Pregenerated sensors for SH3GL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030638Ensembl transcript IDs: ENSMUST00000032874.14, ENSMUST00000177883.8, ENSMUST00000177895.8, ENSMUST00000178526.2, ENSMUST00000179318.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGCATGCAGTCCCCCAGCAAGCCTTCCGTCTGTGGGTAGCCAGTaGCCTTCACCTGCCCTCGGAGCTTCGACACAGTGTTCAGCATTC | + |
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Preference number: 1 (lower is better) Translates to: SACSPPASLPSVGSQ*PSPALGASTQCSAF Trigger: GAATGCTGAACACTGTGTCGAAGCTCCGAGGGCAGGTGAAGGCCACTGGCTACCCACAGACGGAAGGCTTGCTGGGGGACTGCATGCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR GCA 90 bp | TGCCAAAAGCAGAGTCTTCTCCGAGCTCCTTGCCATACTTCAGCATaGAGTCCCCCAGCAAGCCTTCCGTCTGTGGGTAGCCAGTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: CQKQSLLRAPCHTSA*SPPASLPSVGSQWP Trigger: AGGCCACTGGCTACCCACAGACGGAAGGCTTGCTGGGGGACTGCATGCTGAAGTATGGCAAGGAGCTCGGAGAAGACTCTGCTTTTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR GCA 90 bp | CTCGCTTGGGGACTTTGGATGCAAGAGATATTCGCAACTCCAGCTTaGTCTGCAGCTCCTGGAGGATCTCTGTGGACTGCCTGTGATAGT | + |
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Preference number: 1 (lower is better) Translates to: LAWGLWMQEIFATPA*SAAPGGSLWTACDS Trigger: ACTATCACAGGCAGTCCACAGAGATCCTCCAGGAGCTGCAGAGCAAGCTGGAGTTGCGAATATCTCTTGCATCCAAAGTCCCCAAGCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR CCA 90 bp | ATATTCGCAACTCCAGCTTGCTCTGCAGCTCCTGGAGGATCTCTGTaGACTGCCTGTGATAGTCTAATGCCGCCTCTACAAACACAGCCA | + |
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Preference number: 1 (lower is better) Translates to: IFATPACSAAPGGSL*TACDSLMPPLQTQP Trigger: TGGCTGTGTTTGTAGAGGCGGCATTAGACTATCACAGGCAGTCCACAGAGATCCTCCAGGAGCTGCAGAGCAAGCTGGAGTTGCGAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR CCA 90 bp | GGGTCCGACCCCATTGGCATCGGTGGAACTCATGTTCACAGGCTTTaGCATGAATTCTCGCTTGGGGACTTTGGATGCAAGAGATATTCG | + |
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Preference number: 1 (lower is better) Translates to: GSDPIGIGGTHVHRL*HEFSLGDFGCKRYS Trigger: CGAATATCTCTTGCATCCAAAGTCCCCAAGCGAGAATTCATGCCAAAGCCTGTGAACATGAGTTCCACCGATGCCAATGGGGTCGGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR GCA 90 bp | CATGTTCACAGGCTTTGGCATGAATTCTCGCTTGGGGACTTTGGATaGAAGAGATATTCGCAACTCCAGCTTGCTCTGCAGCTCCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: HVHRLWHEFSLGDFG*KRYSQLQLALQLLE Trigger: CTCCAGGAGCTGCAGAGCAAGCTGGAGTTGCGAATATCTCTTGCATCCAAAGTCCCCAAGCGAGAATTCATGCCAAAGCCTGTGAACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR TCA 90 bp | CGACCCCATTGGCATCGGTGGAACTCATGTTCACAGGCTTTGGCATaGATTCTCGCTTGGGGACTTTGGATGCAAGAGATATTCGCAACT | + |
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Preference number: 1 (lower is better) Translates to: RPHWHRWNSCSQALA*ILAWGLWMQEIFAT Trigger: AGTTGCGAATATCTCTTGCATCCAAAGTCCCCAAGCGAGAATTCATGCCAAAGCCTGTGAACATGAGTTCCACCGATGCCAATGGGGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR CCA 90 bp | GGCCAGAGAGCGAGGATGTCACAGAACACCACACTGAGAGAGCACTaGTGCCAATTCATTTCAGTTCTGAAGTTAGGTCCAAAAGACACA | + |
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Preference number: 1 (lower is better) Translates to: GQRARMSQNTTLREH*CQFISVLKLGPKDT Trigger: TGTGTCTTTTGGACCTAACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGACATCCTCGCTCTCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032874.14 ENSMUST00000177883.8 ENSMUST00000177895.8 ENSMUST00000178526.2 ENSMUST00000179318.8 |
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| 3UTR CCA 90 bp | AGGGTGCGTTCCCACTGCAGTCAAGGACTACCCAGGCCATTCGAATaGGCGCAATTTACTCGTTTTAGCAACAGGAAGCAAATACATTTA | + |
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Preference number: 1 (lower is better) Translates to: RVRSHCSQGLPRPFE*AQFTRFSNRKQIHL Trigger: TAAATGTATTTGCTTCCTGTTGCTAAAACGAGTAAATTGCGCCCATTCGAATGGCCTGGGTAGTCCTTGACTGCAGTGGGAACGCACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR GCA 90 bp | CTCAGGTGGTGCCCGATCTCCTTTAAATCTTTGTCTTGCAGTAGCTaGAGTGGGTCAATAAAAGTTTGCTTCACATTAATATCCAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: LRWCPISFKSLSCSS*SGSIKVCFTLISRE Trigger: CTCTCTGGATATTAATGTGAAGCAAACTTTTATTGACCCACTGCAGCTACTGCAAGACAAAGATTTAAAGGAGATCGGGCACCACCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR GCA 90 bp | TCCAGCTTTCTCAGGTGGTGCCCGATCTCCTTTAAATCTTTGTCTTaGAGTAGCTGCAGTGGGTCAATAAAAGTTTGCTTCACATTAATA | + |
|
Preference number: 1 (lower is better) Translates to: SSFLRWCPISFKSLS*SSCSGSIKVCFTLI Trigger: TATTAATGTGAAGCAAACTTTTATTGACCCACTGCAGCTACTGCAAGACAAAGATTTAAAGGAGATCGGGCACCACCTGAGAAAGCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR GCA 90 bp | TTTAAATCTTTGTCTTGCAGTAGCTGCAGTGGGTCAATAAAAGTTTaGTTCACATTAATATCCAGAGAGTCTTTCACCTCAGCCATGAGT | + |
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Preference number: 1 (lower is better) Translates to: FKSLSCSSCSGSIKV*FTLISRESFTSAMS Trigger: ACTCATGGCTGAGGTGAAAGACTCTCTGGATATTAATGTGAAGCAAACTTTTATTGACCCACTGCAGCTACTGCAAGACAAAGATTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR CAA 90 bp | CACGACAGCAGGGCTGGTCCGAGGGAGTGTCAGTACCTGGTGTCTTaGATGAAGAGCTGGGTCCGACCCCATTGGCATCGGTGGAACTCA | + |
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Preference number: 2 (lower is better) Translates to: HDSRAGPRECQYLVS*MKSWVRPHWHRWNS Trigger: TGAGTTCCACCGATGCCAATGGGGTCGGACCCAGCTCTTCATCAAAGACACCAGGTACTGACACTCCCTCGGACCAGCCCTGCTGTCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR-3UTR GCA 90 bp | GCAACTCCAGCTTGCTCTGCAGCTCCTGGAGGATCTCTGTGGACTGCCTGTGATCTTCTCCGAGCTCCTTaGCATACTTCAGCATGCAGT | + |
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Preference number: 2 (lower is better) Translates to: ATPACSAAPGGSLWTACDLLRAP*HTSACS Trigger: ACTGCATGCTGAAGTATGGCAAGGAGCTCGGAGAAG...ATCACAGGCAGTCCACAGAGATCCTCCAGGAGCTGCAGAGCAAGCTGGAGTTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGGATCTTACCTACCCGCCGCTTTTTATAATCATAATCCAGGCGACGGCCTTCAAGCCTTCCGTCTGTaGGTAGCCAGTGGCCTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: RGSYLPAAFYNHNPGDGLQAFRL*VASGLH Trigger: GTGAAGGCCACTGGCTACCCACAGACGGAAGGCTTG...AAGGCCGTCGCCTGGATTATGATTATAAAAAGCGGCGGGTAGGTAAGATCCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR CAA 90 bp | ACATCTACCAACGAGTTGCCAAAAGCAGAGTCTTCTCCGAGCTCCTaGCCATACTTCAGCATGCAGTCCCCCAGCAAGCCTTCCGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: TSTNELPKAESSPSS*PYFSMQSPSKPSVC Trigger: ACAGACGGAAGGCTTGCTGGGGGACTGCATGCTGAAGTATGGCAAGGAGCTCGGAGAAGACTCTGCTTTTGGCAACTCGTTGGTAGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAACAAAACCTTTAGCTTTCATGGCTGCAAAGGGTGCGTTCCCACTGCAGTCTTCGCAACTCCAGCTTaGTCTGCAGCTCCTGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GNKTFSFHGCKGCVPTAVFATPA*SAAPGG Trigger: TCCTCCAGGAGCTGCAGAGCAAGCTGGAGTTGCGAA...GACTGCAGTGGGAACGCACCCTTTGCAGCCATGAAAGCTAAAGGTTTTGTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR-3UTR TCA 90 bp | CATACAAAAGTGATTAAGTGGGCCAGAGAGCGAGGATGTCACAGAACACCACACACACACATACAAAAGTaGTTAAGTGGGCCAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: HTKVIKWARERGCHRTPHTHIQK*LSGPES Trigger: GCTCTCTGGCCCACTTAATCACTTTTGTATGTGTGT...GTGTGGTGTTCTGTGACATCCTCGCTCTCTGGCCCACTTAATCACTTTTGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032874.14 ENSMUST00000177883.8 ENSMUST00000177895.8 ENSMUST00000178526.2 |
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| 3UTR-3UTR TCA 90 bp | ACACATACAAAAGTGATTAAGTGGGCCAGAGAGCGAGGATGTCACAGAACACCAACACACATACAAAAGTaGTTAAGTGGGCCAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: THTKVIKWARERGCHRTPTHIQK*LSGPES Trigger: GCTCTCTGGCCCACTTAATCACTTTTGTATGTGTGT...TGGTGTTCTGTGACATCCTCGCTCTCTGGCCCACTTAATCACTTTTGTATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032874.14 ENSMUST00000177883.8 ENSMUST00000177895.8 ENSMUST00000178526.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTGCCAATTCATTTCAGTTCTGAAGTTAGGTCCAAAAGACACATTTACGGAGAACTCCAGCTTGCTCTaGAGCTCCTGGAGGATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: WCQFISVLKLGPKDTFTENSSLL*SSWRIS Trigger: AGAGATCCTCCAGGAGCTGCAGAGCAAGCTGGAGTT...CTCCGTAAATGTGTCTTTTGGACCTAACTTCAGAACTGAAATGAATTGGCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAATTCTCGCTTGGGGACTTTGGATGCAAGAGATATTCGCAACTCCAGCTTGTTTAAATCTTTGTCTTaGAGTAGCTGCCCTCGGAGC | + |
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Preference number: 2 (lower is better) Translates to: MNSRLGTLDARDIRNSSLFKSLS*SSCPRS Trigger: GCTCCGAGGGCAGCTACTGCAAGACAAAGATTTAAA...CAAGCTGGAGTTGCGAATATCTCTTGCATCCAAAGTCCCCAAGCGAGAATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177883.8 |
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| 3UTR CCA 72 bp | AGTCCCCCAGCAAGCCTTCCGTCTGTGGGTAGCCAGTaGCCTTCACCTGCCCTCGGAGCTTCGACACAGTGT | + |
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Preference number: 3 (lower is better) Translates to: SPPASLPSVGSQ*PSPALGASTQC Trigger: ACACTGTGTCGAAGCTCCGAGGGCAGGTGAAGGCCACTGGCTACCCACAGACGGAAGGCTTGCTGGGGGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR GCA 72 bp | GGACTTTGGATGCAAGAGATATTCGCAACTCCAGCTTaGTCTGCAGCTCCTGGAGGATCTCTGTGGACTGCC | + |
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Preference number: 3 (lower is better) Translates to: GLWMQEIFATPA*SAAPGGSLWTA Trigger: GGCAGTCCACAGAGATCCTCCAGGAGCTGCAGAGCAAGCTGGAGTTGCGAATATCTCTTGCATCCAAAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR GCA 72 bp | GGAAACAAAACCTTTAGCTTTCATGGCTGCAAAGGGTaGGTTCCCACTGCAGTCAAGGACTACCCAGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: GNKTFSFHGCKG*VPTAVKDYPGH Trigger: ATGGCCTGGGTAGTCCTTGACTGCAGTGGGAACGCACCCTTTGCAGCCATGAAAGCTAAAGGTTTTGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAACTTCTCTACTGCTTGTCTGATTTCTTCCTCGGGGATCTTACCTACCCGCTCTTCTCCGAGCTCCTaGCCATACTTCAGCATGCAG | + |
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Preference number: 3 (lower is better) Translates to: SNFSTACLISSSGILPTRSSPSS*PYFSMQ Trigger: CTGCATGCTGAAGTATGGCAAGGAGCTCGGAGAAGA...GCGGGTAGGTAAGATCCCCGAGGAAGAAATCAGACAAGCAGTAGAGAAGTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR-3UTR CAA 90 bp | ATGTCAGGAAACAAAACCTTTAGCTTTCATGGCTGCAAAGGGTGCGTTCCCACTAGTGTGTCATGTTTATaGGGCTGTTCACAGGTAAGC | + |
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Preference number: 3 (lower is better) Translates to: MSGNKTFSFHGCKGCVPTSVSCL*GCSQVS Trigger: GCTTACCTGTGAACAGCCCAATAAACATGACACACT...AGTGGGAACGCACCCTTTGCAGCCATGAAAGCTAAAGGTTTTGTTTCCTGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR GCA 72 bp | CTCAGGTGGTGCCCGATCTCCTTTAAATCTTTGTCTTaGAGTAGCTGCAGTGGGTCAATAAAAGTTTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LRWCPISFKSLS*SSCSGSIKVCF Trigger: GAAGCAAACTTTTATTGACCCACTGCAGCTACTGCAAGACAAAGATTTAAAGGAGATCGGGCACCACCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR-3UTR CAA 90 bp | TGGTGCCAATTCATTTCAGTTCTGAAGTTAGGTCCAAAAGACACATTTACGGAGAGTGTGTCATGTTTATaGGGCTGTTCACAGGTAAGC | + |
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Preference number: 3 (lower is better) Translates to: WCQFISVLKLGPKDTFTESVSCL*GCSQVS Trigger: GCTTACCTGTGAACAGCCCAATAAACATGACACACT...CTCCGTAAATGTGTCTTTTGGACCTAACTTCAGAACTGAAATGAATTGGCACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR GCA 72 bp | TGCCCGATCTCCTTTAAATCTTTGTCTTGCAGTAGCTaGAGTGGGTCAATAAAAGTTTGCTTCACATTAATA | + |
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Preference number: 3 (lower is better) Translates to: CPISFKSLSCSS*SGSIKVCFTLI Trigger: TATTAATGTGAAGCAAACTTTTATTGACCCACTGCAGCTACTGCAAGACAAAGATTTAAAGGAGATCGGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR CAA 72 bp | AGGGCTGGTCCGAGGGAGTGTCAGTACCTGGTGTCTTaGATGAAGAGCTGGGTCCGACCCCATTGGCATCGG | + |
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Preference number: 4 (lower is better) Translates to: RAGPRECQYLVS*MKSWVRPHWHR Trigger: CCGATGCCAATGGGGTCGGACCCAGCTCTTCATCAAAGACACCAGGTACTGACACTCCCTCGGACCAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR CAA 72 bp | AACGAGTTGCCAAAAGCAGAGTCTTCTCCGAGCTCCTaGCCATACTTCAGCATGCAGTCCCCCAGCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: NELPKAESSPSS*PYFSMQSPSKP Trigger: AGGCTTGCTGGGGGACTGCATGCTGAAGTATGGCAAGGAGCTCGGAGAAGACTCTGCTTTTGGCAACTCGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| 3UTR CAA 72 bp | GGGACTTTGGATGCAAGAGATATTCGCAACTCCAGCTaGCTCTGCAGCTCCTGGAGGATCTCTGTGGACTGC | + |
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Preference number: 4 (lower is better) Translates to: GTLDARDIRNSS*LCSSWRISVDC Trigger: GCAGTCCACAGAGATCCTCCAGGAGCTGCAGAGCAAGCTGGAGTTGCGAATATCTCTTGCATCCAAAGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| CDS-3UTR CCA 90 bp | CACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTAGGTCCCCACGACAGCAGGGCTaGTCCGAGGGAGTGTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: HHTERALVPIHFSSEVRSPRQQG*SEGVSV Trigger: TACTGACACTCCCTCGGACCAGCCCTGCTGTCGTGG...GGACCTAACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000178526.2 ENSMUST00000179318.8 |
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| CDS-3UTR CCA 90 bp | GATGTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTCCACGACAGCAGGGCTaGTCCGAGGGAGTGTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: DVTEHHTERALVPIHFSSPRQQG*SEGVSV Trigger: TACTGACACTCCCTCGGACCAGCCCTGCTGTCGTGG...AGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000178526.2 ENSMUST00000179318.8 |
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| CDS-3UTR CCA 90 bp | GTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAACAAGCCTTCCGTCTGTaGGTAGCCAGTGGCCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: VTEHHTERALVPIHFSSEQAFRL*VASGLH Trigger: GTGAAGGCCACTGGCTACCCACAGACGGAAGGCTTG...TTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
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| CDS-3UTR CCA 90 bp | CAAGAGATATTCGCAACTCCAGCTTGCTCTGCAGCTCCTGGAGGATCTCTGTGGAGCTTAGCTCTGGATTaGGTTGGAGATACTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: QEIFATPACSAAPGGSLWSLALD*VGDTLW Trigger: CCACAGAGTATCTCCAACCCAATCCAGAGCTAAGCT...CCACAGAGATCCTCCAGGAGCTGCAGAGCAAGCTGGAGTTGCGAATATCTCTTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| 3UTR CAA 72 bp | ATGAGTTTCAGGGCCTCACCAACATCTACCAACGAGTaGCCAAAAGCAGAGTCTTCTCCGAGCTCCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: MSFRASPTSTNE*PKAESSPSSLP Trigger: TGGCAAGGAGCTCGGAGAAGACTCTGCTTTTGGCAACTCGTTGGTAGATGTTGGTGAGGCCCTGAAACTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
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| CDS-3UTR GCA 90 bp | ACACATACAAAAGTGATTAAGTGGGCCAGAGAGCGAGGATGTCACAGAACACCACTGGCTTTGTGGAACTaGTTCTTGAGCCCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: THTKVIKWARERGCHRTPLALWN*FLSPAT Trigger: GGTGGCTGGGCTCAAGAAGCAGTTCCACAAAGCCAG...TGGTGTTCTGTGACATCCTCGCTCTCTGGCCCACTTAATCACTTTTGTATGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| CDS-3UTR GCA 90 bp | ATGTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGCTGGCTTTGTGGAACTaGTTCTTGAGCCCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: MSQNTTLREHWCQFISVLLALWN*FLSPAT Trigger: GGTGGCTGGGCTCAAGAAGCAGTTCCACAAAGCCAG...CAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| CDS-3UTR GCA 90 bp | TCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTCGCAACTCCAGCTTaGTCTGCAGCTCCTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SQNTTLREHWCQFISVLKFATPA*SAAPGG Trigger: TCCTCCAGGAGCTGCAGAGCAAGCTGGAGTTGCGAA...CTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
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| CDS-3UTR TCA 90 bp | ACACATACAAAAGTGATTAAGTGGGCCAGAGAGCGAGGATGTCACAGAACACCACTTTCACCTCAGCCATaGGTTTCAGGGCCTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: THTKVIKWARERGCHRTPLSPQP*VSGPHQ Trigger: TTGGTGAGGCCCTGAAACTCATGGCTGAGGTGAAAG...TGGTGTTCTGTGACATCCTCGCTCTCTGGCCCACTTAATCACTTTTGTATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000178526.2 |
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| CDS-3UTR TCA 90 bp | ATGTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGCTTTCACCTCAGCCATaGGTTTCAGGGCCTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: MSQNTTLREHWCQFISVLLSPQP*VSGPHQ Trigger: TTGGTGAGGCCCTGAAACTCATGGCTGAGGTGAAAG...CAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000178526.2 ENSMUST00000179318.8 |
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| CDS-3UTR GCA 90 bp | AACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTAGGTCTGGCTTTGTGGAACTaGTTCTTGAGCCCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: NTTLREHWCQFISVLKLGLALWN*FLSPAT Trigger: GGTGGCTGGGCTCAAGAAGCAGTTCCACAAAGCCAG...ACCTAACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| CDS-3UTR GCA 90 bp | GTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAATGCCATACTTCAGCATaGAGTCCCCCAGCAAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VTEHHTERALVPIHFSSECHTSA*SPPASL Trigger: AAGGCTTGCTGGGGGACTGCATGCTGAAGTATGGCA...TTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
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| CDS-3UTR GCA 90 bp | GATGTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTAACTCCAGCTTGCTCTaGAGCTCCTGGAGGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DVTEHHTERALVPIHFSSNSSLL*SSWRIS Trigger: AGAGATCCTCCAGGAGCTGCAGAGCAAGCTGGAGTT...AGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
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| CDS-3UTR GCA 90 bp | ACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTTTCGCAACTCCAGCTTaGTCTGCAGCTCCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEHHTERALVPIHFSSEVFATPA*SAAPGG Trigger: TCCTCCAGGAGCTGCAGAGCAAGCTGGAGTTGCGAA...AACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
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| CDS-3UTR GCA 90 bp | CAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTATGCCATACTTCAGCATaGAGTCCCCCAGCAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLREHWCQFISVLKLCHTSA*SPPASL Trigger: AAGGCTTGCTGGGGGACTGCATGCTGAAGTATGGCA...TAACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
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| CDS-3UTR GCA 90 bp | ACACATACAAAAGTGATTAAGTGGGCCAGAGAGCGAGGATGTCACAGAACACCACTTCTCCGAGCTCCTTaGCATACTTCAGCATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: THTKVIKWARERGCHRTPLLRAP*HTSACS Trigger: ACTGCATGCTGAAGTATGGCAAGGAGCTCGGAGAAG...TGGTGTTCTGTGACATCCTCGCTCTCTGGCCCACTTAATCACTTTTGTATGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032874.14 |
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| CDS-3UTR GCA 90 bp | GTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAACTTCTCCGAGCTCCTTaGCATACTTCAGCATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTEHHTERALVPIHFSSELLRAP*HTSACS Trigger: ACTGCATGCTGAAGTATGGCAAGGAGCTCGGAGAAG...TTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
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| CDS-3UTR GCA 90 bp | AACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTAGGTAACTCCAGCTTGCTCTaGAGCTCCTGGAGGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NTTLREHWCQFISVLKLGNSSLL*SSWRIS Trigger: AGAGATCCTCCAGGAGCTGCAGAGCAAGCTGGAGTT...ACCTAACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
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| CDS-3UTR CCA 90 bp | ACCTACCCGCCGCTTTTTATAATCATAATCCAGGCGACGGCCTTCCAGCTTTCTTTTTCACTAAACAGCTaGCTGGCTTTGTGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TYPPLFIIIIQATAFQLSFSLNS*LALWNC Trigger: GCAGTTCCACAAAGCCAGCCAGCTGTTTAGTGAAAA...AGAAAGCTGGAAGGCCGTCGCCTGGATTATGATTATAAAAAGCGGCGGGTAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| CDS-3UTR CCA 90 bp | CACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTAGGTCCCTCTGTATGCTGGATTaGGTTGGAGATACTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HHTERALVPIHFSSEVRSLCMLD*VGDTLW Trigger: CCACAGAGTATCTCCAACCCAATCCAGCATACAGAG...GGACCTAACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
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| CDS-3UTR CCA 90 bp | TCAGGAAACAAAACCTTTAGCTTTCATGGCTGCAAAGGGTGCGTTCCCACTGCAACAAACACAGCCAGCTaGCTCACTTGCTCTACATCA | + |
|
Preference number: 4 (lower is better) Translates to: SGNKTFSFHGCKGCVPTATNTAS*LTCSTS Trigger: TGATGTAGAGCAAGTGAGCCAGCTGGCTGTGTTTGT...TGCAGTGGGAACGCACCCTTTGCAGCCATGAAAGCTAAAGGTTTTGTTTCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032874.14 |
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| CDS-3UTR CCA 90 bp | CACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTAGGTCCACAAACACAGCCAGCTaGCTCACTTGCTCTACATCA | + |
|
Preference number: 4 (lower is better) Translates to: HHTERALVPIHFSSEVRSTNTAS*LTCSTS Trigger: TGATGTAGAGCAAGTGAGCCAGCTGGCTGTGTTTGT...GGACCTAACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
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| CDS-3UTR CCA 90 bp | GTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAACCTGGAGGATCTCTGTaGACTGCCTGTGATAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VTEHHTERALVPIHFSSEPGGSL*TACDSL Trigger: TAGACTATCACAGGCAGTCCACAGAGATCCTCCAGG...TTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
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| CDS-3UTR CCA 90 bp | CACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTAGGTCCTTTTCACTAAACAGCTaGCTGGCTTTGTGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HHTERALVPIHFSSEVRSFSLNS*LALWNC Trigger: GCAGTTCCACAAAGCCAGCCAGCTGTTTAGTGAAAA...GGACCTAACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| CDS-3UTR CCA 90 bp | TGGGCGCAATTTACTCGTTTTAGCAACAGGAAGCAAATACATTTAACCAATGACCAAGCCTTCCGTCTGTaGGTAGCCAGTGGCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WAQFTRFSNRKQIHLTNDQAFRL*VASGLH Trigger: GTGAAGGCCACTGGCTACCCACAGACGGAAGGCTTG...GTCATTGGTTAAATGTATTTGCTTCCTGTTGCTAAAACGAGTAAATTGCGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032874.14 |
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| CDS-3UTR CCA 90 bp | CAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTACCTGGAGGATCTCTGTaGACTGCCTGTGATAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QNTTLREHWCQFISVLKLPGGSL*TACDSL Trigger: TAGACTATCACAGGCAGTCCACAGAGATCCTCCAGG...TAACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
||
| CDS-3UTR CCA 90 bp | ACACATACAAAAGTGATTAAGTGGGCCAGAGAGCGAGGATGTCACAGAACACCACATGTTCACAGGCTTTaGCATGAATTCTCGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: THTKVIKWARERGCHRTPHVHRL*HEFSLG Trigger: CCCAAGCGAGAATTCATGCCAAAGCCTGTGAACATG...TGGTGTTCTGTGACATCCTCGCTCTCTGGCCCACTTAATCACTTTTGTATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032874.14 |
||
| CDS-3UTR CCA 90 bp | GTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAACATGTTCACAGGCTTTaGCATGAATTCTCGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTEHHTERALVPIHFSSEHVHRL*HEFSLG Trigger: CCCAAGCGAGAATTCATGCCAAAGCCTGTGAACATG...TTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTTTCTCAGGTGGTGCCCGATCTCCTTTAAATCTTTGTCTTGCAGTAGCAGCTCTGGATTGGGTTaGAGATACTCTGTGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSFLRWCPISFKSLSCSSSSGLG*RYSVAF Trigger: AAAAGCCACAGAGTATCTCCAACCCAATCCAGAGCT...GCTACTGCAAGACAAAGATTTAAAGGAGATCGGGCACCACCTGAGAAAGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGTTCGGCCAACTCCTTTaGCTCTTCAAACTTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: MSQNTTLREHWCQFISVLFGQLL*LFKLLY Trigger: GTAGAGAAGTTTGAAGAGTCAAAGGAGTTGGCCGAA...CAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000178526.2 ENSMUST00000179318.8 |
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| CDS-3UTR TCA 90 bp | ATAATGTCAGGAAACAAAACCTTTAGCTTTCATGGCTGCAAAGGGTGCGTTCCCTTCGGCCAACTCCTTTaGCTCTTCAAACTTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: IMSGNKTFSFHGCKGCVPFGQLL*LFKLLY Trigger: GTAGAGAAGTTTGAAGAGTCAAAGGAGTTGGCCGAA...GGGAACGCACCCTTTGCAGCCATGAAAGCTAAAGGTTTTGTTTCCTGACATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032874.14 |
||
| CDS-3UTR GCA 90 bp | TCAGGAAACAAAACCTTTAGCTTTCATGGCTGCAAAGGGTGCGTTCCCACTGCATTGTCTTGCAGTAGCTaGAGTGGGTCAATAAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGNKTFSFHGCKGCVPTALSCSS*SGSIKV Trigger: AACTTTTATTGACCCACTGCAGCTACTGCAAGACAA...TGCAGTGGGAACGCACCCTTTGCAGCCATGAAAGCTAAAGGTTTTGTTTCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032874.14 |
||
| CDS-3UTR CCA 90 bp | GACCAGAGGCCATCAATAATGTCAGGAAACAAAACCTTTAGCTTTCATGGCTGCTTTTCACTAAACAGCTaGCTGGCTTTGTGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DQRPSIMSGNKTFSFHGCFSLNS*LALWNC Trigger: GCAGTTCCACAAAGCCAGCCAGCTGTTTAGTGAAAA...GCAGCCATGAAAGCTAAAGGTTTTGTTTCCTGACATTATTGATGGCCTCTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000177883.8 ENSMUST00000177895.8 |
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| CDS-3UTR CCA 90 bp | GTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAATATGCTGGATTGGGTTaGAGATACTCTGTGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTEHHTERALVPIHFSSEYAGLG*RYSVAF Trigger: AAAAGCCACAGAGTATCTCCAACCCAATCCAGCATA...TTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
||
| 3UTR CAA 72 bp | AGCTTTCTCAGGTGGTGCCCGATCTCCTTTAAATCTTaGTCTTGCAGTAGCTGCAGTGGGTCAATAAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFLRWCPISFKS*SCSSCSGSIKV Trigger: AACTTTTATTGACCCACTGCAGCTACTGCAAGACAAAGATTTAAAGGAGATCGGGCACCACCTGAGAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177895.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGTTGTCTTGCAGTAGCTaGAGTGGGTCAATAAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSQNTTLREHWCQFISVLLSCSS*SGSIKV Trigger: AACTTTTATTGACCCACTGCAGCTACTGCAAGACAA...CAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000178526.2 ENSMUST00000179318.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCAGGAAACAAAACCTTTAGCTTTCATGGCTGCAAAGGGTGCGTTCCCACTTTTAAATCTTTGTCTTaGAGTAGCTGCAGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSGNKTFSFHGCKGCVPTFKSLS*SSCSGS Trigger: TGACCCACTGCAGCTACTGCAAGACAAAGATTTAAA...AGTGGGAACGCACCCTTTGCAGCCATGAAAGCTAAAGGTTTTGTTTCCTGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032874.14 |
||
| CDS-3UTR GCA 90 bp | ACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTTTGTCTTGCAGTAGCTaGAGTGGGTCAATAAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TEHHTERALVPIHFSSEVLSCSS*SGSIKV Trigger: AACTTTTATTGACCCACTGCAGCTACTGCAAGACAA...AACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000178526.2 ENSMUST00000179318.8 |
||
| CDS-3UTR GCA 90 bp | AACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTAGGTTTTAAATCTTTGTCTTaGAGTAGCTGCAGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTTLREHWCQFISVLKLGFKSLS*SSCSGS Trigger: TGACCCACTGCAGCTACTGCAAGACAAAGATTTAAA...ACCTAACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000178526.2 ENSMUST00000179318.8 |
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| CDS-3UTR GCA 90 bp | ACACATACAAAAGTGATTAAGTGGGCCAGAGAGCGAGGATGTCACAGAACACCATTCAAACTTCTCTACTaGTTGTCTGATTTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: THTKVIKWARERGCHRTPFKLLY*LSDFFL Trigger: GAGGAAGAAATCAGACAAGCAGTAGAGAAGTTTGAA...TGGTGTTCTGTGACATCCTCGCTCTCTGGCCCACTTAATCACTTTTGTATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000178526.2 |
||
| CDS-3UTR GCA 90 bp | GAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTAGGTTCAAACTTCTCTACTaGTTGTCTGATTTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EHHTERALVPIHFSSEVRFKLLY*LSDFFL Trigger: GAGGAAGAAATCAGACAAGCAGTAGAGAAGTTTGAA...CCTAACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032874.14 ENSMUST00000178526.2 ENSMUST00000179318.8 |
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| CDS-3UTR CCA 90 bp | TTCGAATGGGCGCAATTTACTCGTTTTAGCAACAGGAAGCAAATACATTTAACCAGCTTAGCTCTGGATTaGGTTGGAGATACTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FEWAQFTRFSNRKQIHLTSLALD*VGDTLW Trigger: CCACAGAGTATCTCCAACCCAATCCAGAGCTAAGCT...GGTTAAATGTATTTGCTTCCTGTTGCTAAAACGAGTAAATTGCGCCCATTCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
||
| CDS-3UTR CCA 90 bp | TTCGAATGGGCGCAATTTACTCGTTTTAGCAACAGGAAGCAAATACATTTAACCAGCTCTGGATTGGGTTaGAGATACTCTGTGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FEWAQFTRFSNRKQIHLTSSGLG*RYSVAF Trigger: AAAAGCCACAGAGTATCTCCAACCCAATCCAGAGCT...GGTTAAATGTATTTGCTTCCTGTTGCTAAAACGAGTAAATTGCGCCCATTCGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177883.8 ENSMUST00000177895.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGAAGTTAGGTCCAAAAGACACATTTACGGAGGTAAAGGCACAATGACTTTTAAATCTTTGTCTTaGAGTAGCTGCAGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSEVRSKRHIYGGKGTMTFKSLS*SSCSGS Trigger: TGACCCACTGCAGCTACTGCAAGACAAAGATTTAAA...AGTCATTGTGCCTTTACCTCCGTAAATGTGTCTTTTGGACCTAACTTCAGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178526.2 |
||
| CDS-3UTR CCA 90 bp | TTCGAATGGGCGCAATTTACTCGTTTTAGCAACAGGAAGCAAATACATTTAACCTATGCTGGATTGGGTTaGAGATACTCTGTGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FEWAQFTRFSNRKQIHLTYAGLG*RYSVAF Trigger: AAAAGCCACAGAGTATCTCCAACCCAATCCAGCATA...GGTTAAATGTATTTGCTTCCTGTTGCTAAAACGAGTAAATTGCGCCCATTCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032874.14 |
||
| CDS-3UTR GCA 90 bp | CCATTCGAATGGGCGCAATTTACTCGTTTTAGCAACAGGAAGCAAATACATTTATTCAAACTTCTCTACTaGTTGTCTGATTTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PFEWAQFTRFSNRKQIHLFKLLY*LSDFFL Trigger: GAGGAAGAAATCAGACAAGCAGTAGAGAAGTTTGAA...TAAATGTATTTGCTTCCTGTTGCTAAAACGAGTAAATTGCGCCCATTCGAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032874.14 |
||
| CDS-3UTR CAA 90 bp | ATGTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGATTCGCAACTCCAGCTaGCTCTGCAGCTCCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MSQNTTLREHWCQFISVLIRNSS*LCSSWR Trigger: CCTCCAGGAGCTGCAGAGCAAGCTGGAGTTGCGAAT...CAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTATTCGCAACTCCAGCTaGCTCTGCAGCTCCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TEHHTERALVPIHFSSEVIRNSS*LCSSWR Trigger: CCTCCAGGAGCTGCAGAGCAAGCTGGAGTTGCGAAT...AACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
||
| CDS-3UTR CAA 90 bp | GTCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAATCTTCTCCGAGCTCCTaGCCATACTTCAGCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VTEHHTERALVPIHFSSESSPSS*PYFSMQ Trigger: CTGCATGCTGAAGTATGGCAAGGAGCTCGGAGAAGA...TTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
||
| CDS-3UTR CAA 90 bp | TCACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGCAGTACCTGGTGTCTTaGATGAAGAGCTGGGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SQNTTLREHWCQFISVLKQYLVS*MKSWVR Trigger: TCGGACCCAGCTCTTCATCAAAGACACCAGGTACTG...CTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
||
| CDS-3UTR CAA 90 bp | GACCAGAGGCCATCAATAATGTCAGGAAACAAAACCTTTAGCTTTCATGGCTGCTCTTCTCCGAGCTCCTaGCCATACTTCAGCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DQRPSIMSGNKTFSFHGCSSPSS*PYFSMQ Trigger: CTGCATGCTGAAGTATGGCAAGGAGCTCGGAGAAGA...GCAGCCATGAAAGCTAAAGGTTTTGTTTCCTGACATTATTGATGGCCTCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032874.14 |
||
| CDS-3UTR CAA 90 bp | GACCAGAGGCCATCAATAATGTCAGGAAACAAAACCTTTAGCTTTCATGGCTGCCAGTACCTGGTGTCTTaGATGAAGAGCTGGGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: DQRPSIMSGNKTFSFHGCQYLVS*MKSWVR Trigger: TCGGACCCAGCTCTTCATCAAAGACACCAGGTACTG...GCAGCCATGAAAGCTAAAGGTTTTGTTTCCTGACATTATTGATGGCCTCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032874.14 |
||
| CDS-3UTR CAA 90 bp | ACAGAACACCACACTGAGAGAGCACTGGTGCCAATTCATTTCAGTTCTGAAGTTGTATGCTGGATTGGGTaGGAGATACTCTGTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TEHHTERALVPIHFSSEVVCWIG*EILCGF Trigger: AAAGCCACAGAGTATCTCCAACCCAATCCAGCATAC...AACTTCAGAACTGAAATGAATTGGCACCAGTGCTCTCTCAGTGTGGTGTTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
||
| CDS TCA 72 bp | GTATGCTGGATTGGGTTGGAGATACTCTGTGGCTTTTaGAAGGATTTCTGCAACAGCTTTACTGGTGATATC | + |
|
Preference number: 6 (lower is better) Translates to: VCWIGLEILCGF*KDFCNSFTGDI Trigger: GATATCACCAGTAAAGCTGTTGCAGAAATCCTTTCAAAAGCCACAGAGTATCTCCAACCCAATCCAGCATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032874.14 ENSMUST00000179318.8 |
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