFVSPSRGLGFTQFFRSSR*HLPPPR
Trigger: CCGGGGAGGTGGTAGATGTCATCGAGAAGAACGAAA...GAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTCATTCTTCTCTGCTTTaGGCTTTAGGAGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCAHSSLL*ALGVMR
Trigger: CCTCATCACTCCTAAAGCTCAAAGCAGAGAAGAATG...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp CAACGTGCAATGCGGGGATCCCGGGCCCAGGGCATTCCTGCTCTTCCCTTTCTCATTTCCTCTTGGAACTaGCATAGTCTTCTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: QRAMRGSRAQGIPALPFLISSWN*HSLLLE
Trigger: CTCCAAAAGAAGACTATGGCAGTTCCAAGAGGAAAT...GAGAAAGGGAAGAGCAGGAATGCCCTGGGCCCGGGATCCCCGCATTGCACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTCTCCTTATCCCCAGATaGCTTCTTGTTGAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCALLIPR*LLVEKV
Trigger: AACCTTCTCAACAAGAAGGCATCTGGGGATAAGGAG...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR GCA 90 bp TTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGATCGGGGCTGGGCGGGATaGTTGTCACCTGAACCTCTG +
Preference number: 4 (lower is better)
Translates to: FLQSTSTNVPTLWSGDPDRGWAG*LSPEPL
Trigger: CAGAGGTTCAGGTGACAAGCATCCCGCCCAGCCCCG...ATCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp TGCGTCTTCGGGCATTATATAAACCTCAATAATGACCTCAGAAGGGCTCATTCTGCCTTCTCCAGCACGTaGACCTCGGCGCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: CVFGHYINLNNDLRRAHSAFSST*TSAPSG
Trigger: CCCCGAAGGCGCCGAGGTGCACGTGCTGGAGAAGGC...AGAATGAGCCCTTCTGAGGTCATTATTGAGGTTTATATAATGCCCGAAGACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp GAAATGTCAACCACTGACTCACGACCCAAAGCAGACAGAGGACTGTTTCCACTCCTGTCACGTCCTTCTTaGGAGACTCAGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EMSTTDSRPKADRGLFPLLSRPS*ETQPSW
Trigger: CCAGCTGGGCTGAGTCTCCCAAGAAGGACGTGACAG...GAGTGGAAACAGTCCTCTGTCTGCTTTGGGTCGTGAGTCAGTGGTTGACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGCTTGTTTCTTATAGTTaGACACCACCACGTACTGTT +
Preference number: 4 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLLVSYS*TPPRTV
Trigger: AACAGTACGTGGTGGTGTCCAACTATAAGAAACAAG...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGTCGGCAGGTCATCCTTaGCCTTCTTCAGGTAGGACG +
Preference number: 4 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRSAGHP*PSSGRT
Trigger: CGTCCTACCTGAAGAAGGCCAAGGATGACCTGCCGA...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGTCACCCACCTTGAAATaGGCCCGTTGCAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRSPTLK*ARCREE
Trigger: CTCTTCCCTGCAACGGGCCCATTTCAAGGTGGGTGA...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 72 bp GCCAGGCCAAGCCAGCACAGCAAGAGGAGACAGTCCTaGTTGGCACCTGGGAACTCTTTTAACTACCAAACA +
Preference number: 4 (lower is better)
Translates to: ARPSQHSKRRQS*LAPGNSFNYQT
Trigger: TGTTTGGTAGTTAAAAGAGTTCCCAGGTGCCAACAAGGACTGTCTCCTCTTGCTGTGCTGGCTTGGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 72 bp AGGAACCTGAACACTTTGTTTCACCGAGCCGGGGACTaGGCTTTACCCAGTTCCAAACTCCCTGCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: RNLNTLFHRAGD*ALPSSKLPAKV
Trigger: CACCTTAGCAGGGAGTTTGGAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGATTCATCTCGGGCTCTaGGTCAAAGCCAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRIHLGL*VKAKGR
Trigger: CCTGCCTTTGGCTTTGACTCAGAGCCCGAGATGAAT...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp GAAATGTCAACCACTGACTCACGACCCAAAGCAGACAGAGGACTGTTTCCACTCGACATCCTCAGGCCGTaGCTCAAAGAACCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: EMSTTDSRPKADRGLFPLDILRP*LKEPED
Trigger: GTCTTCCGGTTCTTTGAGGCACGGCCTGAGGATGTC...GAGTGGAAACAGTCCTCTGTCTGCTTTGGGTCGTGAGTCAGTGGTTGACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp ATCTTTTCCATGTCTTCATCTTGGTGCCCGGGACAATGGCCTGCCTGGGCTGCTTGCTTCGGATCCTTCTaGCCACCTTCAATAGGAAAC +
Preference number: 4 (lower is better)
Translates to: IFSMSSSWCPGQWPAWAACFGSF*PPSIGN
Trigger: GTTTCCTATTGAAGGTGGCCAGAAGGATCCGAAGCA...AGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTACTGGAATTCAGCAATaGTGTAGTATTCTACCTCAA +
Preference number: 4 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESTGIQQ*CSILPQ
Trigger: TTGAGGTAGAATACTACACCATTGCTGAATTCCAGT...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp TTTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGACCCCAGAGGAGCCTCTaGCAGACAGGGTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FPSIYKHQCTYFVVWGPRPQRSL*QTGCLL
Trigger: CAGAAGACACCCTGTCTGCCAGAGGCTCCTCTGGGG...TCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTCTTGTTTCTTATAGTTaGACACCACCACGTACTGTT +
Preference number: 4 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCALVSYS*TPPRTV
Trigger: AACAGTACGTGGTGGTGTCCAACTATAAGAAACAAG...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CCA 90 bp TGGCAGCCAGGCGGGCGCACTAATGGAGCTGGCTCAATGCAGACATCTGAGGAGACTGGAATTCAGCAATaGTGTAGTATTCTACCTCAA +
Preference number: 4 (lower is better)
Translates to: WQPGGRTNGAGSMQTSEETGIQQ*CSILPQ
Trigger: TTGAGGTAGAATACTACACCATTGCTGAATTCCAGT...CTCCTCAGATGTCTGCATTGAGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp TTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCCAAACTCCCTGCTAAGGTGCTCCTTGAGGTTGTTGTaGATAAACTGGGACTTCTCT +
Preference number: 4 (lower is better)
Translates to: FTEPGTWLYPVPNSLLRCSLRLL*INWDFS
Trigger: AGAGAAGTCCCAGTTTATCCACAACAACCTCAAGGA...GCACCTTAGCAGGGAGTTTGGAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 72 bp TTCCATACTCAACAGTATCTTTTCCATGTCTTCATCTaGGTGCCCGGGACAATGGCCTGCCTGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FHTQQYLFHVFI*VPGTMACLGCF
Trigger: GAAGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGATACTGTTGAGTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 72 bp GGACTGGGCCCGCAGACCCAAAGATTGGCGTATGACTaGCAGCACCTCTTCCTTAAGACAATGATACTGGAA +
Preference number: 4 (lower is better)
Translates to: GLGPQTQRLAYD*QHLFLKTMILE
Trigger: TTCCAGTATCATTGTCTTAAGGAAGAGGTGCTGCAAGTCATACGCCAATCTTTGGGTCTGCGGGCCCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp TACTCATTCTCTCTAACCCCATGCTATTCAAGTGGAGAATTACCACCAGTCTCTGACTTCGTCACACTGTaGAATGTGGGGCGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: YSFSLTPCYSSGELPPVSDFVTL*NVGRQP
Trigger: CGGCTGCCGCCCCACATTTCACAGTGTGACGAAGTC...AGAGACTGGTGGTAATTCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 72 bp TCGACCATGTCTGGGAAGGCCTGGTATGCACCCTTCTaGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: STMSGKAWYAPF*FQVFFVLAGFV
Trigger: CACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGGTGCATACCAGGCCTTCCCAGACATGGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 72 bp AGTGTAGCCAGGCCAGCTACTGGCAAAGGATACGGTTaGAAGACTTTTCCCTCCACCCCTGTGATACAAGAA +
Preference number: 4 (lower is better)
Translates to: SVARPATGKGYG*KTFPSTPVIQE
Trigger: TTCTTGTATCACAGGGGTGGAGGGAAAAGTCTTCAAACCGTATCCTTTGCCAGTAGCTGGCCTGGCTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
3UTR CAA 72 bp CTGCCAATCCCTTGCAGCCAGGTTGGGATCAAGGCTTaGGAAAGACCCTTTCCTTCAATCTACAAGCACCAA +
Preference number: 4 (lower is better)
Translates to: LPIPCSQVGIKA*ERPFPSIYKHQ
Trigger: TTGGTGCTTGTAGATTGAAGGAAAGGGTCTTTCCAAAGCCTTGATCCCAACCTGGCTGCAAGGGATTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp TTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGATGCTGGACAACCACACTaGTTTCCTCTTGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: FLQSTSTNVPTLWSGDPDAGQPH*FPLGTA
Trigger: GGCAGTTCCAAGAGGAAATCAGTGTGGTTGTCCAGC...ATCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp CCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTGCTGTGCCCTGATTCCAGAAGCTGCATCTaGAGGTCGAAGAACTTGCTG +
Preference number: 4 (lower is better)
Translates to: PFLFQVFFVLAGFVLCPDSRSCI*RSKNLL
Trigger: CAGCAAGTTCTTCGACCTGCAGATGCAGCTTCTGGA...ATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp CCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTGCTGTGCCCTGATGTTTTTCCCCAGTTCTaGCTGGGCATTCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PFLFQVFFVLAGFVLCPDVFPQF*LGILLC
Trigger: GCAGAGAAGAATGCCCAGGCAGAACTGGGGAAAAAC...ATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGTTGTTGTGGATAAACTaGGACTTCTCTATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRLLWIN*DFSMGL
Trigger: CAAGCCCATAGAGAAGTCCCAGTTTATCCACAACAA...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp TGCGTCTTCGGGCATTATATAAACCTCAATAATGACCTCAGAAGGGCTCATTCTTGTAGGGCTGCACAGTaGCATACTTCTCTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: CVFGHYINLNNDLRRAHSCRAAQ*HTSLLG
Trigger: GCCGAGAAGAGAAGTATGTCACTGTGCAGCCCTACA...AGAATGAGCCCTTCTGAGGTCATTATTGAGGTTTATATAATGCCCGAAGACGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp CCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTGCTGTGCCCTGATAAGGGAATAATCCTTTaGTTCGGATCCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PFLFQVFFVLAGFVLCPDKGIIL*FGSFWP
Trigger: TGGCCAGAAGGATCCGAAGCAAAGGATTATTCCCTT...ATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp GAAATGTCAACCACTGACTCACGACCCAAAGCAGACAGAGGACTGTTTCCACTCTGCAGTATTCATCGATaGGCTTTAGTCTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: EMSTTDSRPKADRGLFPLCSIHR*ALVSSQ
Trigger: CTGTGAAGAGACTAAAGCCCATCGATGAATACTGCA...GAGTGGAAACAGTCCTCTGTCTGCTTTGGGTCGTGAGTCAGTGGTTGACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp TTTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGAGCCATAGTCTTCTTTTaGAGGGTTGACATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FPSIYKHQCTYFVVWGPRAIVFF*RVDILR
Trigger: CCTGAGGATGTCAACCCTCCAAAAGAAGACTATGGC...TCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp CCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTGCTGTGCCCTGATAGGAGAAGGAGATGTTaGACTGGTTTTTCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: PFLFQVFFVLAGFVLCPDRRRRC*TGFSPV
Trigger: AACTGGGGAAAAACCAGTCCAACATCTCCTTCTCCT...ATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp TACTCATTCTCTCTAACCCCATGCTATTCAAGTGGAGAATTACCACCAGTCTCTAGTACCACCAGCCATTaGGGTTCTTCTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: YSFSLTPCYSSGELPPVSSTTSH*GSSPAP
Trigger: AGGTGCTGGAGAAGAACCCCAATGGCTGGTGGTACT...AGAGACTGGTGGTAATTCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR TCA 90 bp TTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGATCATTCTTCTCTGCTTTaGGCTTTAGGAGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: FLQSTSTNVPTLWSGDPDHSSLL*ALGVMR
Trigger: CCTCATCACTCCTAAAGCTCAAAGCAGAGAAGAATG...ATCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR GCA 90 bp TTTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGACTCCTTATCCCCAGATaGCTTCTTGTTGAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: FPSIYKHQCTYFVVWGPRLLIPR*LLVEKV
Trigger: AACCTTCTCAACAAGAAGGCATCTGGGGATAAGGAG...TCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CCA 90 bp TGCGTCTTCGGGCATTATATAAACCTCAATAATGACCTCAGAAGGGCTCATTCTCCTCATTCTCATAGATaGTCTCCTCTTCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CVFGHYINLNNDLRRAHSPHSHR*SPLPGP
Trigger: TGGCCCTGGAAGAGGAGACCATCTATGAGAATGAGG...AGAATGAGCCCTTCTGAGGTCATTATTGAGGTTTATATAATGCCCGAAGACGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS CCA 90 bp GGGATGCCTTTGCGCTGGGTAGGCAGCAGGGGCGATTCTGAGCCCTaGCTGGCAGCCCGCTCGGCCAGGCGGCCCTTGGCCTCAGCGGCT +
Preference number: 5 (lower is better)
Translates to: GMPLRWVGSRGDSEP*LAARSARRPLASAA
Trigger: AGCCGCTGAGGCCAAGGGCCGCCTGGCCGAGCGGGCTGCCAGCCAGGGCTCAGAATCGCCCCTGCTGCCTACCCAGCGCAAAGGCATCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 90 bp GGAGACAGGGATGCCTTTGCGCTGGGTAGGCAGCAGGGGCGATTCTaGGCCCTGGCTGGCAGCCCGCTCGGCCAGGCGGCCCTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: GDRDAFALGRQQGRF*ALAGSPLGQAALGL
Trigger: GAGGCCAAGGGCCGCCTGGCCGAGCGGGCTGCCAGCCAGGGCTCAGAATCGCCCCTGCTGCCTACCCAGCGCAAAGGCATCCCTGTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 90 bp GCTGGCAGCCCGCTCGGCCAGGCGGCCCTTGGCCTCAGCGGCTGCTaGCCGTGCGGTGCTAAAGGAGGAGTTCCTGCGGACACCTCTGAG +
Preference number: 5 (lower is better)
Translates to: AGSPLGQAALGLSGC*PCGAKGGVPADTSE
Trigger: CTCAGAGGTGTCCGCAGGAACTCCTCCTTTAGCACCGCACGGTCAGCAGCCGCTGAGGCCAAGGGCCGCCTGGCCGAGCGGGCTGCCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp GCCCGAGGTCTTGCCGAAGCCCCCGGGAGGCTTCGAGGGGATGGGTaGGGTGGCCCTCTTGCTCTGGTTCACAGTGTTGAGCGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: ARGLAEAPGRLRGDG*GGPLALVHSVERLH
Trigger: GTGCAGGCGCTCAACACTGTGAACCAGAGCAAGAGGGCCACCCCACCCATCCCCTCGAAGCCTCCCGGGGGCTTCGGCAAGACCTCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp TCTATGGGCTTGGGACGCACGGGGGAGACAGGGATGCCTTTGCGCTaGGTAGGCAGCAGGGGCGATTCTGAGCCCTGGCTGGCAGCCCGC +
Preference number: 5 (lower is better)
Translates to: SMGLGRTGETGMPLR*VGSRGDSEPWLAAR
Trigger: GCGGGCTGCCAGCCAGGGCTCAGAATCGCCCCTGCTGCCTACCCAGCGCAAAGGCATCCCTGTCTCCCCCGTGCGTCCCAAGCCCATAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CAACGTGCAATGCGGGGATCCCGGGCCCAGGGCATTCCTGCTCTTCCCTTTCTCACGGTGCCCGAGGTCTaGCCGAAGCCCCCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: QRAMRGSRAQGIPALPFLTVPEV*PKPPGG
Trigger: GCCTCCCGGGGGCTTCGGCAAGACCTCGGGCACCGT...GAGAAAGGGAAGAGCAGGAATGCCCTGGGCCCGGGATCCCCGCATTGCACGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS CCA 90 bp CACGTACTGTTCCAGGATCATGGGCTCGGCGTTGGTGTCGGCACCTaGCGAGGGCAGAAAGCACGCGGTGAGCCAGCGGCCGGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: HVLFQDHGLGVGVGT*RGQKARGEPAAGCS
Trigger: GCTACAGCCGGCCGCTGGCTCACCGCGTGCTTTCTGCCCTCGCCAGGTGCCGACACCAACGCCGAGCCCATGATCCTGGAACAGTACGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGGGGCTCTGGCGGCTTaGGCAGCTGGAACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLGALAA*AAGTPG
Trigger: GCCTGGGGTTCCAGCTGCCAAAGCCGCCAGAGCCCC...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTGGGCCTGACGGCCACTaGCCGGACCCCGTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSGPDGH*PDPVPH
Trigger: ATGAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCCC...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGCGGCTGTGCTGCCTGTaGACCATCCCGCCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLRLCCL*TIPPRV
Trigger: GACCCTGGGCGGGATGGTCAACAGGCAGCACAGCCG...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp TGGCAGCCAGGCGGGCGCACTAATGGAGCTGGCTCAATGCAGACATCTGAGGAGGGGGCTCTGGCGGCTTaGGCAGCTGGAACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: WQPGGRTNGAGSMQTSEEGALAA*AAGTPG
Trigger: GCCTGGGGTTCCAGCTGCCAAAGCCGCCAGAGCCCC...CTCCTCAGATGTCTGCATTGAGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTACGGTGCCCGAGGTCTaGCCGAAGCCCCCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCATVPEV*PKPPGG
Trigger: GCCTCCCGGGGGCTTCGGCAAGACCTCGGGCACCGT...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS TCA 90 bp CAGGTGGCGGCACCTTGGGCCGCGTCAGAGTGCTGGTTCGGCGGCTaGGGTTGGGTTTCTTGCGCTTGTCAATGTATGAGGCTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: QVAAPWAASECWFGG*GWVSCACQCMRLGP
Trigger: GGGCCCCAGCCTCATACATTGACAAGCGCAAGAAACCCAACCTCAGCCGCCGAACCAGCACTCTGACGCGGCCCAAGGTGCCGCCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS GCA 90 bp GACCATCCCGCCCAGGGTCCACCGGCGATCCAGGCGCCGCAGGTGTaGCTTGCGTCTCTTGGACACTTCCCCAGTCTTGGAGGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: DHPAQGPPAIQAPQV*LASLGHFPSLGGVD
Trigger: ATCAACACCTCCAAGACTGGGGAAGTGTCCAAGAGACGCAAGGCACACCTGCGGCGCCTGGATCGCCGGTGGACCCTGGGCGGGATGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS GCA 90 bp AGGGCCACGTCCTCAGAAGACTCACCCACCTTGAAATGGGCCCGTTaGAGGGAAGAGGCAGGCGAGATCCTTCGGGGCTGGGCGGGATGC +
Preference number: 5 (lower is better)
Translates to: RATSSEDSPTLKWAR*REEAGEILRGWAGC
Trigger: GCATCCCGCCCAGCCCCGAAGGATCTCGCCTGCCTCTTCCCTGCAACGGGCCCATTTCAAGGTGGGTGAGTCTTCTGAGGACGTGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp CATCTTCTCCTGGCTTTGAGACTCCGCTCGGTTCAGGACTGGCTTTaGTCTCACGGATGGCTTGGCTCGGGCGCAGGAGGCCAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: HLLLALRLRSVQDWL*SHGWLGSGAGGQPG
Trigger: GCCGGGCTGGCCTCCTGCGCCCGAGCCAAGCCATCCGTGAGACCAAAGCCAGTCCTGAACCGAGCGGAGTCTCAAAGCCAGGAGAAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp ACTTCCAGAGGCAAGAAGCCAGCCACTGAAGTGGCTGAGCAGGGCAGGACCCAGGGGCCTGACGGCCACTaGCCGGACCCCGTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: TSRGKKPATEVAEQGRTQGPDGH*PDPVPH
Trigger: ATGAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCCC...CTGGGTCCTGCCCTGCTCAGCCACTTCAGTGGCTGGCTTCTTGCCTCTGGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS GCA 90 bp CCAAACCTCACGTACCACCACCCACTTTCCGCCTTCTCCAGCACGTaGACCTCGGCGCCTTCGGGGAAGCTGATCTCCGAGTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: PNLTYHHPLSAFSST*TSAPSGKLISESWT
Trigger: GGTCCAGGACTCGGAGATCAGCTTCCCCGAAGGCGCCGAGGTGCACGTGCTGGAGAAGGCGGAAAGTGGGTGGTGGTACGTGAGGTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS GCA 90 bp TTGGGTGGCGGAGACACAAACACAGATTGGGGCCTGACGGCCACTTaGCGGACCCCGTTCCTCATCTTCACCGCTACGGTGCCCGAGGTC +
Preference number: 5 (lower is better)
Translates to: LGGGDTNTDWGLTAT*RTPFLIFTATVPEV
Trigger: GACCTCGGGCACCGTAGCGGTGAAGATGAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp CCACCGGACCCGCCAGGTTCTTCTTCCGGGTCGGCAGGTCATCCTTaGCCTTCTTCAGGTAGGACGCTGGTGCCCAACCCTCTTTGCCGA +
Preference number: 5 (lower is better)
Translates to: PPDPPGSSSGSAGHP*PSSGRTLVPNPLCR
Trigger: TCGGCAAAGAGGGTTGGGCACCAGCGTCCTACCTGAAGAAGGCCAAGGATGACCTGCCGACCCGGAAGAAGAACCTGGCGGGTCCGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp CAGCTGGGGAGCCCTGGGCTAGCTTGGATGTGGTCCTCTCGGGAATaGCCAAGGCGCTGCCATTGGAGGCGTTGCAGAGGATCGGTAAGC +
Preference number: 5 (lower is better)
Translates to: QLGSPGLAWMWSSRE*PRRCHWRRCRGSVS
Trigger: GCTTACCGATCCTCTGCAACGCCTCCAATGGCAGCGCCTTGGCCATTCCCGAGAGGACCACATCCAAGCTAGCCCAGGGCTCCCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp GAGACTCCGCTCGGTTCAGGACTGGCTTTGGTCTCACGGATGGCTTaGCTCGGGCGCAGGAGGCCAGCCCGGCCTTCACATCAGGATCTT +
Preference number: 5 (lower is better)
Translates to: ETPLGSGLALVSRMA*LGRRRPARPSHQDL
Trigger: AAGATCCTGATGTGAAGGCCGGGCTGGCCTCCTGCGCCCGAGCCAAGCCATCCGTGAGACCAAAGCCAGTCCTGAACCGAGCGGAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CAACGTGCAATGCGGGGATCCCGGGCCCAGGGCATTCCTGCTCTTCCCTTTCTCCGCCGCAGGTGTGCCTaGCGTCTCTTGGACACTTCC +
Preference number: 5 (lower is better)
Translates to: QRAMRGSRAQGIPALPFLRRRCA*RLLDTS
Trigger: GGAAGTGTCCAAGAGACGCAAGGCACACCTGCGGCG...GAGAAAGGGAAGAGCAGGAATGCCCTGGGCCCGGGATCCCCGCATTGCACGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGCGCCGCAGGTGTGCCTaGCGTCTCTTGGACACTTCC +
Preference number: 5 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLRRRCA*RLLDTS
Trigger: GGAAGTGTCCAAGAGACGCAAGGCACACCTGCGGCG...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGCCAAGGCGCTGCCATaGGAGGCGTTGCAGAGGATC +
Preference number: 5 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESAKALP*EALQRI
Trigger: GATCCTCTGCAACGCCTCCAATGGCAGCGCCTTGGC...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGTGCGCGGGGGAGGTCTaGTCCTCAGATTTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLCAGEV*SSDLGS
Trigger: GCTCCCCAAATCTGAGGACAAGACCTCCCCCGCGCA...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGAGACAGGGATGCCTTaGCGCTGGGTAGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESETGMP*RWVGSR
Trigger: CCTGCTGCCTACCCAGCGCAAAGGCATCCCTGTCTC...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGCAGTACCACCAGCCATaGGGGTTCTTCTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVEQYHQP*GFFSST
Trigger: GGTGCTGGAGAAGAACCCCAATGGCTGGTGGTACTG...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS TCA 90 bp TTTCCGCCTTCTCCAGCACGTGCACCTCGGCGCCTTCGGGGAAGCTaGTCTCCGAGTCCTGGACCTTCTGATAGGCGCTGCACGTCACGT +
Preference number: 5 (lower is better)
Translates to: FPPSPARAPRRLRGS*SPSPGPSDRRCTSR
Trigger: ACGTGACGTGCAGCGCCTATCAGAAGGTCCAGGACTCGGAGATCAGCTTCCCCGAAGGCGCCGAGGTGCACGTGCTGGAGAAGGCGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp AAATGGGCCCGTTGCAGGGAAGAGGCAGGCGAGATCCTTCGGGGCTaGGCGGGATGCTTGTCACCTGAACCTCTGTCCCCTGAAGGCTCT +
Preference number: 5 (lower is better)
Translates to: KWARCREEAGEILRG*AGCLSPEPLSPEGS
Trigger: AGAGCCTTCAGGGGACAGAGGTTCAGGTGACAAGCATCCCGCCCAGCCCCGAAGGATCTCGCCTGCCTCTTCCCTGCAACGGGCCCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp TCCTCTTCCAGGGCCACGTCCTCAGAAGACTCACCCACCTTGAAATaGGCCCGTTGCAGGGAAGAGGCAGGCGAGATCCTTCGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SSSRATSSEDSPTLK*ARCREEAGEILRGW
Trigger: CCAGCCCCGAAGGATCTCGCCTGCCTCTTCCCTGCAACGGGCCCATTTCAAGGTGGGTGAGTCTTCTGAGGACGTGGCCCTGGAAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CCATCTTGTCCATCCCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAACACCACGGTGGCATCTaGCACGCAGTAGGCGAGCAT +
Preference number: 5 (lower is better)
Translates to: PSCPSPCLACRSSSSGSQHHGGI*HAVGEH
Trigger: ATGCTCGCCTACTGCGTGCAAGATGCCACCGTGGTG...TTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGGGATGGACAAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGCACGTAGGTGGCGCCTaGCCCTTCCCATTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVEHVGGA*PFPFLF
Trigger: AAAAAGGAATGGGAAGGGCAAGGCGCCACCTACGTG...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGAGACACAAACACAGATaGGGGCCTGACGGCCACTTG +
Preference number: 5 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVERHKHR*GPDGHL
Trigger: CAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCT...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTATCATGGGCTCGGCGTaGGTGTCGGCACCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCAIMGSA*VSAPGE
Trigger: CTCGCCAGGTGCCGACACCAACGCCGAGCCCATGAT...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237796.2
CDS TCA 90 bp GCTGGTTCGGCGGCTGAGGTTGGGTTTCTTGCGCTTGTCAATGTATaGGGCTGGGGCCCAGCCCTCCTTCTCCCCGATCTGCACGTACCA +
Preference number: 5 (lower is better)
Translates to: AGSAAEVGFLALVNV*GWGPALLLPDLHVP
Trigger: TGGTACGTGCAGATCGGGGAGAAGGAGGGCTGGGCCCCAGCCTCATACATTGACAAGCGCAAGAAACCCAACCTCAGCCGCCGAACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 90 bp GGTTGTTGTCCTTGGGTGGCGGAGACACAAACACAGATTGGGGCCTaGCGGCCACTTGCCGGACCCCGTTCCTCATCTTCACCGCTACGG +
Preference number: 5 (lower is better)
Translates to: GCCPWVAETQTQIGA*RPLAGPRSSSSPLR
Trigger: CCGTAGCGGTGAAGATGAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAAGGACAACAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS GCA 90 bp CCGGGTCGGCAGGTCATCCTTGGCCTTCTTCAGGTAGGACGCTGGTaGCCAACCCTCTTTGCCGAGGTACCTGATGTACCACCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: PGRQVILGLLQVGRW*PTLFAEVPDVPPAF
Trigger: GAAGGCTGGTGGTACATCAGGTACCTCGGCAAAGAGGGTTGGGCACCAGCGTCCTACCTGAAGAAGGCCAAGGATGACCTGCCGACCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp CTTCCGGGTCGGCAGGTCATCCTTGGCCTTCTTCAGGTAGGACGCTaGTGCCCAACCCTCTTTGCCGAGGTACCTGATGTACCACCAGCC +
Preference number: 5 (lower is better)
Translates to: LPGRQVILGLLQVGR*CPTLFAEVPDVPPA
Trigger: GGCTGGTGGTACATCAGGTACCTCGGCAAAGAGGGTTGGGCACCAGCGTCCTACCTGAAGAAGGCCAAGGATGACCTGCCGACCCGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp CGACTCGTTCCTCCGAAGGGCACAGGACAGGTTGTTGTCCTTGGGTaGCGGAGACACAAACACAGATTGGGGCCTGACGGCCACTTGCCG +
Preference number: 5 (lower is better)
Translates to: RLVPPKGTGQVVVLG*RRHKHRLGPDGHLP
Trigger: CGGCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAAGGACAACAACCTGTCCTGTGCCCTTCGGAGGAACGAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTGACACTTCCCCAGTCTaGGAGGTGTTGATGTCCGAG +
Preference number: 5 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSDTSPV*EVLMSE
Trigger: CTCGGACATCAACACCTCCAAGACTGGGGAAGTGTC...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp AAAGGGCTGAGCTCTTTGGAGACGCTGCCAAAGCCCAGAGCTGGTAGTTCTCCACGGCTGTGCTGCCTGTaGACCATCCCGCCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: KGLSSLETLPKPRAGSSPRLCCL*TIPPRV
Trigger: GACCCTGGGCGGGATGGTCAACAGGCAGCACAGCCG...TGGAGAACTACCAGCTCTGGGCTTTGGCAGCGTCTCCAAAGAGCTCAGCCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTCTGCCATTGGAGGCGTaGCAGAGGATCGGTAAGCTG +
Preference number: 5 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESLPLEA*QRIGKL
Trigger: CAGCTTACCGATCCTCTGCAACGCCTCCAATGGCAG...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTGGCTGGGCGGGATGCTaGTCACCTGAACCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCAGWAGC*SPEPLS
Trigger: GGACAGAGGTTCAGGTGACAAGCATCCCGCCCAGCC...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGAAGACTCACCCACCTaGAAATGGGCCCGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESEDSPT*KWARCR
Trigger: CCTGCAACGGGCCCATTTCAAGGTGGGTGAGTCTTC...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCACGTAGGTGGCGCCTaGCCCTTCCCATTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSHVGGA*PFPFLF
Trigger: AAAAAGGAATGGGAAGGGCAAGGCGCCACCTACGTG...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS GCA 90 bp CGTTGCAGGGAAGAGGCAGGCGAGATCCTTCGGGGCTGGGCGGGATaGTTGTCACCTGAACCTCTGTCCCCTGAAGGCTCTTCATTCATC +
Preference number: 5 (lower is better)
Translates to: RCREEAGEILRGWAG*LSPEPLSPEGSSFI
Trigger: GATGAATGAAGAGCCTTCAGGGGACAGAGGTTCAGGTGACAAGCATCCCGCCCAGCCCCGAAGGATCTCGCCTGCCTCTTCCCTGCAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp GGCCGTGCCTCAAAGAACCGGAAGACTTCGTCACACTGTGAAATGTaGGGCGGCAGCCGGACAAGCGCCCTGCAGTATTCATCGATGGGC +
Preference number: 5 (lower is better)
Translates to: GRASKNRKTSSHCEM*GGSRTSALQYSSMG
Trigger: GCCCATCGATGAATACTGCAGGGCGCTTGTCCGGCTGCCGCCCCACATTTCACAGTGTGACGAAGTCTTCCGGTTCTTTGAGGCACGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
CDS CCA 90 bp CAGGACAGGTTGTTGTCCTTGGGTGGCGGAGACACAAACACAGATTaGGGCCTGACGGCCACTTGCCGGACCCCGTTCCTCATCTTCACC +
Preference number: 5 (lower is better)
Translates to: QDRLLSLGGGDTNTD*GLTATCRTPFLIFT
Trigger: GGTGAAGATGAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAAGGACAACAACCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTGGCGGGGACCCAACCTaGCTCTTCAGATGTGCTCAC +
Preference number: 5 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCAGGDPT*LFRCAH
Trigger: GTGAGCACATCTGAAGAGCAAGGTTGGGTCCCCGCC...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CAACGTGCAATGCGGGGATCCCGGGCCCAGGGCATTCCTGCTCTTCCCTTTCTCTGTGCCTTGCGTCTCTaGGACACTTCCCCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: QRAMRGSRAQGIPALPFLCALRL*DTSPVL
Trigger: CAAGACTGGGGAAGTGTCCAAGAGACGCAAGGCACA...GAGAAAGGGAAGAGCAGGAATGCCCTGGGCCCGGGATCCCCGCATTGCACGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTTGTGCCTTGCGTCTCTaGGACACTTCCCCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESCALRL*DTSPVL
Trigger: CAAGACTGGGGAAGTGTCCAAGAGACGCAAGGCACA...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTCTTGAAATGGGCCCGTaGCAGGGAAGAGGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCALEMGP*QGRGRR
Trigger: TCGCCTGCCTCTTCCCTGCAACGGGCCCATTTCAAG...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTTCCAGGCTGTCTGACTaGCCCTCGTTCTGCGAGCTC +
Preference number: 5 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCASRLSD*PSFCEL
Trigger: GAGCTCGCAGAACGAGGGCAAGTCAGACAGCCTGGA...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGACAGGTTGTTGTCCTaGGGTGGCGGAGACACAAAC +
Preference number: 5 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESDRLLS*GGGDTN
Trigger: GTTTGTGTCTCCGCCACCCAAGGACAACAACCTGTC...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTAGGGCACAGGACAGGTaGTTGTCCTTGGGTGGCGGA +
Preference number: 5 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCARAQDR*LSLGGG
Trigger: TCCGCCACCCAAGGACAACAACCTGTCCTGTGCCCT...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp TGTCACCACCACGGGCTTTTGACAGAGGAGGCTAGTGGGTTGCATCCACCTGTGGAGACAGGGATGCCTTaGCGCTGGGTAGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: CHHHGLLTEEASGLHPPVETGMP*RWVGSR
Trigger: CCTGCTGCCTACCCAGCGCAAAGGCATCCCTGTCTC...CACAGGTGGATGCAACCCACTAGCCTCCTCTGTCAAAAGCCCGTGGTGGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS CCA 90 bp AATATCCATCTTCTCCTGGCTTTGAGACTCCGCTCGGTTCAGGACTaGCTTTGGTCTCACGGATGGCTTGGCTCGGGCGCAGGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: NIHLLLALRLRSVQD*LWSHGWLGSGAGGQ
Trigger: CTGGCCTCCTGCGCCCGAGCCAAGCCATCCGTGAGACCAAAGCCAGTCCTGAACCGAGCGGAGTCTCAAAGCCAGGAGAAGATGGATATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTGGTGCCCAACCCTCTTaGCCGAGGTACCTGATGTAC +
Preference number: 5 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCAGAQPS*PRYLMY
Trigger: GTACATCAGGTACCTCGGCAAAGAGGGTTGGGCACC...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGAAGCTGATCTCTTTCTaGGTGATGGGGGCCTCGGAT +
Preference number: 5 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLKLISF*VMGASD
Trigger: ATCCGAGGCCCCCATCACCAAGAAAGAGATCAGCTT...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp ATCTTTTCCATGTCTTCATCTTGGTGCCCGGGACAATGGCCTGCCTGGGCTGCTTGCGCGGGGGAGGTCTaGTCCTCAGATTTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: IFSMSSSWCPGQWPAWAACAGEV*SSDLGS
Trigger: GCTCCCCAAATCTGAGGACAAGACCTCCCCCGCGCA...AGCAGCCCAGGCAGGCCATTGTCCCGGGCACCAAGATGAAGACATGGAAAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTGTTCGGCGGCTGAGGTaGGGTTTCTTGCGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCAVRRLR*GFLRLS
Trigger: TGACAAGCGCAAGAAACCCAACCTCAGCCGCCGAAC...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp AAAGGGCTGAGCTCTTTGGAGACGCTGCCAAAGCCCAGAGCTGGTAGTTCTCCAGGCTGGGCGGGATGCTaGTCACCTGAACCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: KGLSSLETLPKPRAGSSPGWAGC*SPEPLS
Trigger: GGACAGAGGTTCAGGTGACAAGCATCCCGCCCAGCC...TGGAGAACTACCAGCTCTGGGCTTTGGCAGCGTCTCCAAAGAGCTCAGCCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp CCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTAGGTCACCATTGTTCTaGGACAAGGAGGACGAGGAT +
Preference number: 5 (lower is better)
Translates to: PCLACRSSSSGSQGSTLSRSPLF*DKEDED
Trigger: ATCCTCGTCCTCCTTGTCCAAGAACAATGGTGACCT...ACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp TGGCAGCCAGGCGGGCGCACTAATGGAGCTGGCTCAATGCAGACATCTGAGGAGAGACACAAACACAGATaGGGGCCTGACGGCCACTTG +
Preference number: 5 (lower is better)
Translates to: WQPGGRTNGAGSMQTSEERHKHR*GPDGHL
Trigger: CAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCT...CTCCTCAGATGTCTGCATTGAGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp ACTTCCAGAGGCAAGAAGCCAGCCACTGAAGTGGCTGAGCAGGGCAGGACCCAGGACAGGTTGTTGTCCTaGGGTGGCGGAGACACAAAC +
Preference number: 5 (lower is better)
Translates to: TSRGKKPATEVAEQGRTQDRLLS*GGGDTN
Trigger: GTTTGTGTCTCCGCCACCCAAGGACAACAACCTGTC...CTGGGTCCTGCCCTGCTCAGCCACTTCAGTGGCTGGCTTCTTGCCTCTGGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp AGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGGAAGGACCCTGTGCTCAGTACCACCAGCCATaGGGGTTCTTCTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: SSSSGSQGSTLSLEGPCAQYHQP*GFFSST
Trigger: GGTGCTGGAGAAGAACCCCAATGGCTGGTGGTACTG...AGCACAGGGTCCTTCCAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS TCA 90 bp ATCCTCAGGCCGTGCCTCAAAGAACCGGAAGACTTCGTCACACTGTaGAATGTGGGGCGGCAGCCGGACAAGCGCCCTGCAGTATTCATC +
Preference number: 5 (lower is better)
Translates to: ILRPCLKEPEDFVTL*NVGRQPDKRPAVFI
Trigger: GATGAATACTGCAGGGCGCTTGTCCGGCTGCCGCCCCACATTTCACAGTGTGACGAAGTCTTCCGGTTCTTTGAGGCACGGCCTGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
CDS TCA 90 bp GGTGTGCCTTGCGTCTCTTGGACACTTCCCCAGTCTTGGAGGTGTTaGTGTCCGAGTCGTCTCGTGTGCCATTCTGGGCCTCCAAGTAGG +
Preference number: 5 (lower is better)
Translates to: GVPCVSWTLPQSWRC*CPSRLVCHSGPPSR
Trigger: CCTACTTGGAGGCCCAGAATGGCACACGAGACGACTCGGACATCAACACCTCCAAGACTGGGGAAGTGTCCAAGAGACGCAAGGCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS TCA 90 bp CCCCAGAGGAGCCTCTGGCAGACAGGGTGTCTTCTGTGTATGGCCTaGAGCCCTCATTCTCATAGATGGTCTCCTCTTCCAGGGCCACGT +
Preference number: 5 (lower is better)
Translates to: PQRSLWQTGCLLCMA*SPHSHRWSPLPGPR
Trigger: ACGTGGCCCTGGAAGAGGAGACCATCTATGAGAATGAGGGCTTCAGGCCATACACAGAAGACACCCTGTCTGCCAGAGGCTCCTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS GCA 90 bp ATGGGTGGGGTGGCCCTCTTGCTCTGGTTCACAGTGTTGAGCGCCTaGACACGCTTCTCAATCTTTTCCAGGCTGTCTGACTTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: MGGVALLLWFTVLSA*TRFSIFSRLSDLPS
Trigger: CGAGGGCAAGTCAGACAGCCTGGAAAAGATTGAGAAGCGTGTGCAGGCGCTCAACACTGTGAACCAGAGCAAGAGGGCCACCCCACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp CCCCGGCCTGGAGGCTCAGCTCCGAGTTCTCTTGTTTCTTATAGTTaGACACCACCACGTACTGTTCCAGGATCATGGGCTCGGCGTTGG +
Preference number: 5 (lower is better)
Translates to: PRPGGSAPSSLVSYS*TPPRTVPGSWARRW
Trigger: CCAACGCCGAGCCCATGATCCTGGAACAGTACGTGGTGGTGTCCAACTATAAGAAACAAGAGAACTCGGAGCTGAGCCTCCAGGCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp ACGTCATACTCGGGTTCCTCGTATTTAACCTTCAGTGGGGAGCCCTaGCTCTCACAGGCACCCACAGGATTCTCCTCGGCCTCCTTAGGC +
Preference number: 5 (lower is better)
Translates to: TSYSGSSYLTFSGEP*LSQAPTGFSSASLG
Trigger: GCCTAAGGAGGCCGAGGAGAATCCTGTGGGTGCCTGTGAGAGCCAGGGCTCCCCACTGAAGGTTAAATACGAGGAACCCGAGTATGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGCCAGATGCCTTCTTGTaGAGAAGGTTGCTGATCTCC +
Preference number: 5 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLPDAFL*RRLLIS
Trigger: GGAGATCAGCAACCTTCTCAACAAGAAGGCATCTGG...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTTCCCCAGATGCCTTCTaGTTGAGAAGGTTGCTGATC +
Preference number: 5 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESSPDAF*LRRLLI
Trigger: GATCAGCAACCTTCTCAACAAGAAGGCATCTGGGGA...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp TCAAGCACACATCCAAAGCTTCATAGCCCACACACATCAGGAGGCTGGGGCGAGCTTGAAATGGGCCCGTaGCAGGGAAGAGGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: SSTHPKLHSPHTSGGWGELEMGP*QGRGRR
Trigger: TCGCCTGCCTCTTCCCTGCAACGGGCCCATTTCAAG...CTCGCCCCAGCCTCCTGATGTGTGTGGGCTATGAAGCTTTGGATGTGTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGAGGAGAAGGAGATGTaGGACTGGTTTTTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESEEKEM*DWFFPS
Trigger: ACTGGGGAAAAACCAGTCCAACATCTCCTTCTCCTC...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CCCGTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGACATCCTTGAGGTTGTaGTGGATAAACTGGGACTTC +
Preference number: 5 (lower is better)
Translates to: PVSGVPQLIQWQPRQHVETSLRL*WINWDF
Trigger: GAAGTCCCAGTTTATCCACAACAACCTCAAGGATGT...CTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS TCA 90 bp CTTCAGATGTGCTCACAAACCACCAGCCGCTTTCGTTCTTCTCGATaGCATCTACCACCTCCCCGGCCTGGAGGCTCAGCTCCGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LQMCSQTTSRFRSSR*HLPPPRPGGSAPSS
Trigger: AGAACTCGGAGCTGAGCCTCCAGGCCGGGGAGGTGGTAGATGTCATCGAGAAGAACGAAAGCGGCTGGTGGTTTGTGAGCACATCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp ACTGTCCCCAGAGGAGCCTCTGGCAGACAGGGTGTCTTCTGTGTATaGCCTGAAGCCCTCATTCTCATAGATGGTCTCCTCTTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: TVPRGASGRQGVFCV*PEALILIDGLLFQG
Trigger: GCCCTGGAAGAGGAGACCATCTATGAGAATGAGGGCTTCAGGCCATACACAGAAGACACCCTGTCTGCCAGAGGCTCCTCTGGGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp CTTGTTTCTTATAGTTGGACACCACCACGTACTGTTCCAGGATCATaGGCTCGGCGTTGGTGTCGGCACCTGGCGAGGGCAGAAAGCACG +
Preference number: 5 (lower is better)
Translates to: LVSYSWTPPRTVPGS*ARRWCRHLARAEST
Trigger: CGTGCTTTCTGCCCTCGCCAGGTGCCGACACCAACGCCGAGCCCATGATCCTGGAACAGTACGTGGTGGTGTCCAACTATAAGAAACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CAGGAACCTGAACACTTTGTTTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCGGCGGGGACCCAACCTaGCTCTTCAGATGTGCTCAC +
Preference number: 5 (lower is better)
Translates to: QEPEHFVSPSRGLGFTQFGGDPT*LFRCAH
Trigger: GTGAGCACATCTGAAGAGCAAGGTTGGGTCCCCGCC...GAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp TGTCACCACCACGGGCTTTTGACAGAGGAGGCTAGTGGGTTGCATCCACCTGTGGACACTTCCCCAGTCTaGGAGGTGTTGATGTCCGAG +
Preference number: 5 (lower is better)
Translates to: CHHHGLLTEEASGLHPPVDTSPV*EVLMSE
Trigger: CTCGGACATCAACACCTCCAAGACTGGGGAAGTGTC...CACAGGTGGATGCAACCCACTAGCCTCCTCTGTCAAAAGCCCGTGGTGGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp TGGCAGCCAGGCGGGCGCACTAATGGAGCTGGCTCAATGCAGACATCTGAGGAGTCCCCAGATGCCTTCTaGTTGAGAAGGTTGCTGATC +
Preference number: 5 (lower is better)
Translates to: WQPGGRTNGAGSMQTSEESPDAF*LRRLLI
Trigger: GATCAGCAACCTTCTCAACAAGAAGGCATCTGGGGA...CTCCTCAGATGTCTGCATTGAGCCAGCTCCATTAGTGCGCCCGCCTGGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp TCAAGCACACATCCAAAGCTTCATAGCCCACACACATCAGGAGGCTGGGGCGAGGTTCGGCGGCTGAGGTaGGGTTTCTTGCGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: SSTHPKLHSPHTSGGWGEVRRLR*GFLRLS
Trigger: TGACAAGCGCAAGAAACCCAACCTCAGCCGCCGAAC...CTCGCCCCAGCCTCCTGATGTGTGTGGGCTATGAAGCTTTGGATGTGTGCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp ACTTCCAGAGGCAAGAAGCCAGCCACTGAAGTGGCTGAGCAGGGCAGGACCCAGGAGGAGAAGGAGATGTaGGACTGGTTTTTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: TSRGKKPATEVAEQGRTQEEKEM*DWFFPS
Trigger: ACTGGGGAAAAACCAGTCCAACATCTCCTTCTCCTC...CTGGGTCCTGCCCTGCTCAGCCACTTCAGTGGCTGGCTTCTTGCCTCTGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS GCA 90 bp GATCTGCACGTACCACCAACCACCCGAGTTCTTGTCGATGACCTCTaGCTTCTGTCCGCCTCGAAAGCTGATCCCGTCAGAAATGCAGGA +
Preference number: 5 (lower is better)
Translates to: DLHVPPTTRVLVDDL*LLSASKADPVRNAG
Trigger: TCCTGCATTTCTGACGGGATCAGCTTTCGAGGCGGACAGAAGGCAGAGGTCATCGACAAGAACTCGGGTGGTTGGTGGTACGTGCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp GAAATGTCAACCACTGACTCACGACCCAAAGCAGACAGAGGACTGTTTCCACTCATCATGGGCTCGGCGTaGGTGTCGGCACCTGTCACG +
Preference number: 5 (lower is better)
Translates to: EMSTTDSRPKADRGLFPLIMGSA*VSAPVT
Trigger: CGTGACAGGTGCCGACACCAACGCCGAGCCCATGAT...GAGTGGAAACAGTCCTCTGTCTGCTTTGGGTCGTGAGTCAGTGGTTGACATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp CAGGAACCTGAACACTTTGTTTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCGGTGCCCAACCCTCTTaGCCGAGGTACCTGATGTAC +
Preference number: 5 (lower is better)
Translates to: QEPEHFVSPSRGLGFTQFGAQPS*PRYLMY
Trigger: GTACATCAGGTACCTCGGCAAAGAGGGTTGGGCACC...GAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp CAGGAACCTGAACACTTTGTTTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCCTGCCATTGGAGGCGTaGCAGAGGATCGGTAAGCTG +
Preference number: 5 (lower is better)
Translates to: QEPEHFVSPSRGLGFTQFLPLEA*QRIGKL
Trigger: CAGCTTACCGATCCTCTGCAACGCCTCCAATGGCAG...GAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp TGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGACATCCTTGAGGTTGTaGTGGATAAACTGGGACTTC +
Preference number: 5 (lower is better)
Translates to: CLACRSSSSGSQGSTLSLTSLRL*WINWDF
Trigger: GAAGTCCCAGTTTATCCACAACAACCTCAAGGATGT...CAGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTTACACATCCTTGAGGTaGTTGTGGATAAACTGGGAC +
Preference number: 5 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESYTSLR*LWINWD
Trigger: GTCCCAGTTTATCCACAACAACCTCAAGGATGTGTA...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS GCA 90 bp GGCCTCGGATCCCTCGCCTTCAGCCGGAGCCTCCTTATCCCCAGATaGCTTCTTGTTGAGAAGGTTGCTGATCTCCATAATGTTCCCTAT +
Preference number: 5 (lower is better)
Translates to: GLGSLAFSRSLLIPR*LLVEKVADLHNVPY
Trigger: ATAGGGAACATTATGGAGATCAGCAACCTTCTCAACAAGAAGGCATCTGGGGATAAGGAGGCTCCGGCTGAAGGCGAGGGATCCGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTGAGATGTACACATCCTaGAGGTTGTTGTGGATAAAC +
Preference number: 5 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESEMYTS*RLLWIN
Trigger: GTTTATCCACAACAACCTCAAGGATGTGTACATCTC...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS TCA 90 bp AGTGTTGAGCGCCTGCACACGCTTCTCAATCTTTTCCAGGCTGTCTaGCTTGCCCTCGTTCTGCGAGCTCTTTCCTGTGTCTCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: SVERLHTLLNLFQAV*LALVLRALSCVSLF
Trigger: AAAGAGGGAGACACAGGAAAGAGCTCGCAGAACGAGGGCAAGTCAGACAGCCTGGAAAAGATTGAGAAGCGTGTGCAGGCGCTCAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS GCA 90 bp CACCCCCTCCTGGAAGCCAGCCGTCTCTTCGTCCCCCTCATAGTCTaGAATCGAGATGTACACATCCTTGAGGTTGTTGTGGATAAACTG +
Preference number: 5 (lower is better)
Translates to: HPLLEASRLFVPLIV*NRDVHILEVVVDKL
Trigger: CAGTTTATCCACAACAACCTCAAGGATGTGTACATCTCGATTGCAGACTATGAGGGGGACGAAGAGACGGCTGGCTTCCAGGAGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp GTGTCTGGCGTGCCGCAGCTCATCCAGTGGCAGCCAAGGCAGCACGTTGAGTCTTTCTTGTTGAGAAGGTaGCTGATCTCCATAATGTTC +
Preference number: 5 (lower is better)
Translates to: VSGVPQLIQWQPRQHVESFLLRR*LISIMF
Trigger: GAACATTATGGAGATCAGCAACCTTCTCAACAAGAA...AGACTCAACGTGCTGCCTTGGCTGCCACTGGATGAGCTGCGGCACGCCAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CAGGAACCTGAACACTTTGTTTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCAAGCTGATCTCTTTCTaGGTGATGGGGGCCTCGGAT +
Preference number: 5 (lower is better)
Translates to: QEPEHFVSPSRGLGFTQFKLISF*VMGASD
Trigger: ATCCGAGGCCCCCATCACCAAGAAAGAGATCAGCTT...GAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp ACTTCCAGAGGCAAGAAGCCAGCCACTGAAGTGGCTGAGCAGGGCAGGACCCAGGAGATGTACACATCCTaGAGGTTGTTGTGGATAAAC +
Preference number: 5 (lower is better)
Translates to: TSRGKKPATEVAEQGRTQEMYTS*RLLWIN
Trigger: GTTTATCCACAACAACCTCAAGGATGTGTACATCTC...CTGGGTCCTGCCCTGCTCAGCCACTTCAGTGGCTGGCTTCTTGCCTCTGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS GCA 90 bp ACACGCTTCTCAATCTTTTCCAGGCTGTCTGACTTGCCCTCGTTCTaGGAGCTCTTTCCTGTGTCTCCCTCTTTGCTAGCTGTGTCAGGT +
Preference number: 5 (lower is better)
Translates to: TRFSIFSRLSDLPSF*ELFPVSPSLLAVSG
Trigger: ACCTGACACAGCTAGCAAAGAGGGAGACACAGGAAAGAGCTCGCAGAACGAGGGCAAGTCAGACAGCCTGGAAAAGATTGAGAAGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp TCTGCAATCGAGATGTACACATCCTTGAGGTTGTTGTGGATAAACTaGGACTTCTCTATGGGCTTGGGACGCACGGGGGAGACAGGGATG +
Preference number: 5 (lower is better)
Translates to: SAIEMYTSLRLLWIN*DFSMGLGRTGETGM
Trigger: CATCCCTGTCTCCCCCGTGCGTCCCAAGCCCATAGAGAAGTCCCAGTTTATCCACAACAACCTCAAGGATGTGTACATCTCGATTGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS-3UTR CAA 90 bp CTTCCAAGTTACCTTCCAGGCCTCTCAGTAACTGGTAGGGACACCCATGTCCTCCCAGATGCCTTCTTGTaGAGAAGGTTGCTGATCTCC +
Preference number: 5 (lower is better)
Translates to: LPSYLPGLSVTGRDTHVLPDAFL*RRLLIS
Trigger: GGAGATCAGCAACCTTCTCAACAAGAAGGCATCTGG...GAGGACATGGGTGTCCCTACCAGTTACTGAGAGGCCTGGAAGGTAACTTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp CCCTTCTTGTTTCAAGTATTCTTTGTGCTGGCAGGGTTTGTGCTGTGCCCTGATGAAGACTCACCCACCTaGAAATGGGCCCGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: PFLFQVFFVLAGFVLCPDEDSPT*KWARCR
Trigger: CCTGCAACGGGCCCATTTCAAGGTGGGTGAGTCTTC...ATCAGGGCACAGCACAAACCCTGCCAGCACAAAGAATACTTGAAACAAGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp TTCCTTCAATCTACAAGCACCAATGTACCTACTTTGTGGTCTGGGGACCCAGATTCCAGGCTGTCTGACTaGCCCTCGTTCTGCGAGCTC +
Preference number: 5 (lower is better)
Translates to: FLQSTSTNVPTLWSGDPDSRLSD*PSFCEL
Trigger: GAGCTCGCAGAACGAGGGCAAGTCAGACAGCCTGGA...ATCTGGGTCCCCAGACCACAAAGTAGGTACATTGGTGCTTGTAGATTGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp TACTCATTCTCTCTAACCCCATGCTATTCAAGTGGAGAATTACCACCAGTCTCTGCCAAGGCGCTGCCATaGGAGGCGTTGCAGAGGATC +
Preference number: 5 (lower is better)
Translates to: YSFSLTPCYSSGELPPVSAKALP*EALQRI
Trigger: GATCCTCTGCAACGCCTCCAATGGCAGCGCCTTGGC...AGAGACTGGTGGTAATTCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp TACTCATTCTCTCTAACCCCATGCTATTCAAGTGGAGAATTACCACCAGTCTCTCCTGTCACGTCCTTCTaGGGAGACTCAGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: YSFSLTPCYSSGELPPVSPVTSF*GDSAQL
Trigger: CAGCTGGGCTGAGTCTCCCAAGAAGGACGTGACAGG...AGAGACTGGTGGTAATTCTCCACTTGAATAGCATGGGGTTAGAGAGAATGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp CAGGAACCTGAACACTTTGTTTCACCGAGCCGGGGACTTGGCTTTACCCAGTTCCAGCTCCGAGTTCTCTaGTTTCTTATAGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: QEPEHFVSPSRGLGFTQFQLRVL*FLIVGH
Trigger: GTGTCCAACTATAAGAAACAAGAGAACTCGGAGCTG...GAACTGGGTAAAGCCAAGTCCCCGGCTCGGTGAAACAAAGTGTTCAGGTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp GAAATGTCAACCACTGACTCACGACCCAAAGCAGACAGAGGACTGTTTCCACTCAGGTCACCATTGTTCTaGGACAAGGAGGACGAGGAT +
Preference number: 5 (lower is better)
Translates to: EMSTTDSRPKADRGLFPLRSPLF*DKEDED
Trigger: ATCCTCGTCCTCCTTGTCCAAGAACAATGGTGACCT...GAGTGGAAACAGTCCTCTGTCTGCTTTGGGTCGTGAGTCAGTGGTTGACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS CCA 90 bp GAGGAGGAGAAGGAGATGTTGGACTGGTTTTTCCCCAGTTCTGCCTaGGCATTCTTCTCTGCTTTGAGCTTTAGGAGTGATGAGGATTTG +
Preference number: 5 (lower is better)
Translates to: EEEKEMLDWFFPSSA*AFFSALSFRSDEDL
Trigger: CAAATCCTCATCACTCCTAAAGCTCAAAGCAGAGAAGAATGCCCAGGCAGAACTGGGGAAAAACCAGTCCAACATCTCCTTCTCCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 90 bp ATCTTGCCTGGAAGAAAGGGAATAATCCTTTGCTTCGGATCCTTCTaGCCACCTTCAATAGGAAACTTATCCAGAAGCTGCATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ILPGRKGIILCFGSF*PPSIGNLSRSCICR
Trigger: CCTGCAGATGCAGCTTCTGGATAAGTTTCCTATTGAAGGTGGCCAGAAGGATCCGAAGCAAAGGATTATTCCCTTTCTTCCAGGCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
CDS-3UTR CAA 90 bp TCATCACACGGTAGCAGTAGCTGCTCACTTCTGCCTTCCAAGTTACCTTCCAGGTTCTTGTTGAGAAGGTaGCTGATCTCCATAATGTTC +
Preference number: 5 (lower is better)
Translates to: SSHGSSSCSLLPSKLPSRFLLRR*LISIMF
Trigger: GAACATTATGGAGATCAGCAACCTTCTCAACAAGAA...CCTGGAAGGTAACTTGGAAGGCAGAAGTGAGCAGCTACTGCTACCGTGTGATGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS-3UTR CAA 90 bp TGCGTCTTCGGGCATTATATAAACCTCAATAATGACCTCAGAAGGGCTCATTCTAAAGGGAATAATCCTTaGCTTCGGATCCTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: CVFGHYINLNNDLRRAHSKGNNP*LRILLA
Trigger: GGCCAGAAGGATCCGAAGCAAAGGATTATTCCCTTT...AGAATGAGCCCTTCTGAGGTCATTATTGAGGTTTATATAATGCCCGAAGACGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081619.10
CDS CCA 72 bp TTGCGCTGGGTAGGCAGCAGGGGCGATTCTGAGCCCTaGCTGGCAGCCCGCTCGGCCAGGCGGCCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LRWVGSRGDSEP*LAARSARRPLA
Trigger: GGCCAAGGGCCGCCTGGCCGAGCGGGCTGCCAGCCAGGGCTCAGAATCGCCCCTGCTGCCTACCCAGCGCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 72 bp CCGCTCGGCCAGGCGGCCCTTGGCCTCAGCGGCTGCTaGCCGTGCGGTGCTAAAGGAGGAGTTCCTGCGGAC +
Preference number: 6 (lower is better)
Translates to: PLGQAALGLSGC*PCGAKGGVPAD
Trigger: GTCCGCAGGAACTCCTCCTTTAGCACCGCACGGTCAGCAGCCGCTGAGGCCAAGGGCCGCCTGGCCGAGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp GGCGATTCTGAGCCCTGGCTGGCAGCCCGCTCGGCCAGGCGGCCCTaGGCCTCAGCGGCTGCTGACCGTGCGGTGCTAAAGGAGGAGTTC +
Preference number: 6 (lower is better)
Translates to: GDSEPWLAARSARRP*ASAAADRAVLKEEF
Trigger: GAACTCCTCCTTTAGCACCGCACGGTCAGCAGCCGCTGAGGCCAAGGGCCGCCTGGCCGAGCGGGCTGCCAGCCAGGGCTCAGAATCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp TTCCAGGATCATGGGCTCGGCGTTGGTGTCGGCACCTaGCGAGGGCAGAAAGCACGCGGTGAGCCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: FQDHGLGVGVGT*RGQKARGEPAA
Trigger: GGCCGCTGGCTCACCGCGTGCTTTCTGCCCTCGCCAGGTGCCGACACCAACGCCGAGCCCATGATCCTGGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237796.2
CDS GCA 72 bp GCCCAGGGTCCACCGGCGATCCAGGCGCCGCAGGTGTaGCTTGCGTCTCTTGGACACTTCCCCAGTCTTGGA +
Preference number: 6 (lower is better)
Translates to: AQGPPAIQAPQV*LASLGHFPSLG
Trigger: TCCAAGACTGGGGAAGTGTCCAAGAGACGCAAGGCACACCTGCGGCGCCTGGATCGCCGGTGGACCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS GCA 72 bp CGTTCCTCATCTTCACCGCTACGGTGCCCGAGGTCTTaGCGAAGCCCCCGGGAGGCTTCGAGGGGATGGGTG +
Preference number: 6 (lower is better)
Translates to: RSSSSPLRCPRS*RSPREASRGWV
Trigger: CACCCATCCCCTCGAAGCCTCCCGGGGGCTTCGGCAAGACCTCGGGCACCGTAGCGGTGAAGATGAGGAACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp TTGGGACGCACGGGGGAGACAGGGATGCCTTTGCGCTaGGTAGGCAGCAGGGGCGATTCTGAGCCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: LGRTGETGMPLR*VGSRGDSEPWL
Trigger: CAGCCAGGGCTCAGAATCGCCCCTGCTGCCTACCCAGCGCAAAGGCATCCCTGTCTCCCCCGTGCGTCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp CCGGGAGGCTTCGAGGGGATGGGTGGGGTGGCCCTCTaGCTCTGGTTCACAGTGTTGAGCGCCTGCACACGC +
Preference number: 6 (lower is better)
Translates to: PGGFEGMGGVAL*LWFTVLSACTR
Trigger: GCGTGTGCAGGCGCTCAACACTGTGAACCAGAGCAAGAGGGCCACCCCACCCATCCCCTCGAAGCCTCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp CCGTTCCTCATCTTCACCGCTACGGTGCCCGAGGTCTaGCCGAAGCCCCCGGGAGGCTTCGAGGGGATGGGT +
Preference number: 6 (lower is better)
Translates to: PFLIFTATVPEV*PKPPGGFEGMG
Trigger: ACCCATCCCCTCGAAGCCTCCCGGGGGCTTCGGCAAGACCTCGGGCACCGTAGCGGTGAAGATGAGGAACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp ATGGGCTTGGGACGCACGGGGGAGACAGGGATGCCTTaGCGCTGGGTAGGCAGCAGGGGCGATTCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: MGLGRTGETGMP*RWVGSRGDSEP
Trigger: GGGCTCAGAATCGCCCCTGCTGCCTACCCAGCGCAAAGGCATCCCTGTCTCCCCCGTGCGTCCCAAGCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp GGCGGCACCTTGGGCCGCGTCAGAGTGCTGGTTCGGCGGCTGAGGTaGGGTTTCTTGCGCTTGTCAATGTATGAGGCTGGGGCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: GGTLGRVRVLVRRLR*GFLRLSMYEAGAQP
Trigger: GGGCTGGGCCCCAGCCTCATACATTGACAAGCGCAAGAAACCCAACCTCAGCCGCCGAACCAGCACTCTGACGCGGCCCAAGGTGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS GCA 72 bp GGGTCCACCGGCGATCCAGGCGCCGCAGGTGTGCCTTaGGTCTCTTGGACACTTCCCCAGTCTTGGAGGTGT +
Preference number: 6 (lower is better)
Translates to: GSTGDPGAAGVP*VSWTLPQSWRC
Trigger: ACACCTCCAAGACTGGGGAAGTGTCCAAGAGACGCAAGGCACACCTGCGGCGCCTGGATCGCCGGTGGACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS CCA 72 bp TGGCCACAGCTGGGGAGCCCTGGGCTAGCTTGGATGTaGTCCTCTCGGGAATGGCCAAGGCGCTGCCATTGG +
Preference number: 6 (lower is better)
Translates to: WPQLGSPGLAWM*SSREWPRRCHW
Trigger: CCAATGGCAGCGCCTTGGCCATTCCCGAGAGGACCACATCCAAGCTAGCCCAGGGCTCCCCAGCTGTGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp CTCGGTTCAGGACTGGCTTTGGTCTCACGGATGGCTTaGCTCGGGCGCAGGAGGCCAGCCCGGCCTTCACAT +
Preference number: 6 (lower is better)
Translates to: LGSGLALVSRMA*LGRRRPARPSH
Trigger: ATGTGAAGGCCGGGCTGGCCTCCTGCGCCCGAGCCAAGCCATCCGTGAGACCAAAGCCAGTCCTGAACCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp CTTGCCGAAGCCCCCGGGAGGCTTCGAGGGGATGGGTaGGGTGGCCCTCTTGCTCTGGTTCACAGTGTTGAG +
Preference number: 6 (lower is better)
Translates to: LAEAPGRLRGDG*GGPLALVHSVE
Trigger: CTCAACACTGTGAACCAGAGCAAGAGGGCCACCCCACCCATCCCCTCGAAGCCTCCCGGGGGCTTCGGCAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp CCACCACGTACTGTTCCAGGATCATGGGCTCGGCGTTaGTGTCGGCACCTGGCGAGGGCAGAAAGCACGCGG +
Preference number: 6 (lower is better)
Translates to: PPRTVPGSWARR*CRHLARAESTR
Trigger: CCGCGTGCTTTCTGCCCTCGCCAGGTGCCGACACCAACGCCGAGCCCATGATCCTGGAACAGTACGTGGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237796.2
CDS CAA 72 bp AGGGTCCACCGGCGATCCAGGCGCCGCAGGTGTGCCTaGCGTCTCTTGGACACTTCCCCAGTCTTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: RVHRRSRRRRCA*RLLDTSPVLEV
Trigger: CACCTCCAAGACTGGGGAAGTGTCCAAGAGACGCAAGGCACACCTGCGGCGCCTGGATCGCCGGTGGACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS CAA 90 bp CAGGGCCACGTCCTCAGAAGACTCACCCACCTTGAAATGGGCCCGTaGCAGGGAAGAGGCAGGCGAGATCCTTCGGGGCTGGGCGGGATG +
Preference number: 6 (lower is better)
Translates to: QGHVLRRLTHLEMGP*QGRGRRDPSGLGGM
Trigger: CATCCCGCCCAGCCCCGAAGGATCTCGCCTGCCTCTTCCCTGCAACGGGCCCATTTCAAGGTGGGTGAGTCTTCTGAGGACGTGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp CCATCTTCTCCTGGCTTTGAGACTCCGCTCGGTTCAGGACTGGCTTaGGTCTCACGGATGGCTTGGCTCGGGCGCAGGAGGCCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: PSSPGFETPLGSGLA*VSRMAWLGRRRPAR
Trigger: CCGGGCTGGCCTCCTGCGCCCGAGCCAAGCCATCCGTGAGACCAAAGCCAGTCCTGAACCGAGCGGAGTCTCAAAGCCAGGAGAAGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp GACTTCTCTATGGGCTTGGGACGCACGGGGGAGACAGGGATGCCTTaGCGCTGGGTAGGCAGCAGGGGCGATTCTGAGCCCTGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: DFSMGLGRTGETGMP*RWVGSRGDSEPWLA
Trigger: TGCCAGCCAGGGCTCAGAATCGCCCCTGCTGCCTACCCAGCGCAAAGGCATCCCTGTCTCCCCCGTGCGTCCCAAGCCCATAGAGAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 72 bp TCTCCAGCACGTGCACCTCGGCGCCTTCGGGGAAGCTaGTCTCCGAGTCCTGGACCTTCTGATAGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: SPARAPRRLRGS*SPSPGPSDRRC
Trigger: GCAGCGCCTATCAGAAGGTCCAGGACTCGGAGATCAGCTTCCCCGAAGGCGCCGAGGTGCACGTGCTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS GCA 72 bp ACGTACCACCACCCACTTTCCGCCTTCTCCAGCACGTaGACCTCGGCGCCTTCGGGGAAGCTGATCTCCGAG +
Preference number: 6 (lower is better)
Translates to: TYHHPLSAFSST*TSAPSGKLISE
Trigger: CTCGGAGATCAGCTTCCCCGAAGGCGCCGAGGTGCACGTGCTGGAGAAGGCGGAAAGTGGGTGGTGGTACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp CGTTGCAGGGAAGAGGCAGGCGAGATCCTTCGGGGCTaGGCGGGATGCTTGTCACCTGAACCTCTGTCCCCT +
Preference number: 6 (lower is better)
Translates to: RCREEAGEILRG*AGCLSPEPLSP
Trigger: AGGGGACAGAGGTTCAGGTGACAAGCATCCCGCCCAGCCCCGAAGGATCTCGCCTGCCTCTTCCCTGCAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp CTGGCTTTGAGACTCCGCTCGGTTCAGGACTGGCTTTaGTCTCACGGATGGCTTGGCTCGGGCGCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: LALRLRSVQDWL*SHGWLGSGAGG
Trigger: GCCTCCTGCGCCCGAGCCAAGCCATCCGTGAGACCAAAGCCAGTCCTGAACCGAGCGGAGTCTCAAAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp CCTGGCTTTGAGACTCCGCTCGGTTCAGGACTGGCTTaGGTCTCACGGATGGCTTGGCTCGGGCGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: PGFETPLGSGLA*VSRMAWLGRRR
Trigger: CCTCCTGCGCCCGAGCCAAGCCATCCGTGAGACCAAAGCCAGTCCTGAACCGAGCGGAGTCTCAAAGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp ACCACCACGTACTGTTCCAGGATCATGGGCTCGGCGTaGGTGTCGGCACCTGGCGAGGGCAGAAAGCACGCG +
Preference number: 6 (lower is better)
Translates to: TTTYCSRIMGSA*VSAPGEGRKHA
Trigger: CGCGTGCTTTCTGCCCTCGCCAGGTGCCGACACCAACGCCGAGCCCATGATCCTGGAACAGTACGTGGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237796.2
CDS CAA 90 bp CTTGGGTGGCGGAGACACAAACACAGATTGGGGCCTGACGGCCACTaGCCGGACCCCGTTCCTCATCTTCACCGCTACGGTGCCCGAGGT +
Preference number: 6 (lower is better)
Translates to: LGWRRHKHRLGPDGH*PDPVPHLHRYGARG
Trigger: ACCTCGGGCACCGTAGCGGTGAAGATGAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp CGCGTCAGAGTGCTGGTTCGGCGGCTGAGGTTGGGTTTCTTGCGCTaGTCAATGTATGAGGCTGGGGCCCAGCCCTCCTTCTCCCCGATC +
Preference number: 6 (lower is better)
Translates to: RVRVLVRRLRLGFLR*SMYEAGAQPSFSPI
Trigger: GATCGGGGAGAAGGAGGGCTGGGCCCCAGCCTCATACATTGACAAGCGCAAGAAACCCAACCTCAGCCGCCGAACCAGCACTCTGACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp TTGGGCCGCGTCAGAGTGCTGGTTCGGCGGCTGAGGTTGGGTTTCTaGCGCTTGTCAATGTATGAGGCTGGGGCCCAGCCCTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: LGRVRVLVRRLRLGF*RLSMYEAGAQPSFS
Trigger: GGAGAAGGAGGGCTGGGCCCCAGCCTCATACATTGACAAGCGCAAGAAACCCAACCTCAGCCGCCGAACCAGCACTCTGACGCGGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp CCGCCAGGTTCTTCTTCCGGGTCGGCAGGTCATCCTTaGCCTTCTTCAGGTAGGACGCTGGTGCCCAACCCT +
Preference number: 6 (lower is better)
Translates to: PPGSSSGSAGHP*PSSGRTLVPNP
Trigger: AGGGTTGGGCACCAGCGTCCTACCTGAAGAAGGCCAAGGATGACCTGCCGACCCGGAAGAAGAACCTGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp AGCCCTGGGCTAGCTTGGATGTGGTCCTCTCGGGAATaGCCAAGGCGCTGCCATTGGAGGCGTTGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: SPGLAWMWSSRE*PRRCHWRRCRG
Trigger: TCCTCTGCAACGCCTCCAATGGCAGCGCCTTGGCCATTCCCGAGAGGACCACATCCAAGCTAGCCCAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp GAGGCAGGCGAGATCCTTCGGGGCTGGGCGGGATGCTaGTCACCTGAACCTCTGTCCCCTGAAGGCTCTTCA +
Preference number: 6 (lower is better)
Translates to: EAGEILRGWAGC*SPEPLSPEGSS
Trigger: TGAAGAGCCTTCAGGGGACAGAGGTTCAGGTGACAAGCATCCCGCCCAGCCCCGAAGGATCTCGCCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp CTGCCATTGGAGGCGTTGCAGAGGATCGGTAAGCTGATCTCTTTCTaGGTGATGGGGGCCTCGGATCCCTCGCCTTCAGCCGGAGCCTCC +
Preference number: 6 (lower is better)
Translates to: LPLEALQRIGKLISF*VMGASDPSPSAGAS
Trigger: GGAGGCTCCGGCTGAAGGCGAGGGATCCGAGGCCCCCATCACCAAGAAAGAGATCAGCTTACCGATCCTCTGCAACGCCTCCAATGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp GCTCGGGCGCAGGAGGCCAGCCCGGCCTTCACATCAGGATCTTTCTaGGTCCCAACCTTAGGGGTGTCACGGATACCTGCATCTGAGGCA +
Preference number: 6 (lower is better)
Translates to: ARAQEASPAFTSGSF*VPTLGVSRIPASEA
Trigger: TGCCTCAGATGCAGGTATCCGTGACACCCCTAAGGTTGGGACCAAGAAAGATCCTGATGTGAAGGCCGGGCTGGCCTCCTGCGCCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 72 bp CCGTGCCTCAAAGAACCGGAAGACTTCGTCACACTGTaGAATGTGGGGCGGCAGCCGGACAAGCGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: PCLKEPEDFVTL*NVGRQPDKRPA
Trigger: TGCAGGGCGCTTGTCCGGCTGCCGCCCCACATTTCACAGTGTGACGAAGTCTTCCGGTTCTTTGAGGCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
CDS TCA 72 bp CCTTGGGTGGCGGAGACACAAACACAGATTGGGGCCTaGCGGCCACTTGCCGGACCCCGTTCCTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: PWVAETQTQIGA*RPLAGPRSSSS
Trigger: TGAAGATGAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS GCA 72 bp GGAGACACAAACACAGATTGGGGCCTGACGGCCACTTaGCGGACCCCGTTCCTCATCTTCACCGCTACGGTG +
Preference number: 6 (lower is better)
Translates to: GDTNTDWGLTAT*RTPFLIFTATV
Trigger: CACCGTAGCGGTGAAGATGAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp GTATTCTACCTCAACAGAAGGGGGCTCTGGCGGCTTTaGCAGCTGGAACCCCAGGCTGGATTCTCTGCGCGG +
Preference number: 6 (lower is better)
Translates to: VFYLNRRGLWRL*QLEPQAGFSAR
Trigger: CCGCGCAGAGAATCCAGCCTGGGGTTCCAGCTGCCAAAGCCGCCAGAGCCCCCTTCTGTTGAGGTAGAATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp TTGTTGTCCTTGGGTGGCGGAGACACAAACACAGATTaGGGCCTGACGGCCACTTGCCGGACCCCGTTCCTC +
Preference number: 6 (lower is better)
Translates to: LLSLGGGDTNTD*GLTATCRTPFL
Trigger: GAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAAGGACAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp CCTCCGAAGGGCACAGGACAGGTTGTTGTCCTTGGGTaGCGGAGACACAAACACAGATTGGGGCCTGACGGC +
Preference number: 6 (lower is better)
Translates to: PPKGTGQVVVLG*RRHKHRLGPDG
Trigger: GCCGTCAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAAGGACAACAACCTGTCCTGTGCCCTTCGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp GGCTCGGCGTTGGTGTCGGCACCTGTCACGTCCTTCTaGGGAGACTCAGCCCAGCTGGACAACCACACTGAT +
Preference number: 6 (lower is better)
Translates to: GSALVSAPVTSF*GDSAQLDNHTD
Trigger: ATCAGTGTGGTTGTCCAGCTGGGCTGAGTCTCCCAAGAAGGACGTGACAGGTGCCGACACCAACGCCGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
CDS CAA 72 bp ACAGTGACATACTTCTCTTCTCGGCTGTGCTGCCTGTaGACCATCCCGCCCAGGGTCCACCGGCGATCCAGG +
Preference number: 6 (lower is better)
Translates to: TVTYFSSRLCCL*TIPPRVHRRSR
Trigger: CCTGGATCGCCGGTGGACCCTGGGCGGGATGGTCAACAGGCAGCACAGCCGAGAAGAGAAGTATGTCACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS CAA 72 bp GTGCTGGTTCGGCGGCTGAGGTTGGGTTTCTTGCGCTaGTCAATGTATGAGGCTGGGGCCCAGCCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: VLVRRLRLGFLR*SMYEAGAQPSF
Trigger: GAAGGAGGGCTGGGCCCCAGCCTCATACATTGACAAGCGCAAGAAACCCAACCTCAGCCGCCGAACCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp GTCAGAGTGCTGGTTCGGCGGCTGAGGTTGGGTTTCTaGCGCTTGTCAATGTATGAGGCTGGGGCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: VRVLVRRLRLGF*RLSMYEAGAQP
Trigger: GGGCTGGGCCCCAGCCTCATACATTGACAAGCGCAAGAAACCCAACCTCAGCCGCCGAACCAGCACTCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp CTTCTGATAGGCGCTGCACGTCACGTAGGTGGCGCCTaGCCCTTCCCATTCCTTTTTGGGGACACACGGGGG +
Preference number: 6 (lower is better)
Translates to: LLIGAARHVGGA*PFPFLFGDTRG
Trigger: CCCCCGTGTGTCCCCAAAAAGGAATGGGAAGGGCAAGGCGCCACCTACGTGACGTGCAGCGCCTATCAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp CGGAGACACAAACACAGATTGGGGCCTGACGGCCACTaGCCGGACCCCGTTCCTCATCTTCACCGCTACGGT +
Preference number: 6 (lower is better)
Translates to: RRHKHRLGPDGH*PDPVPHLHRYG
Trigger: ACCGTAGCGGTGAAGATGAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp GTTGTTGTCCTTGGGTGGCGGAGACACAAACACAGATaGGGGCCTGACGGCCACTTGCCGGACCCCGTTCCT +
Preference number: 6 (lower is better)
Translates to: VVVLGWRRHKHR*GPDGHLPDPVP
Trigger: AGGAACGGGGTCCGGCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAAGGACAACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp CCCTCCTTCTCCCCGATCTGCACGTACCACCAACCACCCGAGTTCTaGTCGATGACCTCTGCCTTCTGTCCGCCTCGAAAGCTGATCCCG +
Preference number: 6 (lower is better)
Translates to: PSFSPICTYHQPPEF*SMTSAFCPPRKLIP
Trigger: CGGGATCAGCTTTCGAGGCGGACAGAAGGCAGAGGTCATCGACAAGAACTCGGGTGGTTGGTGGTACGTGCAGATCGGGGAGAAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp TGCAGGGAAGAGGCAGGCGAGATCCTTCGGGGCTGGGCGGGATGCTaGTCACCTGAACCTCTGTCCCCTGAAGGCTCTTCATTCATCTCG +
Preference number: 6 (lower is better)
Translates to: CREEAGEILRGWAGC*SPEPLSPEGSSFIS
Trigger: CGAGATGAATGAAGAGCCTTCAGGGGACAGAGGTTCAGGTGACAAGCATCCCGCCCAGCCCCGAAGGATCTCGCCTGCCTCTTCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp ATGGTCTCCTCTTCCAGGGCCACGTCCTCAGAAGACTCACCCACCTaGAAATGGGCCCGTTGCAGGGAAGAGGCAGGCGAGATCCTTCGG +
Preference number: 6 (lower is better)
Translates to: MVSSSRATSSEDSPT*KWARCREEAGEILR
Trigger: CCGAAGGATCTCGCCTGCCTCTTCCCTGCAACGGGCCCATTTCAAGGTGGGTGAGTCTTCTGAGGACGTGGCCCTGGAAGAGGAGACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp GTGGCCGTTAGCGACTCGTTCCTCCGAAGGGCACAGGACAGGTTGTaGTCCTTGGGTGGCGGAGACACAAACACAGATTGGGGCCTGACG +
Preference number: 6 (lower is better)
Translates to: VAVSDSFLRRAQDRL*SLGGGDTNTDWGLT
Trigger: CGTCAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAAGGACAACAACCTGTCCTGTGCCCTTCGGAGGAACGAGTCGCTAACGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp TCGGTGGCCGTTAGCGACTCGTTCCTCCGAAGGGCACAGGACAGGTaGTTGTCCTTGGGTGGCGGAGACACAAACACAGATTGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: SVAVSDSFLRRAQDR*LSLGGGDTNTDWGL
Trigger: CAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAAGGACAACAACCTGTCCTGTGCCCTTCGGAGGAACGAGTCGCTAACGGCCACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 72 bp GCACCTTGGGCCGCGTCAGAGTGCTGGTTCGGCGGCTaGGGTTGGGTTTCTTGCGCTTGTCAATGTATGAGG +
Preference number: 6 (lower is better)
Translates to: APWAASECWFGG*GWVSCACQCMR
Trigger: CCTCATACATTGACAAGCGCAAGAAACCCAACCTCAGCCGCCGAACCAGCACTCTGACGCGGCCCAAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp GCTCGGCGTTGGTGTCGGCACCTGTCACGTCCTTCTTaGGAGACTCAGCCCAGCTGGACAACCACACTGATT +
Preference number: 6 (lower is better)
Translates to: ARRWCRHLSRPS*ETQPSWTTTLI
Trigger: AATCAGTGTGGTTGTCCAGCTGGGCTGAGTCTCCCAAGAAGGACGTGACAGGTGCCGACACCAACGCCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
CDS CCA 72 bp TCGGGTTCCTCGTATTTAACCTTCAGTGGGGAGCCCTaGCTCTCACAGGCACCCACAGGATTCTCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: SGSSYLTFSGEP*LSQAPTGFSSA
Trigger: GGCCGAGGAGAATCCTGTGGGTGCCTGTGAGAGCCAGGGCTCCCCACTGAAGGTTAAATACGAGGAACCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp AGGGCCACGTCCTCAGAAGACTCACCCACCTTGAAATaGGCCCGTTGCAGGGAAGAGGCAGGCGAGATCCTT +
Preference number: 6 (lower is better)
Translates to: RATSSEDSPTLK*ARCREEAGEIL
Trigger: AAGGATCTCGCCTGCCTCTTCCCTGCAACGGGCCCATTTCAAGGTGGGTGAGTCTTCTGAGGACGTGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp TATAGTTGGACACCACCACGTACTGTTCCAGGATCATaGGCTCGGCGTTGGTGTCGGCACCTGGCGAGGGCA +
Preference number: 6 (lower is better)
Translates to: YSWTPPRTVPGS*ARRWCRHLARA
Trigger: TGCCCTCGCCAGGTGCCGACACCAACGCCGAGCCCATGATCCTGGAACAGTACGTGGTGGTGTCCAACTATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237796.2
CDS CAA 72 bp ACCACCACGTACTGTTCCAGGATCATGGGCTCGGCGTaGGTGTCGGCACCTGTCACGTCCTTCTTGGGAGAC +
Preference number: 6 (lower is better)
Translates to: TTTYCSRIMGSA*VSAPVTSFLGD
Trigger: GTCTCCCAAGAAGGACGTGACAGGTGCCGACACCAACGCCGAGCCCATGATCCTGGAACAGTACGTGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
CDS CAA 72 bp GAGGCGTTGCAGAGGATCGGTAAGCTGATCTCTTTCTaGGTGATGGGGGCCTCGGATCCCTCGCCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: EALQRIGKLISF*VMGASDPSPSA
Trigger: GGCTGAAGGCGAGGGATCCGAGGCCCCCATCACCAAGAAAGAGATCAGCTTACCGATCCTCTGCAACGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp AGTATTCTACCTCAACAGAAGGGGGCTCTGGCGGCTTaGGCAGCTGGAACCCCAGGCTGGATTCTCTGCGCG +
Preference number: 6 (lower is better)
Translates to: SILPQQKGALAA*AAGTPGWILCA
Trigger: CGCGCAGAGAATCCAGCCTGGGGTTCCAGCTGCCAAAGCCGCCAGAGCCCCCTTCTGTTGAGGTAGAATACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp TTGGGCCGCGTCAGAGTGCTGGTTCGGCGGCTGAGGTaGGGTTTCTTGCGCTTGTCAATGTATGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LGRVRVLVRRLR*GFLRLSMYEAG
Trigger: CCCAGCCTCATACATTGACAAGCGCAAGAAACCCAACCTCAGCCGCCGAACCAGCACTCTGACGCGGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp GATGTGGTCCTCTCGGGAATGGCCAAGGCGCTGCCATTGGAGGCGTaGCAGAGGATCGGTAAGCTGATCTCTTTCTTGGTGATGGGGGCC +
Preference number: 6 (lower is better)
Translates to: DVVLSGMAKALPLEA*QRIGKLISFLVMGA
Trigger: GGCCCCCATCACCAAGAAAGAGATCAGCTTACCGATCCTCTGCAACGCCTCCAATGGCAGCGCCTTGGCCATTCCCGAGAGGACCACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp CTGCGAGCTCTTTCCTGTGTCTCCCTCTTTGCTAGCTGTGTCAGGTaGCTGGTTCTCCTCGGCCACCAAGTAGTGGGAAGGAGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: LRALSCVSLFASCVR*LVLLGHQVVGRSPA
Trigger: GGCTGGGCTCCTTCCCACTACTTGGTGGCCGAGGAGAACCAGCAACCTGACACAGCTAGCAAAGAGGGAGACACAGGAAAGAGCTCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp ACAGGACAGGTTGTTGTCCTTGGGTGGCGGAGACACAAACACAGATaGGGGCCTGACGGCCACTTGCCGGACCCCGTTCCTCATCTTCAC +
Preference number: 6 (lower is better)
Translates to: TGQVVVLGWRRHKHR*GPDGHLPDPVPHLH
Trigger: GTGAAGATGAGGAACGGGGTCCGGCAAGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAAGGACAACAACCTGTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp GTTAGCGACTCGTTCCTCCGAAGGGCACAGGACAGGTTGTTGTCCTaGGGTGGCGGAGACACAAACACAGATTGGGGCCTGACGGCCACT +
Preference number: 6 (lower is better)
Translates to: VSDSFLRRAQDRLLS*GGGDTNTDWGLTAT
Trigger: AGTGGCCGTCAGGCCCCAATCTGTGTTTGTGTCTCCGCCACCCAAGGACAACAACCTGTCCTGTGCCCTTCGGAGGAACGAGTCGCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 72 bp TGCTCACAAACCACCAGCCGCTTTCGTTCTTCTCGATaGCATCTACCACCTCCCCGGCCTGGAGGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: CSQTTSRFRSSR*HLPPPRPGGSA
Trigger: AGCTGAGCCTCCAGGCCGGGGAGGTGGTAGATGTCATCGAGAAGAACGAAAGCGGCTGGTGGTTTGTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 72 bp TGGGTGGGGTGGCCCTCTTGCTCTGGTTCACAGTGTTaGGCGCCTGCACACGCTTCTCAATCTTTTCCAGGC +
Preference number: 6 (lower is better)
Translates to: WVGWPSCSGSQC*APAHASQSFPG
Trigger: GCCTGGAAAAGATTGAGAAGCGTGTGCAGGCGCTCAACACTGTGAACCAGAGCAAGAGGGCCACCCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp AGTCGTCTCGTGTGCCATTCTGGGCCTCCAAGTAGGTaGCGGGGACCCAACCTTGCTCTTCAGATGTGCTCA +
Preference number: 6 (lower is better)
Translates to: SRLVCHSGPPSR*RGPNLALQMCS
Trigger: TGAGCACATCTGAAGAGCAAGGTTGGGTCCCCGCCACCTACTTGGAGGCCCAGAATGGCACACGAGACGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp CGGCAGGTCATCCTTGGCCTTCTTCAGGTAGGACGCTaGTGCCCAACCCTCTTTGCCGAGGTACCTGATGTA +
Preference number: 6 (lower is better)
Translates to: RQVILGLLQVGR*CPTLFAEVPDV
Trigger: TACATCAGGTACCTCGGCAAAGAGGGTTGGGCACCAGCGTCCTACCTGAAGAAGGCCAAGGATGACCTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp GATGTGGTCCTCTCGGGAATGGCCAAGGCGCTGCCATaGGAGGCGTTGCAGAGGATCGGTAAGCTGATCTCT +
Preference number: 6 (lower is better)
Translates to: DVVLSGMAKALP*EALQRIGKLIS
Trigger: AGAGATCAGCTTACCGATCCTCTGCAACGCCTCCAATGGCAGCGCCTTGGCCATTCCCGAGAGGACCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp TCCCCGATCTGCACGTACCACCAACCACCCGAGTTCTaGTCGATGACCTCTGCCTTCTGTCCGCCTCGAAAG +
Preference number: 6 (lower is better)
Translates to: SPICTYHQPPEF*SMTSAFCPPRK
Trigger: CTTTCGAGGCGGACAGAAGGCAGAGGTCATCGACAAGAACTCGGGTGGTTGGTGGTACGTGCAGATCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp CAGGAGGCCAGCCCGGCCTTCACATCAGGATCTTTCTaGGTCCCAACCTTAGGGGTGTCACGGATACCTGCA +
Preference number: 6 (lower is better)
Translates to: QEASPAFTSGSF*VPTLGVSRIPA
Trigger: TGCAGGTATCCGTGACACCCCTAAGGTTGGGACCAAGAAAGATCCTGATGTGAAGGCCGGGCTGGCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp CCCTCGTTCTGCGAGCTCTTTCCTGTGTCTCCCTCTTaGCTAGCTGTGTCAGGTTGCTGGTTCTCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: PSFCELFPVSPS*LAVSGCWFSSA
Trigger: GGCCGAGGAGAACCAGCAACCTGACACAGCTAGCAAAGAGGGAGACACAGGAAAGAGCTCGCAGAACGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp TCGTGTGCCATTCTGGGCCTCCAAGTAGGTGGCGGGGACCCAACCTaGCTCTTCAGATGTGCTCACAAACCACCAGCCGCTTTCGTTCTT +
Preference number: 6 (lower is better)
Translates to: SCAILGLQVGGGDPT*LFRCAHKPPAAFVL
Trigger: AAGAACGAAAGCGGCTGGTGGTTTGTGAGCACATCTGAAGAGCAAGGTTGGGTCCCCGCCACCTACTTGGAGGCCCAGAATGGCACACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp GCTAGCTTGGATGTGGTCCTCTCGGGAATGGCCAAGGCGCTGCCATaGGAGGCGTTGCAGAGGATCGGTAAGCTGATCTCTTTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: ASLDVVLSGMAKALP*EALQRIGKLISFLV
Trigger: CACCAAGAAAGAGATCAGCTTACCGATCCTCTGCAACGCCTCCAATGGCAGCGCCTTGGCCATTCCCGAGAGGACCACATCCAAGCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 72 bp TGCGTCTCTTGGACACTTCCCCAGTCTTGGAGGTGTTaGTGTCCGAGTCGTCTCGTGTGCCATTCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: CVSWTLPQSWRC*CPSRLVCHSGP
Trigger: AGGCCCAGAATGGCACACGAGACGACTCGGACATCAACACCTCCAAGACTGGGGAAGTGTCCAAGAGACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS CAA 72 bp TTGCGTCTCTTGGACACTTCCCCAGTCTTGGAGGTGTaGATGTCCGAGTCGTCTCGTGTGCCATTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LRLLDTSPVLEV*MSESSRVPFWA
Trigger: GGCCCAGAATGGCACACGAGACGACTCGGACATCAACACCTCCAAGACTGGGGAAGTGTCCAAGAGACGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000237796.2
CDS CAA 72 bp CTCTCGGGAATGGCCAAGGCGCTGCCATTGGAGGCGTaGCAGAGGATCGGTAAGCTGATCTCTTTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LSGMAKALPLEA*QRIGKLISFLV
Trigger: CACCAAGAAAGAGATCAGCTTACCGATCCTCTGCAACGCCTCCAATGGCAGCGCCTTGGCCATTCCCGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp ATGGGTGGGGTGGCCCTCTTGCTCTGGTTCACAGTGTaGAGCGCCTGCACACGCTTCTCAATCTTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: MGGVALLLWFTV*SACTRFSIFSR
Trigger: CCTGGAAAAGATTGAGAAGCGTGTGCAGGCGCTCAACACTGTGAACCAGAGCAAGAGGGCCACCCCACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp AGGTTGTTGTGGATAAACTGGGACTTCTCTATGGGCTaGGGACGCACGGGGGAGACAGGGATGCCTTTGCGC +
Preference number: 6 (lower is better)
Translates to: RLLWINWDFSMG*GRTGETGMPLR
Trigger: GCGCAAAGGCATCCCTGTCTCCCCCGTGCGTCCCAAGCCCATAGAGAAGTCCCAGTTTATCCACAACAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 72 bp CGCCTGCACACGCTTCTCAATCTTTTCCAGGCTGTCTaGCTTGCCCTCGTTCTGCGAGCTCTTTCCTGTGTC +
Preference number: 6 (lower is better)
Translates to: RLHTLLNLFQAV*LALVLRALSCV
Trigger: GACACAGGAAAGAGCTCGCAGAACGAGGGCAAGTCAGACAGCCTGGAAAAGATTGAGAAGCGTGTGCAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS GCA 72 bp AGTAGGTGGCGGGGACCCAACCTTGCTCTTCAGATGTaGTCACAAACCACCAGCCGCTTTCGTTCTTCTCGA +
Preference number: 6 (lower is better)
Translates to: SRWRGPNLALQM*SQTTSRFRSSR
Trigger: TCGAGAAGAACGAAAGCGGCTGGTGGTTTGTGAGCACATCTGAAGAGCAAGGTTGGGTCCCCGCCACCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS GCA 72 bp GTGGCCCTCTTGCTCTGGTTCACAGTGTTGAGCGCCTaGACACGCTTCTCAATCTTTTCCAGGCTGTCTGAC +
Preference number: 6 (lower is better)
Translates to: VALLLWFTVLSA*TRFSIFSRLSD
Trigger: GTCAGACAGCCTGGAAAAGATTGAGAAGCGTGTGCAGGCGCTCAACACTGTGAACCAGAGCAAGAGGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp TCAAAGAACCGGAAGACTTCGTCACACTGTGAAATGTaGGGCGGCAGCCGGACAAGCGCCCTGCAGTATTCA +
Preference number: 6 (lower is better)
Translates to: SKNRKTSSHCEM*GGSRTSALQYS
Trigger: TGAATACTGCAGGGCGCTTGTCCGGCTGCCGCCCCACATTTCACAGTGTGACGAAGTCTTCCGGTTCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
CDS CAA 72 bp CACCTCCCCGGCCTGGAGGCTCAGCTCCGAGTTCTCTaGTTTCTTATAGTTGGACACCACCACGTACTGTTC +
Preference number: 6 (lower is better)
Translates to: HLPGLEAQLRVL*FLIVGHHHVLF
Trigger: GAACAGTACGTGGTGGTGTCCAACTATAAGAAACAAGAGAACTCGGAGCTGAGCCTCCAGGCCGGGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp CTTTCCTGTGTCTCCCTCTTTGCTAGCTGTGTCAGGTaGCTGGTTCTCCTCGGCCACCAAGTAGTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: LSCVSLFASCVR*LVLLGHQVVGR
Trigger: CCTTCCCACTACTTGGTGGCCGAGGAGAACCAGCAACCTGACACAGCTAGCAAAGAGGGAGACACAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp GTTAGCGACTCGTTCCTCCGAAGGGCACAGGACAGGTaGTTGTCCTTGGGTGGCGGAGACACAAACACAGAT +
Preference number: 6 (lower is better)
Translates to: VSDSFLRRAQDR*LSLGGGDTNTD
Trigger: ATCTGTGTTTGTGTCTCCGCCACCCAAGGACAACAACCTGTCCTGTGCCCTTCGGAGGAACGAGTCGCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp CACCTGTCACGTCCTTCTTGGGAGACTCAGCCCAGCTaGACAACCACACTGATTTCCTCTTGGAACTGCCAT +
Preference number: 6 (lower is better)
Translates to: HLSRPSWETQPS*TTTLISSWNCH
Trigger: ATGGCAGTTCCAAGAGGAAATCAGTGTGGTTGTCCAGCTGGGCTGAGTCTCCCAAGAAGGACGTGACAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
CDS CCA 72 bp AGAGGAGCCTCTGGCAGACAGGGTGTCTTCTGTGTATaGCCTGAAGCCCTCATTCTCATAGATGGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: RGASGRQGVFCV*PEALILIDGLL
Trigger: GAGGAGACCATCTATGAGAATGAGGGCTTCAGGCCATACACAGAAGACACCCTGTCTGCCAGAGGCTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp GACATCTACCACCTCCCCGGCCTGGAGGCTCAGCTCCGAGTTCTCTaGTTTCTTATAGTTGGACACCACCACGTACTGTTCCAGGATCAT +
Preference number: 6 (lower is better)
Translates to: DIYHLPGLEAQLRVL*FLIVGHHHVLFQDH
Trigger: ATGATCCTGGAACAGTACGTGGTGGTGTCCAACTATAAGAAACAAGAGAACTCGGAGCTGAGCCTCCAGGCCGGGGAGGTGGTAGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp CCCTCGCCTTCAGCCGGAGCCTCCTTATCCCCAGATGCCTTCTTGTaGAGAAGGTTGCTGATCTCCATAATGTTCCCTATGATCTCCACC +
Preference number: 6 (lower is better)
Translates to: PSPSAGASLSPDAFL*RRLLISIMFPMIST
Trigger: GGTGGAGATCATAGGGAACATTATGGAGATCAGCAACCTTCTCAACAAGAAGGCATCTGGGGATAAGGAGGCTCCGGCTGAAGGCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp TTGAGCGCCTGCACACGCTTCTCAATCTTTTCCAGGCTGTCTGACTaGCCCTCGTTCTGCGAGCTCTTTCCTGTGTCTCCCTCTTTGCTA +
Preference number: 6 (lower is better)
Translates to: LSACTRFSIFSRLSD*PSFCELFPVSPSLL
Trigger: TAGCAAAGAGGGAGACACAGGAAAGAGCTCGCAGAACGAGGGCAAGTCAGACAGCCTGGAAAAGATTGAGAAGCGTGTGCAGGCGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 72 bp AGCCTCTGGCAGACAGGGTGTCTTCTGTGTATGGCCTaGAGCCCTCATTCTCATAGATGGTCTCCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: SLWQTGCLLCMA*SPHSHRWSPLP
Trigger: TGGAAGAGGAGACCATCTATGAGAATGAGGGCTTCAGGCCATACACAGAAGACACCCTGTCTGCCAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 72 bp TCTCGTCTTTGCTCTGGCTGGTGTAGGGCTGCACAGTaGCATACTTCTCTTCTTCCCCAGTCTTGGAGGTGT +
Preference number: 6 (lower is better)
Translates to: SRLCSGWCRAAQ*HTSLLPQSWRC
Trigger: ACACCTCCAAGACTGGGGAAGAAGAGAAGTATGTCACTGTGCAGCCCTACACCAGCCAGAGCAAAGACGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111800.4
CDS GCA 72 bp TCCCTCGCCTTCAGCCGGAGCCTCCTTATCCCCAGATaGCTTCTTGTTGAGAAGGTTGCTGATCTCCATAAT +
Preference number: 6 (lower is better)
Translates to: SLAFSRSLLIPR*LLVEKVADLHN
Trigger: ATTATGGAGATCAGCAACCTTCTCAACAAGAAGGCATCTGGGGATAAGGAGGCTCCGGCTGAAGGCGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS GCA 72 bp CTGGAAGCCAGCCGTCTCTTCGTCCCCCTCATAGTCTaGAATCGAGATGTACACATCCTTGAGGTTGTTGTG +
Preference number: 6 (lower is better)
Translates to: LEASRLFVPLIV*NRDVHILEVVV
Trigger: CACAACAACCTCAAGGATGTGTACATCTCGATTGCAGACTATGAGGGGGACGAAGAGACGGCTGGCTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CCA 72 bp GAGATGTACACATCCTTGAGGTTGTTGTGGATAAACTaGGACTTCTCTATGGGCTTGGGACGCACGGGGGAG +
Preference number: 6 (lower is better)
Translates to: EMYTSLRLLWIN*DFSMGLGRTGE
Trigger: CTCCCCCGTGCGTCCCAAGCCCATAGAGAAGTCCCAGTTTATCCACAACAACCTCAAGGATGTGTACATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 90 bp GATCCCTCGCCTTCAGCCGGAGCCTCCTTATCCCCAGATGCCTTCTaGTTGAGAAGGTTGCTGATCTCCATAATGTTCCCTATGATCTCC +
Preference number: 6 (lower is better)
Translates to: DPSPSAGASLSPDAF*LRRLLISIMFPMIS
Trigger: GGAGATCATAGGGAACATTATGGAGATCAGCAACCTTCTCAACAAGAAGGCATCTGGGGATAAGGAGGCTCCGGCTGAAGGCGAGGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS TCA 72 bp TCCTCTTGGAACTGCCATAGTCTTCTTTTGGAGGGTTaGCATCCTCAGGCCGTGCCTCAAAGAACCGGAAGA +
Preference number: 6 (lower is better)
Translates to: SSWNCHSLLLEG*HPQAVPQRTGR
Trigger: TCTTCCGGTTCTTTGAGGCACGGCCTGAGGATGTCAACCCTCCAAAAGAAGACTATGGCAGTTCCAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
CDS CCA 72 bp GGAGGCTCAGCTCCGAGTTCTCTTGTTTCTTATAGTTaGACACCACCACGTACTGTTCCAGGATCATGGGCT +
Preference number: 6 (lower is better)
Translates to: GGSAPSSLVSYS*TPPRTVPGSWA
Trigger: AGCCCATGATCCTGGAACAGTACGTGGTGGTGTCCAACTATAAGAAACAAGAGAACTCGGAGCTGAGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp CCTTCAGCCGGAGCCTCCTTATCCCCAGATGCCTTCTaGTTGAGAAGGTTGCTGATCTCCATAATGTTCCCT +
Preference number: 6 (lower is better)
Translates to: PSAGASLSPDAF*LRRLLISIMFP
Trigger: AGGGAACATTATGGAGATCAGCAACCTTCTCAACAAGAAGGCATCTGGGGATAAGGAGGCTCCGGCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp TCAGCCGGAGCCTCCTTATCCCCAGATGCCTTCTTGTaGAGAAGGTTGCTGATCTCCATAATGTTCCCTATG +
Preference number: 6 (lower is better)
Translates to: SAGASLSPDAFL*RRLLISIMFPM
Trigger: CATAGGGAACATTATGGAGATCAGCAACCTTCTCAACAAGAAGGCATCTGGGGATAAGGAGGCTCCGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4
ENSMUST00000237796.2
CDS CAA 72 bp GAAGAGGATCTTGCCTGGAAGAAAGGGAATAATCCTTaGCTTCGGATCCTTCTGGCCACCTTCAATAGGAAA +
Preference number: 6 (lower is better)
Translates to: EEDLAWKKGNNP*LRILLATFNRK
Trigger: TTTCCTATTGAAGGTGGCCAGAAGGATCCGAAGCAAAGGATTATTCCCTTTCTTCCAGGCAAGATCCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000081619.10
ENSMUST00000111800.4