Pregenerated sensors for SH3GLB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026860Ensembl transcript IDs: ENSMUST00000028214.15, ENSMUST00000100215.11, ENSMUST00000113620.10, ENSMUST00000113621.10, ENSMUST00000163668.3
Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCAGCACTTGGTGCTGCTGCTCTGGCTGACCCTTCTGGTTTCCTaGCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACC | + |
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Preference number: 1 (lower is better) Translates to: RQHLVLLLWLTLLVS*HTPSPACVLLSPST Trigger: GGTTGAGGGGGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAGCAGCACCAAGTGCTGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR GCA 90 bp | CTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTTCATaGCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: LSPSTFHSQKADVLS*QEHPSPAYPGPMVV Trigger: CACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCATGAAAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR CCA 90 bp | GGCAGATGTTCTTTCATGCCAAGAGCATCCATCCCCAGCATATCCTaGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGG | + |
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Preference number: 1 (lower is better) Translates to: GRCSFMPRASIPSIS*AHGGVKCSDPSALR Trigger: CCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCATGAAAGAACATCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR CAA 90 bp | GCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTaGGTGCTGCTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACT | + |
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Preference number: 2 (lower is better) Translates to: ATVPSQSHEGSGRQH*VLLLWLTLLVSCHT Trigger: AGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAGCAGCACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR GCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGGGGAAGCCTGGGGTGTaGAGGGTTGCAGGTCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: VATVPSQSHEGSGRQHLVGKPGV*RVAGQK Trigger: CTTCTGACCTGCAACCCTGCACACCCCAGGCTTCCC...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGGCAGACGACTCTAAGTaGCAGAGCCTGGGAAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: VATVPSQSHEGSGRQHLVADDSK*QSLGRG Trigger: GCCCCTTCCCAGGCTCTGCCACTTAGAGTCGTCTGC...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGGGGAAGCCTGGGGTGTaGAGGGTTGCAGGTCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LLWLTLLVSCHTPSPACVGKPGV*RVAGQK Trigger: CTTCTGACCTGCAACCCTGCACACCCCAGGCTTCCC...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGGCAGACGACTCTAAGTaGCAGAGCCTGGGAAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: WLTLLVSCHTPSPACVLLADDSK*QSLGRG Trigger: GCCCCTTCCCAGGCTCTGCCACTTAGAGTCGTCTGC...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGGCAGACGACTCTAAGTaGCAGAGCCTGGGAAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LLWLTLLVSCHTPSPACVADDSK*QSLGRG Trigger: GCCCCTTCCCAGGCTCTGCCACTTAGAGTCGTCTGC...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CCA 90 bp | TTCATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAAGGGAGCTGGGAAGCCTaGGGTGTGCAGGGTTGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: FMPRASIPSISWAHGGVKGSWEA*GVQGCR Trigger: CCTGCAACCCTGCACACCCCAGGCTTCCCAGCTCCC...TTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGATCCCCAGCATATCCTaGGCCCATGGTGGTGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: LLWLTLLVSCHTPSPACVIPSIS*AHGGVK Trigger: TTTGACACCACCATGGGCCCAGGATATGCTGGGGAT...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATATCCCCAGCATATCCTaGGCCCATGGTGGTGTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SPACVLLSPSTFHSQKADIPSIS*AHGGVK Trigger: TTTGACACCACCATGGGCCCAGGATATGCTGGGGAT...ATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGTTGGTGCTGCTGCTCTaGCTGACCCTTCTGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: EGMTAVATVPSQSHEGSGLVLLL*LTLLVS Trigger: GGAAACCAGAAGGGTCAGCCAGAGCAGCAGCACCAA...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTGCAGACGACTCTAAGTaGCAGAGCCTGGGAAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: MPRASIPSISWAHGGVKCADDSK*QSLGRG Trigger: GCCCCTTCCCAGGCTCTGCCACTTAGAGTCGTCTGC...ACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGATCCCCAGCATATCCTaGGCCCATGGTGGTGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: EGMTAVATVPSQSHEGSGIPSIS*AHGGVK Trigger: TTTGACACCACCATGGGCCCAGGATATGCTGGGGAT...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR TCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGTCTTTAATAGCTGAATaGCGGGCACAGCCAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: VATVPSQSHEGSGRQHLVSLIAE*RAQPEK Trigger: CTTTTCTGGCTGTGCCCGTCATTCAGCTATTAAAGA...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR TCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGGCCCAGCCAGAGCCATaGGGGAAGTGGGAGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: AHKGFICQRASRQAEVRMAQPEP*GKWEAA Trigger: TGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGC...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR GCA 90 bp | TTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCGCAGATGTTCTTTCATaGCAAGAGCATCCATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: FPATLLALPVCCCPPQPSADVLS*QEHPSP Trigger: TGGGGATGGATGCTCTTGGCATGAAAGAACATCTGC...GGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTACTAGCAGAGGGGCCTaGGGCCATTCTGTCTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: MPRASIPSISWAHGGVKCTSRGA*GHSVLW Trigger: CCACAAGACAGAATGGCCCCAGGCCCCTCTGCTAGT...ACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGTCTTTAATAGCTGAATaGCGGGCACAGCCAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LLWLTLLVSCHTPSPACVSLIAE*RAQPEK Trigger: CTTTTCTGGCTGTGCCCGTCATTCAGCTATTAAAGA...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCTTTAATAGCTGAATaGCGGGCACAGCCAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: WLTLLVSCHTPSPACVLLSLIAE*RAQPEK Trigger: CTTTTCTGGCTGTGCCCGTCATTCAGCTATTAAAGA...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGTCTTTAATAGCTGAATaGCGGGCACAGCCAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: EGMTAVATVPSQSHEGSGSLIAE*RAQPEK Trigger: CTTTTCTGGCTGTGCCCGTCATTCAGCTATTAAAGA...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR TCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGTGCTGCTGCTCTGGCTaGCCCTTCTGGTTTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: AHKGFICQRASRQAEVRMCCCSG*PFWFPA Trigger: GGCAGGAAACCAGAAGGGTCAGCCAGAGCAGCAGCA...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR TCA 90 bp | GGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGTTAGTTAGATGCTGCTGCTCTGGCTaGCCCTTCTGGTTTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GFICQRASRQAEVRMLVRCCCSG*PFWFPA Trigger: GGCAGGAAACCAGAAGGGTCAGCCAGAGCAGCAGCA...TCTAACTAACATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGATCCCCAGCATATCCTaGGCCCATGGTGGTGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: AHKGFICQRASRQAEVRMIPSIS*AHGGVK Trigger: TTTGACACCACCATGGGCCCAGGATATGCTGGGGAT...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR TCA 90 bp | ATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGTCTTTAATAGCTGAATaGCGGGCACAGCCAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: ISWAHGGVKCSDPSALRESLIAE*RAQPEK Trigger: CTTTTCTGGCTGTGCCCGTCATTCAGCTATTAAAGA...CTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CAA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGCTGGGGTGTGCAGGGTaGCAGGTCAGAAGCAGGACT | + |
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Preference number: 3 (lower is better) Translates to: WLTLLVSCHTPSPACVLLLGCAG*QVRSRT Trigger: AGTCCTGCTTCTGACCTGCAACCCTGCACACCCCAG...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR GCA 72 bp | TTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTaGTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: FWFPATLLALPV*CCPPQPSTARR Trigger: CCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CAA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGCTGGGGTGTGCAGGGTaGCAGGTCAGAAGCAGGACT | + |
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Preference number: 3 (lower is better) Translates to: SWAHGGVKCSDPSALRELLGCAG*QVRSRT Trigger: AGTCCTGCTTCTGACCTGCAACCCTGCACACCCCAG...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CAA 90 bp | TTCATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAACTGGGGTGTGCAGGGTaGCAGGTCAGAAGCAGGACT | + |
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Preference number: 3 (lower is better) Translates to: FMPRASIPSISWAHGGVKLGCAG*QVRSRT Trigger: AGTCCTGCTTCTGACCTGCAACCCTGCACACCCCAG...TTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR TCA 72 bp | CCTGGGGCCATTCTGTCTTGTGGGCTCTTTAATAGCTaGATGACGGGCACAGCCAGAAAAGGGTTAGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: PGAILSCGLFNS*MTGTARKGLGP Trigger: GGGACCTAACCCTTTTCTGGCTGTGCCCGTCATTCAGCTATTAAAGAGCCCACAAGACAGAATGGCCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR-3UTR CAA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGCTGGGGTGTGCAGGGTaGCAGGTCAGAAGCAGGACT | + |
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Preference number: 3 (lower is better) Translates to: AHKGFICQRASRQAEVRMLGCAG*QVRSRT Trigger: AGTCCTGCTTCTGACCTGCAACCCTGCACACCCCAG...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR CCA 72 bp | TCTTTCATGCCAAGAGCATCCATCCCCAGCATATCCTaGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: SFMPRASIPSIS*AHGGVKCSDPS Trigger: AGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCATGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| 3UTR TCA 72 bp | AGCAGACAGGCAGAGGTCAGAATGTTAGTTAGAAACTaGAGGAATGACTGCTGTAGCCACTGTGCCCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SRQAEVRMLVRN*RNDCCSHCAQP Trigger: TGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTCAGTTTCTAACTAACATTCTGACCTCTGCCTGTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR CCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGTCCCGTAGGGAGTGCTaGGGCCCAGCTCGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVSRREC*GPARWL Trigger: CAGCCAGCGAGCTGGGCCCCAGCACTCCCTACGGGA...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR GCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGGCACTGGGGTTGGGCTaGAGCAGCACCTCGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVALGLG*SSTSVC Trigger: GCAGACCGAGGTGCTGCTGCAGCCCAACCCCAGTGC...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR CCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGTCCCGTAGGGAGTGCTaGGGCCCAGCTCGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLWLTLLVSCHTPSPACVSRREC*GPARWL Trigger: CAGCCAGCGAGCTGGGCCCCAGCACTCCCTACGGGA...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR CCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGTCGAGTCCCACTGGCTaGGGGAGCCACCTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVSSPTG*GSHLLQ Trigger: CTGGAGGAGGTGGCTCCCCCAGCCAGTGGGACTCGA...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR TCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGACTGCACCGCCCGAGTaGAGAAGATGCCCGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLWLTLLVSCHTPSPACVTAPPE*RRCPRP Trigger: CGGACGCGGGCATCTTCTTCACTCGGGCGGTGCAGT...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | TGTGCAGGGTTGCAGGTCAGAAGCAGGACTAGCAGAGGGGCCTGGGGCCATTCTACTGCACCGCCCGAGTaGAGAAGATGCCCGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CAGLQVRSRTSRGAWGHSTAPPE*RRCPRP Trigger: CGGACGCGGGCATCTTCTTCACTCGGGCGGTGCAGT...AGAATGGCCCCAGGCCCCTCTGCTAGTCCTGCTTCTGACCTGCAACCCTGCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | AGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATACTGCACCGCCCGAGTaGAGAAGATGCCCGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPACVLLSPSTFHSQKADTAPPE*RRCPRP Trigger: CGGACGCGGGCATCTTCTTCACTCGGGCGGTGCAGT...ATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | AGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATCGCAGTGGTGGTAGGTaGGGTGCTGCTCAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPACVLLSPSTFHSQKADRSGGR*GAAQGW Trigger: CCACCCCTGAGCAGCACCTCACCTACCACCACTGCG...ATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGGCACTGGGGTTGGGCTaGAGCAGCACCTCGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLWLTLLVSCHTPSPACVALGLG*SSTSVC Trigger: GCAGACCGAGGTGCTGCTGCAGCCCAACCCCAGTGC...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGGCCCAGCTCGCTGGCTaGCTCCGCCATGTACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLWLTLLVSCHTPSPACVAQLAG*LRHVLS Trigger: GCTCAGTACATGGCGGAGGCAGCCAGCGAGCTGGGC...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCTTCCCGTAGGGAGTaGTGGGGCCCAGCTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLSSRRE*WGPARW Trigger: CCAGCGAGCTGGGCCCCAGCACTCCCTACGGGAAGA...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | CTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCCTCGAGCACTGGGGTTaGGCTGCAGCAGCACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLLVSCHTPSPACVLLSLEHWG*AAAAPR Trigger: CCGAGGTGCTGCTGCAGCCCAACCCCAGTGCTCGAG...GGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCCTCGAGCACTGGGGTTaGGCTGCAGCAGCACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FPATLLALPVCCCPPQPSLEHWG*AAAAPR Trigger: CCGAGGTGCTGCTGCAGCCCAACCCCAGTGCTCGAG...GGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGGGTTGCAGGTCAGAAGCAGGACTAGCAGAGGGGCCTGGGGCCATTCTCTCGAGCACTGGGGTTaGGCTGCAGCAGCACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CAGLQVRSRTSRGAWGHSLEHWG*AAAAPR Trigger: CCGAGGTGCTGCTGCAGCCCAACCCCAGTGCTCGAG...AGAATGGCCCCAGGCCCCTCTGCTAGTCCTGCTTCTGACCTGCAACCCTGCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGGGGAGGCAGGCTCTGTaGTGCCCACGAAGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLGRQAL*CPRRCL Trigger: CAGGCACCTTCGTGGGCACCACAGAGCCTGCCTCCC...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGGGTTGCAGGTCAGAAGCAGGACTAGCAGAGGGGCCTGGGGCCATTCTGGGAGGCAGGCTCTGTaGTGCCCACGAAGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CAGLQVRSRTSRGAWGHSGRQAL*CPRRCL Trigger: CAGGCACCTTCGTGGGCACCACAGAGCCTGCCTCCC...AGAATGGCCCCAGGCCCCTCTGCTAGTCCTGCTTCTGACCTGCAACCCTGCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGGAGGGCTGCCTCTTCTaGAGGGGCCAAGACAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLWLTLLVSCHTPSPACVEGCLF*RGQDSP Trigger: GGGGCTGTCTTGGCCCCTCCAGAAGAGGCAGCCCTC...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCGAGTCCCACTGGCTaGGGGAGCCACCTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLSSPTG*GSHLLQ Trigger: CTGGAGGAGGTGGCTCCCCCAGCCAGTGGGACTCGA...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGCCTTTCGAGTCCCACTaGCTGGGGGAGCCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVPFESH*LGEPPP Trigger: AGGAGGTGGCTCCCCCAGCCAGTGGGACTCGAAAGG...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGCGCAGTGGTGGTAGGTaGGGTGCTGCTCAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGRSGGR*GAAQGW Trigger: CCACCCCTGAGCAGCACCTCACCTACCACCACTGCG...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGAGGCAGGCTCTGTGGTaGCCACGAAGGTGCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVRQALW*PRRCLE Trigger: TTCCAGGCACCTTCGTGGGCACCACAGAGCCTGCCT...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGGCAGGGCCAGCTCACTaGTGTCAGCTGCCTCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVAGPAH*CQLPRS Trigger: ACTACGAGGCAGCTGACAGCAGTGAGCTGGCCCTGC...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGCTCGAGCACTGGGGTTaGGCTGCAGCAGCACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGLEHWG*AAAAPR Trigger: CCGAGGTGCTGCTGCAGCCCAACCCCAGTGCTCGAG...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGCCTCCACTCGAGCACTaGGGTTGGGCTGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLPPLEH*GWAAAA Trigger: TGCTGCTGCAGCCCAACCCCAGTGCTCGAGTGGAGG...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGGGTTGCAGGTCAGAAGCAGGACTAGCAGAGGGGCCTGGGGCCATTCTCCTCCACTCGAGCACTaGGGTTGGGCTGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CAGLQVRSRTSRGAWGHSPPLEH*GWAAAA Trigger: TGCTGCTGCAGCCCAACCCCAGTGCTCGAGTGGAGG...AGAATGGCCCCAGGCCCCTCTGCTAGTCCTGCTTCTGACCTGCAACCCTGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTTCCCGTAGGGAGTGCTaGGGCCCAGCTCGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLSRREC*GPARWL Trigger: CAGCCAGCGAGCTGGGCCCCAGCACTCCCTACGGGA...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGGCACCGTCGTGGCTTTaGCTTCGGCTGCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLAPSWL*LRLPWP Trigger: AGGCCAAGGCAGCCGAAGCCAAAGCCACGACGGTGC...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGGGTTGCAGGTCAGAAGCAGGACTAGCAGAGGGGCCTGGGGCCATTCTGCACCGTCGTGGCTTTaGCTTCGGCTGCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CAGLQVRSRTSRGAWGHSAPSWL*LRLPWP Trigger: AGGCCAAGGCAGCCGAAGCCAAAGCCACGACGGTGC...AGAATGGCCCCAGGCCCCTCTGCTAGTCCTGCTTCTGACCTGCAACCCTGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCCTTTCGAGTCCCACTaGCTGGGGGAGCCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLWLTLLVSCHTPSPACVPFESH*LGEPPP Trigger: AGGAGGTGGCTCCCCCAGCCAGTGGGACTCGAAAGG...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTGCCCAGCTCGCTGGCTaGCTCCGCCATGTACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLAQLAG*LRHVLS Trigger: GCTCAGTACATGGCGGAGGCAGCCAGCGAGCTGGGC...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCAAGACGCCGGTTCTaGAGGAGCCGCCTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLSRRRF*RSRLSF Trigger: GAAGGAGAGGCGGCTCCTGCAGAACCGGCGTCTTGA...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | CTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCTCAAGACGCCGGTTCTaGAGGAGCCGCCTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLLVSCHTPSPACVLLSSRRRF*RSRLSF Trigger: GAAGGAGAGGCGGCTCCTGCAGAACCGGCGTCTTGA...GGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGCGGGTCACTTCTGCCTaGCGGTCAAACTCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVRVTSA*RSNSVC Trigger: GCAGACAGAGTTTGACCGGCAGGCAGAAGTGACCCG...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGGCAGGGCCAGCTCACTaGTGTCAGCTGCCTCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLAGPAH*CQLPRS Trigger: ACTACGAGGCAGCTGACAGCAGTGAGCTGGCCCTGC...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGGGTTGCAGGTCAGAAGCAGGACTAGCAGAGGGGCCTGGGGCCATTCTGCCAGTCGGGATCCATaGCTGGCAGGCTGTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: CAGLQVRSRTSRGAWGHSASRDP*LAGCRQ Trigger: CTGTCTACAGCCTGCCAGGCATGGATCCCGACTGGC...AGAATGGCCCCAGGCCCCTCTGCTAGTCCTGCTTCTGACCTGCAACCCTGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGCCTCCACTCGAGCACTaGGGTTGGGCTGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGPPLEH*GWAAAA Trigger: TGCTGCTGCAGCCCAACCCCAGTGCTCGAGTGGAGG...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTGAGGGCTGCCTCTTCTaGAGGGGCCAAGACAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLEGCLF*RGQDSP Trigger: GGGGCTGTCTTGGCCCCTCCAGAAGAGGCAGCCCTC...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTTCGAGTCCCACTGGCTaGGGGAGCCACCTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLSSPTG*GSHLLQ Trigger: CTGGAGGAGGTGGCTCCCCCAGCCAGTGGGACTCGA...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGCCTTTCGAGTCCCACTaGCTGGGGGAGCCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGPFESH*LGEPPP Trigger: AGGAGGTGGCTCCCCCAGCCAGTGGGACTCGAAAGG...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGGAAGCCTGGGGTGTGCAACTGCACCGCCCGAGTaGAGAAGATGCCCGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VKCSDPSALRELGSLGCATAPPE*RRCPRP Trigger: CGGACGCGGGCATCTTCTTCACTCGGGCGGTGCAGT...TGCACACCCCAGGCTTCCCAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTGCCTCCGCCATGTACTaGGCCAGCAGCTCCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLASAMY*ASSSPL Trigger: CAATGGGGAGCTGCTGGCTCAGTACATGGCGGAGGC...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGCAGCTTCTGACACCTTaGTCAGCGTCTTCCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVQLLTP*SASSRR Trigger: CCTACGGGAAGACGCTGATCAAGGTGTCAGAAGCTG...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGCGAGGTCTAGTCTCCTaGAAGTCAGGCACCGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLRGLVS*KSGTVV Trigger: CACGACGGTGCCTGACTTTCAGGAGACTAGACCTCG...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 |
||
| CDS-3UTR TCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGCGAAGGTGGTTCACATaGGTACTGCTGATCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVRRWFT*VLLIPS Trigger: GGAGGGGATCAGCAGTACTCATGTGAACCACCTTCG...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGCGCAGTGGTGGTAGGTaGGGTGCTGCTCAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SWAHGGVKCSDPSALRELRSGGR*GAAQGW Trigger: CCACCCCTGAGCAGCACCTCACCTACCACCACTGCG...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGCACTGGGGTTGGGCTaGAGCAGCACCTCGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SWAHGGVKCSDPSALRELALGLG*SSTSVC Trigger: GCAGACCGAGGTGCTGCTGCAGCCCAACCCCAGTGC...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGTCAAGACGCCGGTTCTaGAGGAGCCGCCTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGSRRRF*RSRLSF Trigger: GAAGGAGAGGCGGCTCCTGCAGAACCGGCGTCTTGA...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | CTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCCGGTCAAACTCTGTCTaGGCCACTCGAAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLLVSCHTPSPACVLLSRSNSV*ATRSSC Trigger: GCAGGAGCTTCGAGTGGCGCAGACAGAGTTTGACCG...GGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGCGGGTCACTTCTGCCTaGCGGTCAAACTCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLRVTSA*RSNSVC Trigger: GCAGACAGAGTTTGACCGGCAGGCAGAAGTGACCCG...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGGCTCTGTGGTaGCCACGAAGGTGCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGRQALW*PRRCLE Trigger: TTCCAGGCACCTTCGTGGGCACCACAGAGCCTGCCT...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGCTCACTGCTGTCAGCTaGCTCGTAGTCGTAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVLTAVS*LVVVEH Trigger: GTGCTCTACGACTACGAGGCAGCTGACAGCAGTGAG...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGGCCAGTCGGGATCCATaGCTGGCAGGCTGTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGASRDP*LAGCRQ Trigger: CTGTCTACAGCCTGCCAGGCATGGATCCCGACTGGC...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGTGGCACCCTGGGAGCTaGCTAGCTGTTTCTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVWHPGS*LAVSAD Trigger: ATCTGCAGAAACAGCTAGGCAGCTCCCAGGGTGCCA...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100215.11 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGGAAGCCTGGGGTGTGCATCGAGTCCCACTGGCTaGGGGAGCCACCTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKCSDPSALRELGSLGCASSPTG*GSHLLQ Trigger: CTGGAGGAGGTGGCTCCCCCAGCCAGTGGGACTCGA...TGCACACCCCAGGCTTCCCAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGGTCGGGATCCATGCCTaGCAGGCTGTAGACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVVGIHA*QAVDSD Trigger: ATCACTGTCTACAGCCTGCCAGGCATGGATCCCGAC...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGGGTTGCAGGTCAGAAGCAGGACTAGCAGAGGGGCCTGGGGCCATTCTTCCAAAGCGTGGCTTTaGCTTCGGCTGCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CAGLQVRSRTSRGAWGHSSKAWL*LRLPWP Trigger: AGGCCAAGGCAGCCGAAGCCAAAGCCACGCTTTGGA...AGAATGGCCCCAGGCCCCTCTGCTAGTCCTGCTTCTGACCTGCAACCCTGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | CACAGCCAGAAAAGGGTTAGGTCCCTTATCCTAAGCAGCTCTGTGGCCAGCAGAACTGCACCGCCCGAGTaGAGAAGATGCCCGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HSQKRVRSLILSSSVASRTAPPE*RRCPRP Trigger: CGGACGCGGGCATCTTCTTCACTCGGGCGGTGCAGT...TCTGCTGGCCACAGAGCTGCTTAGGATAAGGGACCTAACCCTTTTCTGGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR TCA 90 bp | GTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGGAAGCCTGGGGTGTGCAGCCTCCGCCATGTACTaGGCCAGCAGCTCCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VKCSDPSALRELGSLGCAASAMY*ASSSPL Trigger: CAATGGGGAGCTGCTGGCTCAGTACATGGCGGAGGC...TGCACACCCCAGGCTTCCCAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGCAGCTTCTGACACCTTaGTCAGCGTCTTCCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLQLLTP*SASSRR Trigger: CCTACGGGAAGACGCTGATCAAGGTGTCAGAAGCTG...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR TCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGCGAAGGTGGTTCACATaGGTACTGCTGATCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLRRWFT*VLLIPS Trigger: GGAGGGGATCAGCAGTACTCATGTGAACCACCTTCG...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR TCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGAGGTTGTCTGAGACTTaGCGAACTCATGGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVRLSET*RTHGGS Trigger: GCTGCCTCCATGAGTTCGTCAAGTCTCAGACAACCT...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | CACAGCCAGAAAAGGGTTAGGTCCCTTATCCTAAGCAGCTCTGTGGCCAGCAGACGCAGTGGTGGTAGGTaGGGTGCTGCTCAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSQKRVRSLILSSSVASRRSGGR*GAAQGW Trigger: CCACCCCTGAGCAGCACCTCACCTACCACCACTGCG...TCTGCTGGCCACAGAGCTGCTTAGGATAAGGGACCTAACCCTTTTCTGGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR GCA 90 bp | AGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATCTGTCCAGTTCTTGGTaGTGTCTGCCCGAGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPACVLLSPSTFHSQKADLSSSW*CLPELG Trigger: TCCTAGCTCGGGCAGACAGCACCAAGAACTGGACAG...ATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR GCA 90 bp | TTCATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAAGCCCAGCTCGCTGGCTaGCTCCGCCATGTACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FMPRASIPSISWAHGGVKAQLAG*LRHVLS Trigger: GCTCAGTACATGGCGGAGGCAGCCAGCGAGCTGGGC...TTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR GCA 90 bp | TTCATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATCTTCCCGTAGGGAGTaGTGGGGCCCAGCTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FMPRASIPSISWAHGGVKSSRRE*WGPARW Trigger: CCAGCGAGCTGGGCCCCAGCACTCCCTACGGGAAGA...TTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTTCAAGACGCCGGTTCTaGAGGAGCCGCCTCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLSRRRF*RSRLSF Trigger: GAAGGAGAGGCGGCTCCTGCAGAACCGGCGTCTTGA...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGGAGACGGGTCACTTCTaGCTGCCGGTCAAACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLETGHF*LPVKLC Trigger: ACAGAGTTTGACCGGCAGGCAGAAGTGACCCGTCTC...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | AGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGAGACGGGTCACTTCTaGCTGCCGGTCAAACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPACVLLSPSTFHSQKADETGHF*LPVKLC Trigger: ACAGAGTTTGACCGGCAGGCAGAAGTGACCCGTCTC...ATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGGGTTGCAGGTCAGAAGCAGGACTAGCAGAGGGGCCTGGGGCCATTCTGAGACGGGTCACTTCTaGCTGCCGGTCAAACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CAGLQVRSRTSRGAWGHSETGHF*LPVKLC Trigger: ACAGAGTTTGACCGGCAGGCAGAAGTGACCCGTCTC...AGAATGGCCCCAGGCCCCTCTGCTAGTCCTGCTTCTGACCTGCAACCCTGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCCTAGCTGTTTCTaGAGATCCAGCATGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLWLTLLVSCHTPSPACVLPSCF*RSSMWR Trigger: CCGCCACATGCTGGATCTGCAGAAACAGCTAGGCAG...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | CTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCCTGCCTAGCTGTTTCTaGAGATCCAGCATGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLLVSCHTPSPACVLLSLPSCF*RSSMWR Trigger: CCGCCACATGCTGGATCTGCAGAAACAGCTAGGCAG...GGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | CTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCTGGTGCCCACGAAGGTaGCTGGAAATCTGCCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLLVSCHTPSPACVLLSWCPRR*LEICLA Trigger: AGCTAGGCAGATTTCCAGGCACCTTCGTGGGCACCA...GGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028214.15 ENSMUST00000113620.10 |
||
| CDS-3UTR GCA 90 bp | AGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATCTCACTGCTGTCAGCTaGCTCGTAGTCGTAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPACVLLSPSTFHSQKADLTAVS*LVVVEH Trigger: GTGCTCTACGACTACGAGGCAGCTGACAGCAGTGAG...ATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTCACTGCTGTCAGCTaGCTCGTAGTCGTAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLWLTLLVSCHTPSPACVLTAVS*LVVVEH Trigger: GTGCTCTACGACTACGAGGCAGCTGACAGCAGTGAG...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTGCCAGTCGGGATCCATaGCTGGCAGGCTGTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLASRDP*LAGCRQ Trigger: CTGTCTACAGCCTGCCAGGCATGGATCCCGACTGGC...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCTGGCACCCTGGGAGCTaGCTAGCTGTTTCTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FPATLLALPVCCCPPQPSWHPGS*LAVSAD Trigger: ATCTGCAGAAACAGCTAGGCAGCTCCCAGGGTGCCA...GGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100215.11 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | CTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCTGGTGCCCACGAAGGTaGCTGGAAATATGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLLVSCHTPSPACVLLSWCPRR*LEIWHP Trigger: AGGGTGCCATATTTCCAGGCACCTTCGTGGGCACCA...GGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100215.11 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGGGTTGCAGGTCAGAAGCAGGACTAGCAGAGGGGCCTGGGGCCATTCTTGGTGCCCACGAAGGTaGCTGGAAATATGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: CAGLQVRSRTSRGAWGHSWCPRR*LEIWHP Trigger: AGGGTGCCATATTTCCAGGCACCTTCGTGGGCACCA...AGAATGGCCCCAGGCCCCTCTGCTAGTCCTGCTTCTGACCTGCAACCCTGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100215.11 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | CTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCGCTCTGTCCAGTTCTTaGTGCTGTCTGCCCGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LTLLVSCHTPSPACVLLSALSSS*CCLPEL Trigger: TAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGC...GGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGGCTCTGTCCAGTTCTTaGTGCTGTCTGCCCGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLALSSS*CCLPEL Trigger: TAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGC...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | ATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGTCCCGTAGGGAGTGCTaGGGCCCAGCTCGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISWAHGGVKCSDPSALRESRREC*GPARWL Trigger: CAGCCAGCGAGCTGGGCCCCAGCACTCCCTACGGGA...CTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGGACTTGACGAACTCATaGAGGCAGCGAAGGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVDLTNS*RQRRWF Trigger: GAACCACCTTCGCTGCCTCCATGAGTTCGTCAAGTC...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | ATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTGGGAGGCAGGCTCTGTaGTGCCCACGAAGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MPRASIPSISWAHGGVKCGRQAL*CPRRCL Trigger: CAGGCACCTTCGTGGGCACCACAGAGCCTGCCTCCC...ACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TTCATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAAGGGAGGCAGGCTCTGTaGTGCCCACGAAGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FMPRASIPSISWAHGGVKGRQAL*CPRRCL Trigger: CAGGCACCTTCGTGGGCACCACAGAGCCTGCCTCCC...TTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | CACAGCCAGAAAAGGGTTAGGTCCCTTATCCTAAGCAGCTCTGTGGCCAGCAGATCGAGTCCCACTGGCTaGGGGAGCCACCTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSQKRVRSLILSSSVASRSSPTG*GSHLLQ Trigger: CTGGAGGAGGTGGCTCCCCCAGCCAGTGGGACTCGA...TCTGCTGGCCACAGAGCTGCTTAGGATAAGGGACCTAACCCTTTTCTGGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGCCTTTCGAGTCCCACTaGCTGGGGGAGCCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SWAHGGVKCSDPSALRELPFESH*LGEPPP Trigger: AGGAGGTGGCTCCCCCAGCCAGTGGGACTCGAAAGG...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | CTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCGTCGGGATCCATGCCTaGCAGGCTGTAGACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTLLVSCHTPSPACVLLSVGIHA*QAVDSD Trigger: ATCACTGTCTACAGCCTGCCAGGCATGGATCCCGAC...GGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | AGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTCGGGATCCATGCCTaGCAGGCTGTAGACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPACVLLSPSTFHSQKADVGIHA*QAVDSD Trigger: ATCACTGTCTACAGCCTGCCAGGCATGGATCCCGAC...ATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | CACAGCCAGAAAAGGGTTAGGTCCCTTATCCTAAGCAGCTCTGTGGCCAGCAGAGCCTCCGCCATGTACTaGGCCAGCAGCTCCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: HSQKRVRSLILSSSVASRASAMY*ASSSPL Trigger: CAATGGGGAGCTGCTGGCTCAGTACATGGCGGAGGC...TCTGCTGGCCACAGAGCTGCTTAGGATAAGGGACCTAACCCTTTTCTGGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCGCGCTTCTCAGCTTCTaGCACCTTGATCAGCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPATLLALPVCCCPPQPSALLSF*HLDQRL Trigger: AAGACGCTGATCAAGGTGTCAGAAGCTGAGAAGCGC...GGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGCTGAGGGAGGCAGTGTaGATGAAATCCCGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGLREAV*MKSRSA Trigger: AGCAGAGCGGGATTTCATTCACACTGCCTCCCTCAG...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGAGGTTGTCTGAGACTTaGCGAACTCATGGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLTLLVSCHTPSPACVLLRLSET*RTHGGS Trigger: GCTGCCTCCATGAGTTCGTCAAGTCTCAGACAACCT...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR GCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGCTGTCCAGTTCTTGGTaGTGTCTGCCCGAGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGLSSSW*CLPELG Trigger: TCCTAGCTCGGGCAGACAGCACCAAGAACTGGACAG...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | ATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGGCACTGGGGTTGGGCTaGAGCAGCACCTCGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISWAHGGVKCSDPSALREALGLG*SSTSVC Trigger: GCAGACCGAGGTGCTGCTGCAGCCCAACCCCAGTGC...CTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | ATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGTCTTCCCGTAGGGAGTaGTGGGGCCCAGCTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISWAHGGVKCSDPSALRESSRRE*WGPARW Trigger: CCAGCGAGCTGGGCCCCAGCACTCCCTACGGGAAGA...CTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTCGGTCAAACTCTGTCTaGGCCACTCGAAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLRSNSV*ATRSSC Trigger: GCAGGAGCTTCGAGTGGCGCAGACAGAGTTTGACCG...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGTGGTGCCCACGAAGGTaGCTGGAAATCTGCCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGWCPRR*LEICLA Trigger: AGCTAGGCAGATTTCCAGGCACCTTCGTGGGCACCA...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028214.15 ENSMUST00000113620.10 |
||
| CDS-3UTR GCA 90 bp | GCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTAGGCAGGCTCTGTGGTaGCCACGAAGGTGCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASIPSISWAHGGVKCSDPRQALW*PRRCLE Trigger: TTCCAGGCACCTTCGTGGGCACCACAGAGCCTGCCT...AGGGTCACTACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR GCA 90 bp | GTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGGAAGCCTGGGGTGTGCAAGGCAGGCTCTGTGGTaGCCACGAAGGTGCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKCSDPSALRELGSLGCARQALW*PRRCLE Trigger: TTCCAGGCACCTTCGTGGGCACCACAGAGCCTGCCT...TGCACACCCCAGGCTTCCCAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR GCA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGCAGGGCCAGCTCACTaGTGTCAGCTGCCTCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SWAHGGVKCSDPSALRELAGPAH*CQLPRS Trigger: ACTACGAGGCAGCTGACAGCAGTGAGCTGGCCCTGC...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR GCA 90 bp | GCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTGCCAGTCGGGATCCATaGCTGGCAGGCTGTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ASIPSISWAHGGVKCSDPASRDP*LAGCRQ Trigger: CTGTCTACAGCCTGCCAGGCATGGATCCCGACTGGC...AGGGTCACTACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR CCA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGAGGAGGTTTTCAAAGTaGGCGTCAAGCTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VATVPSQSHEGSGRQHLVRRFSK*ASSSVF Trigger: GAAGACGGAGCTTGACGCCCACTTTGAAAACCTCCT...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR CCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGGCTCTGTCCAGTTCTTaGTGCTGTCTGCCCGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGALSSS*CCLPEL Trigger: TAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGC...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR CCA 90 bp | ATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTCCTCCACTCGAGCACTaGGGTTGGGCTGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MPRASIPSISWAHGGVKCPPLEH*GWAAAA Trigger: TGCTGCTGCAGCCCAACCCCAGTGCTCGAGTGGAGG...ACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR CCA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGCCTCACACGTGGCTTTaGCTTCGGCTGCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SWAHGGVKCSDPSALRELPHTWL*LRLPWP Trigger: AGGCCAAGGCAGCCGAAGCCAAAGCCACGTGTGAGG...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113621.10 |
||
| CDS-3UTR TCA 90 bp | ATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGGCCTCCGCCATGTACTaGGCCAGCAGCTCCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ISWAHGGVKCSDPSALREASAMY*ASSSPL Trigger: CAATGGGGAGCTGCTGGCTCAGTACATGGCGGAGGC...CTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR TCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTCTGAGGGAGGCAGTGTaGATGAAATCCCGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLLREAV*MKSRSA Trigger: AGCAGAGCGGGATTTCATTCACACTGCCTCCCTCAG...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGCGAGGTCTAGTCTCCTaGAAGTCAGGCACCGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWAHGGVKCSDPSALRELRGLVS*KSGTVV Trigger: CACGACGGTGCCTGACTTTCAGGAGACTAGACCTCG...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 |
||
| CDS-3UTR TCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTCGAGGTCTAGTCTCCTaGAAGTCAGGCACCGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLRGLVS*KSGTVS Trigger: CGATACGGTGCCTGACTTTCAGGAGACTAGACCTCG...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113621.10 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGCGGTCAAACTCTGTCTaGGCCACTCGAAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SWAHGGVKCSDPSALRELRSNSV*ATRSSC Trigger: GCAGGAGCTTCGAGTGGCGCAGACAGAGTTTGACCG...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGGAAGCCTGGGGTGTGCACGGTCAAACTCTGTCTaGGCCACTCGAAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VKCSDPSALRELGSLGCARSNSV*ATRSSC Trigger: GCAGGAGCTTCGAGTGGCGCAGACAGAGTTTGACCG...TGCACACCCCAGGCTTCCCAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGGGTTGCAGGTCAGAAGCAGGACTAGCAGAGGGGCCTGGGGCCATTCTGTGGCGGTAGCACTGTaGATAGTAGGTTGTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CAGLQVRSRTSRGAWGHSVAVAL*IVGCLR Trigger: TCTCAGACAACCTACTATGCACAGTGCTACCGCCAC...AGAATGGCCCCAGGCCCCTCTGCTAGTCCTGCTTCTGACCTGCAACCCTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | CACAGCCAGAAAAGGGTTAGGTCCCTTATCCTAAGCAGCTCTGTGGCCAGCAGAGCAGGGCCAGCTCACTaGTGTCAGCTGCCTCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSQKRVRSLILSSSVASRAGPAH*CQLPRS Trigger: ACTACGAGGCAGCTGACAGCAGTGAGCTGGCCCTGC...TCTGCTGGCCACAGAGCTGCTTAGGATAAGGGACCTAACCCTTTTCTGGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | CACAGCCAGAAAAGGGTTAGGTCCCTTATCCTAAGCAGCTCTGTGGCCAGCAGAGCCAGTCGGGATCCATaGCTGGCAGGCTGTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: HSQKRVRSLILSSSVASRASRDP*LAGCRQ Trigger: CTGTCTACAGCCTGCCAGGCATGGATCCCGACTGGC...TCTGCTGGCCACAGAGCTGCTTAGGATAAGGGACCTAACCCTTTTCTGGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGAGGAGGTTTTCAAAGTaGGCGTCAAGCTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLWLTLLVSCHTPSPACVRRFSK*ASSSVF Trigger: GAAGACGGAGCTTGACGCCCACTTTGAAAACCTCCT...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCAGGAGGTTTTCAAAGTaGGCGTCAAGCTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPATLLALPVCCCPPQPSRRFSK*ASSSVF Trigger: GAAGACGGAGCTTGACGCCCACTTTGAAAACCTCCT...GGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGTCCCGTAGGGAGTGCTaGGGCCCAGCTCGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMSRREC*GPARWL Trigger: CAGCCAGCGAGCTGGGCCCCAGCACTCCCTACGGGA...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGAAAGCGCGGAGGCGCTaGCCGATAGAATGTAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLWLTLLVSCHTPSPACVKARRR*PIECNY Trigger: GTAATTACATTCTATCGGCCAGCGCCTCCGCGCTTT...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113621.10 |
||
| CDS-3UTR CCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGGACTTGACGAACTCATaGAGGCAGCGAAGGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGDLTNS*RQRRWF Trigger: GAACCACCTTCGCTGCCTCCATGAGTTCGTCAAGTC...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTCAGCTTCTGACACCTTaGTCAGCGTCTTCCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASIPSISWAHGGVKCSDPQLLTP*SASSRR Trigger: CCTACGGGAAGACGCTGATCAAGGTGTCAGAAGCTG...AGGGTCACTACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTGCGCTTCTCAGCTTCTaGCACCTTGATCAGCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLALLSF*HLDQRL Trigger: AAGACGCTGATCAAGGTGTCAGAAGCTGAGAAGCGC...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGCGAAGGTGGTTCACATaGGTACTGCTGATCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SWAHGGVKCSDPSALRELRRWFT*VLLIPS Trigger: GGAGGGGATCAGCAGTACTCATGTGAACCACCTTCG...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGCTGTCCAGTTCTTGGTaGTGTCTGCCCGAGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SWAHGGVKCSDPSALRELLSSSW*CLPELG Trigger: TCCTAGCTCGGGCAGACAGCACCAAGAACTGGACAG...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | ATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGAGCAGCACCTCGGTCTaGCTCAGGATCCGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISWAHGGVKCSDPSALRESSTSV*LRIRSV Trigger: GACAGAGCGGATCCTGAGGCAGACCGAGGTGCTGCT...CTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGGCCCAGCTCGCTGGCTaGCTCCGCCATGTACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMAQLAG*LRHVLS Trigger: GCTCAGTACATGGCGGAGGCAGCCAGCGAGCTGGGC...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGTCTTCCCGTAGGGAGTaGTGGGGCCCAGCTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMSSRRE*WGPARW Trigger: CCAGCGAGCTGGGCCCCAGCACTCCCTACGGGAAGA...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTCGGGTCACTTCTGCCTaGCGGTCAAACTCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MPRASIPSISWAHGGVKCRVTSA*RSNSVC Trigger: GCAGACAGAGTTTGACCGGCAGGCAGAAGTGACCCG...ACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGGAAGCCTGGGGTGTGCAGAGACGGGTCACTTCTaGCTGCCGGTCAAACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VKCSDPSALRELGSLGCAETGHF*LPVKLC Trigger: ACAGAGTTTGACCGGCAGGCAGAAGTGACCCGTCTC...TGCACACCCCAGGCTTCCCAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGGTGGCGGTAGCACTGTaGATAGTAGGTTGTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGMTAVATVPSQSHEGSGVAVAL*IVGCLR Trigger: TCTCAGACAACCTACTATGCACAGTGCTACCGCCAC...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGGAAGCCTGGGGTGTGCACTGCCTAGCTGTTTCTaGAGATCCAGCATGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VKCSDPSALRELGSLGCALPSCF*RSSMWR Trigger: CCGCCACATGCTGGATCTGCAGAAACAGCTAGGCAG...TGCACACCCCAGGCTTCCCAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGGAAGCCTGGGGTGTGCACTCACTGCTGTCAGCTaGCTCGTAGTCGTAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKCSDPSALRELGSLGCALTAVS*LVVVEH Trigger: GTGCTCTACGACTACGAGGCAGCTGACAGCAGTGAG...TGCACACCCCAGGCTTCCCAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | ATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGGCAGGGCCAGCTCACTaGTGTCAGCTGCCTCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISWAHGGVKCSDPSALREAGPAH*CQLPRS Trigger: ACTACGAGGCAGCTGACAGCAGTGAGCTGGCCCTGC...CTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGGAGGGCTGCCTCTTCTaGAGGGGCCAAGACAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMEGCLF*RGQDSP Trigger: GGGGCTGTCTTGGCCCCTCCAGAAGAGGCAGCCCTC...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGTCGGGATCCATGCCTaGCAGGCTGTAGACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SWAHGGVKCSDPSALRELVGIHA*QAVDSD Trigger: ATCACTGTCTACAGCCTGCCAGGCATGGATCCCGAC...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TTCATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATCCAAAGCGTGGCTTTaGCTTCGGCTGCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FMPRASIPSISWAHGGVKSKAWL*LRLPWP Trigger: AGGCCAAGGCAGCCGAAGCCAAAGCCACGCTTTGGA...TTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGGCCTCCGCCATGTACTaGGCCAGCAGCTCCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMASAMY*ASSSPL Trigger: CAATGGGGAGCTGCTGGCTCAGTACATGGCGGAGGC...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | CACAGCCAGAAAAGGGTTAGGTCCCTTATCCTAAGCAGCTCTGTGGCCAGCAGACAGCTTCTGACACCTTaGTCAGCGTCTTCCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSQKRVRSLILSSSVASRQLLTP*SASSRR Trigger: CCTACGGGAAGACGCTGATCAAGGTGTCAGAAGCTG...TCTGCTGGCCACAGAGCTGCTTAGGATAAGGGACCTAACCCTTTTCTGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGGAAGCCTGGGGTGTGCAGCGCTTCTCAGCTTCTaGCACCTTGATCAGCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKCSDPSALRELGSLGCAALLSF*HLDQRL Trigger: AAGACGCTGATCAAGGTGTCAGAAGCTGAGAAGCGC...TGCACACCCCAGGCTTCCCAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTAGGTTGTCTGAGACTTaGCGAACTCATGGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASIPSISWAHGGVKCSDPRLSET*RTHGGS Trigger: GCTGCCTCCATGAGTTCGTCAAGTCTCAGACAACCT...AGGGTCACTACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | ATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCGGGTCACTTCTGCCTaGCGGTCAAACTCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISWAHGGVKCSDPSALRERVTSA*RSNSVC Trigger: GCAGACAGAGTTTGACCGGCAGGCAGAAGTGACCCG...CTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTCTGCCTAGCTGTTTCTaGAGATCCAGCATGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MPRASIPSISWAHGGVKCLPSCF*RSSMWR Trigger: CCGCCACATGCTGGATCTGCAGAAACAGCTAGGCAG...ACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTTGGTGCCCACGAAGGTaGCTGGAAATATGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: MPRASIPSISWAHGGVKCWCPRR*LEIWHP Trigger: AGGGTGCCATATTTCCAGGCACCTTCGTGGGCACCA...ACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100215.11 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTAGGAGGTTTTCAAAGTaGGCGTCAAGCTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLRRFSK*ASSSVF Trigger: GAAGACGGAGCTTGACGCCCACTTTGAAAACCTCCT...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | CACAGCCAGAAAAGGGTTAGGTCCCTTATCCTAAGCAGCTCTGTGGCCAGCAGAGCTCTGTCCAGTTCTTaGTGCTGTCTGCCCGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HSQKRVRSLILSSSVASRALSSS*CCLPEL Trigger: TAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGC...TCTGCTGGCCACAGAGCTGCTTAGGATAAGGGACCTAACCCTTTTCTGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGCCTCCACTCGAGCACTaGGGTTGGGCTGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMPPLEH*GWAAAA Trigger: TGCTGCTGCAGCCCAACCCCAGTGCTCGAGTGGAGG...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTAAAGCGCGGAGGCGCTaGCCGATAGAATGTAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: ACVLLSPSTFHSQKADVLKARRR*PIECNY Trigger: GTAATTACATTCTATCGGCCAGCGCCTCCGCGCTTT...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113621.10 |
||
| CDS-3UTR CCA 90 bp | ATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTAGGTGCCTGGAAATATaGCACCCTGGGAGCTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: MPRASIPSISWAHGGVKCRCLEI*HPGSCL Trigger: TAGGCAGCTCCCAGGGTGCCATATTTCCAGGCACCT...ACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100215.11 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TTCATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAAAGGTGCCTGGAAATATaGCACCCTGGGAGCTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FMPRASIPSISWAHGGVKRCLEI*HPGSCL Trigger: TAGGCAGCTCCCAGGGTGCCATATTTCCAGGCACCT...TTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100215.11 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | ATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTGCGCTTCTCAGCTTCTaGCACCTTGATCAGCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MPRASIPSISWAHGGVKCALLSF*HLDQRL Trigger: AAGACGCTGATCAAGGTGTCAGAAGCTGAGAAGCGC...ACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | ATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCGAAGGTGGTTCACATaGGTACTGCTGATCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISWAHGGVKCSDPSALRERRWFT*VLLIPS Trigger: GGAGGGGATCAGCAGTACTCATGTGAACCACCTTCG...CTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGTTAGTTAGATCTTCCCGTAGGGAGTaGTGGGGCCCAGCTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFICQRASRQAEVRMLVRSSRRE*WGPARW Trigger: CCAGCGAGCTGGGCCCCAGCACTCCCTACGGGAAGA...TCTAACTAACATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | ATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGGAGACGGGTCACTTCTaGCTGCCGGTCAAACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISWAHGGVKCSDPSALREETGHF*LPVKLC Trigger: ACAGAGTTTGACCGGCAGGCAGAAGTGACCCGTCTC...CTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGTGGCGGTAGCACTGTaGATAGTAGGTTGTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SWAHGGVKCSDPSALRELVAVAL*IVGCLR Trigger: TCTCAGACAACCTACTATGCACAGTGCTACCGCCAC...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTAGGAGGTTTTCAAAGTaGGCGTCAAGCTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASIPSISWAHGGVKCSDPRRFSK*ASSSVF Trigger: GAAGACGGAGCTTGACGCCCACTTTGAAAACCTCCT...AGGGTCACTACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | TTCATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAAGACTTGACGAACTCATaGAGGCAGCGAAGGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FMPRASIPSISWAHGGVKDLTNS*RQRRWF Trigger: GAACCACCTTCGCTGCCTCCATGAGTTCGTCAAGTC...TTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | CACAGCCAGAAAAGGGTTAGGTCCCTTATCCTAAGCAGCTCTGTGGCCAGCAGAGACTTGACGAACTCATaGAGGCAGCGAAGGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSQKRVRSLILSSSVASRDLTNS*RQRRWF Trigger: GAACCACCTTCGCTGCCTCCATGAGTTCGTCAAGTC...TCTGCTGGCCACAGAGCTGCTTAGGATAAGGGACCTAACCCTTTTCTGGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTGTGGCGGTAGCACTGTaGATAGTAGGTTGTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MPRASIPSISWAHGGVKCVAVAL*IVGCLR Trigger: TCTCAGACAACCTACTATGCACAGTGCTACCGCCAC...ACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGTTAGTTAGACCTTTCGAGTCCCACTaGCTGGGGGAGCCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFICQRASRQAEVRMLVRPFESH*LGEPPP Trigger: AGGAGGTGGCTCCCCCAGCCAGTGGGACTCGAAAGG...TCTAACTAACATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGCTGAGGGAGGCAGTGTaGATGAAATCCCGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMLREAV*MKSRSA Trigger: AGCAGAGCGGGATTTCATTCACACTGCCTCCCTCAG...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGCTGTCCAGTTCTTGGTaGTGTCTGCCCGAGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMLSSSW*CLPELG Trigger: TCCTAGCTCGGGCAGACAGCACCAAGAACTGGACAG...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGCTGCCTAGCTGTTTCTaGAGATCCAGCATGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMLPSCF*RSSMWR Trigger: CCGCCACATGCTGGATCTGCAGAAACAGCTAGGCAG...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGGCTCTGTCCAGTTCTTaGTGCTGTCTGCCCGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMALSSS*CCLPEL Trigger: TAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGC...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | ATATCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGAAAGCGCGGAGGCGCTaGCCGATAGAATGTAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: ISWAHGGVKCSDPSALREKARRR*PIECNY Trigger: GTAATTACATTCTATCGGCCAGCGCCTCCGCGCTTT...CTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113621.10 |
||
| CDS-3UTR CCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGGTCGGGATCCATGCCTaGCAGGCTGTAGACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMVGIHA*QAVDSD Trigger: ATCACTGTCTACAGCCTGCCAGGCATGGATCCCGAC...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGAGGTGCCTGGAAATATaGCACCCTGGGAGCTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMRCLEI*HPGSCL Trigger: TAGGCAGCTCCCAGGGTGCCATATTTCCAGGCACCT...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100215.11 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GCACACAAAGGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGAGGTTGTCTGAGACTTaGCGAACTCATGGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHKGFICQRASRQAEVRMRLSET*RTHGGS Trigger: GCTGCCTCCATGAGTTCGTCAAGTCTCAGACAACCT...CATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCCTTTGTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGTTAGTTAGACGGTCAAACTCTGTCTaGGCCACTCGAAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GFICQRASRQAEVRMLVRRSNSV*ATRSSC Trigger: GCAGGAGCTTCGAGTGGCGCAGACAGAGTTTGACCG...TCTAACTAACATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGTTAGTTAGACTGAGGGAGGCAGTGTaGATGAAATCCCGCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFICQRASRQAEVRMLVRLREAV*MKSRSA Trigger: AGCAGAGCGGGATTTCATTCACACTGCCTCCCTCAG...TCTAACTAACATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR TCA 90 bp | GGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGTTAGTTAGACGAAGGTGGTTCACATaGGTACTGCTGATCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFICQRASRQAEVRMLVRRRWFT*VLLIPS Trigger: GGAGGGGATCAGCAGTACTCATGTGAACCACCTTCG...TCTAACTAACATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGTTAGTTAGATGGCACCCTGGGAGCTaGCTAGCTGTTTCTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFICQRASRQAEVRMLVRWHPGS*LAVSAD Trigger: ATCTGCAGAAACAGCTAGGCAGCTCCCAGGGTGCCA...TCTAACTAACATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100215.11 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CCA 90 bp | GGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGTTAGTTAGAGACTTGACGAACTCATaGAGGCAGCGAAGGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFICQRASRQAEVRMLVRDLTNS*RQRRWF Trigger: GAACCACCTTCGCTGCCTCCATGAGTTCGTCAAGTC...TCTAACTAACATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR GCA 90 bp | GGATTTATTTGCCAGAGAGCAAGCAGACAGGCAGAGGTCAGAATGTTAGTTAGAGTGGCGGTAGCACTGTaGATAGTAGGTTGTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFICQRASRQAEVRMLVRVAVAL*IVGCLR Trigger: TCTCAGACAACCTACTATGCACAGTGCTACCGCCAC...TCTAACTAACATTCTGACCTCTGCCTGTCTGCTTGCTCTCTGGCAAATAAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS TCA 90 bp | AATCCCGCTCTGCTGCTCCGAGGCGCTTCTCAGCTTCTGACACCTTaGTCAGCGTCTTCCCGTAGGGAGTGCTGGGGCCCAGCTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NPALLLRGASQLLTP*SASSRRECWGPARW Trigger: CCAGCGAGCTGGGCCCCAGCACTCCCTACGGGAAGACGCTGATCAAGGTGTCAGAAGCTGAGAAGCGCCTCGGAGCAGCAGAGCGGGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS GCA 90 bp | TCCTCCACTCGAGCACTGGGGTTGGGCTGCAGCAGCACCTCGGTCTaGCTCAGGATCCGCTCTGTCCAGTTCTTGGTGCTGTCTGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSTRALGLGCSSTSV*LRIRSVQFLVLSAR Trigger: TCGGGCAGACAGCACCAAGAACTGGACAGAGCGGATCCTGAGGCAGACCGAGGTGCTGCTGCAGCCCAACCCCAGTGCTCGAGTGGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS GCA 90 bp | GCGTGGCTTTGGCTTCGGCTGCCTTGGCCTTCTTTAGCCGGGCTTTaGAGGCATCCAGGTCAAGACGCCGGTTCTGCAGGAGCCGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AWLWLRLPWPSLAGL*RHPGQDAGSAGAAS Trigger: AGAGGCGGCTCCTGCAGAACCGGCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGGCCAGCAGCTCCCCATaGGTGACTCTCGAGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: WLTLLVSCHTPSPACVLLASSSP*VTLEGT Trigger: GGTGCCCTCGAGAGTCACCAATGGGGAGCTGCTGGC...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS GCA 90 bp | TCGTGGCTTTGGCTTCGGCTGCCTTGGCCTTCTTTAGCCGGGCTTTaGAGGCATCCAGGTCAAGACGCCGGTTCTGCAGGAGCCGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWLWLRLPWPSLAGL*RHPGQDAGSAGAAS Trigger: AGAGGCGGCTCCTGCAGAACCGGCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 |
||
| CDS GCA 90 bp | ACGTGGCTTTGGCTTCGGCTGCCTTGGCCTTCTTTAGCCGGGCTTTaGAGGCATCCAGGTCAAGACGCCGGTTCTGCAGGAGCCGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TWLWLRLPWPSLAGL*RHPGQDAGSAGAAS Trigger: AGAGGCGGCTCCTGCAGAACCGGCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113621.10 |
||
| CDS CCA 90 bp | CAGGCACCGTATCGCCCTCACACGTGGCTTTGGCTTCGGCTGCCTTaGCCTTCTTTAGCCGGGCTTTGCAGGCATCCAGGTCAAGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: QAPYRPHTWLWLRLP*PSLAGLCRHPGQDA Trigger: GGCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGTGTGAGGGCGATACGGTGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113621.10 |
||
| CDS-3UTR CAA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGCGCTCTGTCCAGTTCTaGGTGCTGTCTGCCCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VATVPSQSHEGSGRQHLVRSVQF*VLSARA Trigger: AGCTCGGGCAGACAGCACCAAGAACTGGACAGAGCG...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGACTCGAGCACTGGGGTaGGGCTGCAGCAGCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EGMTAVATVPSQSHEGSGTRALG*GCSSTS Trigger: CGAGGTGCTGCTGCAGCCCAACCCCAGTGCTCGAGT...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCCGCTCTGTCCAGTTCTaGGTGCTGTCTGCCCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPATLLALPVCCCPPQPSRSVQF*VLSARA Trigger: AGCTCGGGCAGACAGCACCAAGAACTGGACAGAGCG...GGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | CTGCTCTGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCGCTCTGTCCAGTTCTaGGTGCTGTCTGCCCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLWLTLLVSCHTPSPACVRSVQF*VLSARA Trigger: AGCTCGGGCAGACAGCACCAAGAACTGGACAGAGCG...CACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCAGAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS TCA 90 bp | GTGAATGAAATCCCGCTCTGCTGCTCCGAGGCGCTTCTCAGCTTCTaGCACCTTGATCAGCGTCTTCCCGTAGGGAGTGCTGGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VNEIPLCCSEALLSF*HLDQRLPVGSAGAQ Trigger: CTGGGCCCCAGCACTCCCTACGGGAAGACGCTGATCAAGGTGTCAGAAGCTGAGAAGCGCCTCGGAGCAGCAGAGCGGGATTTCATTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS GCA 90 bp | ACTTCTGCCTGCCGGTCAAACTCTGTCTGCGCCACTCGAAGCTCCTaGTCAGCCTTGTCGACTTCATCGTTCCAAAGCGCGGAGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSACRSNSVCATRSS*SALSTSSFQSAEAL Trigger: CAGCGCCTCCGCGCTTTGGAACGATGAAGTCGACAAGGCTGAGCAGGAGCTTCGAGTGGCGCAGACAGAGTTTGACCGGCAGGCAGAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113621.10 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGCCAGCAGCTCCCCATaGGTGACTCTCGAGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SWAHGGVKCSDPSALRELASSSP*VTLEGT Trigger: GGTGCCCTCGAGAGTCACCAATGGGGAGCTGCTGGC...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | GTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGGAAGCCTGGGGTGTGCAGCCAGCAGCTCCCCATaGGTGACTCTCGAGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VKCSDPSALRELGSLGCAASSSP*VTLEGT Trigger: GGTGCCCTCGAGAGTCACCAATGGGGAGCTGCTGGC...TGCACACCCCAGGCTTCCCAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS GCA 90 bp | GCAGCACCTCGGTCTGCCTCAGGATCCGCTCTGTCCAGTTCTTGGTaGTGTCTGCCCGAGCTAGGAGGTTTTCAAAGTGGGCGTCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAPRSASGSALSSSW*CLPELGGFQSGRQA Trigger: AGCTTGACGCCCACTTTGAAAACCTCCTAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGCGGATCCTGAGGCAGACCGAGGTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS GCA 90 bp | TCCAGCAGGAGACGGGTCACTTCTGCCTGCCGGTCAAACTCTGTCTaGGCCACTCGAAGCTCCTGCTCAGCCTTGTCGACTTCATCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSRRRVTSACRSNSV*ATRSSCSALSTSSF Trigger: GAACGATGAAGTCGACAAGGCTGAGCAGGAGCTTCGAGTGGCGCAGACAGAGTTTGACCGGCAGGCAGAAGTGACCCGTCTCCTGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS CCA 90 bp | GCAGCAGCACCTCGGTCTGCCTCAGGATCCGCTCTGTCCAGTTCTTaGTGCTGTCTGCCCGAGCTAGGAGGTTTTCAAAGTGGGCGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: AAAPRSASGSALSSS*CCLPELGGFQSGRQ Trigger: TTGACGCCCACTTTGAAAACCTCCTAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGCGGATCCTGAGGCAGACCGAGGTGCTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | GCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGTTCTTCGCTCTGTCCAGTTCTaGGTGCTGTCTGCCCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ACVLLSPSTFHSQKADVLRSVQF*VLSARA Trigger: AGCTCGGGCAGACAGCACCAAGAACTGGACAGAGCG...AAGAACATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | ATGCCAAGAGCATCCATCCCCAGCATATCCTGGGCCCATGGTGGTGTCAAATGTGCCAGCAGCTCCCCATaGGTGACTCTCGAGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: MPRASIPSISWAHGGVKCASSSP*VTLEGT Trigger: GGTGCCCTCGAGAGTCACCAATGGGGAGCTGCTGGC...ACATTTGACACCACCATGGGCCCAGGATATGCTGGGGATGGATGCTCTTGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | GTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGAGGCAGCACTTGGTGGGAACCTTGCCCTTCTaGTTGCCTCTCTCACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VATVPSQSHEGSGRQHLVGTLPF*LPLSPM Trigger: CATTGGTGAGAGAGGCAACAAGAAGGGCAAGGTTCC...CACCAAGTGCTGCCTCCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS CCA 90 bp | TGTCGACTTCATCGTTCCAAAGCGTGGCTTTGGCTTCGGCTGCCTTaGCCTTCTTTAGCCGGGCTTTGCAGGCATCCAGGTCAAGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: CRLHRSKAWLWLRLP*PSLAGLCRHPGQDA Trigger: GGCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGCTTTGGAACGATGAAGTCGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
||
| CDS CCA 90 bp | GCTCCTGCTCAGCCTTGTCGACTTCATCGTTCCAAAGCGTGGCTTTaGCTTCGGCTGCCTTGGCCTTCTTTAGCCGGGCTTTGCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: APAQPCRLHRSKAWL*LRLPWPSLAGLCRH Trigger: ATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGCTTTGGAACGATGAAGTCGACAAGGCTGAGCAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | CTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCTTCTTTAGCCGGGCTTaGCAGGCATCCAGGTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LTLLVSCHTPSPACVLLSFFSRA*QASRSR Trigger: TCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAA...GGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTTCTTTAGCCGGGCTTaGCAGGCATCCAGGTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WLTLLVSCHTPSPACVLLFFSRA*QASRSR Trigger: TCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAA...CAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCTTCTTTAGCCGGGCTTaGCAGGCATCCAGGTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FPATLLALPVCCCPPQPSFFSRA*QASRSR Trigger: TCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAA...GGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR CAA 90 bp | CTGACCCTTCTGGTTTCCTGCCACACTCCTAGCCCTGCCTGTGTGCTGCTGTCCGGAACCTTGCCCTTCTaGTTGCCTCTCTCACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LTLLVSCHTPSPACVLLSGTLPF*LPLSPM Trigger: CATTGGTGAGAGAGGCAACAAGAAGGGCAAGGTTCC...GGACAGCAGCACACAGGCAGGGCTAGGAGTGTGGCAGGAAACCAGAAGGGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR CAA 90 bp | AGCCCTGCCTGTGTGCTGCTGTCCCCCTCAACCTTCCACAGCCAGAAGGCAGATGGAACCTTGCCCTTCTaGTTGCCTCTCTCACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SPACVLLSPSTFHSQKADGTLPF*LPLSPM Trigger: CATTGGTGAGAGAGGCAACAAGAAGGGCAAGGTTCC...ATCTGCCTTCTGGCTGTGGAAGGTTGAGGGGGACAGCAGCACACAGGCAGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS GCA 90 bp | ACTTCTGCCTGCCGGTCAAACTCTGTCTGCGCCACTCGAAGCTCCTaGTCAGCCTTGTCGACTTCATCGTTCCAAAGCGTGGCTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSACRSNSVCATRSS*SALSTSSFQSVALA Trigger: AGCCAAAGCCACGCTTTGGAACGATGAAGTCGACAAGGCTGAGCAGGAGCTTCGAGTGGCGCAGACAGAGTTTGACCGGCAGGCAGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | GAAGGAATGACTGCTGTAGCCACTGTGCCCAGCCAGAGCCATGAGGGAAGTGGGGGAACCTTGCCCTTCTaGTTGCCTCTCTCACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: EGMTAVATVPSQSHEGSGGTLPF*LPLSPM Trigger: CATTGGTGAGAGAGGCAACAAGAAGGGCAAGGTTCC...CCCACTTCCCTCATGGCTCTGGCTGGGCACAGTGGCTACAGCAGTCATTCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGCCCATGGTGGTGTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGTTCTTTAGCCGGGCTTaGCAGGCATCCAGGTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SWAHGGVKCSDPSALRELFFSRA*QASRSR Trigger: TCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAA...CAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGACACCACCATGGGCCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS-3UTR CAA 90 bp | GTCAAATGTAGTGACCCTTCTGCCTTAAGGGAGCTGGGAAGCCTGGGGTGTGCAGGAACCTTGCCCTTCTaGTTGCCTCTCTCACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VKCSDPSALRELGSLGCAGTLPF*LPLSPM Trigger: CATTGGTGAGAGAGGCAACAAGAAGGGCAAGGTTCC...TGCACACCCCAGGCTTCCCAGCTCCCTTAAGGCAGAAGGGTCACTACATTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS TCA 72 bp | CTGGGGCCCAGCTCGCTGGCTGCCTCCGCCATGTACTaGGCCAGCAGCTCCCCATTGGTGACTCTCGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGPSSLAASAMY*ASSSPLVTLEG Trigger: GCCCTCGAGAGTCACCAATGGGGAGCTGCTGGCTCAGTACATGGCGGAGGCAGCCAGCGAGCTGGGCCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS CAA 90 bp | GTCGTGGCTTTGGCTTCGGCTGCCTTGGCCTTCTTTAGCCGGGCTTaGCAGGCATCCAGGTCAAGACGCCGGTTCTGCAGGAGCCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VVALASAALAFFSRA*QASRSRRRFCRSRL Trigger: GAGGCGGCTCCTGCAGAACCGGCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 |
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| CDS CAA 90 bp | CACGTGGCTTTGGCTTCGGCTGCCTTGGCCTTCTTTAGCCGGGCTTaGCAGGCATCCAGGTCAAGACGCCGGTTCTGCAGGAGCCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HVALASAALAFFSRA*QASRSRRRFCRSRL Trigger: GAGGCGGCTCCTGCAGAACCGGCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113621.10 |
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| CDS CAA 90 bp | AGCGTGGCTTTGGCTTCGGCTGCCTTGGCCTTCTTTAGCCGGGCTTaGCAGGCATCCAGGTCAAGACGCCGGTTCTGCAGGAGCCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SVALASAALAFFSRA*QASRSRRRFCRSRL Trigger: GAGGCGGCTCCTGCAGAACCGGCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
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| CDS TCA 72 bp | CTGCTGCTCCGAGGCGCTTCTCAGCTTCTGACACCTTaGTCAGCGTCTTCCCGTAGGGAGTGCTGGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLRGASQLLTP*SASSRRECWGP Trigger: TGGGCCCCAGCACTCCCTACGGGAAGACGCTGATCAAGGTGTCAGAAGCTGAGAAGCGCCTCGGAGCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS CAA 90 bp | TCAGGCACCGTATCGCCCTCACACGTGGCTTTGGCTTCGGCTGCCTaGGCCTTCTTTAGCCGGGCTTTGCAGGCATCCAGGTCAAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: SGTVSPSHVALASAA*AFFSRALQASRSRR Trigger: GCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGTGTGAGGGCGATACGGTGCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113621.10 |
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| CDS TCA 72 bp | TTCCGCAGGGGTGTGAGGAAGCTGAGGGAGGCAGTGTaGATGAAATCCCGCTCTGCTGCTCCGAGGCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FRRGVRKLREAV*MKSRSAAPRRF Trigger: GAAGCGCCTCGGAGCAGCAGAGCGGGATTTCATTCACACTGCCTCCCTCAGCTTCCTCACACCCCTGCGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS GCA 72 bp | TATAGGAACTCCTCCACTCGAGCACTGGGGTTGGGCTaGAGCAGCACCTCGGTCTGCCTCAGGATCCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: YRNSSTRALGLG*SSTSVCLRIRS Trigger: AGAGCGGATCCTGAGGCAGACCGAGGTGCTGCTGCAGCCCAACCCCAGTGCTCGAGTGGAGGAGTTCCTATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS GCA 72 bp | TGGCTTCGGCTGCCTTGGCCTTCTTTAGCCGGGCTTTaGAGGCATCCAGGTCAAGACGCCGGTTCTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WLRLPWPSLAGL*RHPGQDAGSAG Trigger: TCCTGCAGAACCGGCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS GCA 72 bp | ACTGCTGATCCCCTCCAGCAGGAGACGGGTCACTTCTaGCTGCCGGTCAAACTCTGTCTGCGCCACTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TADPLQQETGHF*LPVKLCLRHSK Trigger: CTTCGAGTGGCGCAGACAGAGTTTGACCGGCAGGCAGAAGTGACCCGTCTCCTGCTGGAGGGGATCAGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS CCA 72 bp | AGTCAGGCACCGTCGTGGCTTTGGCTTCGGCTGCCTTaGCCTTCTTTAGCCGGGCTTTGCAGGCATCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SQAPSWLWLRLP*PSLAGLCRHPG Trigger: ACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGACGGTGCCTGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 |
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| CDS CAA 72 bp | TTGGCTTCGGCTGCCTTGGCCTTCTTTAGCCGGGCTTaGCAGGCATCCAGGTCAAGACGCCGGTTCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LASAALAFFSRA*QASRSRRRFCR Trigger: CCTGCAGAACCGGCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS CAA 72 bp | AAGTCAGGCACCGTCGTGGCTTTGGCTTCGGCTGCCTaGGCCTTCTTTAGCCGGGCTTTGCAGGCATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KSGTVVALASAA*AFFSRALQASR Trigger: CCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGACGGTGCCTGACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 |
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| CDS CAA 72 bp | GTATCGCCCTCACACGTGGCTTTGGCTTCGGCTGCCTaGGCCTTCTTTAGCCGGGCTTTGCAGGCATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VSPSHVALASAA*AFFSRALQASR Trigger: CCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGTGTGAGGGCGATAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113621.10 |
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| CDS GCA 72 bp | CGGGCTTTGCAGGCATCCAGGTCAAGACGCCGGTTCTaGAGGAGCCGCCTCTCCTTCGAAATCGTTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RALQASRSRRRF*RSRLSFEIVFQ Trigger: CTGGAAAACGATTTCGAAGGAGAGGCGGCTCCTGCAGAACCGGCGTCTTGACCTGGATGCCTGCAAAGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS GCA 72 bp | AGACGGGTCACTTCTGCCTGCCGGTCAAACTCTGTCTaGGCCACTCGAAGCTCCTGCTCAGCCTTGTCGACT | + |
|
Preference number: 6 (lower is better) Translates to: RRVTSACRSNSV*ATRSSCSALST Trigger: AGTCGACAAGGCTGAGCAGGAGCTTCGAGTGGCGCAGACAGAGTTTGACCGGCAGGCAGAAGTGACCCGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS CCA 72 bp | TATCGCCCTCACACGTGGCTTTGGCTTCGGCTGCCTTaGCCTTCTTTAGCCGGGCTTTGCAGGCATCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: YRPHTWLWLRLP*PSLAGLCRHPG Trigger: ACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGTGTGAGGGCGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113621.10 |
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| CDS CAA 90 bp | TGCAGCAGCACCTCGGTCTGCCTCAGGATCCGCTCTGTCCAGTTCTaGGTGCTGTCTGCCCGAGCTAGGAGGTTTTCAAAGTGGGCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSSTSVCLRIRSVQF*VLSARARRFSKWAS Trigger: TGACGCCCACTTTGAAAACCTCCTAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGCGGATCCTGAGGCAGACCGAGGTGCTGCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS CAA 90 bp | AGCTCCTGCTCAGCCTTGTCGACTTCATCGTTCCAAAGCGTGGCTTaGGCTTCGGCTGCCTTGGCCTTCTTTAGCCGGGCTTTGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSCSALSTSSFQSVA*ASAALAFFSRALQA Trigger: TGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGCTTTGGAACGATGAAGTCGACAAGGCTGAGCAGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
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| CDS GCA 72 bp | CGGTCTGCCTCAGGATCCGCTCTGTCCAGTTCTTGGTaGTGTCTGCCCGAGCTAGGAGGTTTTCAAAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSASGSALSSSW*CLPELGGFQSG Trigger: CCCACTTTGAAAACCTCCTAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGCGGATCCTGAGGCAGACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS GCA 72 bp | TGCCGGTCAAACTCTGTCTGCGCCACTCGAAGCTCCTaGTCAGCCTTGTCGACTTCATCGTTCCAAAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: CRSNSVCATRSS*SALSTSSFQSA Trigger: CGCGCTTTGGAACGATGAAGTCGACAAGGCTGAGCAGGAGCTTCGAGTGGCGCAGACAGAGTTTGACCGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113621.10 |
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| CDS GCA 72 bp | CCACGAAGGTGCCTGGAAATATGGCACCCTGGGAGCTaGCTAGCTGTTTCTGCAGATCCAGCATGTGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRRCLEIWHPGS*LAVSADPACGG Trigger: ACCGCCACATGCTGGATCTGCAGAAACAGCTAGGCAGCTCCCAGGGTGCCATATTTCCAGGCACCTTCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100215.11 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS CCA 72 bp | GCCTCTCTCACCAATGAGCCAGTCGGGATCCATGCCTaGCAGGCTGTAGACAGTGATGAGCTCATCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASLTNEPVGIHA*QAVDSDELISQ Trigger: CTGGCTGATGAGCTCATCACTGTCTACAGCCTGCCAGGCATGGATCCCGACTGGCTCATTGGTGAGAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS CCA 72 bp | GTGGTGCCCACGAAGGTGCCTGGAAATATGGCACCCTaGGAGCTGCCTAGCTGTTTCTGCAGATCCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: VVPTKVPGNMAP*ELPSCFCRSSM Trigger: CATGCTGGATCTGCAGAAACAGCTAGGCAGCTCCCAGGGTGCCATATTTCCAGGCACCTTCGTGGGCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100215.11 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS CCA 72 bp | CAGGCTCTGTGGTGCCCACGAAGGTGCCTGGAAATATaGCACCCTGGGAGCTGCCTAGCTGTTTCTGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QALWCPRRCLEI*HPGSCLAVSAD Trigger: ATCTGCAGAAACAGCTAGGCAGCTCCCAGGGTGCCATATTTCCAGGCACCTTCGTGGGCACCACAGAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100215.11 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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| CDS CCA 72 bp | TCTCCTGAAAGTCAGGCACCGTATCGCCCTCACACGTaGCTTTGGCTTCGGCTGCCTTGGCCTTCTTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPESQAPYRPHT*LWLRLPWPSLA Trigger: GGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGTGTGAGGGCGATACGGTGCCTGACTTTCAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113621.10 |
||
| CDS CCA 72 bp | CATCGTTCCAAAGCGTGGCTTTGGCTTCGGCTGCCTTaGCCTTCTTTAGCCGGGCTTTGCAGGCATCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HRSKAWLWLRLP*PSLAGLCRHPG Trigger: ACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGCTTTGGAACGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
||
| CDS CAA 72 bp | TCATCGTTCCAAAGCGTGGCTTTGGCTTCGGCTGCCTaGGCCTTCTTTAGCCGGGCTTTGCAGGCATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSFQSVALASAA*AFFSRALQASR Trigger: CCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGCTTTGGAACGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
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| CDS CAA 90 bp | TTGTCGACTTCATCGTTCCAAAGCGTGGCTTTGGCTTCGGCTGCCTaGGCCTTCTTTAGCCGGGCTTTGCAGGCATCCAGGTCAAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: LSTSSFQSVALASAA*AFFSRALQASRSRR Trigger: GCGTCTTGACCTGGATGCCTGCAAAGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGCTTTGGAACGATGAAGTCGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
||
| CDS GCA 72 bp | TGCCGGTCAAACTCTGTCTGCGCCACTCGAAGCTCCTaGTCAGCCTTGTCGACTTCATCGTTCCAAAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: CRSNSVCATRSS*SALSTSSFQSV Trigger: CACGCTTTGGAACGATGAAGTCGACAAGGCTGAGCAGGAGCTTCGAGTGGCGCAGACAGAGTTTGACCGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
||
| CDS CCA 72 bp | CCTCGGTCTGCCTCAGGATCCGCTCTGTCCAGTTCTTaGTGCTGTCTGCCCGAGCTAGGAGGTTTTCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PRSASGSALSSS*CCLPELGGFQS Trigger: ACTTTGAAAACCTCCTAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGCGGATCCTGAGGCAGACCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS CCA 72 bp | CCTGCTCAGCCTTGTCGACTTCATCGTTCCAAAGCGTaGCTTTGGCTTCGGCTGCCTTGGCCTTCTTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PAQPCRLHRSKA*LWLRLPWPSLA Trigger: GGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGCTTTGGAACGATGAAGTCGACAAGGCTGAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
||
| CDS CAA 72 bp | ACCTCGGTCTGCCTCAGGATCCGCTCTGTCCAGTTCTaGGTGCTGTCTGCCCGAGCTAGGAGGTTTTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TSVCLRIRSVQF*VLSARARRFSK Trigger: CTTTGAAAACCTCCTAGCTCGGGCAGACAGCACCAAGAACTGGACAGAGCGGATCCTGAGGCAGACCGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
||
| CDS CAA 72 bp | TCAGCCTTGTCGACTTCATCGTTCCAAAGCGTGGCTTaGGCTTCGGCTGCCTTGGCCTTCTTTAGCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SALSTSSFQSVA*ASAALAFFSRA Trigger: AGCCCGGCTAAAGAAGGCCAAGGCAGCCGAAGCCAAAGCCACGCTTTGGAACGATGAAGTCGACAAGGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113620.10 ENSMUST00000163668.3 |
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| CDS GCA 72 bp | CTGTTTCTGCAGATCCAGCATGTGGCGGTAGCACTGTaGATAGTAGGTTGTCTGAGACTTGACGAACTCATG | + |
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Preference number: 6 (lower is better) Translates to: LFLQIQHVAVAL*IVGCLRLDELM Trigger: CATGAGTTCGTCAAGTCTCAGACAACCTACTATGCACAGTGCTACCGCCACATGCTGGATCTGCAGAAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028214.15 ENSMUST00000100215.11 ENSMUST00000113620.10 ENSMUST00000113621.10 ENSMUST00000163668.3 |
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