Pregenerated sensors for SH3GLB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037062Ensembl transcript IDs: ENSMUST00000163279.6, ENSMUST00000198254.5, ENSMUST00000199350.5, ENSMUST00000199531.5, ENSMUST00000199854.5, ENSMUST00000200532.2
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGGGAAGCACACAGGGAAGCAGAGGGCGTGAAGCAGATCTGGCTGTaGGCCGAGCTCCCCTCCACAGCTCTTCACTCTGGCTTGTGCCAC | + |
Preference number: 1 (lower is better) Translates to: REAHREAEGVKQIWL*AELPSTALHSGLCH Trigger: GTGGCACAAGCCAGAGTGAAGAGCTGTGGAGGGGAGCTCGGCTCACAGCCAGATCTGCTTCACGCCCTCTGCTTCCCTGTGTGCTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR GCA 90 bp | CTGTCGGCCCTGCGGTGGTTCTTACAACTGACTACCGCAGGGCCATaGAAATGGCTTCCTGGACAACTGTGGGGCCCTGCTTCCAGAATT | + |
Preference number: 1 (lower is better) Translates to: LSALRWFLQLTTAGP*KWLPGQLWGPASRI Trigger: AATTCTGGAAGCAGGGCCCCACAGTTGTCCAGGAAGCCATTTGCATGGCCCTGCGGTAGTCAGTTGTAAGAACCACCGCAGGGCCGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR CCA 90 bp | TCGTTGGTGCCTGAGGGTGAATGGCCACTTCTGTCGGCCCTGCGGTaGTTCTTACAACTGACTACCGCAGGGCCATGCAAATGGCTTCCT | + |
Preference number: 1 (lower is better) Translates to: SLVPEGEWPLLSALR*FLQLTTAGPCKWLP Trigger: AGGAAGCCATTTGCATGGCCCTGCGGTAGTCAGTTGTAAGAACCACCGCAGGGCCGACAGAAGTGGCCATTCACCCTCAGGCACCAACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR TCA 90 bp | CCCTCTCTCCTCCCCGCTGCCACTTCTCCTCAGAACCATCCTTCCTaGCTAACACTAGCTTCCTTTCGCTCCTGCTTGAAGGATGGGCTG | + |
Preference number: 1 (lower is better) Translates to: PSLLPAATSPQNHPS*LTLASFRSCLKDGL Trigger: CAGCCCATCCTTCAAGCAGGAGCGAAAGGAAGCTAGTGTTAGTCAGGAAGGATGGTTCTGAGGAGAAGTGGCAGCGGGGAGGAGAGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR GCA 90 bp | AGGTGCTGGGACTGTGTGACAAAGCAGTCCTCTGTGAGAGCTCTCTaGATAAACAAGTCTGTGCCACCCTCTCTCCTCCCCGCTGCCACT | + |
Preference number: 1 (lower is better) Translates to: RCWDCVTKQSSVRAL*INKSVPPSLLPAAT Trigger: AGTGGCAGCGGGGAGGAGAGAGGGTGGCACAGACTTGTTTATGCAGAGAGCTCTCACAGAGGACTGCTTTGTCACACAGTCCCAGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR GCA 90 bp | TTCCTTTCGCTCCTGCTTGAAGGATGGGCTGTGGCAACCTGGGGATaGTGGCTTAGGCCTTATTTTCCTGCTATGAAGGATGGGCTGTGG | + |
Preference number: 1 (lower is better) Translates to: FLSLLLEGWAVATWG*WLRPYFPAMKDGLW Trigger: CCACAGCCCATCCTTCATAGCAGGAAAATAAGGCCTAAGCCAGCATCCCCAGGTTGCCACAGCCCATCCTTCAAGCAGGAGCGAAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR GCA 90 bp | GCTAACAGAGGCAAGGGGAAATGTTCAAGTGTTGTCAATCGTTGGTaGCTGAGGGTGAATGGCCACTTCTGTCGGCCCTGCGGTGGTTCT | + |
Preference number: 1 (lower is better) Translates to: ANRGKGKCSSVVNRW*LRVNGHFCRPCGGS Trigger: AGAACCACCGCAGGGCCGACAGAAGTGGCCATTCACCCTCAGGCACCAACGATTGACAACACTTGAACATTTCCCCTTGCCTCTGTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR CCA 90 bp | CTTTCGCTCCTGCTTGAAGGATGGGCTGTGGCAACCTGGGGATGCTaGCTTAGGCCTTATTTTCCTGCTATGAAGGATGGGCTGTGGCAA | + |
Preference number: 1 (lower is better) Translates to: LSLLLEGWAVATWGC*LRPYFPAMKDGLWQ Trigger: TTGCCACAGCCCATCCTTCATAGCAGGAAAATAAGGCCTAAGCCAGCATCCCCAGGTTGCCACAGCCCATCCTTCAAGCAGGAGCGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR CCA 90 bp | AAGGCTAACAGAGGCAAGGGGAAATGTTCAAGTGTTGTCAATCGTTaGTGCCTGAGGGTGAATGGCCACTTCTGTCGGCCCTGCGGTGGT | + |
Preference number: 1 (lower is better) Translates to: KANRGKGKCSSVVNR*CLRVNGHFCRPCGG Trigger: ACCACCGCAGGGCCGACAGAAGTGGCCATTCACCCTCAGGCACCAACGATTGACAACACTTGAACATTTCCCCTTGCCTCTGTTAGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR TCA 90 bp | TTTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTaGGGGTTTGTAAAGCCCATGCTGCTGTACTCCACCTCTGGATTT | + |
Preference number: 1 (lower is better) Translates to: FAQRWPTRFYTHHLP*GFVKPMLLYSTSGF Trigger: AAATCCAGAGGTGGAGTACAGCAGCATGGGCTTTACAAACCCTCAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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3UTR GCA 90 bp | GGGATCAGAGAGTTTGGATTTCTAAGACATTCTCCAGTGGTGCACTaGTGGCCAGGGAGCTGTTTCAGAACTACCGCATGCTTCACACCA | + |
Preference number: 1 (lower is better) Translates to: GIREFGFLRHSPVVH*WPGSCFRTTACFTP Trigger: TGGTGTGAAGCATGCGGTAGTTCTGAAACAGCTCCCTGGCCAGCAGTGCACCACTGGAGAATGTCTTAGAAATCCAAACTCTCTGATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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3UTR CCA 90 bp | ATCAGAGAGTTTGGATTTCTAAGACATTCTCCAGTGGTGCACTGCTaGCCAGGGAGCTGTTTCAGAACTACCGCATGCTTCACACCAGGG | + |
Preference number: 1 (lower is better) Translates to: IREFGFLRHSPVVHC*PGSCFRTTACFTPG Trigger: CCCTGGTGTGAAGCATGCGGTAGTTCTGAAACAGCTCCCTGGCCAGCAGTGCACCACTGGAGAATGTCTTAGAAATCCAAACTCTCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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3UTR TCA 90 bp | AGGGTTTGTAAAGCCCATGCTGCTGTACTCCACCTCTGGATTTCCTaGTTCTGCGGGGATCAGAGAGTTTGGATTTCTAAGACATTCTCC | + |
Preference number: 1 (lower is better) Translates to: RVCKAHAAVLHLWIS*FCGDQRVWISKTFS Trigger: GGAGAATGTCTTAGAAATCCAAACTCTCTGATCCCCGCAGAATCAGGAAATCCAGAGGTGGAGTACAGCAGCATGGGCTTTACAAACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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3UTR TCA 90 bp | AACTTCCTTTCTGAGGAAGAAAAAGAACAACAAACCTCATTCACTTaGTTCCCTAGAACACTAGCATCTCAGTTGTCTCTGGAGTCCCTC | + |
Preference number: 1 (lower is better) Translates to: NFLSEEEKEQQTSFT*FPRTLASQLSLESL Trigger: GAGGGACTCCAGAGACAACTGAGATGCTAGTGTTCTAGGGAATCAAGTGAATGAGGTTTGTTGTTCTTTTTCTTCCTCAGAAAGGAAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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3UTR TCA 90 bp | TCAGAAATCTTAACCTCAAACTTTTGGCTGTCAAATTGGCAGTTATaGAAGGGACATAAGAAATTTCCCTGTGAATGGTCCATTTCAGTA | + |
Preference number: 1 (lower is better) Translates to: SEILTSNFWLSNWQL*KGHKKFPCEWSISV Trigger: TACTGAAATGGACCATTCACAGGGAAATTTCTTATGTCCCTTTCATAACTGCCAATTTGACAGCCAAAAGTTTGAGGTTAAGATTTCTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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3UTR GCA 90 bp | ATGAACTTTGTTAGGAAGGTTCATGGGGTACAGTTAGTCCTGTTATaGACGTATAATGAGATTTCTTTAGAACATACCATGCCATTATGT | + |
Preference number: 1 (lower is better) Translates to: MNFVRKVHGVQLVLL*TYNEISLEHTMPLC Trigger: ACATAATGGCATGGTATGTTCTAAAGAAATCTCATTATACGTGCATAACAGGACTAACTGTACCCCATGAACCTTCCTAACAAAGTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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3UTR-3UTR TCA 90 bp | AGCTTCCTTTCGCTCCTGCTTGAAGGATGGGCTGTGGCAACCTGGGGATGCTGGGGAGTGTGGGCGGGGTaGGGAGGCTCTGCTCGGGTT | + |
Preference number: 2 (lower is better) Translates to: SFLSLLLEGWAVATWGCWGVWAG*GGSARV Trigger: AACCCGAGCAGAGCCTCCTCACCCCGCCCACACTCC...CCAGCATCCCCAGGTTGCCACAGCCCATCCTTCAAGCAGGAGCGAAAGGAAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR-3UTR CCA 90 bp | ACTAGCTTCCTTTCGCTCCTGCTTGAAGGATGGGCTGTGGCAACCTGGGGATGCCCGGGAGGTGGAGAATaGGCTGAAGGGGGCAAGCAC | + |
Preference number: 2 (lower is better) Translates to: TSFLSLLLEGWAVATWGCPGGGE*AEGGKH Trigger: GTGCTTGCCCCCTTCAGCCCATTCTCCACCTCCCGG...GCATCCCCAGGTTGCCACAGCCCATCCTTCAAGCAGGAGCGAAAGGAAGCTAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR-3UTR CCA 90 bp | AGCTTCCTTTCGCTCCTGCTTGAAGGATGGGCTGTGGCAACCTGGGGATGCTGGAACCAGCACTCCTGCTaGAAGCACCGGGTCCTGCTA | + |
Preference number: 2 (lower is better) Translates to: SFLSLLLEGWAVATWGCWNQHSC*KHRVLL Trigger: TAGCAGGACCCGGTGCTTCCAGCAGGAGTGCTGGTT...CCAGCATCCCCAGGTTGCCACAGCCCATCCTTCAAGCAGGAGCGAAAGGAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR-3UTR TCA 90 bp | GCAACCTGGGGATGCTGGCTTAGGCCTTATTTTCCTGCTATGAAGGATGGGCTGAGGTGGAGAATGGGCTaGAGGGGGCAAGCACAGCAC | + |
Preference number: 2 (lower is better) Translates to: ATWGCWLRPYFPAMKDGLRWRMG*RGQAQH Trigger: GTGCTGTGCTTGCCCCCTTCAGCCCATTCTCCACCT...CAGCCCATCCTTCATAGCAGGAAAATAAGGCCTAAGCCAGCATCCCCAGGTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR-3UTR CCA 90 bp | AGCTACCTCTCCAGCACCATGTCTACCTGTGTGCTGCCATGCTTAGCCAGAACACCAGTGGTGCACTGCTaGCCAGGGAGCTGTTTCAGA | + |
Preference number: 2 (lower is better) Translates to: SYLSSTMSTCVLPCLARTPVVHC*PGSCFR Trigger: TCTGAAACAGCTCCCTGGCCAGCAGTGCACCACTGG...TGTTCTGGCTAAGCATGGCAGCACACAGGTAGACATGGTGCTGGAGAGGTAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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3UTR-3UTR CCA 90 bp | AATGGCTTCCTGGACAACTGTGGGGCCCTGCTTCCAGAATTTGGCTCAGTAGGTATGAAGGATGGGCTGTaGCAACCTGGGGATGCTGGC | + |
Preference number: 2 (lower is better) Translates to: NGFLDNCGALLPEFGSVGMKDGL*QPGDAG Trigger: GCCAGCATCCCCAGGTTGCCACAGCCCATCCTTCAT...ACCTACTGAGCCAAATTCTGGAAGCAGGGCCCCACAGTTGTCCAGGAAGCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR CAA 90 bp | CCCCTCCACAGCTCTTCACTCTGGCTTGTGCCACTAGGCAGTTCATaGCAAAGTTTCAGGTGCTGGGACTGTGTGACAAAGCAGTCCTCT | + |
Preference number: 2 (lower is better) Translates to: PLHSSSLWLVPLGSS*QSFRCWDCVTKQSS Trigger: AGAGGACTGCTTTGTCACACAGTCCCAGCACCTGAAACTTTGCAATGAACTGCCTAGTGGCACAAGCCAGAGTGAAGAGCTGTGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR-3UTR TCA 90 bp | GAAATGTTCAAGTGTTGTCAATCGTTGGTGCCTGAGGGTGAATGGCCACTTCTGGGGAAGCAGAGGGCGTaGAGCAGATCTGGCTGTGAG | + |
Preference number: 2 (lower is better) Translates to: EMFKCCQSLVPEGEWPLLGKQRA*SRSGCE Trigger: CTCACAGCCAGATCTGCTTCACGCCCTCTGCTTCCC...CAGAAGTGGCCATTCACCCTCAGGCACCAACGATTGACAACACTTGAACATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR-3UTR GCA 90 bp | AATTTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTGAGGGTTTCAGAACTACCGCATaGTTCACACCAGGGAGGCCG | + |
Preference number: 2 (lower is better) Translates to: NLHNGGPPGSTHIIFPEGFRTTA*FTPGRP Trigger: CGGCCTCCCTGGTGTGAAGCATGCGGTAGTTCTGAA...ACCCTCAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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3UTR CAA 90 bp | ACAGGAATTAGGAGGCATGGCCTTGTTGGAGTAGGTGTGGCCTTGTaGGAGGAAGTTTGTTACTGGGGCTGGGCTTTGGGGATTCAGATG | + |
Preference number: 2 (lower is better) Translates to: TGIRRHGLVGVGVAL*EEVCYWGWALGIQM Trigger: CATCTGAATCCCCAAAGCCCAGCCCCAGTAACAAACTTCCTCCAACAAGGCCACACCTACTCCAACAAGGCCATGCCTCCTAATTCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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3UTR CAA 90 bp | GTAACAGGAATTAGGAGGCATGGCCTTGTTGGAGTAGGTGTGGCCTaGTTGGAGGAAGTTTGTTACTGGGGCTGGGCTTTGGGGATTCAG | + |
Preference number: 2 (lower is better) Translates to: VTGIRRHGLVGVGVA*LEEVCYWGWALGIQ Trigger: CTGAATCCCCAAAGCCCAGCCCCAGTAACAAACTTCCTCCAACAAGGCCACACCTACTCCAACAAGGCCATGCCTCCTAATTCCTGTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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3UTR-3UTR TCA 90 bp | CTGGGCTTTGGGGATTCAGATGCTCAAGCCAGGCCCAGTGTTTCTTTTCCTACTCACCTCTGGATTTCCTaGTTCTGCGGGGATCAGAGA | + |
Preference number: 2 (lower is better) Translates to: LGFGDSDAQARPSVSFPTHLWIS*FCGDQR Trigger: TCTCTGATCCCCGCAGAATCAGGAAATCCAGAGGTG...AGTAGGAAAAGAAACACTGGGCCTGGCTTGAGCATCTGAATCCCCAAAGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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3UTR-3UTR TCA 90 bp | CCTCTTAGCACTACAGCCTGGGTGGGTCCTCTTGTGTCTAAGCGCATCTTCAGTGCTCTAAATCTGAGTTaGACTCCAGGGAGCCCAATA | + |
Preference number: 2 (lower is better) Translates to: PLSTTAWVGPLVSKRIFSALNLS*TPGSPI Trigger: TATTGGGCTCCCTGGAGTTCAACTCAGATTTAGAGC...ACTGAAGATGCGCTTAGACACAAGAGGACCCACCCAGGCTGTAGTGCTAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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3UTR-3UTR CCA 90 bp | CTCTGTGAGAGCTCTCTGCATAAACAAGTCTGTGCCACCCTCTCTCCTCCCCGCACTGAAAAGGACATCTaGGCTTACAGCATATGTACT | + |
Preference number: 2 (lower is better) Translates to: LCESSLHKQVCATLSPPRTEKDI*AYSICT Trigger: AGTACATATGCTGTAAGCCCAGATGTCCTTTTCAGT...GCGGGGAGGAGAGAGGGTGGCACAGACTTGTTTATGCAGAGAGCTCTCACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR-3UTR GCA 90 bp | TACCTCTCCAGCACCATGTCTACCTGTGTGCTGCCATGCTTAGCCAGAACAAAATTCCTTCACAAGAGCTaGCTTGGTCATGGTGCATCT | + |
Preference number: 2 (lower is better) Translates to: YLSSTMSTCVLPCLARTKFLHKS*LGHGAS Trigger: AGATGCACCATGACCAAGGCAGCTCTTGTGAAGGAA...TTTTGTTCTGGCTAAGCATGGCAGCACACAGGTAGACATGGTGCTGGAGAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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3UTR CAA 90 bp | GATTACGTTGGATCGATAATAGACAAAGGTACAAGGAAAGCGCCTTaGCTCCTCTTAGCACTACAGCCTGGGTGGGTCCTCTTGTGTCTA | + |
Preference number: 2 (lower is better) Translates to: DYVGSIIDKGTRKAP*LLLALQPGWVLLCL Trigger: TAGACACAAGAGGACCCACCCAGGCTGTAGTGCTAAGAGGAGCAAAGGCGCTTTCCTTGTACCTTTGTCTATTATCGATCCAACGTAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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3UTR-3UTR GCA 90 bp | CTCTGTGAGAGCTCTCTGCATAAACAAGTCTGTGCCACCCTCTCTCCTCCCCGCTTGTCCCCAGTGTTCTaGAATCTTAACAAAATTATG | + |
Preference number: 2 (lower is better) Translates to: LCESSLHKQVCATLSPPRLSPVF*NLNKIM Trigger: CATAATTTTGTTAAGATTGCAGAACACTGGGGACAA...GCGGGGAGGAGAGAGGGTGGCACAGACTTGTTTATGCAGAGAGCTCTCACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR-3UTR CCA 90 bp | CCTCTTAGCACTACAGCCTGGGTGGGTCCTCTTGTGTCTAAGCGCATCTTCAGTGTTTTATTGGCAGAATaGCCAGTTTCTGATGGCTTA | + |
Preference number: 2 (lower is better) Translates to: PLSTTAWVGPLVSKRIFSVLLAE*PVSDGL Trigger: TAAGCCATCAGAAACTGGCCATTCTGCCAATAAAAC...ACTGAAGATGCGCTTAGACACAAGAGGACCCACCCAGGCTGTAGTGCTAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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3UTR-3UTR CCA 90 bp | CCTCTTAGCACTACAGCCTGGGTGGGTCCTCTTGTGTCTAAGCGCATCTTCAGTACTGAAAAGGACATCTaGGCTTACAGCATATGTACT | + |
Preference number: 2 (lower is better) Translates to: PLSTTAWVGPLVSKRIFSTEKDI*AYSICT Trigger: AGTACATATGCTGTAAGCCCAGATGTCCTTTTCAGT...ACTGAAGATGCGCTTAGACACAAGAGGACCCACCCAGGCTGTAGTGCTAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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3UTR-3UTR TCA 90 bp | CCTCTTAGCACTACAGCCTGGGTGGGTCCTCTTGTGTCTAAGCGCATCTTCAGTCAATGGATGCAATTCTaGTTGGTCATCAAATTTTGG | + |
Preference number: 2 (lower is better) Translates to: PLSTTAWVGPLVSKRIFSQWMQF*LVIKFW Trigger: CCAAAATTTGATGACCAATCAGAATTGCATCCATTG...ACTGAAGATGCGCTTAGACACAAGAGGACCCACCCAGGCTGTAGTGCTAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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3UTR-3UTR TCA 90 bp | GAAATGTTCAAGTGTTGTCAATCGTTGGTGCCTGAGGGTGAATGGCCACTTCTGCATAGTTTTATGATGTaGCAGGGAGGGAAGCACACA | + |
Preference number: 2 (lower is better) Translates to: EMFKCCQSLVPEGEWPLLHSFMM*QGGKHT Trigger: TGTGTGCTTCCCTCCCTGTCACATCATAAAACTATG...CAGAAGTGGCCATTCACCCTCAGGCACCAACGATTGACAACACTTGAACATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR-3UTR GCA 90 bp | AATGGCTTCCTGGACAACTGTGGGGCCCTGCTTCCAGAATTTGGCTCAGTAGGTTATATGCCAGGTCTTTaGCTAAAAGCACAAAACACA | + |
Preference number: 2 (lower is better) Translates to: NGFLDNCGALLPEFGSVGYMPGL*LKAQNT Trigger: TGTGTTTTGTGCTTTTAGGCAAAGACCTGGCATATA...ACCTACTGAGCCAAATTCTGGAAGCAGGGCCCCACAGTTGTCCAGGAAGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR-3UTR GCA 90 bp | TTATTTTCCTTGTTCCATCGGAGTGAGGTACATTCTCATTTTAGGAACCTCATCAGTAACCAGCACTCCTaGTGGAAGCACCGGGTCCTG | + |
Preference number: 2 (lower is better) Translates to: LFSLFHRSEVHSHFRNLISNQHS*WKHRVL Trigger: CAGGACCCGGTGCTTCCAGCAGGAGTGCTGGTTACT...GATGAGGTTCCTAAAATGAGAATGTACCTCACTCCGATGGAACAAGGAAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR-3UTR CCA 90 bp | CCTCTTAGCACTACAGCCTGGGTGGGTCCTCTTGTGTCTAAGCGCATCTTCAGTGATCAACAAAGTACCTaGCCCTCAATAAATGTCTTT | + |
Preference number: 2 (lower is better) Translates to: PLSTTAWVGPLVSKRIFSDQQST*PSINVF Trigger: AAAGACATTTATTGAGGGCCAGGTACTTTGTTGATC...ACTGAAGATGCGCTTAGACACAAGAGGACCCACCCAGGCTGTAGTGCTAAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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3UTR-3UTR GCA 90 bp | CCTCTTAGCACTACAGCCTGGGTGGGTCCTCTTGTGTCTAAGCGCATCTTCAGTTTGTCCCCAGTGTTCTaGAATCTTAACAAAATTATG | + |
Preference number: 2 (lower is better) Translates to: PLSTTAWVGPLVSKRIFSLSPVF*NLNKIM Trigger: CATAATTTTGTTAAGATTGCAGAACACTGGGGACAA...ACTGAAGATGCGCTTAGACACAAGAGGACCCACCCAGGCTGTAGTGCTAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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3UTR-3UTR GCA 90 bp | CCTCTTAGCACTACAGCCTGGGTGGGTCCTCTTGTGTCTAAGCGCATCTTCAGTTATCTTCTCAATGGATaGAATTCTGATTGGTCATCA | + |
Preference number: 2 (lower is better) Translates to: PLSTTAWVGPLVSKRIFSYLLNG*NSDWSS Trigger: TGATGACCAATCAGAATTGCATCCATTGAGAAGATA...ACTGAAGATGCGCTTAGACACAAGAGGACCCACCCAGGCTGTAGTGCTAAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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3UTR-3UTR CCA 90 bp | GCAACCTGGGGATGCTGGCTTAGGCCTTATTTTCCTGCTATGAAGGATGGGCTGGCTACTAAGGTACTCTaGACAATTTTATGTTCTGTT | + |
Preference number: 2 (lower is better) Translates to: ATWGCWLRPYFPAMKDGLATKVL*TILCSV Trigger: AACAGAACATAAAATTGTCCAGAGTACCTTAGTAGC...CAGCCCATCCTTCATAGCAGGAAAATAAGGCCTAAGCCAGCATCCCCAGGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR-3UTR TCA 90 bp | AAAAGGACATCTGGGCTTACAGCATATGTACTATATGCCAGGTCTTTGCCTAAAAACCAAAGATCCTGCTaGAGACAGACTGCATCCACT | + |
Preference number: 2 (lower is better) Translates to: KRTSGLTAYVLYARSLPKNQRSC*RQTAST Trigger: AGTGGATGCAGTCTGTCTTCAGCAGGATCTTTGGTT...TTTAGGCAAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGATGTCCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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3UTR-3UTR CCA 90 bp | AAAAGGACATCTGGGCTTACAGCATATGTACTATATGCCAGGTCTTTGCCTAAAATCCACTGCATGACTTaGCCTATAATGAAGGCTGTC | + |
Preference number: 2 (lower is better) Translates to: KRTSGLTAYVLYARSLPKIHCMT*PIMKAV Trigger: GACAGCCTTCATTATAGGCCAAGTCATGCAGTGGAT...TTTAGGCAAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGATGTCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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3UTR-3UTR CCA 90 bp | AAAAGGACATCTGGGCTTACAGCATATGTACTATATGCCAGGTCTTTGCCTAAAACCATGCAGTTTTATTaGCAGAATGGCCAGTTTCTG | + |
Preference number: 2 (lower is better) Translates to: KRTSGLTAYVLYARSLPKTMQFY*QNGQFL Trigger: CAGAAACTGGCCATTCTGCCAATAAAACTGCATGGT...TTTAGGCAAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGATGTCCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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3UTR-3UTR TCA 90 bp | CAAATTTCTATAGTCCCTCAAAACCTAATTTTGGACAAATATAACAGATGGCGCGTGGGATTCTACTTCTaGCTTCTCAGACCCAAACCA | + |
Preference number: 2 (lower is better) Translates to: QISIVPQNLILDKYNRWRVGFYF*LLRPKP Trigger: TGGTTTGGGTCTGAGAAGTCAGAAGTAGAATCCCAC...GCGCCATCTGTTATATTTGTCCAAAATTAGGTTTTGAGGGACTATAGAAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR TCA 90 bp | AAAAGGACATCTGGGCTTACAGCATATGTACTATATGCCAGGTCTTTGCCTAAACTGAATTTGCTGAACTaGAGCTGCTGTTTAAAGTCA | + |
Preference number: 2 (lower is better) Translates to: KRTSGLTAYVLYARSLPKLNLLN*SCCLKS Trigger: TGACTTTAAACAGCAGCTTCAGTTCAGCAAATTCAG...TTTAGGCAAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGATGTCCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR TCA 90 bp | AAAAGGACATCTGGGCTTACAGCATATGTACTATATGCCAGGTCTTTGCCTAAACAATGGATGCAATTCTaGTTGGTCATCAAATTTTGG | + |
Preference number: 2 (lower is better) Translates to: KRTSGLTAYVLYARSLPKQWMQF*LVIKFW Trigger: CCAAAATTTGATGACCAATCAGAATTGCATCCATTG...TTTAGGCAAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGATGTCCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR TCA 90 bp | CAAATTTCTATAGTCCCTCAAAACCTAATTTTGGACAAATATAACAGATGGCGCGCAGAGGAATTTATCTaGCTGCAGAGAAAGGGGTTT | + |
Preference number: 2 (lower is better) Translates to: QISIVPQNLILDKYNRWRAEEFI*LQRKGF Trigger: AAACCCCTTTCTCTGCAGTCAGATAAATTCCTCTGC...GCGCCATCTGTTATATTTGTCCAAAATTAGGTTTTGAGGGACTATAGAAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR CCA 90 bp | AGAACCAAGTTTTCCATGTTTACCAAGCTCTTAACACAAATGGATGCTTTAAAGATCCACTGCATGACTTaGCCTATAATGAAGGCTGTC | + |
Preference number: 2 (lower is better) Translates to: RTKFSMFTKLLTQMDALKIHCMT*PIMKAV Trigger: GACAGCCTTCATTATAGGCCAAGTCATGCAGTGGAT...CTTTAAAGCATCCATTTGTGTTAAGAGCTTGGTAAACATGGAAAACTTGGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR CCA 90 bp | AGTATCTTCTCAATGGATGCAATTCTGATTGGTCATCAAATTTTGGCAACTGAAACCATGCAGTTTTATTaGCAGAATGGCCAGTTTCTG | + |
Preference number: 2 (lower is better) Translates to: SIFSMDAILIGHQILATETMQFY*QNGQFL Trigger: CAGAAACTGGCCATTCTGCCAATAAAACTGCATGGT...TTCAGTTGCCAAAATTTGATGACCAATCAGAATTGCATCCATTGAGAAGATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR CCA 90 bp | AAAAGGACATCTGGGCTTACAGCATATGTACTATATGCCAGGTCTTTGCCTAAAGCTACTAAGGTACTCTaGACAATTTTATGTTCTGTT | + |
Preference number: 2 (lower is better) Translates to: KRTSGLTAYVLYARSLPKATKVL*TILCSV Trigger: AACAGAACATAAAATTGTCCAGAGTACCTTAGTAGC...TTTAGGCAAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGATGTCCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR GCA 90 bp | TTATTTTCCTTGTTCCATCGGAGTGAGGTACATTCTCATTTTAGGAACCTCATCCTCAAAAGTAGAAGTTaGTTGTTAGTAAAACCTCAG | + |
Preference number: 2 (lower is better) Translates to: LFSLFHRSEVHSHFRNLILKSRS*LLVKPQ Trigger: CTGAGGTTTTACTAACAAGCAACTTCTACTTTTGAG...GATGAGGTTCCTAAAATGAGAATGTACCTCACTCCGATGGAACAAGGAAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR-3UTR CCA 90 bp | AGTATCTTCTCAATGGATGCAATTCTGATTGGTCATCAAATTTTGGCAACTGAAGTTTTATTGGCAGAATaGCCAGTTTCTGATGGCTTA | + |
Preference number: 2 (lower is better) Translates to: SIFSMDAILIGHQILATEVLLAE*PVSDGL Trigger: TAAGCCATCAGAAACTGGCCATTCTGCCAATAAAAC...TTCAGTTGCCAAAATTTGATGACCAATCAGAATTGCATCCATTGAGAAGATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR CCA 90 bp | AGAACCAAGTTTTCCATGTTTACCAAGCTCTTAACACAAATGGATGCTTTAAAGGGATGCAATTCTGATTaGTCATCAAATTTTGGCAAC | + |
Preference number: 2 (lower is better) Translates to: RTKFSMFTKLLTQMDALKGCNSD*SSNFGN Trigger: GTTGCCAAAATTTGATGACCAATCAGAATTGCATCC...CTTTAAAGCATCCATTTGTGTTAAGAGCTTGGTAAACATGGAAAACTTGGTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR CCA 90 bp | CAAATTTCTATAGTCCCTCAAAACCTAATTTTGGACAAATATAACAGATGGCGCAAAGAATTCCTCAACTaGCAATTCACAGCAACGTTT | + |
Preference number: 2 (lower is better) Translates to: QISIVPQNLILDKYNRWRKEFLN*QFTATF Trigger: AAACGTTGCTGTGAATTGCCAGTTGAGGAATTCTTT...GCGCCATCTGTTATATTTGTCCAAAATTAGGTTTTGAGGGACTATAGAAATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR CCA 90 bp | CAAATTTCTATAGTCCCTCAAAACCTAATTTTGGACAAATATAACAGATGGCGCGATCAACAAAGTACCTaGCCCTCAATAAATGTCTTT | + |
Preference number: 2 (lower is better) Translates to: QISIVPQNLILDKYNRWRDQQST*PSINVF Trigger: AAAGACATTTATTGAGGGCCAGGTACTTTGTTGATC...GCGCCATCTGTTATATTTGTCCAAAATTAGGTTTTGAGGGACTATAGAAATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR GCA 90 bp | AGAACCAAGTTTTCCATGTTTACCAAGCTCTTAACACAAATGGATGCTTTAAAGCTCAAAAGTAGAAGTTaGTTGTTAGTAAAACCTCAG | + |
Preference number: 2 (lower is better) Translates to: RTKFSMFTKLLTQMDALKLKSRS*LLVKPQ Trigger: CTGAGGTTTTACTAACAAGCAACTTCTACTTTTGAG...CTTTAAAGCATCCATTTGTGTTAAGAGCTTGGTAAACATGGAAAACTTGGTTCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR TCA 72 bp | CACAGGGAAGCAGAGGGCGTGAAGCAGATCTGGCTGTaGGCCGAGCTCCCCTCCACAGCTCTTCACTCTGGC | + |
Preference number: 3 (lower is better) Translates to: HREAEGVKQIWL*AELPSTALHSG Trigger: GCCAGAGTGAAGAGCTGTGGAGGGGAGCTCGGCTCACAGCCAGATCTGCTTCACGCCCTCTGCTTCCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR GCA 72 bp | CACTGCTGGCCAGGGAGCTGTTTCAGAACTACCGCATaGTTCACACCAGGGAGGCCGGGCCGTCAGTCTGCA | + |
Preference number: 3 (lower is better) Translates to: HCWPGSCFRTTA*FTPGRPGRQSA Trigger: TGCAGACTGACGGCCCGGCCTCCCTGGTGTGAAGCATGCGGTAGTTCTGAAACAGCTCCCTGGCCAGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
||
3UTR TCA 72 bp | GGCCACTTCTGTCGGCCCTGCGGTGGTTCTTACAACTaGCTACCGCAGGGCCATGCAAATGGCTTCCTGGAC | + |
Preference number: 3 (lower is better) Translates to: GHFCRPCGGSYN*LPQGHANGFLD Trigger: GTCCAGGAAGCCATTTGCATGGCCCTGCGGTAGTCAGTTGTAAGAACCACCGCAGGGCCGACAGAAGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR GCA 72 bp | CTGCGGTGGTTCTTACAACTGACTACCGCAGGGCCATaGAAATGGCTTCCTGGACAACTGTGGGGCCCTGCT | + |
Preference number: 3 (lower is better) Translates to: LRWFLQLTTAGP*KWLPGQLWGPA Trigger: AGCAGGGCCCCACAGTTGTCCAGGAAGCCATTTGCATGGCCCTGCGGTAGTCAGTTGTAAGAACCACCGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR TCA 72 bp | CGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTaGGGGTTTGTAAAGCCCATGCTGCTGTACTCCACC | + |
Preference number: 3 (lower is better) Translates to: RWPTRFYTHHLP*GFVKPMLLYST Trigger: GGTGGAGTACAGCAGCATGGGCTTTACAAACCCTCAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
||
3UTR GCA 72 bp | GGCAAGGGGAAATGTTCAAGTGTTGTCAATCGTTGGTaGCTGAGGGTGAATGGCCACTTCTGTCGGCCCTGC | + |
Preference number: 3 (lower is better) Translates to: GKGKCSSVVNRW*LRVNGHFCRPC Trigger: GCAGGGCCGACAGAAGTGGCCATTCACCCTCAGGCACCAACGATTGACAACACTTGAACATTTCCCCTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR CCA 72 bp | ACCGCAGGGCCATGCAAATGGCTTCCTGGACAACTGTaGGGCCCTGCTTCCAGAATTTGGCTCAGTAGGTTT | + |
Preference number: 3 (lower is better) Translates to: TAGPCKWLPGQL*GPASRIWLSRF Trigger: AAACCTACTGAGCCAAATTCTGGAAGCAGGGCCCCACAGTTGTCCAGGAAGCCATTTGCATGGCCCTGCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR CCA 72 bp | ACAACTGACTACCGCAGGGCCATGCAAATGGCTTCCTaGACAACTGTGGGGCCCTGCTTCCAGAATTTGGCT | + |
Preference number: 3 (lower is better) Translates to: TTDYRRAMQMAS*TTVGPCFQNLA Trigger: AGCCAAATTCTGGAAGCAGGGCCCCACAGTTGTCCAGGAAGCCATTTGCATGGCCCTGCGGTAGTCAGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR TCA 72 bp | CTCCCCGCTGCCACTTCTCCTCAGAACCATCCTTCCTaGCTAACACTAGCTTCCTTTCGCTCCTGCTTGAAG | + |
Preference number: 3 (lower is better) Translates to: LPAATSPQNHPS*LTLASFRSCLK Trigger: CTTCAAGCAGGAGCGAAAGGAAGCTAGTGTTAGTCAGGAAGGATGGTTCTGAGGAGAAGTGGCAGCGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR GCA 72 bp | CTTGTGTCTAAGCGCATCTTCAGTAACCAGCACTCCTaGTGGAAGCACCGGGTCCTGCTACAGAGCTTACAC | + |
Preference number: 3 (lower is better) Translates to: LVSKRIFSNQHS*WKHRVLLQSLH Trigger: GTGTAAGCTCTGTAGCAGGACCCGGTGCTTCCAGCAGGAGTGCTGGTTACTGAAGATGCGCTTAGACACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR GCA 72 bp | GACTGTGTGACAAAGCAGTCCTCTGTGAGAGCTCTCTaGATAAACAAGTCTGTGCCACCCTCTCTCCTCCCC | + |
Preference number: 3 (lower is better) Translates to: DCVTKQSSVRAL*INKSVPPSLLP Trigger: GGGGAGGAGAGAGGGTGGCACAGACTTGTTTATGCAGAGAGCTCTCACAGAGGACTGCTTTGTCACACAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR CCA 72 bp | GTGTCTAAGCGCATCTTCAGTAACCAGCACTCCTGCTaGAAGCACCGGGTCCTGCTACAGAGCTTACACAGA | + |
Preference number: 3 (lower is better) Translates to: VSKRIFSNQHSC*KHRVLLQSLHR Trigger: TCTGTGTAAGCTCTGTAGCAGGACCCGGTGCTTCCAGCAGGAGTGCTGGTTACTGAAGATGCGCTTAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR CCA 72 bp | CCTTGTTGGAGGAAGTTTGTTACTGGGGCTGGGCTTTaGGGATTCAGATGCTCAAGCCAGGCCCAGTGTTTC | + |
Preference number: 3 (lower is better) Translates to: PCWRKFVTGAGL*GFRCSSQAQCF Trigger: GAAACACTGGGCCTGGCTTGAGCATCTGAATCCCCAAAGCCCAGCCCCAGTAACAAACTTCCTCCAACAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
||
3UTR CCA 72 bp | GGAGTAGGTGTGGCCTTGTTGGAGGAAGTTTGTTACTaGGGCTGGGCTTTGGGGATTCAGATGCTCAAGCCA | + |
Preference number: 3 (lower is better) Translates to: GVGVALLEEVCY*GWALGIQMLKP Trigger: TGGCTTGAGCATCTGAATCCCCAAAGCCCAGCCCCAGTAACAAACTTCCTCCAACAAGGCCACACCTACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
||
3UTR CCA 72 bp | CTGCTTGAAGGATGGGCTGTGGCAACCTGGGGATGCTaGCTTAGGCCTTATTTTCCTGCTATGAAGGATGGG | + |
Preference number: 3 (lower is better) Translates to: LLEGWAVATWGC*LRPYFPAMKDG Trigger: CCCATCCTTCATAGCAGGAAAATAAGGCCTAAGCCAGCATCCCCAGGTTGCCACAGCCCATCCTTCAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR CCA 72 bp | AGAGGCAAGGGGAAATGTTCAAGTGTTGTCAATCGTTaGTGCCTGAGGGTGAATGGCCACTTCTGTCGGCCC | + |
Preference number: 3 (lower is better) Translates to: RGKGKCSSVVNR*CLRVNGHFCRP Trigger: GGGCCGACAGAAGTGGCCATTCACCCTCAGGCACCAACGATTGACAACACTTGAACATTTCCCCTTGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR GCA 72 bp | TCCTGCTATGAAGGATGGGCTGTGGCAACCTGGGGATaGTGGCTTAGGCCTTATTTTCCTTGTTCCATCGGA | + |
Preference number: 3 (lower is better) Translates to: SCYEGWAVATWG*WLRPYFPCSIG Trigger: TCCGATGGAACAAGGAAAATAAGGCCTAAGCCAGCATCCCCAGGTTGCCACAGCCCATCCTTCATAGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR CCA 72 bp | TGCTATGAAGGATGGGCTGTGGCAACCTGGGGATGCTaGCTTAGGCCTTATTTTCCTTGTTCCATCGGAGTG | + |
Preference number: 3 (lower is better) Translates to: CYEGWAVATWGC*LRPYFPCSIGV Trigger: CACTCCGATGGAACAAGGAAAATAAGGCCTAAGCCAGCATCCCCAGGTTGCCACAGCCCATCCTTCATAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR TCA 72 bp | CGTGTGAACTTTCCCTTACGTCATAGTTTTATGATGTaGCAGGGAGGGAAGCACACAGGGAAGCAGAGGGCG | + |
Preference number: 3 (lower is better) Translates to: RVNFPLRHSFMM*QGGKHTGKQRA Trigger: CGCCCTCTGCTTCCCTGTGTGCTTCCCTCCCTGTCACATCATAAAACTATGACGTAAGGGAAAGTTCACACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR GCA 72 bp | GCTCAAGCCAGGCCCAGTGTTTCTTTTCCTACTGCCTaGCAATCTCGATGTAGAATTCTCAGCTACCTCTCC | + |
Preference number: 3 (lower is better) Translates to: AQARPSVSFPTA*QSRCRILSYLS Trigger: GGAGAGGTAGCTGAGAATTCTACATCGAGATTGGCAGGCAGTAGGAAAAGAAACACTGGGCCTGGCTTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
||
3UTR CCA 72 bp | TTTGGATTTCTAAGACATTCTCCAGTGGTGCACTGCTaGCCAGGGAGCTGTTTCAGAACTACCGCATGCTTC | + |
Preference number: 3 (lower is better) Translates to: FGFLRHSPVVHC*PGSCFRTTACF Trigger: GAAGCATGCGGTAGTTCTGAAACAGCTCCCTGGCCAGCAGTGCACCACTGGAGAATGTCTTAGAAATCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
||
3UTR-3UTR CAA 90 bp | CCTCTTAGCACTACAGCCTGGGTGGGTCCTCTTGTGTCTAAGCGCATCTTCAGTAACCATGCAGTTTTATaGGCAGAATGGCCAGTTTCT | + |
Preference number: 3 (lower is better) Translates to: PLSTTAWVGPLVSKRIFSNHAVL*AEWPVS Trigger: AGAAACTGGCCATTCTGCCAATAAAACTGCATGGTT...ACTGAAGATGCGCTTAGACACAAGAGGACCCACCCAGGCTGTAGTGCTAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR CAA 90 bp | ACTAGCTTCCTTTCGCTCCTGCTTGAAGGATGGGCTGTGGCAACCTGGGGATGCCAATTTTATGTTCTGTaGGTTCTAGGCCCAAAACAA | + |
Preference number: 3 (lower is better) Translates to: TSFLSLLLEGWAVATWGCQFYVL*VLGPKQ Trigger: TTGTTTTGGGCCTAGAACCAACAGAACATAAAATTG...GCATCCCCAGGTTGCCACAGCCCATCCTTCAAGCAGGAGCGAAAGGAAGCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR-3UTR CAA 90 bp | AATGGCTTCCTGGACAACTGTGGGGCCCTGCTTCCAGAATTTGGCTCAGTAGGTCTATATGCCAGGTCTTaGCCTAAAAGCACAAAACAC | + |
Preference number: 3 (lower is better) Translates to: NGFLDNCGALLPEFGSVGLYARS*PKSTKH Trigger: GTGTTTTGTGCTTTTAGGCAAAGACCTGGCATATAG...ACCTACTGAGCCAAATTCTGGAAGCAGGGCCCCACAGTTGTCCAGGAAGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
3UTR-3UTR CAA 90 bp | TTCCTACTGCCTGCCAATCTCGATGTAGAATTCTCAGCTACCTCTCCAGCACCAGTGAATTCTTTTAATTaGCACAACGGTGGCCCACCA | + |
Preference number: 3 (lower is better) Translates to: FLLPANLDVEFSATSPAPVNSFN*HNGGPP Trigger: TGGTGGGCCACCGTTGTGCAAATTAAAAGAATTCAC...TGGTGCTGGAGAGGTAGCTGAGAATTCTACATCGAGATTGGCAGGCAGTAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
||
3UTR TCA 72 bp | GTCAGACATGTTCCTCACTGCCCATGTGTCAGGGACTaGAAAGGACATCTGGGCTTACAGCATATGTACTAT | + |
Preference number: 3 (lower is better) Translates to: VRHVPHCPCVRD*KGHLGLQHMYY Trigger: ATAGTACATATGCTGTAAGCCCAGATGTCCTTTTCAGTCCCTGACACATGGGCAGTGAGGAACATGTCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR CCA 72 bp | ATCCTGCTGAAGACAGACTGCATCCACTGCATGACTTaGCCTATAATGAAGGCTGTCGCACCAATCTGTATT | + |
Preference number: 3 (lower is better) Translates to: ILLKTDCIHCMT*PIMKAVAPICI Trigger: AATACAGATTGGTGCGACAGCCTTCATTATAGGCCAAGTCATGCAGTGGATGCAGTCTGTCTTCAGCAGGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR CCA 72 bp | CTCACTGCCCATGTGTCAGGGACTGAAAAGGACATCTaGGCTTACAGCATATGTACTATATGCCAGGTCTTT | + |
Preference number: 3 (lower is better) Translates to: LTAHVSGTEKDI*AYSICTICQVF Trigger: AAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGATGTCCTTTTCAGTCCCTGACACATGGGCAGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR CCA 72 bp | TTGGTTCTAGGCCCAAAACAAGTCTTTCCTTCTACGTaGGATTCTACTTCTGACTTCTCAGACCCAAACCAG | + |
Preference number: 3 (lower is better) Translates to: LVLGPKQVFPST*DSTSDFSDPNQ Trigger: CTGGTTTGGGTCTGAGAAGTCAGAAGTAGAATCCCACGTAGAAGGAAAGACTTGTTTTGGGCCTAGAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR TCA 72 bp | TTAACCTCAAACTTTTGGCTGTCAAATTGGCAGTTATaGAAGGGACATAAGAAATTTCCCTGTGAATGGTCC | + |
Preference number: 3 (lower is better) Translates to: LTSNFWLSNWQL*KGHKKFPCEWS Trigger: GGACCATTCACAGGGAAATTTCTTATGTCCCTTTCATAACTGCCAATTTGACAGCCAAAAGTTTGAGGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
||
3UTR GCA 72 bp | GTTAGGAAGGTTCATGGGGTACAGTTAGTCCTGTTATaGACGTATAATGAGATTTCTTTAGAACATACCATG | + |
Preference number: 3 (lower is better) Translates to: VRKVHGVQLVLL*TYNEISLEHTM Trigger: CATGGTATGTTCTAAAGAAATCTCATTATACGTGCATAACAGGACTAACTGTACCCCATGAACCTTCCTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
||
3UTR-3UTR CAA 90 bp | CAAATTTCTATAGTCCCTCAAAACCTAATTTTGGACAAATATAACAGATGGCGCAACCATGCAGTTTTATaGGCAGAATGGCCAGTTTCT | + |
Preference number: 3 (lower is better) Translates to: QISIVPQNLILDKYNRWRNHAVL*AEWPVS Trigger: AGAAACTGGCCATTCTGCCAATAAAACTGCATGGTT...GCGCCATCTGTTATATTTGTCCAAAATTAGGTTTTGAGGGACTATAGAAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR TCA 72 bp | CCACGAATTAATGGGTTTTCTAAGAGTTTTCTTCTATaGTACACAATTTCCTTGGGCCTTTACGTGAGCAAA | + |
Preference number: 3 (lower is better) Translates to: PRINGFSKSFLL*YTISLGLYVSK Trigger: TTTGCTCACGTAAAGGCCCAAGGAAATTGTGTATCATAGAAGAAAACTCTTAGAAAACCCATTAATTCGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR-3UTR CAA 90 bp | CAAATTTCTATAGTCCCTCAAAACCTAATTTTGGACAAATATAACAGATGGCGCCAATTTTATGTTCTGTaGGTTCTAGGCCCAAAACAA | + |
Preference number: 3 (lower is better) Translates to: QISIVPQNLILDKYNRWRQFYVL*VLGPKQ Trigger: TTGTTTTGGGCCTAGAACCAACAGAACATAAAATTG...GCGCCATCTGTTATATTTGTCCAAAATTAGGTTTTGAGGGACTATAGAAATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR TCA 72 bp | TACTGTAGTGTAGTATCTTCTCAATGGATGCAATTCTaGTTGGTCATCAAATTTTGGCAACTGAATAATCTG | + |
Preference number: 3 (lower is better) Translates to: YCSVVSSQWMQF*LVIKFWQLNNL Trigger: CAGATTATTCAGTTGCCAAAATTTGATGACCAATCAGAATTGCATCCATTGAGAAGATACTACACTACAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
CDS-3UTR TCA 90 bp | AATGGCTTCCTGGACAACTGTGGGGCCCTGCTTCCAGAATTTGGCTCAGTAGGTGGGCGTGTGTACTGCTaGTTCCCTCAAGCAGGAGTC | + |
Preference number: 4 (lower is better) Translates to: NGFLDNCGALLPEFGSVGGRVYC*FPQAGV Trigger: GACTCCTGCTTGAGGGAATCAGCAGTACACACGCCC...ACCTACTGAGCCAAATTCTGGAAGCAGGGCCCCACAGTTGTCCAGGAAGCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR TCA 90 bp | TGGATTTCTAAGACATTCTCCAGTGGTGCACTGCTGGCCAGGGAGCTGTTTCAGGGGCGTGTGTACTGCTaGTTCCCTCAAGCAGGAGTC | + |
Preference number: 4 (lower is better) Translates to: WISKTFSSGALLARELFQGRVYC*FPQAGV Trigger: GACTCCTGCTTGAGGGAATCAGCAGTACACACGCCC...CTGAAACAGCTCCCTGGCCAGCAGTGCACCACTGGAGAATGTCTTAGAAATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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3UTR CAA 72 bp | GCCTTGTTGGAGGAAGTTTGTTACTGGGGCTGGGCTTaGGGGATTCAGATGCTCAAGCCAGGCCCAGTGTTT | + |
Preference number: 4 (lower is better) Translates to: ALLEEVCYWGWA*GIQMLKPGPVF Trigger: AAACACTGGGCCTGGCTTGAGCATCTGAATCCCCAAAGCCCAGCCCCAGTAACAAACTTCCTCCAACAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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3UTR CAA 72 bp | CAGAGGCAAGGGGAAATGTTCAAGTGTTGTCAATCGTaGGTGCCTGAGGGTGAATGGCCACTTCTGTCGGCC | + |
Preference number: 4 (lower is better) Translates to: QRQGEMFKCCQS*VPEGEWPLLSA Trigger: GGCCGACAGAAGTGGCCATTCACCCTCAGGCACCAACGATTGACAACACTTGAACATTTCCCCTTGCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR TCA 90 bp | TCATCTTCCCTGAGGGTTTGTAAAGCCCATGCTGCTGTACTCCACCTCTGGATTGGGCGTGTGTACTGCTaGTTCCCTCAAGCAGGAGTC | + |
Preference number: 4 (lower is better) Translates to: SSSLRVCKAHAAVLHLWIGRVYC*FPQAGV Trigger: GACTCCTGCTTGAGGGAATCAGCAGTACACACGCCC...AATCCAGAGGTGGAGTACAGCAGCATGGGCTTTACAAACCCTCAGGGAAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR GCA 90 bp | ACTAGCTTCCTTTCGCTCCTGCTTGAAGGATGGGCTGTGGCAACCTGGGGATGCCAGTTCTGTCTTCTCTaGCTGGCCAAGCTTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: TSFLSLLLEGWAVATWGCQFCLL*LAKLFF Trigger: GAAGAAAAGCTTGGCCAGGCAGAGAAGACAGAACTG...GCATCCCCAGGTTGCCACAGCCCATCCTTCAAGCAGGAGCGAAAGGAAGCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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3UTR CAA 72 bp | TTGCTCCTCTTAGCACTACAGCCTGGGTGGGTCCTCTaGTGTCTAAGCGCATCTTCAGTAACCAGCACTCCT | + |
Preference number: 4 (lower is better) Translates to: LLLLALQPGWVL*CLSASSVTSTP Trigger: AGGAGTGCTGGTTACTGAAGATGCGCTTAGACACAAGAGGACCCACCCAGGCTGTAGTGCTAAGAGGAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR TCA 90 bp | CTCTGTGAGAGCTCTCTGCATAAACAAGTCTGTGCCACCCTCTCTCCTCCCCGCAGGACCAATTGCATTTaGCAAAGCATATGGCACTGG | + |
Preference number: 4 (lower is better) Translates to: LCESSLHKQVCATLSPPRRTNCI*QSIWHW Trigger: CCAGTGCCATATGCTTTGTCAAATGCAATTGGTCCT...GCGGGGAGGAGAGAGGGTGGCACAGACTTGTTTATGCAGAGAGCTCTCACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR GCA 90 bp | ATTCTCCAGTGGTGCACTGCTGGCCAGGGAGCTGTTTCAGAACTACCGCATGCTGAGTCGGGTAATCTCTaGCTGACGATCAAATTCACT | + |
Preference number: 4 (lower is better) Translates to: ILQWCTAGQGAVSELPHAESGNL*LTIKFT Trigger: AGTGAATTTGATCGTCAGGCAGAGATTACCCGACTC...AGCATGCGGTAGTTCTGAAACAGCTCCCTGGCCAGCAGTGCACCACTGGAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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3UTR CAA 72 bp | GGATCGATAATAGACAAAGGTACAAGGAAAGCGCCTTaGCTCCTCTTAGCACTACAGCCTGGGTGGGTCCTC | + |
Preference number: 4 (lower is better) Translates to: GSIIDKGTRKAP*LLLALQPGWVL Trigger: GAGGACCCACCCAGGCTGTAGTGCTAAGAGGAGCAAAGGCGCTTTCCTTGTACCTTTGTCTATTATCGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR TCA 90 bp | TTTAATTTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTGAGAGGAGGTTTTCCAGGTaGGCGTCCAGTTCTGTCTTC | + |
Preference number: 4 (lower is better) Translates to: FNLHNGGPPGSTHIIFPERRFSR*ASSSVF Trigger: GAAGACAGAACTGGACGCTCACCTGGAAAACCTCCT...CTCAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAAATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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CDS-3UTR TCA 90 bp | CCTCTTAGCACTACAGCCTGGGTGGGTCCTCTTGTGTCTAAGCGCATCTTCAGTTTTAAGGCTGATGTTTaGATCAGCTCTCGGTCAGCT | + |
Preference number: 4 (lower is better) Translates to: PLSTTAWVGPLVSKRIFSFKADV*ISSRSA Trigger: AGCTGACCGAGAGCTGATTCAAACATCAGCCTTAAA...ACTGAAGATGCGCTTAGACACAAGAGGACCCACCCAGGCTGTAGTGCTAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR GCA 90 bp | ACTAGCTTCCTTTCGCTCCTGCTTGAAGGATGGGCTGTGGCAACCTGGGGATGCAACAGCACTTCGGTCTaGTTCATTATCTTTTCTGTC | + |
Preference number: 4 (lower is better) Translates to: TSFLSLLLEGWAVATWGCNSTSV*FIIFSV Trigger: GACAGAAAAGATAATGAAGCAGACCGAAGTGCTGTT...GCATCCCCAGGTTGCCACAGCCCATCCTTCAAGCAGGAGCGAAAGGAAGCTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
CDS-3UTR GCA 90 bp | ATTCTCCAGTGGTGCACTGCTGGCCAGGGAGCTGTTTCAGAACTACCGCATGCTGGAAAACTTCCCAGTTaGTTCTGTAGGTCTAGCATA | + |
Preference number: 4 (lower is better) Translates to: ILQWCTAGQGAVSELPHAGKLPS*FCRSSI Trigger: TATGCTAGACCTACAGAAGCAACTGGGAAGTTTTCC...AGCATGCGGTAGTTCTGAAACAGCTCCCTGGCCAGCAGTGCACCACTGGAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CCA 90 bp | TTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTGAGGGTTTGTTCTATCCTGGCATTTaGATTTGGCTGCAACAGCAC | + |
Preference number: 4 (lower is better) Translates to: LHNGGPPGSTHIIFPEGLFYPGI*IWLQQH Trigger: GTGCTGTTGCAGCCAAATCCAAATGCCAGGATAGAA...CAAACCCTCAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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CDS-3UTR CCA 90 bp | ACTAGCTTCCTTTCGCTCCTGCTTGAAGGATGGGCTGTGGCAACCTGGGGATGCCAAATTCTTCTATCCTaGCATTTGGATTTGGCTGCA | + |
Preference number: 4 (lower is better) Translates to: TSFLSLLLEGWAVATWGCQILLS*HLDLAA Trigger: TGCAGCCAAATCCAAATGCCAGGATAGAAGAATTTG...GCATCCCCAGGTTGCCACAGCCCATCCTTCAAGCAGGAGCGAAAGGAAGCTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR CCA 90 bp | TTTAATTTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTGAGCTACCCGTTGAAGCCTaGGCAGAAGGACCAATTGCA | + |
Preference number: 4 (lower is better) Translates to: FNLHNGGPPGSTHIIFPELPVEA*AEGPIA Trigger: TGCAATTGGTCCTTCTGCCCAGGCTTCAACGGGTAG...CTCAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAAATTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CCA 90 bp | CTTTTAATTTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTGCTACCCGTTGAAGCCTaGGCAGAAGGACCAATTGCA | + |
Preference number: 4 (lower is better) Translates to: LLICTTVAHQVLHTSSSLLPVEA*AEGPIA Trigger: TGCAATTGGTCCTTCTGCCCAGGCTTCAACGGGTAG...CAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAAATTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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3UTR CAA 72 bp | AGCTCTTCACTCTGGCTTGTGCCACTAGGCAGTTCATaGCAAAGTTTCAGGTGCTGGGACTGTGTGACAAAG | + |
Preference number: 4 (lower is better) Translates to: SSSLWLVPLGSS*QSFRCWDCVTK Trigger: CTTTGTCACACAGTCCCAGCACCTGAAACTTTGCAATGAACTGCCTAGTGGCACAAGCCAGAGTGAAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR TCA 90 bp | TGGATTTCTAAGACATTCTCCAGTGGTGCACTGCTGGCCAGGGAGCTGTTTCAGAGGACCAATTGCATTTaGCAAAGCATATGGCACTGG | + |
Preference number: 4 (lower is better) Translates to: WISKTFSSGALLARELFQRTNCI*QSIWHW Trigger: CCAGTGCCATATGCTTTGTCAAATGCAATTGGTCCT...CTGAAACAGCTCCCTGGCCAGCAGTGCACCACTGGAGAATGTCTTAGAAATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR TCA 90 bp | AATTTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTGAGGGTAGGACCAATTGCATTTaGCAAAGCATATGGCACTGG | + |
Preference number: 4 (lower is better) Translates to: NLHNGGPPGSTHIIFPEGRTNCI*QSIWHW Trigger: CCAGTGCCATATGCTTTGTCAAATGCAATTGGTCCT...ACCCTCAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR GCA 90 bp | AGCTACCTCTCCAGCACCATGTCTACCTGTGTGCTGCCATGCTTAGCCAGAACAGGAAAACTTCCCAGTTaGTTCTGTAGGTCTAGCATA | + |
Preference number: 4 (lower is better) Translates to: SYLSSTMSTCVLPCLARTGKLPS*FCRSSI Trigger: TATGCTAGACCTACAGAAGCAACTGGGAAGTTTTCC...TGTTCTGGCTAAGCATGGCAGCACACAGGTAGACATGGTGCTGGAGAGGTAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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CDS-3UTR TCA 90 bp | CAAACCCAACCCAAACCAAGCAAAACTCCAAAGCCAAGAGACCCTAGTAAGGCCTTTAAGGCTGATGTTTaGATCAGCTCTCGGTCAGCT | + |
Preference number: 4 (lower is better) Translates to: QTQPKPSKTPKPRDPSKAFKADV*ISSRSA Trigger: AGCTGACCGAGAGCTGATTCAAACATCAGCCTTAAA...GGCCTTACTAGGGTCTCTTGGCTTTGGAGTTTTGCTTGGTTTGGGTTGGGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR TCA 90 bp | AAAAGGACATCTGGGCTTACAGCATATGTACTATATGCCAGGTCTTTGCCTAAAGGGCGTGTGTACTGCTaGTTCCCTCAAGCAGGAGTC | + |
Preference number: 4 (lower is better) Translates to: KRTSGLTAYVLYARSLPKGRVYC*FPQAGV Trigger: GACTCCTGCTTGAGGGAATCAGCAGTACACACGCCC...TTTAGGCAAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGATGTCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR TCA 90 bp | CAAACCCAACCCAAACCAAGCAAAACTCCAAAGCCAAGAGACCCTAGTAAGGCCAGGACCAATTGCATTTaGCAAAGCATATGGCACTGG | + |
Preference number: 4 (lower is better) Translates to: QTQPKPSKTPKPRDPSKARTNCI*QSIWHW Trigger: CCAGTGCCATATGCTTTGTCAAATGCAATTGGTCCT...GGCCTTACTAGGGTCTCTTGGCTTTGGAGTTTTGCTTGGTTTGGGTTGGGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR GCA 90 bp | GCAACCTGGGGATGCTGGCTTAGGCCTTATTTTCCTGCTATGAAGGATGGGCTGGTTTATACGACTTGGTaGTTTTCTATCCAGTTTCTC | + |
Preference number: 4 (lower is better) Translates to: ATWGCWLRPYFPAMKDGLVYTTW*FSIQFL Trigger: GAGAAACTGGATAGAAAAGCACCAAGTCGTATAAAC...CAGCCCATCCTTCATAGCAGGAAAATAAGGCCTAAGCCAGCATCCCCAGGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR GCA 90 bp | CAAACCCAACCCAAACCAAGCAAAACTCCAAAGCCAAGAGACCCTAGTAAGGCCATACTGGTAACACTGTaGATAGTAAGTCATCTGGGC | + |
Preference number: 4 (lower is better) Translates to: QTQPKPSKTPKPRDPSKAILVTL*IVSHLG Trigger: GCCCAGATGACTTACTATGCACAGTGTTACCAGTAT...GGCCTTACTAGGGTCTCTTGGCTTTGGAGTTTTGCTTGGTTTGGGTTGGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR GCA 90 bp | TTCCTACTGCCTGCCAATCTCGATGTAGAATTCTCAGCTACCTCTCCAGCACCAATACTGGTAACACTGTaGATAGTAAGTCATCTGGGC | + |
Preference number: 4 (lower is better) Translates to: FLLPANLDVEFSATSPAPILVTL*IVSHLG Trigger: GCCCAGATGACTTACTATGCACAGTGTTACCAGTAT...TGGTGCTGGAGAGGTAGCTGAGAATTCTACATCGAGATTGGCAGGCAGTAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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CDS-3UTR GCA 90 bp | TTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTGAGGGTTTGCAGTTCAGTGCTATTTaGAGCATCATAATCATAGAG | + |
Preference number: 4 (lower is better) Translates to: LHNGGPPGSTHIIFPEGLQFSAI*SIIIIE Trigger: CTCTATGATTATGATGCTGCAAATAGCACTGAACTG...CAAACCCTCAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CCA 90 bp | GACATTCTCCAGTGGTGCACTGCTGGCCAGGGAGCTGTTTCAGAACTACCGCATAGAAAGATAATTGGATaGAAAACTTCCCAGTTGCTT | + |
Preference number: 4 (lower is better) Translates to: DILQWCTAGQGAVSELPHRKIIG*KTSQLL Trigger: AAGCAACTGGGAAGTTTTCCATCCAATTATCTTTCT...ATGCGGTAGTTCTGAAACAGCTCCCTGGCCAGCAGTGCACCACTGGAGAATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR GCA 90 bp | CAAACCCAACCCAAACCAAGCAAAACTCCAAAGCCAAGAGACCCTAGTAAGGCCAACAGCACTTCGGTCTaGTTCATTATCTTTTCTGTC | + |
Preference number: 4 (lower is better) Translates to: QTQPKPSKTPKPRDPSKANSTSV*FIIFSV Trigger: GACAGAAAAGATAATGAAGCAGACCGAAGTGCTGTT...GGCCTTACTAGGGTCTCTTGGCTTTGGAGTTTTGCTTGGTTTGGGTTGGGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR GCA 90 bp | CTTTTAATTTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTGATACTGGTAACACTGTaGATAGTAAGTCATCTGGGC | + |
Preference number: 4 (lower is better) Translates to: LLICTTVAHQVLHTSSSLILVTL*IVSHLG Trigger: GCCCAGATGACTTACTATGCACAGTGTTACCAGTAT...CAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAAATTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CCA 90 bp | AATGGCTTCCTGGACAACTGTGGGGCCCTGCTTCCAGAATTTGGCTCAGTAGGTGTTGTTTATACGACTTaGTGCTTTTCTATCCAGTTT | + |
Preference number: 4 (lower is better) Translates to: NGFLDNCGALLPEFGSVGVVYTT*CFSIQF Trigger: AAACTGGATAGAAAAGCACCAAGTCGTATAAACAAC...ACCTACTGAGCCAAATTCTGGAAGCAGGGCCCCACAGTTGTCCAGGAAGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR TCA 90 bp | TATTTTCCTTGTTCCATCGGAGTGAGGTACATTCTCATTTTAGGAACCTCATCTAGGAGGTTTTCCAGGTaGGCGTCCAGTTCTGTCTTC | + |
Preference number: 4 (lower is better) Translates to: YFPCSIGVRYILILGTSSRRFSR*ASSSVF Trigger: GAAGACAGAACTGGACGCTCACCTGGAAAACCTCCT...AGATGAGGTTCCTAAAATGAGAATGTACCTCACTCCGATGGAACAAGGAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR GCA 90 bp | TCTGGATTTCCTGATTCTGCGGGGATCAGAGAGTTTGGATTTCTAAGACATTCTCAGTTCTGTCTTCTCTaGCTGGCCAAGCTTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: SGFPDSAGIREFGFLRHSQFCLL*LAKLFF Trigger: GAAGAAAAGCTTGGCCAGGCAGAGAAGACAGAACTG...AGAATGTCTTAGAAATCCAAACTCTCTGATCCCCGCAGAATCAGGAAATCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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CDS-3UTR GCA 90 bp | GGCCCAAAACAAGTCTTTCCTTCTACGTGGGATTCTACTTCTGACTTCTCAGACATACTGGTAACACTGTaGATAGTAAGTCATCTGGGC | + |
Preference number: 4 (lower is better) Translates to: GPKQVFPSTWDSTSDFSDILVTL*IVSHLG Trigger: GCCCAGATGACTTACTATGCACAGTGTTACCAGTAT...GTCTGAGAAGTCAGAAGTAGAATCCCACGTAGAAGGAAAGACTTGTTTTGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR GCA 90 bp | TTCCTACTGCCTGCCAATCTCGATGTAGAATTCTCAGCTACCTCTCCAGCACCACAGTTCAGTGCTATTTaGAGCATCATAATCATAGAG | + |
Preference number: 4 (lower is better) Translates to: FLLPANLDVEFSATSPAPQFSAI*SIIIIE Trigger: CTCTATGATTATGATGCTGCAAATAGCACTGAACTG...TGGTGCTGGAGAGGTAGCTGAGAATTCTACATCGAGATTGGCAGGCAGTAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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CDS-3UTR GCA 90 bp | CAAACCCAACCCAAACCAAGCAAAACTCCAAAGCCAAGAGACCCTAGTAAGGCCTTTTGTCACTTCCTCTaGCCAAATCATAATGTTATC | + |
Preference number: 4 (lower is better) Translates to: QTQPKPSKTPKPRDPSKAFCHFL*PNHNVI Trigger: GATAACATTATGATTTGGGCAGAGGAAGTGACAAAA...GGCCTTACTAGGGTCTCTTGGCTTTGGAGTTTTGCTTGGTTTGGGTTGGGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR TCA 90 bp | AGAACCAAGTTTTCCATGTTTACCAAGCTCTTAACACAAATGGATGCTTTAAAGAGGAGGTTTTCCAGGTaGGCGTCCAGTTCTGTCTTC | + |
Preference number: 4 (lower is better) Translates to: RTKFSMFTKLLTQMDALKRRFSR*ASSSVF Trigger: GAAGACAGAACTGGACGCTCACCTGGAAAACCTCCT...CTTTAAAGCATCCATTTGTGTTAAGAGCTTGGTAAACATGGAAAACTTGGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR TCA 90 bp | AGAGCTGCCTTGGTCATGGTGCATCTTCACAGCAATAGAACACTAAGATCATCTCAATTCCTGTTCAGATaGACTTTTAGTTTCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: RAALVMVHLHSNRTLRSSQFLFR*TFSFCS Trigger: GCTGCAGAAACTAAAAGTTCATCTGAACAGGAATTG...AGATGATCTTAGTGTTCTATTGCTGTGAAGATGCACCATGACCAAGGCAGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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CDS-3UTR GCA 90 bp | GGCCCAAAACAAGTCTTTCCTTCTACGTGGGATTCTACTTCTGACTTCTCAGACGTTTATACGACTTGGTaGTTTTCTATCCAGTTTCTC | + |
Preference number: 4 (lower is better) Translates to: GPKQVFPSTWDSTSDFSDVYTTW*FSIQFL Trigger: GAGAAACTGGATAGAAAAGCACCAAGTCGTATAAAC...GTCTGAGAAGTCAGAAGTAGAATCCCACGTAGAAGGAAAGACTTGTTTTGGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR GCA 90 bp | GGATTTCCTGATTCTGCGGGGATCAGAGAGTTTGGATTTCTAAGACATTCTCCAGCCAAACTCAGTTCCTaGATCAATCATATATTGTCC | + |
Preference number: 4 (lower is better) Translates to: GFPDSAGIREFGFLRHSPAKLSS*INHILS Trigger: GGACAATATATGATTGATGCAGGAACTGAGTTTGGC...TGGAGAATGTCTTAGAAATCCAAACTCTCTGATCCCCGCAGAATCAGGAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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CDS-3UTR GCA 90 bp | ATTCTTTTAATTTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCGGAGTGACAGTTCAGTaGTATTTGCAGCATCATAAT | + |
Preference number: 4 (lower is better) Translates to: ILLICTTVAHQVLHTSSSGVTVQ*YLQHHN Trigger: ATTATGATGCTGCAAATAGCACTGAACTGTCACTCC...GGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAAATTAAAAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CCA 90 bp | AAAAGGACATCTGGGCTTACAGCATATGTACTATATGCCAGGTCTTTGCCTAAATTCTATCCTGGCATTTaGATTTGGCTGCAACAGCAC | + |
Preference number: 4 (lower is better) Translates to: KRTSGLTAYVLYARSLPKFYPGI*IWLQQH Trigger: GTGCTGTTGCAGCCAAATCCAAATGCCAGGATAGAA...TTTAGGCAAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGATGTCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR CCA 90 bp | CTTTTAATTTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTGAGAAAGATAATTGGATaGAAAACTTCCCAGTTGCTT | + |
Preference number: 4 (lower is better) Translates to: LLICTTVAHQVLHTSSSLRKIIG*KTSQLL Trigger: AAGCAACTGGGAAGTTTTCCATCCAATTATCTTTCT...CAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAAATTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CCA 90 bp | AGTATCTTCTCAATGGATGCAATTCTGATTGGTCATCAAATTTTGGCAACTGAACTACCCGTTGAAGCCTaGGCAGAAGGACCAATTGCA | + |
Preference number: 4 (lower is better) Translates to: SIFSMDAILIGHQILATELPVEA*AEGPIA Trigger: TGCAATTGGTCCTTCTGCCCAGGCTTCAACGGGTAG...TTCAGTTGCCAAAATTTGATGACCAATCAGAATTGCATCCATTGAGAAGATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR CCA 90 bp | AGAACCAAGTTTTCCATGTTTACCAAGCTCTTAACACAAATGGATGCTTTAAAGCTACCCGTTGAAGCCTaGGCAGAAGGACCAATTGCA | + |
Preference number: 4 (lower is better) Translates to: RTKFSMFTKLLTQMDALKLPVEA*AEGPIA Trigger: TGCAATTGGTCCTTCTGCCCAGGCTTCAACGGGTAG...CTTTAAAGCATCCATTTGTGTTAAGAGCTTGGTAAACATGGAAAACTTGGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
CDS-3UTR CCA 90 bp | GGCCCAAAACAAGTCTTTCCTTCTACGTGGGATTCTACTTCTGACTTCTCAGACAGAAAGATAATTGGATaGAAAACTTCCCAGTTGCTT | + |
Preference number: 4 (lower is better) Translates to: GPKQVFPSTWDSTSDFSDRKIIG*KTSQLL Trigger: AAGCAACTGGGAAGTTTTCCATCCAATTATCTTTCT...GTCTGAGAAGTCAGAAGTAGAATCCCACGTAGAAGGAAAGACTTGTTTTGGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
CDS-3UTR GCA 90 bp | CAAATTTCTATAGTCCCTCAAAACCTAATTTTGGACAAATATAACAGATGGCGCCAGTTCTGTCTTCTCTaGCTGGCCAAGCTTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: QISIVPQNLILDKYNRWRQFCLL*LAKLFF Trigger: GAAGAAAAGCTTGGCCAGGCAGAGAAGACAGAACTG...GCGCCATCTGTTATATTTGTCCAAAATTAGGTTTTGAGGGACTATAGAAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
CDS-3UTR GCA 90 bp | ATATCCAAACACCCTGTGTTGAAGGTAAATTCATTTAGTTTTCCAGGGTTCCATGAGTCGGGTAATCTCTaGCTGACGATCAAATTCACT | + |
Preference number: 4 (lower is better) Translates to: ISKHPVLKVNSFSFPGFHESGNL*LTIKFT Trigger: AGTGAATTTGATCGTCAGGCAGAGATTACCCGACTC...ATGGAACCCTGGAAAACTAAATGAATTTACCTTCAACACAGGGTGTTTGGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
||
CDS-3UTR GCA 90 bp | TTATTTTCCTTGTTCCATCGGAGTGAGGTACATTCTCATTTTAGGAACCTCATCGGAAAACTTCCCAGTTaGTTCTGTAGGTCTAGCATA | + |
Preference number: 4 (lower is better) Translates to: LFSLFHRSEVHSHFRNLIGKLPS*FCRSSI Trigger: TATGCTAGACCTACAGAAGCAACTGGGAAGTTTTCC...GATGAGGTTCCTAAAATGAGAATGTACCTCACTCCGATGGAACAAGGAAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
CDS-3UTR CCA 90 bp | AAAAGGACATCTGGGCTTACAGCATATGTACTATATGCCAGGTCTTTGCCTAAACAAATTCTTCTATCCTaGCATTTGGATTTGGCTGCA | + |
Preference number: 4 (lower is better) Translates to: KRTSGLTAYVLYARSLPKQILLS*HLDLAA Trigger: TGCAGCCAAATCCAAATGCCAGGATAGAAGAATTTG...TTTAGGCAAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGATGTCCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
CDS-3UTR GCA 90 bp | TATTTTCCTTGTTCCATCGGAGTGAGGTACATTCTCATTTTAGGAACCTCATCTGCCAAACTCAGTTCCTaGATCAATCATATATTGTCC | + |
Preference number: 4 (lower is better) Translates to: YFPCSIGVRYILILGTSSAKLSS*INHILS Trigger: GGACAATATATGATTGATGCAGGAACTGAGTTTGGC...AGATGAGGTTCCTAAAATGAGAATGTACCTCACTCCGATGGAACAAGGAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
||
CDS-3UTR GCA 90 bp | AGTATCTTCTCAATGGATGCAATTCTGATTGGTCATCAAATTTTGGCAACTGAAGAGTCGGGTAATCTCTaGCTGACGATCAAATTCACT | + |
Preference number: 4 (lower is better) Translates to: SIFSMDAILIGHQILATEESGNL*LTIKFT Trigger: AGTGAATTTGATCGTCAGGCAGAGATTACCCGACTC...TTCAGTTGCCAAAATTTGATGACCAATCAGAATTGCATCCATTGAGAAGATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
CDS-3UTR CCA 90 bp | AGAACCAAGTTTTCCATGTTTACCAAGCTCTTAACACAAATGGATGCTTTAAAGTTCTATCCTGGCATTTaGATTTGGCTGCAACAGCAC | + |
Preference number: 4 (lower is better) Translates to: RTKFSMFTKLLTQMDALKFYPGI*IWLQQH Trigger: GTGCTGTTGCAGCCAAATCCAAATGCCAGGATAGAA...CTTTAAAGCATCCATTTGTGTTAAGAGCTTGGTAAACATGGAAAACTTGGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
CDS-3UTR CCA 90 bp | TCTGGATTTCCTGATTCTGCGGGGATCAGAGAGTTTGGATTTCTAAGACATTCTGTTGTTTATACGACTTaGTGCTTTTCTATCCAGTTT | + |
Preference number: 4 (lower is better) Translates to: SGFPDSAGIREFGFLRHSVVYTT*CFSIQF Trigger: AAACTGGATAGAAAAGCACCAAGTCGTATAAACAAC...AGAATGTCTTAGAAATCCAAACTCTCTGATCCCCGCAGAATCAGGAAATCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
||
3UTR CAA 72 bp | TCTGGGCTTACAGCATATGTACTATATGCCAGGTCTTaGCCTAAAAGCACAAAACACAAAGTAATACTTGTG | + |
Preference number: 4 (lower is better) Translates to: SGLTAYVLYARS*PKSTKHKVILV Trigger: CACAAGTATTACTTTGTGTTTTGTGCTTTTAGGCAAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
3UTR CAA 72 bp | CCTGCATGTAACTCGTTTATATCCAAACACCCTGTGTaGAAGGTAAATTCATTTAGTTTTCCAGGGTTCCAT | + |
Preference number: 4 (lower is better) Translates to: PACNSFISKHPV*KVNSFSFPGFH Trigger: ATGGAACCCTGGAAAACTAAATGAATTTACCTTCAACACAGGGTGTTTGGATATAAACGAGTTACATGCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
||
CDS-3UTR GCA 90 bp | AGTATCTTCTCAATGGATGCAATTCTGATTGGTCATCAAATTTTGGCAACTGAAGGAAAACTTCCCAGTTaGTTCTGTAGGTCTAGCATA | + |
Preference number: 4 (lower is better) Translates to: SIFSMDAILIGHQILATEGKLPS*FCRSSI Trigger: TATGCTAGACCTACAGAAGCAACTGGGAAGTTTTCC...TTCAGTTGCCAAAATTTGATGACCAATCAGAATTGCATCCATTGAGAAGATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
CDS-3UTR CCA 90 bp | AAAAGGACATCTGGGCTTACAGCATATGTACTATATGCCAGGTCTTTGCCTAAAGTTGTTTATACGACTTaGTGCTTTTCTATCCAGTTT | + |
Preference number: 4 (lower is better) Translates to: KRTSGLTAYVLYARSLPKVVYTT*CFSIQF Trigger: AAACTGGATAGAAAAGCACCAAGTCGTATAAACAAC...TTTAGGCAAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGATGTCCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR TCA 90 bp | AGAACCAAGTTTTCCATGTTTACCAAGCTCTTAACACAAATGGATGCTTTAAAGCAATTCCTGTTCAGATaGACTTTTAGTTTCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: RTKFSMFTKLLTQMDALKQFLFR*TFSFCS Trigger: GCTGCAGAAACTAAAAGTTCATCTGAACAGGAATTG...CTTTAAAGCATCCATTTGTGTTAAGAGCTTGGTAAACATGGAAAACTTGGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163279.6 |
||
CDS-3UTR GCA 90 bp | AGTATCTTCTCAATGGATGCAATTCTGATTGGTCATCAAATTTTGGCAACTGAAGCCAAACTCAGTTCCTaGATCAATCATATATTGTCC | + |
Preference number: 4 (lower is better) Translates to: SIFSMDAILIGHQILATEAKLSS*INHILS Trigger: GGACAATATATGATTGATGCAGGAACTGAGTTTGGC...TTCAGTTGCCAAAATTTGATGACCAATCAGAATTGCATCCATTGAGAAGATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR GCA 90 bp | AGAACCAAGTTTTCCATGTTTACCAAGCTCTTAACACAAATGGATGCTTTAAAGGGAGTGACAGTTCAGTaGTATTTGCAGCATCATAAT | + |
Preference number: 4 (lower is better) Translates to: RTKFSMFTKLLTQMDALKGVTVQ*YLQHHN Trigger: ATTATGATGCTGCAAATAGCACTGAACTGTCACTCC...CTTTAAAGCATCCATTTGTGTTAAGAGCTTGGTAAACATGGAAAACTTGGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
||
CDS-3UTR GCA 90 bp | CAAATTTCTATAGTCCCTCAAAACCTAATTTTGGACAAATATAACAGATGGCGCGGAGTGACAGTTCAGTaGTATTTGCAGCATCATAAT | + |
Preference number: 4 (lower is better) Translates to: QISIVPQNLILDKYNRWRGVTVQ*YLQHHN Trigger: ATTATGATGCTGCAAATAGCACTGAACTGTCACTCC...GCGCCATCTGTTATATTTGTCCAAAATTAGGTTTTGAGGGACTATAGAAATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR GCA 90 bp | ATATGCTCATCAGAAATCTTAACCTCAAACTTTTGGCTGTCAAATTGGCAGTTAGTTTATACGACTTGGTaGTTTTCTATCCAGTTTCTC | + |
Preference number: 4 (lower is better) Translates to: ICSSEILTSNFWLSNWQLVYTTW*FSIQFL Trigger: GAGAAACTGGATAGAAAAGCACCAAGTCGTATAAAC...TAACTGCCAATTTGACAGCCAAAAGTTTGAGGTTAAGATTTCTGATGAGCATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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CDS-3UTR GCA 90 bp | AGTATCTTCTCAATGGATGCAATTCTGATTGGTCATCAAATTTTGGCAACTGAACAGTTCAGTGCTATTTaGAGCATCATAATCATAGAG | + |
Preference number: 4 (lower is better) Translates to: SIFSMDAILIGHQILATEQFSAI*SIIIIE Trigger: CTCTATGATTATGATGCTGCAAATAGCACTGAACTG...TTCAGTTGCCAAAATTTGATGACCAATCAGAATTGCATCCATTGAGAAGATACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR GCA 90 bp | AGAACCAAGTTTTCCATGTTTACCAAGCTCTTAACACAAATGGATGCTTTAAAGCAGTTCAGTGCTATTTaGAGCATCATAATCATAGAG | + |
Preference number: 4 (lower is better) Translates to: RTKFSMFTKLLTQMDALKQFSAI*SIIIIE Trigger: CTCTATGATTATGATGCTGCAAATAGCACTGAACTG...CTTTAAAGCATCCATTTGTGTTAAGAGCTTGGTAAACATGGAAAACTTGGTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR CCA 90 bp | AGAACCAAGTTTTCCATGTTTACCAAGCTCTTAACACAAATGGATGCTTTAAAGAGAAAGATAATTGGATaGAAAACTTCCCAGTTGCTT | + |
Preference number: 4 (lower is better) Translates to: RTKFSMFTKLLTQMDALKRKIIG*KTSQLL Trigger: AAGCAACTGGGAAGTTTTCCATCCAATTATCTTTCT...CTTTAAAGCATCCATTTGTGTTAAGAGCTTGGTAAACATGGAAAACTTGGTTCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS GCA 90 bp | TTTGCTAAGGAGGTTTTCCAGGTGAGCGTCCAGTTCTGTCTTCTCTaGCTGGCCAAGCTTTTCTTCTGTGAACTGCACGGCCCGGCTGAG | + |
Preference number: 5 (lower is better) Translates to: FAKEVFQVSVQFCLL*LAKLFFCELHGPAE Trigger: CTCAGCCGGGCCGTGCAGTTCACAGAAGAAAAGCTTGGCCAGGCAGAGAAGACAGAACTGGACGCTCACCTGGAAAACCTCCTTAGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS-3UTR CAA 90 bp | CTCTGTGAGAGCTCTCTGCATAAACAAGTCTGTGCCACCCTCTCTCCTCCCCGCCCCAAAAGTTCCGGGTaGTTTATACGACTTGGTGCT | + |
Preference number: 5 (lower is better) Translates to: LCESSLHKQVCATLSPPRPKSSG*FIRLGA Trigger: AGCACCAAGTCGTATAAACAACCCGGAACTTTTGGG...GCGGGGAGGAGAGAGGGTGGCACAGACTTGTTTATGCAGAGAGCTCTCACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | AGCTTCCTTTCGCTCCTGCTTGAAGGATGGGCTGTGGCAACCTGGGGATGCTGGGATTCTTTAAGGTCATaGAGGTTAGAAGGACAGGTG | + |
Preference number: 5 (lower is better) Translates to: SFLSLLLEGWAVATWGCWDSLRS*RLEGQV Trigger: CACCTGTCCTTCTAACCTCAATGACCTTAAAGAATC...CCAGCATCCCCAGGTTGCCACAGCCCATCCTTCAAGCAGGAGCGAAAGGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | GACATTCTCCAGTGGTGCACTGCTGGCCAGGGAGCTGTTTCAGAACTACCGCATGATTCTTTAAGGTCATaGAGGTTAGAAGGACAGGTG | + |
Preference number: 5 (lower is better) Translates to: DILQWCTAGQGAVSELPHDSLRS*RLEGQV Trigger: CACCTGTCCTTCTAACCTCAATGACCTTAAAGAATC...ATGCGGTAGTTCTGAAACAGCTCCCTGGCCAGCAGTGCACCACTGGAGAATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CAA 90 bp | AGCTTCCTTTCGCTCCTGCTTGAAGGATGGGCTGTGGCAACCTGGGGATGCTGGACAGTTCAGTGCTATTaGCAGCATCATAATCATAGA | + |
Preference number: 5 (lower is better) Translates to: SFLSLLLEGWAVATWGCWTVQCY*QHHNHR Trigger: TCTATGATTATGATGCTGCAAATAGCACTGAACTGT...CCAGCATCCCCAGGTTGCCACAGCCCATCCTTCAAGCAGGAGCGAAAGGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | AGCTACCTCTCCAGCACCATGTCTACCTGTGTGCTGCCATGCTTAGCCAGAACATGCATCAATCATATATaGTCCCAAAAGTTCCGGGTT | + |
Preference number: 5 (lower is better) Translates to: SYLSSTMSTCVLPCLARTCINHI*SQKFRV Trigger: AACCCGGAACTTTTGGGACAATATATGATTGATGCA...TGTTCTGGCTAAGCATGGCAGCACACAGGTAGACATGGTGCTGGAGAGGTAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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CDS-3UTR CAA 90 bp | TGGATTTCTAAGACATTCTCCAGTGGTGCACTGCTGGCCAGGGAGCTGTTTCAGAAGGACCAATTGCATTaGACAAAGCATATGGCACTG | + |
Preference number: 5 (lower is better) Translates to: WISKTFSSGALLARELFQKDQLH*TKHMAL Trigger: CAGTGCCATATGCTTTGTCAAATGCAATTGGTCCTT...CTGAAACAGCTCCCTGGCCAGCAGTGCACCACTGGAGAATGTCTTAGAAATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CAA 90 bp | ATCAGAGAGTTTGGATTTCTAAGACATTCTCCAGTGGTGCACTGCTGGCCAGGGGGGCAGAAGGACCAATaGCATTTGACAAAGCATATG | + |
Preference number: 5 (lower is better) Translates to: IREFGFLRHSPVVHCWPGGQKDQ*HLTKHM Trigger: CATATGCTTTGTCAAATGCAATTGGTCCTTCTGCCC...CCCTGGCCAGCAGTGCACCACTGGAGAATGTCTTAGAAATCCAAACTCTCTGAT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CAA 90 bp | TTTGGATTTCTAAGACATTCTCCAGTGGTGCACTGCTGGCCAGGGAGCTGTTTCCTAGCCTTCCTGTTGTaGCTGGATTCTTTAAGGTCA | + |
Preference number: 5 (lower is better) Translates to: FGFLRHSPVVHCWPGSCFLAFLL*LDSLRS Trigger: TGACCTTAAAGAATCCAGCAACAACAGGAAGGCTAG...GAAACAGCTCCCTGGCCAGCAGTGCACCACTGGAGAATGTCTTAGAAATCCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CAA 90 bp | TTTAATTTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTGAGGGGCAGAAGGACCAATaGCATTTGACAAAGCATATG | + |
Preference number: 5 (lower is better) Translates to: FNLHNGGPPGSTHIIFPEGQKDQ*HLTKHM Trigger: CATATGCTTTGTCAAATGCAATTGGTCCTTCTGCCC...CTCAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAAATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CAA 90 bp | ATCAGAGAGTTTGGATTTCTAAGACATTCTCCAGTGGTGCACTGCTGGCCAGGGGATTCTTTAAGGTCATaGAGGTTAGAAGGACAGGTG | + |
Preference number: 5 (lower is better) Translates to: IREFGFLRHSPVVHCWPGDSLRS*RLEGQV Trigger: CACCTGTCCTTCTAACCTCAATGACCTTAAAGAATC...CCCTGGCCAGCAGTGCACCACTGGAGAATGTCTTAGAAATCCAAACTCTCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CAA 90 bp | GAAATGTTCAAGTGTTGTCAATCGTTGGTGCCTGAGGGTGAATGGCCACTTCTGCTAGCCTTCCTGTTGTaGCTGGATTCTTTAAGGTCA | + |
Preference number: 5 (lower is better) Translates to: EMFKCCQSLVPEGEWPLLLAFLL*LDSLRS Trigger: TGACCTTAAAGAATCCAGCAACAACAGGAAGGCTAG...CAGAAGTGGCCATTCACCCTCAGGCACCAACGATTGACAACACTTGAACATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | CTTTTAATTTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCCTGCTAGCCTTCCTGTTGTaGCTGGATTCTTTAAGGTCA | + |
Preference number: 5 (lower is better) Translates to: LLICTTVAHQVLHTSSSLLAFLL*LDSLRS Trigger: TGACCTTAAAGAATCCAGCAACAACAGGAAGGCTAG...CAGGGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAAATTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CAA 90 bp | CCTCTTAGCACTACAGCCTGGGTGGGTCCTCTTGTGTCTAAGCGCATCTTCAGTACAGTTCAGTGCTATTaGCAGCATCATAATCATAGA | + |
Preference number: 5 (lower is better) Translates to: PLSTTAWVGPLVSKRIFSTVQCY*QHHNHR Trigger: TCTATGATTATGATGCTGCAAATAGCACTGAACTGT...ACTGAAGATGCGCTTAGACACAAGAGGACCCACCCAGGCTGTAGTGCTAAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | GAAATGTTCAAGTGTTGTCAATCGTTGGTGCCTGAGGGTGAATGGCCACTTCTGATTCCTGTTCAGATTTaGTCACTTCCTCTGCCCAAA | + |
Preference number: 5 (lower is better) Translates to: EMFKCCQSLVPEGEWPLLIPVQI*SLPLPK Trigger: TTTGGGCAGAGGAAGTGACAAAATCTGAACAGGAAT...CAGAAGTGGCCATTCACCCTCAGGCACCAACGATTGACAACACTTGAACATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | GAAATGTTCAAGTGTTGTCAATCGTTGGTGCCTGAGGGTGAATGGCCACTTCTGGGTTGTTTATACGACTaGGTGCTTTTCTATCCAGTT | + |
Preference number: 5 (lower is better) Translates to: EMFKCCQSLVPEGEWPLLGCLYD*VLFYPV Trigger: AACTGGATAGAAAAGCACCAAGTCGTATAAACAACC...CAGAAGTGGCCATTCACCCTCAGGCACCAACGATTGACAACACTTGAACATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | GGCCCAAAACAAGTCTTTCCTTCTACGTGGGATTCTACTTCTGACTTCTCAGACAAGGACCAATTGCATTaGACAAAGCATATGGCACTG | + |
Preference number: 5 (lower is better) Translates to: GPKQVFPSTWDSTSDFSDKDQLH*TKHMAL Trigger: CAGTGCCATATGCTTTGTCAAATGCAATTGGTCCTT...GTCTGAGAAGTCAGAAGTAGAATCCCACGTAGAAGGAAAGACTTGTTTTGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | TTTGGATTTCTAAGACATTCTCCAGTGGTGCACTGCTGGCCAGGGAGCTGTTTCACAGTTCAGTGCTATTaGCAGCATCATAATCATAGA | + |
Preference number: 5 (lower is better) Translates to: FGFLRHSPVVHCWPGSCFTVQCY*QHHNHR Trigger: TCTATGATTATGATGCTGCAAATAGCACTGAACTGT...GAAACAGCTCCCTGGCCAGCAGTGCACCACTGGAGAATGTCTTAGAAATCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CAA 90 bp | ATCAGAGAGTTTGGATTTCTAAGACATTCTCCAGTGGTGCACTGCTGGCCAGGGACAGTTCAGTGCTATTaGCAGCATCATAATCATAGA | + |
Preference number: 5 (lower is better) Translates to: IREFGFLRHSPVVHCWPGTVQCY*QHHNHR Trigger: TCTATGATTATGATGCTGCAAATAGCACTGAACTGT...CCCTGGCCAGCAGTGCACCACTGGAGAATGTCTTAGAAATCCAAACTCTCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS GCA 90 bp | AATAAGGGCATTTCCATAAGCTGTCCCTGGGCCAAACTCAGTTCCTaGATCAATCATATATTGTCCCAAAAGTTCCGGGTTGTTTATACG | + |
Preference number: 5 (lower is better) Translates to: NKGISISCPWAKLSS*INHILSQKFRVVYT Trigger: CGTATAAACAACCCGGAACTTTTGGGACAATATATGATTGATGCAGGAACTGAGTTTGGCCCAGGGACAGCTTATGGAAATGCCCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS-3UTR CAA 90 bp | ATTCTTTTAATTTGCACAACGGTGGCCCACCAGGTTCTACACACATCATCTTCCAAGGACCAATTGCATTaGACAAAGCATATGGCACTG | + |
Preference number: 5 (lower is better) Translates to: ILLICTTVAHQVLHTSSSKDQLH*TKHMAL Trigger: CAGTGCCATATGCTTTGTCAAATGCAATTGGTCCTT...GGAAGATGATGTGTGTAGAACCTGGTGGGCCACCGTTGTGCAAATTAAAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199350.5 ENSMUST00000199531.5 |
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CDS-3UTR CAA 90 bp | GGATTTCCTGATTCTGCGGGGATCAGAGAGTTTGGATTTCTAAGACATTCTCCAGGTTGTTTATACGACTaGGTGCTTTTCTATCCAGTT | + |
Preference number: 5 (lower is better) Translates to: GFPDSAGIREFGFLRHSPGCLYD*VLFYPV Trigger: AACTGGATAGAAAAGCACCAAGTCGTATAAACAACC...TGGAGAATGTCTTAGAAATCCAAACTCTCTGATCCCCGCAGAATCAGGAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199531.5 |
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CDS-3UTR CAA 90 bp | CAAATTTCTATAGTCCCTCAAAACCTAATTTTGGACAAATATAACAGATGGCGCCCCAAAAGTTCCGGGTaGTTTATACGACTTGGTGCT | + |
Preference number: 5 (lower is better) Translates to: QISIVPQNLILDKYNRWRPKSSG*FIRLGA Trigger: AGCACCAAGTCGTATAAACAACCCGGAACTTTTGGG...GCGCCATCTGTTATATTTGTCCAAAATTAGGTTTTGAGGGACTATAGAAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | AAAAGGACATCTGGGCTTACAGCATATGTACTATATGCCAGGTCTTTGCCTAAATGCATCAATCATATATaGTCCCAAAAGTTCCGGGTT | + |
Preference number: 5 (lower is better) Translates to: KRTSGLTAYVLYARSLPKCINHI*SQKFRV Trigger: AACCCGGAACTTTTGGGACAATATATGATTGATGCA...TTTAGGCAAAGACCTGGCATATAGTACATATGCTGTAAGCCCAGATGTCCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | TATTTTCCTTGTTCCATCGGAGTGAGGTACATTCTCATTTTAGGAACCTCATCTAAGGACCAATTGCATTaGACAAAGCATATGGCACTG | + |
Preference number: 5 (lower is better) Translates to: YFPCSIGVRYILILGTSSKDQLH*TKHMAL Trigger: CAGTGCCATATGCTTTGTCAAATGCAATTGGTCCTT...AGATGAGGTTCCTAAAATGAGAATGTACCTCACTCCGATGGAACAAGGAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198254.5 |
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CDS TCA 90 bp | TCTATAAAGTTTCTTAAAGGAGTGAGGAAATTTAAGGCTGATGTTTaGATCAGCTCTCGGTCAGCTGTTCCAATTCGCTTCTGTGTTTCT | + |
Preference number: 5 (lower is better) Translates to: SIKFLKGVRKFKADV*ISSRSAVPIRFCVS Trigger: AGAAACACAGAAGCGAATTGGAACAGCTGACCGAGAGCTGATTCAAACATCAGCCTTAAATTTCCTCACTCCTTTAAGAAACTTTATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS-3UTR CAA 90 bp | AGTATCTTCTCAATGGATGCAATTCTGATTGGTCATCAAATTTTGGCAACTGAAGGGCAGAAGGACCAATaGCATTTGACAAAGCATATG | + |
Preference number: 5 (lower is better) Translates to: SIFSMDAILIGHQILATEGQKDQ*HLTKHM Trigger: CATATGCTTTGTCAAATGCAATTGGTCCTTCTGCCC...TTCAGTTGCCAAAATTTGATGACCAATCAGAATTGCATCCATTGAGAAGATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | AGAACCAAGTTTTCCATGTTTACCAAGCTCTTAACACAAATGGATGCTTTAAAGGGGCAGAAGGACCAATaGCATTTGACAAAGCATATG | + |
Preference number: 5 (lower is better) Translates to: RTKFSMFTKLLTQMDALKGQKDQ*HLTKHM Trigger: CATATGCTTTGTCAAATGCAATTGGTCCTTCTGCCC...CTTTAAAGCATCCATTTGTGTTAAGAGCTTGGTAAACATGGAAAACTTGGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | CAAATTTCTATAGTCCCTCAAAACCTAATTTTGGACAAATATAACAGATGGCGCCTAGCCTTCCTGTTGTaGCTGGATTCTTTAAGGTCA | + |
Preference number: 5 (lower is better) Translates to: QISIVPQNLILDKYNRWRLAFLL*LDSLRS Trigger: TGACCTTAAAGAATCCAGCAACAACAGGAAGGCTAG...GCGCCATCTGTTATATTTGTCCAAAATTAGGTTTTGAGGGACTATAGAAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | CAAATTTCTATAGTCCCTCAAAACCTAATTTTGGACAAATATAACAGATGGCGCGATTCTTTAAGGTCATaGAGGTTAGAAGGACAGGTG | + |
Preference number: 5 (lower is better) Translates to: QISIVPQNLILDKYNRWRDSLRS*RLEGQV Trigger: CACCTGTCCTTCTAACCTCAATGACCTTAAAGAATC...GCGCCATCTGTTATATTTGTCCAAAATTAGGTTTTGAGGGACTATAGAAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | CAAATTTCTATAGTCCCTCAAAACCTAATTTTGGACAAATATAACAGATGGCGCGGTTGTTTATACGACTaGGTGCTTTTCTATCCAGTT | + |
Preference number: 5 (lower is better) Translates to: QISIVPQNLILDKYNRWRGCLYD*VLFYPV Trigger: AACTGGATAGAAAAGCACCAAGTCGTATAAACAACC...GCGCCATCTGTTATATTTGTCCAAAATTAGGTTTTGAGGGACTATAGAAATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS-3UTR CAA 90 bp | AGAACCAAGTTTTCCATGTTTACCAAGCTCTTAACACAAATGGATGCTTTAAAGTGCATCAATCATATATaGTCCCAAAAGTTCCGGGTT | + |
Preference number: 5 (lower is better) Translates to: RTKFSMFTKLLTQMDALKCINHI*SQKFRV Trigger: AACCCGGAACTTTTGGGACAATATATGATTGATGCA...CTTTAAAGCATCCATTTGTGTTAAGAGCTTGGTAAACATGGAAAACTTGGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 |
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CDS GCA 72 bp | GAGGTTTTCCAGGTGAGCGTCCAGTTCTGTCTTCTCTaGCTGGCCAAGCTTTTCTTCTGTGAACTGCACGGC | + |
Preference number: 6 (lower is better) Translates to: EVFQVSVQFCLL*LAKLFFCELHG Trigger: GCCGTGCAGTTCACAGAAGAAAAGCTTGGCCAGGCAGAGAAGACAGAACTGGACGCTCACCTGGAAAACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS CAA 72 bp | CAAGGCTACCCGTTGAAGCCTGGGCAGAAGGACCAATaGCATTTGACAAAGCATATGGCACTGGTGTCCCAG | + |
Preference number: 6 (lower is better) Translates to: QGYPLKPGQKDQ*HLTKHMALVSQ Trigger: CTGGGACACCAGTGCCATATGCTTTGTCAAATGCAATTGGTCCTTCTGCCCAGGCTTCAACGGGTAGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199350.5 ENSMUST00000199531.5 ENSMUST00000199854.5 ENSMUST00000200532.2 |
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CDS CAA 72 bp | TACCCGTTGAAGCCTGGGCAGAAGGACCAATTGCATTaGACAAAGCATATGGCACTGGTGTCCCAGAGGTCT | + |
Preference number: 6 (lower is better) Translates to: YPLKPGQKDQLH*TKHMALVSQRS Trigger: AGACCTCTGGGACACCAGTGCCATATGCTTTGTCAAATGCAATTGGTCCTTCTGCCCAGGCTTCAACGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199350.5 ENSMUST00000199531.5 ENSMUST00000199854.5 ENSMUST00000200532.2 |
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CDS CAA 72 bp | CCCTGGGCCAAACTCAGTTCCTGCATCAATCATATATaGTCCCAAAAGTTCCGGGTTGTTTATACGACTTGG | + |
Preference number: 6 (lower is better) Translates to: PWAKLSSCINHI*SQKFRVVYTTW Trigger: CCAAGTCGTATAAACAACCCGGAACTTTTGGGACAATATATGATTGATGCAGGAACTGAGTTTGGCCCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS CAA 72 bp | CTAGCCTTCCTGTTGTTGCTGGATTCTTTAAGGTCATaGAGGTTAGAAGGACAGGTGATTACAAGGCTACCC | + |
Preference number: 6 (lower is better) Translates to: LAFLLLLDSLRS*RLEGQVITRLP Trigger: GGGTAGCCTTGTAATCACCTGTCCTTCTAACCTCAATGACCTTAAAGAATCCAGCAACAACAGGAAGGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199350.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS TCA 72 bp | GACACTGAACACAGTGATTACCTCATCGGCCAGGAGTaGCAGTTCAGTGCTATTTGCAGCATCATAATCATA | + |
Preference number: 6 (lower is better) Translates to: DTEHSDYLIGQE*QFSAICSIIII Trigger: TATGATTATGATGCTGCAAATAGCACTGAACTGTCACTCCTGGCCGATGAGGTAATCACTGTGTTCAGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS GCA 72 bp | ATTTCCATAAGCTGTCCCTGGGCCAAACTCAGTTCCTaGATCAATCATATATTGTCCCAAAAGTTCCGGGTT | + |
Preference number: 6 (lower is better) Translates to: ISISCPWAKLSS*INHILSQKFRV Trigger: AACCCGGAACTTTTGGGACAATATATGATTGATGCAGGAACTGAGTTTGGCCCAGGGACAGCTTATGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS CAA 90 bp | ATAAGCTGTCCCTGGGCCAAACTCAGTTCCTGCATCAATCATATATaGTCCCAAAAGTTCCGGGTTGTTTATACGACTTGGTGCTTTTCT | + |
Preference number: 6 (lower is better) Translates to: ISCPWAKLSSCINHI*SQKFRVVYTTWCFS Trigger: AGAAAAGCACCAAGTCGTATAAACAACCCGGAACTTTTGGGACAATATATGATTGATGCAGGAACTGAGTTTGGCCCAGGGACAGCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS CAA 90 bp | CTCAAGCAGGAGTCGGGTAATCTCTGCCTGACGATCAAATTCACTTaGAGTTATTCTCAATTCCTGTTCAGATTTTGTCACTTCCTCTGC | + |
Preference number: 6 (lower is better) Translates to: LKQESGNLCLTIKFT*SYSQFLFRFCHFLC Trigger: GCAGAGGAAGTGACAAAATCTGAACAGGAATTGAGAATAACTCAAAGTGAATTTGATCGTCAGGCAGAGATTACCCGACTCCTGCTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198254.5 ENSMUST00000200532.2 |
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CDS CAA 90 bp | CTCAAGCAGGAGTCGGGTAATCTCTGCCTGACGATCAAATTCACTTaGAGTTATTCTCAATTCCTGTTCAGACTTCAGCCATTTTACATG | + |
Preference number: 6 (lower is better) Translates to: LKQESGNLCLTIKFT*SYSQFLFRLQPFYM Trigger: CATGTAAAATGGCTGAAGTCTGAACAGGAATTGAGAATAACTCAAAGTGAATTTGATCGTCAGGCAGAGATTACCCGACTCCTGCTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199854.5 |
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CDS TCA 72 bp | TTTCTTAAAGGAGTGAGGAAATTTAAGGCTGATGTTTaGATCAGCTCTCGGTCAGCTGTTCCAATTCGCTTC | + |
Preference number: 6 (lower is better) Translates to: FLKGVRKFKADV*ISSRSAVPIRF Trigger: GAAGCGAATTGGAACAGCTGACCGAGAGCTGATTCAAACATCAGCCTTAAATTTCCTCACTCCTTTAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS CCA 72 bp | TCCACATTTAATAAGGGCATTTCCATAAGCTGTCCCTaGGCCAAACTCAGTTCCTGCATCAATCATATATTG | + |
Preference number: 6 (lower is better) Translates to: STFNKGISISCP*AKLSSCINHIL Trigger: CAATATATGATTGATGCAGGAACTGAGTTTGGCCCAGGGACAGCTTATGGAAATGCCCTTATTAAATGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS CAA 90 bp | TATCCAGTTTCTCATAAACAAATTCTTCTATCCTGGCATTTGGATTaGGCTGCAACAGCACTTCGGTCTGCTTCATTATCTTTTCTGTCC | + |
Preference number: 6 (lower is better) Translates to: YPVSHKQILLSWHLD*AATALRSASLSFLS Trigger: GGACAGAAAAGATAATGAAGCAGACCGAAGTGCTGTTGCAGCCAAATCCAAATGCCAGGATAGAAGAATTTGTTTATGAGAAACTGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS CAA 72 bp | TCTCATAAACAAATTCTTCTATCCTGGCATTTGGATTaGGCTGCAACAGCACTTCGGTCTGCTTCATTATCT | + |
Preference number: 6 (lower is better) Translates to: SHKQILLSWHLD*AATALRSASLS Trigger: AGATAATGAAGCAGACCGAAGTGCTGTTGCAGCCAAATCCAAATGCCAGGATAGAAGAATTTGTTTATGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS CAA 72 bp | CCTGCATCAATCATATATTGTCCCAAAAGTTCCGGGTaGTTTATACGACTTGGTGCTTTTCTATCCAGTTTC | + |
Preference number: 6 (lower is better) Translates to: PASIIYCPKSSG*FIRLGAFLSSF Trigger: GAAACTGGATAGAAAAGCACCAAGTCGTATAAACAACCCGGAACTTTTGGGACAATATATGATTGATGCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000163279.6 ENSMUST00000198254.5 ENSMUST00000199531.5 ENSMUST00000199854.5 |
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CDS GCA 72 bp | TATTCTCAATTCCTGTTCAGATTTTGTCACTTCCTCTaGCCAAATCTTCAGCCATTTTACATGCAGGAAGTT | + |
Preference number: 6 (lower is better) Translates to: YSQFLFRFCHFL*PNLQPFYMQEV Trigger: AACTTCCTGCATGTAAAATGGCTGAAGATTTGGGCAGAGGAAGTGACAAAATCTGAACAGGAATTGAGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200532.2 |