Pregenerated sensors for SH3GL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028488Ensembl transcript IDs: ENSMUST00000030212.15, ENSMUST00000107184.8, ENSMUST00000107188.10, ENSMUST00000107189.8, ENSMUST00000133109.2
Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAACCCAGGGCACGTGTGGGCTTGGTGACTCATCCACTGCGGCCTaGATTCGTGATGTATTGGAAGCAGCATTACCAAAGCAGTGGTTA | + |
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Preference number: 1 (lower is better) Translates to: STQGTCGLGDSSTAA*IRDVLEAALPKQWL Trigger: TAACCACTGCTTTGGTAATGCTGCTTCCAATACATCACGAATGCAGGCCGCAGTGGATGAGTCACCAAGCCCACACGTGCCCTGGGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR TCA 90 bp | CTGGAGACCTTGAGATGGCCCCTGGGTGAGAGACAATATCTTCAGTaGGGAGAGTTTTTCTGCCATGTGGTTCACAGGCATGTTACCAGG | + |
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Preference number: 1 (lower is better) Translates to: LETLRWPLGERQYLQ*GEFFCHVVHRHVTR Trigger: CCTGGTAACATGCCTGTGAACCACATGGCAGAAAAACTCTCCTCACTGAAGATATTGTCTCTCACCCAGGGGCCATCTCAAGGTCTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR CCA 90 bp | CTGAGAACTGTGAAGCCAGTTCTGGGACTCCTGGCTAGTCTCAGATaGTGTTTTAAAGCATGTACCAGGCCCACTGGCCTTGGAAGATAC | + |
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Preference number: 1 (lower is better) Translates to: LRTVKPVLGLLASLR*CFKACTRPTGLGRY Trigger: GTATCTTCCAAGGCCAGTGGGCCTGGTACATGCTTTAAAACACCATCTGAGACTAGCCAGGAGTCCCAGAACTGGCTTCACAGTTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR TCA 90 bp | TTGGTAGGTGTCTCACTAGAGAACCAAAAAGAGGATGCAAAGCCATaGGGAGCTCTCTCTTTCTCGATAGGGAAGCAGAAAGTGGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: LVGVSLENQKEDAKP*GALSFSIGKQKVED Trigger: GTCCTCCACTTTCTGCTTCCCTATCGAGAAAGAGAGAGCTCCTCATGGCTTTGCATCCTCTTTTTGGTTCTCTAGTGAGACACCTACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR GCA 90 bp | GTGGGAAGGAGCGATGCTCACTGTCTTGTTCTATGGAGTGGGAAATaGTTACTAGTGTTTCTCTCCTACGTCTTTGTGGTAAAGGGACTC | + |
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Preference number: 1 (lower is better) Translates to: VGRSDAHCLVLWSGK*LLVFLSYVFVVKGL Trigger: GAGTCCCTTTACCACAAAGACGTAGGAGAGAAACACTAGTAAGCATTTCCCACTCCATAGAACAAGACAGTGAGCATCGCTCCTTCCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR GCA 90 bp | CAGCAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACTaGGTCGAGGAGTCAGGGCCCAGTGAAGCTGAACATCATGATGAA | + |
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Preference number: 1 (lower is better) Translates to: QQSFPDVEDLNSENN*VEESGPSEAEHHDE Trigger: TTCATCATGATGTTCAGCTTCACTGGGCCCTGACTCCTCGACGCAGTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| 3UTR CCA 90 bp | ATTGAAATGCTGGCAGGAATGGTTCTGGTTTGGCTTTGGAATGTATaGATAAGTGACTACTCTGTGATCCCCAGAGGCCCAGAAATGGGT | + |
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Preference number: 1 (lower is better) Translates to: IEMLAGMVLVWLWNV*ISDYSVIPRGPEMG Trigger: ACCCATTTCTGGGCCTCTGGGGATCACAGAGTAGTCACTTATCCATACATTCCAAAGCCAAACCAGAACCATTCCTGCCAGCATTTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR CCA 90 bp | TTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAATATCCTaGGAAGAAGAACTGAGAGTGCAGCAGAGTTTCCCAGATGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: LCHVEREALVSLRIS*EEELRVQQSFPDVE Trigger: TTCCACATCTGGGAAACTCTGCTGCACTCTCAGTTCTTCTTCCCAGGATATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| 3UTR CCA 90 bp | AGTAAACGTGGGAAGGAGCGATGCTCACTGTCTTGTTCTATGGAGTaGGAAATGCTTACTAGTGTTTCTCTCCTACGTCTTTGTGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: SKRGKERCSLSCSME*EMLTSVSLLRLCGK Trigger: TTTACCACAAAGACGTAGGAGAGAAACACTAGTAAGCATTTCCCACTCCATAGAACAAGACAGTGAGCATCGCTCCTTCCCACGTTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR TCA 90 bp | TTCGTCTTCAGCAATGTTTATTGGAAACAGCAGTGCTTCCCGTGGTaGGTTTATACATTAAGCAGGAAGATTTGCCTTTCACTCCACACG | + |
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Preference number: 1 (lower is better) Translates to: FVFSNVYWKQQCFPW*VYTLSRKICLSLHT Trigger: CGTGTGGAGTGAAAGGCAAATCTTCCTGCTTAATGTATAAACTCACCACGGGAAGCACTGCTGTTTCCAATAAACATTGCTGAAGACGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR GCA 90 bp | AATGATGTTCAAGGAACACAAACAAGTAAACGTGGGAAGGAGCGATaGTCACTGTCTTGTTCTATGGAGTGGGAAATGCTTACTAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: NDVQGTQTSKRGKER*SLSCSMEWEMLTSV Trigger: AACACTAGTAAGCATTTCCCACTCCATAGAACAAGACAGTGAGCATCGCTCCTTCCCACGTTTACTTGTTTGTGTTCCTTGAACATCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR TCA 90 bp | AGACAGACATATAAAATGATGGTCATAATGGCCACAGTGAGAGGCTaGGTTAGGACATATCAATGGTATCCATGGATACTGCATCTCGTA | + |
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Preference number: 1 (lower is better) Translates to: RQTYKMMVIMATVRG*VRTYQWYPWILHLV Trigger: TACGAGATGCAGTATCCATGGATACCATTGATATGTCCTAACTCAGCCTCTCACTGTGGCCATTATGACCATCATTTTATATGTCTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR CCA 90 bp | AATAATTTCACCAGCAGTTATAATTCTGAGTTCTCATTCAATACATaGACTTTTAGGTGTGTGTGTGTGAGTGAGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: NNFTSSYNSEFSFNT*TFRCVCVSECVCVC Trigger: ACACACACACACACACTCACTCACACACACACACCTAAAAGTCCATGTATTGAATGAGAACTCAGAATTATAACTGCTGGTGAAATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR TCA 90 bp | GCATATCATGTGAGTGCTTTTGTTATTGGGTTACCTCACTCAGGATaGTATTCTCCAGGTCCATCCATAAATTTATTGTTTTTAATAGCT | + |
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Preference number: 1 (lower is better) Translates to: AYHVSAFVIGLPHSG*YSPGPSINLLFLIA Trigger: AGCTATTAAAAACAATAAATTTATGGATGGACCTGGAGAATATCATCCTGAGTGAGGTAACCCAATAACAAAAGCACTCACATGATATGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR CAA 90 bp | CGTCTCCTGGAGGAGCACACGGGTCAACCCAGGGCACGTGTGGGCTaGGTGACTCATCCACTGCGGCCTGCATTCGTGATGTATTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: RLLEEHTGQPRARVG*VTHPLRPAFVMYWK Trigger: CTTCCAATACATCACGAATGCAGGCCGCAGTGGATGAGTCACCAAGCCCACACGTGCCCTGGGTTGACCCGTGTGCTCCTCCAGGAGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR TCA 90 bp | CTGCCATGTGGTTCACAGGCATGTTACCAGGAACCACAGCCTCCTGAGAACTGTTGGGTCAGAAGGAGGTaGGCCAGCCAGCACAGGATC | + |
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Preference number: 2 (lower is better) Translates to: LPCGSQACYQEPQPPENCWVRRR*ASQHRI Trigger: GATCCTGTGCTGGCTGGCTCACCTCCTTCTGACCCA...ACAGTTCTCAGGAGGCTGTGGTTCCTGGTAACATGCCTGTGAACCACATGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR CCA 90 bp | TGCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGGAAGCAGCACGCTGGAGACCTTGAGATaGCCCCTGGGTGAGAGACAA | + |
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Preference number: 2 (lower is better) Translates to: CLSLHTIHYRKWHIGSSTLETLR*PLGERQ Trigger: TTGTCTCTCACCCAGGGGCCATCTCAAGGTCTCCAG...CGTGCTGCTTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR TCA 90 bp | CGTGTGAGCATGTGCTCATGTGAAAGACTGAGACAGAGACAGAGACAGACAGAGGAGGATGCAAAGCCATaGGGAGCTCTCTCTTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: RVSMCSCERLRQRQRQTEEDAKP*GALSFS Trigger: CGAGAAAGAGAGAGCTCCTCATGGCTTTGCATCCTC...CTCTGTCTGTCTCTGTCTCTGTCTCAGTCTTTCACATGAGCACATGCTCACACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCCCCTTCCTGTACCCTTCAGAAACGGGCTACGTATATACACAGCTTCTGTACAGGCCCACTGGCCTTaGAAGATACCATCTATCACC | + |
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Preference number: 2 (lower is better) Translates to: CPLPVPFRNGLRIYTASVQAHWP*KIPSIT Trigger: GGTGATAGATGGTATCTTCCAAGGCCAGTGGGCCTG...TACAGAAGCTGTGTATATACGTAGCCCGTTTCTGAAGGGTACAGGAAGGGGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR TCA 90 bp | GCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGGAAGCAGCACGCTTGCCAACAATTCTGTaGCTCACATATTTAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: AFHSTRSTTASGISEAARLPTIL*LTYLGR Trigger: CCTTCCTAAATATGTGAGTCACAGAATTGTTGGCAA...GCGTGCTGCTTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR CAA 90 bp | ACAGCAGTGCTTCCCGTGGTGAGTTTATACATTAAGCAGGAAGATTaGCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGG | + |
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Preference number: 2 (lower is better) Translates to: TAVLPVVSLYIKQED*PFTPHDPLPQVAYR Trigger: CCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCAAATCTTCCTGCTTAATGTATAAACTCACCACGGGAAGCACTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCCCAGAAATGGGTACTAGCCAAATCTGCCACTTTGAAACATCCCCAATCGGTAGTTCCTGTGATTaGCCTGAAGTAGAGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: RGPEMGTSQICHFETSPIGSSCD*PEVELC Trigger: ACAGAGCTCTACTTCAGGGCAATCACAGGAACTACC...GATTGGGGATGTTTCAAAGTGGCAGATTTGGCTAGTACCCATTTCTGGGCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGCTTCTGTACAGCAAGGAATCTGAGCTTAGAGACCAGATTTCTTCCCAATGGGAGGGAAGAAAACTaGCCATGTCTCAGAAGTATG | + |
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Preference number: 2 (lower is better) Translates to: HSFCTARNLSLETRFLPNGREEN*PCLRSM Trigger: CATACTTCTGAGACATGGCCAGTTTTCTTCCCTCCC...ATTGGGAAGAAATCTGGTCTCTAAGCTCAGATTCCTTGCTGTACAGAAGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR CAA 90 bp | GCTAGAGAAAAAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTaGGTGTCTCTCAGAATATCCTGGGAAGAAGAACTGAGAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: AREKVVILCHVEREA*VSLRISWEEELRVQ Trigger: CTGCACTCTCAGTTCTTCTTCCCAGGATATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTTTTCTCTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTGTCGTGTCTGTAGTCCCACTTGGTAATCTTGCATGCATAATACTAACTGCCACAGTGAGAGGCTaGGTTAGGACATATCAATGG | + |
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Preference number: 2 (lower is better) Translates to: FSVVSVVPLGNLACIILTATVRG*VRTYQW Trigger: CCATTGATATGTCCTAACTCAGCCTCTCACTGTGGC...AGTTAGTATTATGCATGCAAGATTACCAAGTGGGACTACAGACACGACAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR-3UTR GCA 90 bp | GCATATGCAGCCACATACCTTAAACTGCTAAGCACAAAAATCATCTTTATTTGGCCCTCATCTGCCAAGTaGTTAACAGCAGGGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: AYAATYLKLLSTKIIFIWPSSAK*LTAGRE Trigger: TTCCCTCCCTGCTGTTAAGCACTTGGCAGATGAGGG...CCAAATAAAGATGATTTTTGTGCTTAGCAGTTTAAGGTATGTGGCTGCATATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR CCA 90 bp | TTAAGCAGGAAGATTTGCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATGCATTACCAAAGCAGTaGTTAAACTTAACTATCTGG | + |
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Preference number: 2 (lower is better) Translates to: LSRKICLSLHTIHYRKWHALPKQ*LNLTIW Trigger: CCAGATAGTTAAGTTTAACCACTGCTTTGGTAATGC...ATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCAAATCTTCCTGCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR TCA 90 bp | GTAATGACTGGAGTGGAAAAGGGGTTTGCATATGCAGCCACATACCTTAAACTGAGACAATATCTTCAGTaGGGAGAGTTTTTCTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: VMTGVEKGFAYAATYLKLRQYLQ*GEFFCH Trigger: ATGGCAGAAAAACTCTCCTCACTGAAGATATTGTCT...CAGTTTAAGGTATGTGGCTGCATATGCAAACCCCTTTTCCACTCCAGTCATTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR GCA 90 bp | CAGCTAGACCAAGAAATCATTCTAGTTCTGATAGCTTGGAATCAGTTAGAGGGAGAACCAAAAAGAGGATaGAAAGCCATGAGGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: QLDQEIILVLIAWNQLEGEPKRG*KAMRSS Trigger: AGAGCTCCTCATGGCTTTGCATCCTCTTTTTGGTTC...TCCCTCTAACTGATTCCAAGCTATCAGAACTAGAATGATTTCTTGGTCTAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR-3UTR GCA 90 bp | GTTACCTCACTCAGGATGATATTCTCCAGGTCCATCCATAAATTTATTGTTTTTCCAACCTCTCCAACGTaGCACATGAAAGCTTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: VTSLRMIFSRSIHKFIVFPTSPT*HMKAWW Trigger: CCACCAAGCTTTCATGTGGCACGTTGGAGAGGTTGG...AAAAACAATAAATTTATGGATGGACCTGGAGAATATCATCCTGAGTGAGGTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR-3UTR CCA 90 bp | GAACAAAACGAAAACCCAACACTGATCAGCGTACACAGCACTGTACACACAAAAAGTTTTTCTGCCATGTaGTTCACAGGCATGTTACCA | + |
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Preference number: 2 (lower is better) Translates to: EQNENPTLISVHSTVHTKSFSAM*FTGMLP Trigger: TGGTAACATGCCTGTGAACCACATGGCAGAAAAACT...TTTTGTGTGTACAGTGCTGTGTACGCTGATCAGTGTTGGGTTTTCGTTTTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTATGGAGTGGGAAATGCTTACTAGTGTTTCTCTCCTACGTCTTTGTGGTGAATGGACTGATTCCTaGGTAAGTAAACAGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: CSMEWEMLTSVSLLRLCGEWTDS*VSKQRR Trigger: CCTTCTCTGTTTACTTACCCAGGAATCAGTCCATTC...ACCACAAAGACGTAGGAGAGAAACACTAGTAAGCATTTCCCACTCCATAGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR GCA 90 bp | AAAGTAATGACTGGAGTGGAAAAGGGGTTTGCATATGCAGCCACATACCTTAAAGTGAGGGGATGTTTTTaGCAACAATTCTGTGACTCA | + |
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Preference number: 2 (lower is better) Translates to: KVMTGVEKGFAYAATYLKVRGCF*QQFCDS Trigger: TGAGTCACAGAATTGTTGGCAAAAACATCCCCTCAC...TTTAAGGTATGTGGCTGCATATGCAAACCCCTTTTCCACTCCAGTCATTACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR CCA 90 bp | GTAATGACTGGAGTGGAAAAGGGGTTTGCATATGCAGCCACATACCTTAAACTGTCTTGTTCTATGGAGTaGGAAATGCTTACTAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: VMTGVEKGFAYAATYLKLSCSME*EMLTSV Trigger: AACACTAGTAAGCATTTCCCACTCCATAGAACAAGA...CAGTTTAAGGTATGTGGCTGCATATGCAAACCCCTTTTCCACTCCAGTCATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR CCA 90 bp | AAGGACATAGGACCTCTAGAAAGGATCCAATTAATGAGGCATCGAGAACCAACCTTTGTGAACATAGATTaGTGTGTTGCCACCTTCATT | + |
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Preference number: 2 (lower is better) Translates to: KDIGPLERIQLMRHREPTFVNID*CVATFI Trigger: AATGAAGGTGGCAACACACCAATCTATGTTCACAAA...GGTTGGTTCTCGATGCCTCATTAATTGGATCCTTTCTAGAGGTCCTATGTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR CAA 90 bp | ACAAGATCAAGTATGCTAGAGAAAAAGTGGTTATCTTATGCCATGTaGAAAGAGAAGCCTTGGTGTCTCTCAGAATATCCTGGGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: TRSSMLEKKWLSYAM*KEKPWCLSEYPGKK Trigger: CTTCTTCCCAGGATATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTTTTCTCTAGCATACTTGATCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| 3UTR CAA 90 bp | GTACTAGCCAAATCTGCCACTTTGAAACATCCCCAATCCACTGCTTaGATTAATAGTCATATTCGTGTGAAGAAACCAGGATTTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: VLAKSATLKHPQSTA*INSHIRVKKPGFSL Trigger: AAGGGAAAATCCTGGTTTCTTCACACGAATATGACTATTAATCAAAGCAGTGGATTGGGGATGTTTCAAAGTGGCAGATTTGGCTAGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR-3UTR TCA 90 bp | GAGACAGCTAGACCAAGAAATCATTCTAGTTCTGATAGCTTGGAATCAGTTAGAAAAAGAGGTGACATTTaGGGTTGCTCATGCCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: ETARPRNHSSSDSLESVRKRGDI*GCSCPN Trigger: ATTTGGGCATGAGCAACCTCAAATGTCACCTCTTTT...TCTAACTGATTCCAAGCTATCAGAACTAGAATGATTTCTTGGTCTAGCTGTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTGTCGTGTCTGTAGTCCCACTTGGTAATCTTGCATGCATAATACTAACTGGAATGGTTCTGGTTTaGCTTTGGAATGTATGGATA | + |
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Preference number: 2 (lower is better) Translates to: FSVVSVVPLGNLACIILTGMVLV*LWNVWI Trigger: TATCCATACATTCCAAAGCCAAACCAGAACCATTCC...AGTTAGTATTATGCATGCAAGATTACCAAGTGGGACTACAGACACGACAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR CAA 90 bp | GAGAGAGAGACAGCTAGACCAAGAAATCATTCTAGTTCTGATAGCTaGGAATCAGTTAGAGGGACTCCCCTAAATTTTATTCAAATCAAA | + |
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Preference number: 2 (lower is better) Translates to: ERETARPRNHSSSDS*ESVRGTPLNFIQIK Trigger: TTTGATTTGAATAAAATTTAGGGGAGTCCCTCTAACTGATTCCAAGCTATCAGAACTAGAATGATTTCTTGGTCTAGCTGTCTCTCTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR-3UTR GCA 90 bp | TTGAAACATCCCCAATCCACTGCTTTGATTAATAGTCATATTCGTGTGAAGAAACATATTCTGCCCTGTTaGGCAGAAATAAGCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LKHPQSTALINSHIRVKKHILPC*AEISFS Trigger: GGAAAAGCTTATTTCTGCGCAACAGGGCAGAATATG...TTTCTTCACACGAATATGACTATTAATCAAAGCAGTGGATTGGGGATGTTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR-3UTR TCA 90 bp | ACATATCAATGGTATCCATGGATACTGCATCTCGTAGCAAGGCTTAAATCATATAGTGAAGTCATATTGTaGTGCCTAAGGACTAAATTC | + |
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Preference number: 2 (lower is better) Translates to: TYQWYPWILHLVARLKSYSEVIL*CLRTKF Trigger: GAATTTAGTCCTTAGGCATCACAATATGACTTCACT...ATATGATTTAAGCCTTGCTACGAGATGCAGTATCCATGGATACCATTGATATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR-3UTR GCA 90 bp | GTTACCTCACTCAGGATGATATTCTCCAGGTCCATCCATAAATTTATTGTTTTTACAAAGGAGGTGATTTaGATGAACAAGCAGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: VTSLRMIFSRSIHKFIVFTKEVI*MNKQKV Trigger: GACTTTCTGCTTGTTCATGCAAATCACCTCCTTTGT...AAAAACAATAAATTTATGGATGGACCTGGAGAATATCATCCTGAGTGAGGTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR-3UTR CCA 90 bp | GTTACCTCACTCAGGATGATATTCTCCAGGTCCATCCATAAATTTATTGTTTTTTTCTCATTCAATACATaGACTTTTAGGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: VTSLRMIFSRSIHKFIVFFSFNT*TFRCVC Trigger: ACACACACACCTAAAAGTCCATGTATTGAATGAGAA...AAAAACAATAAATTTATGGATGGACCTGGAGAATATCATCCTGAGTGAGGTAAC 34% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| 3UTR GCA 72 bp | GGCACGTGTGGGCTTGGTGACTCATCCACTGCGGCCTaGATTCGTGATGTATTGGAAGCAGCATTACCAAAG | + |
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Preference number: 3 (lower is better) Translates to: GTCGLGDSSTAA*IRDVLEAALPK Trigger: CTTTGGTAATGCTGCTTCCAATACATCACGAATGCAGGCCGCAGTGGATGAGTCACCAAGCCCACACGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| 3UTR-3UTR CAA 90 bp | GCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGGAAGCAGCACGCCAGCCAACATACAGATaGCTCACCATCTCACTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: AFHSTRSTTASGISEAARQPTYR*LTISLR Trigger: TCTGAGTGAGATGGTGAGCAATCTGTATGTTGGCTG...GCGTGCTGCTTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR CCA 72 bp | GTGAAGCCAGTTCTGGGACTCCTGGCTAGTCTCAGATaGTGTTTTAAAGCATGTACCAGGCCCACTGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VKPVLGLLASLR*CFKACTRPTGL Trigger: AAGGCCAGTGGGCCTGGTACATGCTTTAAAACACCATCTGAGACTAGCCAGGAGTCCCAGAACTGGCTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR CCA 72 bp | GACCCAACCTCTCCAACGTGCCACATGAAAGCTTGGTaGTATGTCGTTCCAAGTCAGATGGAGAGGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DPTSPTCHMKAW*YVVPSQMERKA Trigger: AGCTTTCCTCTCCATCTGACTTGGAACGACATACCACCAAGCTTTCATGTGGCACGTTGGAGAGGTTGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGGAAGCAGCACGTGCATTCGTGATGTATaGGAAGCAGCATTACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: CLSLHTIHYRKWHIGSSTCIRDV*EAALPK Trigger: CTTTGGTAATGCTGCTTCCAATACATCACGAATGCA...CGTGCTGCTTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR CCA 72 bp | TTTGTGGTAAAGGGACTCAGGGAATGGACTGATTCCTaGGTAAGTAAACAGAGAAGGGAAGACAGCCGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: FVVKGLREWTDS*VSKQRREDSRA Trigger: GGCACGGCTGTCTTCCCTTCTCTGTTTACTTACCCAGGAATCAGTCCATTCCCTGAGTCCCTTTACCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR CCA 72 bp | CTGGCAGGAATGGTTCTGGTTTGGCTTTGGAATGTATaGATAAGTGACTACTCTGTGATCCCCAGAGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LAGMVLVWLWNV*ISDYSVIPRGP Trigger: TGGGCCTCTGGGGATCACAGAGTAGTCACTTATCCATACATTCCAAAGCCAAACCAGAACCATTCCTGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR TCA 72 bp | CCTTGGTGTCTCTCAGAATATCCTGGGAAGAAGAACTaGGAGTGCAGCAGAGTTTCCCAGATGTGGAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: PWCLSEYPGKKN*ECSRVSQMWKI Trigger: GATCTTCCACATCTGGGAAACTCTGCTGCACTCTCAGTTCTTCTTCCCAGGATATTCTGAGAGACACCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| 3UTR GCA 72 bp | TTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACTaGGTCGAGGAGTCAGGGCCCAGTGAAGCTGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: FPDVEDLNSENN*VEESGPSEAEH Trigger: ATGTTCAGCTTCACTGGGCCCTGACTCCTCGACGCAGTTATTTTCACTGTTGAGATCTTCCACATCTGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| 3UTR GCA 72 bp | ATCCCCAGAGGCCCAGAAATGGGTACTAGCCAAATCTaGCACTTTGAAACATCCCCAATCCACTGCTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: IPRGPEMGTSQI*HFETSPIHCFD Trigger: ATCAAAGCAGTGGATTGGGGATGTTTCAAAGTGGCAGATTTGGCTAGTACCCATTTCTGGGCCTCTGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGCAGGAAGATTTGCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATAAACCAGCAGACATCTaGCTGGTGAGGGGATGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSRKICLSLHTIHYRKWHKPADI*LVRGCF Trigger: AAAACATCCCCTCACCAGCAAGATGTCTGCTGGTTT...ATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCAAATCTTCCTGCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR-3UTR CAA 90 bp | GCATATGCAGCCACATACCTTAAACTGCTAAGCACAAAAATCATCTTTATTTGGGGAGAACTGGAGACCTaGAGATGGCCCCTGGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: AYAATYLKLLSTKIIFIWGELET*RWPLGE Trigger: CTCACCCAGGGGCCATCTCAAGGTCTCCAGTTCTCC...CCAAATAAAGATGATTTTTGTGCTTAGCAGTTTAAGGTATGTGGCTGCATATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR-3UTR CAA 90 bp | CGTGTGAGCATGTGCTCATGTGAAAGACTGAGACAGAGACAGAGACAGACAGAGTCTAGTTCTGATAGCTaGGAATCAGTTAGAGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: RVSMCSCERLRQRQRQTESSSDS*ESVRGT Trigger: AGTCCCTCTAACTGATTCCAAGCTATCAGAACTAGA...CTCTGTCTGTCTCTGTCTCTGTCTCAGTCTTTCACATGAGCACATGCTCACACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR TCA 72 bp | AATGGTTCTGGTTTGGCTTTGGAATGTATGGATAAGTaGCTACTCTGTGATCCCCAGAGGCCCAGAAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: NGSGLALECMDK*LLCDPQRPRNG Trigger: CCCATTTCTGGGCCTCTGGGGATCACAGAGTAGTCACTTATCCATACATTCCAAAGCCAAACCAGAACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR CCA 72 bp | GGGAAGGAGCGATGCTCACTGTCTTGTTCTATGGAGTaGGAAATGCTTACTAGTGTTTCTCTCCTACGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GKERCSLSCSME*EMLTSVSLLRL Trigger: AAGACGTAGGAGAGAAACACTAGTAAGCATTTCCCACTCCATAGAACAAGACAGTGAGCATCGCTCCTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR CCA 72 bp | GTTGAAAGAGAAGCCTTGGTGTCTCTCAGAATATCCTaGGAAGAAGAACTGAGAGTGCAGCAGAGTTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VEREALVSLRIS*EEELRVQQSFP Trigger: TGGGAAACTCTGCTGCACTCTCAGTTCTTCTTCCCAGGATATTCTGAGAGACACCAAGGCTTCTCTTTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| 3UTR-3UTR CAA 90 bp | GATGTTCAAGGAACACAAACAAGTAAACGTGGGAAGGAGCGATGCTCACTGTCTCATCAAGAGACCAAGTaGCTTAAACCAGCAGACATC | + |
|
Preference number: 3 (lower is better) Translates to: DVQGTQTSKRGKERCSLSHQETK*LKPADI Trigger: GATGTCTGCTGGTTTAAGCAACTTGGTCTCTTGATG...AGACAGTGAGCATCGCTCCTTCCCACGTTTACTTGTTTGTGTTCCTTGAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR TCA 72 bp | AGACCAAGTTGCTTAAACCAGCAGACATCTTGCTGGTaGGGGGATGTTTTTGCCAACAATTCTGTGACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RPSCLNQQTSCW*GDVFANNSVTH Trigger: GTGAGTCACAGAATTGTTGGCAAAAACATCCCCTCACCAGCAAGATGTCTGCTGGTTTAAGCAACTTGGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR TCA 72 bp | GTCTCACTAGAGAACCAAAAAGAGGATGCAAAGCCATaGGGAGCTCTCTCTTTCTCGATAGGGAAGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSLENQKEDAKP*GALSFSIGKQK Trigger: TTTCTGCTTCCCTATCGAGAAAGAGAGAGCTCCTCATGGCTTTGCATCCTCTTTTTGGTTCTCTAGTGAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR TCA 72 bp | GAGAGAAGTGAAACTAACACATGCTCTGCACCTTGCTaGTGTGTTTATTATCGACCCAACCTCTCCAACGTG | + |
|
Preference number: 3 (lower is better) Translates to: ERSETNTCSAPC*CVYYRPNLSNV Trigger: CACGTTGGAGAGGTTGGGTCGATAATAAACACATCAGCAAGGTGCAGAGCATGTGTTAGTTTCACTTCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR GCA 72 bp | CAAGGAACACAAACAAGTAAACGTGGGAAGGAGCGATaGTCACTGTCTTGTTCTATGGAGTGGGAAATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QGTQTSKRGKER*SLSCSMEWEML Trigger: AAGCATTTCCCACTCCATAGAACAAGACAGTGAGCATCGCTCCTTCCCACGTTTACTTGTTTGTGTTCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR GCA 72 bp | AAGCAGAAAGTCCTACCACGTGGTAGTTCCTGTGATTaGCCTGAAGTAGAGCTCTGTGACTTTACCTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KQKVLPRGSSCD*PEVELCDFTLK Trigger: CTTTAAGGTAAAGTCACAGAGCTCTACTTCAGGGCAATCACAGGAACTACCACGTGGTAGGACTTTCTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR TCA 72 bp | GTGGCCATAAATATTGAATGCAAAGTGTCTCCCCAGTaGAGATTCCTGTGTTGTTGTGATGACCTACACCAC | + |
|
Preference number: 3 (lower is better) Translates to: VAINIECKVSPQ*RFLCCCDDLHH Trigger: GTGGTGTAGGTCATCACAACAACACAGGAATCTTCACTGGGGAGACACTTTGCATTCAATATTTATGGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| 3UTR GCA 72 bp | AGCGATGCTCACTGTCTTGTTCTATGGAGTGGGAAATaGTTACTAGTGTTTCTCTCCTACGTCTTTGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SDAHCLVLWSGK*LLVFLSYVFVV Trigger: TACCACAAAGACGTAGGAGAGAAACACTAGTAAGCATTTCCCACTCCATAGAACAAGACAGTGAGCATCGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR-3UTR CAA 90 bp | CAACAACGGTTCCATTTAACCTTGGGAGTTAGCATCTTTTTGAGATGTGTGAGCGTTGAAAGAGAAGCCTaGGTGTCTCTCAGAATATCC | + |
|
Preference number: 3 (lower is better) Translates to: QQRFHLTLGVSIFLRCVSVEREA*VSLRIS Trigger: GGATATTCTGAGAGACACCAAGGCTTCTCTTTCAAC...GCTCACACATCTCAAAAAGATGCTAACTCCCAAGGTTAAATGGAACCGTTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| 3UTR GCA 72 bp | CCACAGAAAGAGGTGTATTTTACAAAGGAGGTGATTTaGATGAACAAGCAGAAAGTCCTACCACGTGGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: PQKEVYFTKEVI*MNKQKVLPRGS Trigger: ACTACCACGTGGTAGGACTTTCTGCTTGTTCATGCAAATCACCTCCTTTGTAAAATACACCTCTTTCTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR TCA 72 bp | ATCTTTTTGAGATGTGTGAGCAGTGGCCATAAATATTaGATGCAAAGTGTCTCCCCAGTGAAGATTCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: IFLRCVSSGHKY*MQSVSPVKIPV Trigger: CACAGGAATCTTCACTGGGGAGACACTTTGCATTCAATATTTATGGCCACTGCTCACACATCTCAAAAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| 3UTR TCA 72 bp | TATGTTTGCAACTGTGGGCTCACCATCAGAAATCGGTaGATGTTATGTAATGTCTTCTCTGTCAGGATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: YVCNCGLTIRNR*MLCNVFSVRIP Trigger: AGGAATCCTGACAGAGAAGACATTACATAACATTCACCGATTTCTGATGGTGAGCCCACAGTTGCAAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAATGACTGGAGTGGAAAAGGGGTTTGCATATGCAGCCACATACCTTAAACTGGGACAATTAATACTTTaGCTAATGGCATCAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VMTGVEKGFAYAATYLKLGQLIL*LMASRD Trigger: GTCTCTTGATGCCATTAGCAAAAGTATTAATTGTCC...CAGTTTAAGGTATGTGGCTGCATATGCAAACCCCTTTTCCACTCCAGTCATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR TCA 72 bp | TATAAAATGATGGTCATAATGGCCACAGTGAGAGGCTaGGTTAGGACATATCAATGGTATCCATGGATACTG | + |
|
Preference number: 3 (lower is better) Translates to: YKMMVIMATVRG*VRTYQWYPWIL Trigger: CAGTATCCATGGATACCATTGATATGTCCTAACTCAGCCTCTCACTGTGGCCATTATGACCATCATTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR CCA 72 bp | ACCTACACCACAAGATCAAGTATGCTAGAGAAAAAGTaGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TYTTRSSMLEKK*LSYAMLKEKPW Trigger: CCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTTTTCTCTAGCATACTTGATCTTGTGGTGTAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGACAGCTAGACCAAGAAATCATTCTAGTTCTGATAGCTTGGAATCAGTTAGACTGTCTTATACTCATTaGACATTCCACAGAAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ETARPRNHSSSDSLESVRLSYTH*TFHRKR Trigger: CCTCTTTCTGTGGAATGTCAAATGAGTATAAGACAG...TCTAACTGATTCCAAGCTATCAGAACTAGAATGATTTCTTGGTCTAGCTGTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR GCA 72 bp | AAGATCAAGTATGCTAGAGAAAAAGTGGTTATCTTATaGCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KIKYAREKVVIL*HVEREALVSLR Trigger: TCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTTTTCTCTAGCATACTTGATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| 3UTR-3UTR CAA 90 bp | AACACTGTCAGTAATAGACAGACATATAAAATGATGGTCATAATGGCCACAGTGATTTGTGAACATAGATaGGTGTGTTGCCACCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: NTVSNRQTYKMMVIMATVICEHR*VCCHLH Trigger: ATGAAGGTGGCAACACACCAATCTATGTTCACAAAT...CACTGTGGCCATTATGACCATCATTTTATATGTCTGTCTATTACTGACAGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR GCA 72 bp | TCTGTCGTGTCTGTAGTCCCACTTGGTAATCTTGCATaGATAATACTAACTACAGAAGTTTTAATATCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SVVSVVPLGNLA*IILTTEVLISN Trigger: ATTTGATATTAAAACTTCTGTAGTTAGTATTATGCATGCAAGATTACCAAGTGGGACTACAGACACGACAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR CAA 72 bp | GAGGAGCACACGGGTCAACCCAGGGCACGTGTGGGCTaGGTGACTCATCCACTGCGGCCTGCATTCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: EEHTGQPRARVG*VTHPLRPAFVM Trigger: CATCACGAATGCAGGCCGCAGTGGATGAGTCACCAAGCCCACACGTGCCCTGGGTTGACCCGTGTGCTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR GCA 90 bp | CTGCCATGTGGTTCACAGGCATGTTACCAGGAACCACAGCCTCCTGAGAACTGTGGCCTCTGCCAGCAGTaGTTCCGCCTGAGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPCGSQACYQEPQPPENCGLCQQ*FRLRVA Trigger: GGCTACCCTCAGGCGGAAGCACTGCTGGCAGAGGCC...ACAGTTCTCAGGAGGCTGTGGTTCCTGGTAACATGCCTGTGAACCACATGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR GCA 90 bp | CCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTATGGAGCTGTAGGAGGCCTCTGCCAGCAGTaGTTCCGCCTGAGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGLMALGLQCLSSYGAVGGLCQQ*FRLRVA Trigger: GGCTACCCTCAGGCGGAAGCACTGCTGGCAGAGGCC...TCCTACAGCTCCATAAGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGGAAGCAGCACGGGGAGAGACCCCCGTTaGGCTGAGTACTGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLSLHTIHYRKWHIGSSTGRDPR*AEYCLQ Trigger: CTGGAGACAGTACTCAGCCCAACGGGGGTCTCTCCC...CGTGCTGCTTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR GCA 90 bp | TGCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGGAAGCAGCACGAGTCTGACAGTGACCTaGTGCAGGATCTGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLSLHTIHYRKWHIGSSTSLTVT*CRICTA Trigger: GGCAGTGCAGATCCTGCAGCAGGTCACTGTCAGACT...CGTGCTGCTTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR GCA 90 bp | CTCATCTGCCAAGTGCTTAACAGCAGGGAGGGAAGAAAACTGGCCATGTCTCAGCTGGAGGTTTGGGTGTaGCTGTGTGGGAGAGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LICQVLNSREGRKLAMSQLEVWV*LCGRDP Trigger: GGGGTCTCTCCCACACAGGCACACCCAAACCTCCAG...CTGAGACATGGCCAGTTTTCTTCCCTCCCTGCTGTTAAGCACTTGGCAGATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR TCA 90 bp | GGCTGCAGCTGTGATCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTCACTTCCATGTCCAATaGGTCCTTGACCTCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCSCDPGLMALGLQCLSSHFHVQ*VLDLRE Trigger: CTCTCGGAGGTCAAGGACTCATTGGACATGGAAGTG...AGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGATCACAGCTGCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACTGCGTCGAGGGGCCTCTGCCAGCAGTaGTTCCGCCTGAGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRVSQMWKISTVKITASRGLCQQ*FRLRVA Trigger: GGCTACCCTCAGGCGGAAGCACTGCTGGCAGAGGCC...CCTCGACGCAGTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCCCGGCTCACCTATGCAGAAAGCACATAGATCAGATGATGGGGCCTTTCTGAGCCTGAACAAGTaGGGAGAGCTGGCTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQPGSPMQKAHRSDDGAFLSLNK*GELAHL Trigger: CAGGTGAGCCAGCTCTCCGCACTTGTTCAGGCTCAG...AAAGGCCCCATCATCTGATCTATGTGCTTTCTGCATAGGTGAGCCGGGCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR GCA 90 bp | AGACAGCCGTGCCCCCTTCCTGTACCCTTCAGAAACGGGCTACGTATATACACACTGCAGGATCTGCACTaGCTGCTTGTGGTACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQPCPLPVPFRNGLRIYTLQDLH*LLVVLQ Trigger: CTGGAGTACCACAAGCAGGCAGTGCAGATCCTGCAG...TGTGTATATACGTAGCCCGTTTCTGAAGGGTACAGGAAGGGGGCACGGCTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CCA 90 bp | GCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGGAAGCAGCACGCCCCTGGAAGCTGGATTaGGTTGGAGGTATTCAATCG | + |
|
Preference number: 4 (lower is better) Translates to: AFHSTRSTTASGISEAARPWKLD*VGGIQS Trigger: CGATTGAATACCTCCAACCCAATCCAGCTTCCAGGG...GCGTGCTGCTTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR GCA 90 bp | AAGGACATAGGACCTCTAGAAAGGATCCAATTAATGAGGCATCGAGAACCAACCGGCCTCTGCCAGCAGTaGTTCCGCCTGAGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KDIGPLERIQLMRHREPTGLCQQ*FRLRVA Trigger: GGCTACCCTCAGGCGGAAGCACTGCTGGCAGAGGCC...GGTTGGTTCTCGATGCCTCATTAATTGGATCCTTTCTAGAGGTCCTATGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCCCTTCCTGTACCCTTCAGAAACGGGCTACGTATATACACAGCTTCTGTACTGAGCCTGAACAAGTaGGGAGAGCTGGCTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPLPVPFRNGLRIYTASVLSLNK*GELAHL Trigger: CAGGTGAGCCAGCTCTCCGCACTTGTTCAGGCTCAG...TACAGAAGCTGTGTATATACGTAGCCCGTTTCTGAAGGGTACAGGAAGGGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR GCA 90 bp | TGCAAGCTTCAGCCCGGCTCACCTATGCAGAAAGCACATAGATCAGATGATGGGCTGCAGGATCTGCACTaGCTGCTTGTGGTACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CKLQPGSPMQKAHRSDDGLQDLH*LLVVLQ Trigger: CTGGAGTACCACAAGCAGGCAGTGCAGATCCTGCAG...CCCATCATCTGATCTATGTGCTTTCTGCATAGGTGAGCCGGGCTGAAGCTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CCA 90 bp | TGTGATCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTATGGAGCTCCTGGCCCCTTCTCTTaGCCGCGGATTTTCGACATG | + |
|
Preference number: 4 (lower is better) Translates to: CDPGLMALGLQCLSSYGAPGPFS*PRIFDM Trigger: CATGTCGAAAATCCGCGGCCAAGAGAAGGGGCCAGG...AGCTCCATAAGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGATCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACTGCGTCGAGGAGTTGGGTGTGCCTGTGTaGGAGAGACCCCCGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSFPDVEDLNSENNCVEELGVPV*ERPPLG Trigger: GCCCAACGGGGGTCTCTCCCACACAGGCACACCCAA...CTCCTCGACGCAGTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR TCA 90 bp | GGCTGCAGCTGTGATCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTTCTCACTCACTTTCTaGGTGGCTTTGTGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCSCDPGLMALGLQCLSSFSLTF*VALWNC Trigger: GCAGTTCCACAAAGCCACTCAGAAAGTGAGTGAGAA...AGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGATCACAGCTGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCCCTTCCTGTACCCTTCAGAAACGGGCTACGTATATACACAGCTTCTGTAAAGCCAGACTGGCCATaGAGCATCCCCTCATACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPLPVPFRNGLRIYTASVKPDWP*SIPSYQ Trigger: CTGGTATGAGGGGATGCTTCATGGCCAGTCTGGCTT...TACAGAAGCTGTGTATATACGTAGCCCGTTTCTGAAGGGTACAGGAAGGGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR TCA 90 bp | TCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTATGGAGCTGTAGGAGGATCGCACAGACCTaGATCTCCCTCAGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWIDGPWSPVPFILWSCRRIAQT*ISLRSL Trigger: CAAGGATCTGAGGGAGATTCAGGTCTGTGCGATCCT...CCTACAGCTCCATAAGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGATTTGCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGGAAACCTGCTGCAGGATCTaGACTGCCTGCTTGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GRFAFHSTRSTTASGISETCCRI*TACLWY Trigger: GTACCACAAGCAGGCAGTGCAGATCCTGCAGCAGGT...TTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCAAATCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CCA 90 bp | TGGGGCCTTTTTAGCCTATGTTATATGCCTTTCCACCACCTGGCATCTCACATTGGGAGAGACCCCCGTTaGGCTGAGTACTGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WGLFSLCYMPFHHLASHIGRDPR*AEYCLQ Trigger: CTGGAGACAGTACTCAGCCCAACGGGGGTCTCTCCC...AATGTGAGATGCCAGGTGGTGGAAAGGCATATAACATAGGCTAAAAAGGCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CCA 90 bp | ATATCTTCAGTGAGGAGAGTTTTTCTGCCATGTGGTTCACAGGCATGTTACCAGTTGGGTGTGCCTGTGTaGGAGAGACCCCCGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISSVRRVFLPCGSQACYQLGVPV*ERPPLG Trigger: GCCCAACGGGGGTCTCTCCCACACAGGCACACCCAA...CTGGTAACATGCCTGTGAACCACATGGCAGAAAAACTCTCCTCACTGAAGATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR GCA 90 bp | CTGAGAGTGCAGCAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACCTGGAGGTTTGGGTGTaGCTGTGTGGGAGAGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRVQQSFPDVEDLNSENNLEVWV*LCGRDP Trigger: GGGGTCTCTCCCACACAGGCACACCCAAACCTCCAG...GTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTGCTGCACTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CCA 90 bp | CAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACTGCGTCGAGGAGGGACACCTGGAGGTTTaGGTGTGCCTGTGTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSFPDVEDLNSENNCVEEGHLEV*VCLCGR Trigger: TCTCCCACACAGGCACACCCAAACCTCCAGGTGTCC...CTCCTCGACGCAGTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CCA 90 bp | AGCTGTGATCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTATGGACCCAGGGAGACTGTCTaGGAAATGAGAATCTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCDPGLMALGLQCLSSYGPRETV*EMRICV Trigger: CACGCAGATTCTCATTTCCCAGACAGTCTCCCTGGG...TCCATAAGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGATCACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGTTTATACATTAAGCAGGAAGATTTGCCTTTCACTCCACACGATCCACTAGCTCCCTGCCGAACTTaGGCATGGCCTCTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSLYIKQEDLPFTPHDPLAPCRT*AWPLPA Trigger: TGCTGGCAGAGGCCATGCTCAAGTTCGGCAGGGAGC...TAGTGGATCGTGTGGAGTGAAAGGCAAATCTTCCTGCTTAATGTATAAACTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACTGCGTCGAGGCCATCTCCAAGAGGTTaGACATGCTCGACTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SRVSQMWKISTVKITASRPSPRG*TCSTRR Trigger: TCGCCGAGTCGAGCATGTTCAACCTCTTGGAGATGG...CCTCGACGCAGTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR TCA 90 bp | TGCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGGAAGCAGCACGCCTTCTTGGCTGAGATaGAGCTTGTCTTATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLSLHTIHYRKWHIGSSTPSWLR*SLSYSF Trigger: GAAAGAATAAGACAAGCTTCATCTCAGCCAAGAAGG...CGTGCTGCTTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR TCA 90 bp | AAAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAATATGCCCCACGTCCTCCTaGGGTCCATTCCACGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVVILCHVEREALVSLRICPTSS*GPFHAP Trigger: AGGCGCGTGGAATGGACCTCAGGAGGACGTGGGGCA...TATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR GCA 90 bp | GCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGGAAGCAGCACGCCTTCATCTGGAATCTTaGCTTGTCGCTTCTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AFHSTRSTTASGISEAARLHLES*LVASSY Trigger: ATAAGAAGAAGCGACAAGGCAAGATTCCAGATGAAG...GCGTGCTGCTTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR GCA 90 bp | AAGGACATAGGACCTCTAGAAAGGATCCAATTAATGAGGCATCGAGAACCAACCCTGAGCCTGAACAAGTaGGGAGAGCTGGCTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KDIGPLERIQLMRHREPTLSLNK*GELAHL Trigger: CAGGTGAGCCAGCTCTCCGCACTTGTTCAGGCTCAG...GGTTGGTTCTCGATGCCTCATTAATTGGATCCTTTCTAGAGGTCCTATGTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACTGCGTCGAGGACCTGCTGCAGGATCTaGACTGCCTGCTTGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SRVSQMWKISTVKITASRTCCRI*TACLWY Trigger: GTACCACAAGCAGGCAGTGCAGATCCTGCAGCAGGT...CCTCGACGCAGTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGACCACGCGCCTGCCCATaGGAGAAGCAGCTTCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: EKVVILCHVEREALVSLRPRACP*EKQLLR Trigger: GCGAAGAAGCTGCTTCTCGCATGGGCAGGCGCGTGG...TCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CCA 90 bp | TGCAGCTGTGATCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTATCCCTGGAAGCTGGATTaGGTTGGAGGTATTCAATCG | + |
|
Preference number: 4 (lower is better) Translates to: CSCDPGLMALGLQCLSSYPWKLD*VGGIQS Trigger: CGATTGAATACCTCCAACCCAATCCAGCTTCCAGGG...ATAAGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGATCACAGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGAAGAAGAACTGAGAGTGCAGCAGAGTTTCCCAGATGTGGAAGATCTCCCCTGGAAGCTGGATTaGGTTGGAGGTATTCAATCG | + |
|
Preference number: 4 (lower is better) Translates to: SWEEELRVQQSFPDVEDLPWKLD*VGGIQS Trigger: CGATTGAATACCTCCAACCCAATCCAGCTTCCAGGG...GAGATCTTCCACATCTGGGAAACTCTGCTGCACTCTCAGTTCTTCTTCCCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CCA 90 bp | CGTGTGAGCATGTGCTCATGTGAAAGACTGAGACAGAGACAGAGACAGACAGAGCCCTGGAAGCTGGATTaGGTTGGAGGTATTCAATCG | + |
|
Preference number: 4 (lower is better) Translates to: RVSMCSCERLRQRQRQTEPWKLD*VGGIQS Trigger: CGATTGAATACCTCCAACCCAATCCAGCTTCCAGGG...CTCTGTCTGTCTCTGTCTCTGTCTCAGTCTTTCACATGAGCACATGCTCACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CCA 90 bp | GTAATGACTGGAGTGGAAAAGGGGTTTGCATATGCAGCCACATACCTTAAACTGCCTGGCCCCTTCTCTTaGCCGCGGATTTTCGACATG | + |
|
Preference number: 4 (lower is better) Translates to: VMTGVEKGFAYAATYLKLPGPFS*PRIFDM Trigger: CATGTCGAAAATCCGCGGCCAAGAGAAGGGGCCAGG...CAGTTTAAGGTATGTGGCTGCATATGCAAACCCCTTTTCCACTCCAGTCATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CCA 90 bp | CTCATCTGCCAAGTGCTTAACAGCAGGGAGGGAAGAAAACTGGCCATGTCTCAGGCGGAGTTCTTCATCTaGAATCTTGCCTTGTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LICQVLNSREGRKLAMSQAEFFI*NLALSL Trigger: AAGCGACAAGGCAAGATTCCAGATGAAGAACTCCGC...CTGAGACATGGCCAGTTTTCTTCCCTCCCTGCTGTTAAGCACTTGGCAGATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR TCA 90 bp | CGTGTGAGCATGTGCTCATGTGAAAGACTGAGACAGAGACAGAGACAGACAGAGTTCTCACTCACTTTCTaGGTGGCTTTGTGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVSMCSCERLRQRQRQTEFSLTF*VALWNC Trigger: GCAGTTCCACAAAGCCACTCAGAAAGTGAGTGAGAA...CTCTGTCTGTCTCTGTCTCTGTCTCAGTCTTTCACATGAGCACATGCTCACACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGCCAACATACAGATTGCTCACCATCTCACTCAGAAATAAATGGGACCCCCCACTTCCATGTCCAATaGGTCCTTGACCTCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSQHTDCSPSHSEINGTPHFHVQ*VLDLRE Trigger: CTCTCGGAGGTCAAGGACTCATTGGACATGGAAGTG...GGGGGTCCCATTTATTTCTGAGTGAGATGGTGAGCAATCTGTATGTTGGCTGAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR TCA 90 bp | GTAATGACTGGAGTGGAAAAGGGGTTTGCATATGCAGCCACATACCTTAAACTGCCATCTCCAAGAGGTTaGACATGCTCGACTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VMTGVEKGFAYAATYLKLPSPRG*TCSTRR Trigger: TCGCCGAGTCGAGCATGTTCAACCTCTTGGAGATGG...CAGTTTAAGGTATGTGGCTGCATATGCAAACCCCTTTTCCACTCCAGTCATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR TCA 90 bp | GTGAGTTTATACATTAAGCAGGAAGATTTGCCTTTCACTCCACACGATCCACTAAGACCCCCGTTGGGCTaGGTACTGTCTCCAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSLYIKQEDLPFTPHDPLRPPLG*VLSPVA Trigger: TGCCACTGGAGACAGTACTCAGCCCAACGGGGGTCT...TAGTGGATCGTGTGGAGTGAAAGGCAAATCTTCCTGCTTAATGTATAAACTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR GCA 90 bp | GATGTTCAAGGAACACAAACAAGTAAACGTGGGAAGGAGCGATGCTCACTGTCTGAGCAGGACCAAAGTTaGAATCATCACCCAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DVQGTQTSKRGKERCSLSEQDQS*NHHPAP Trigger: GGGAGCTGGGTGATGATTGCAACTTTGGTCCTGCTC...AGACAGTGAGCATCGCTCCTTCCCACGTTTACTTGTTTGTGTTCCTTGAACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CCA 90 bp | TGTTCTATGGAGTGGGAAATGCTTACTAGTGTTTCTCTCCTACGTCTTTGTGGTGGACACCTGGAGGTTTaGGTGTGCCTGTGTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSMEWEMLTSVSLLRLCGGHLEV*VCLCGR Trigger: TCTCCCACACAGGCACACCCAAACCTCCAGGTGTCC...ACCACAAAGACGTAGGAGAGAAACACTAGTAAGCATTTCCCACTCCATAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CCA 90 bp | TGCAAGCTTCAGCCCGGCTCACCTATGCAGAAAGCACATAGATCAGATGATGGGAAGTGGGGAGTCTCTTaGGAAACTGCCACAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CKLQPGSPMQKAHRSDDGKWGVS*ETATMF Trigger: AAACATTGTGGCAGTTTCCCAAGAGACTCCCCACTT...CCCATCATCTGATCTATGTGCTTTCTGCATAGGTGAGCCGGGCTGAAGCTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR TCA 90 bp | CTGGGAAGAAGAACTGAGAGTGCAGCAGAGTTTCCCAGATGTGGAAGATCTCAATTCTCACTCACTTTCTaGGTGGCTTTGTGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGRRTESAAEFPRCGRSQFSLTF*VALWNC Trigger: GCAGTTCCACAAAGCCACTCAGAAAGTGAGTGAGAA...TTGAGATCTTCCACATCTGGGAAACTCTGCTGCACTCTCAGTTCTTCTTCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR TCA 90 bp | AGACAGCCGTGCCCCCTTCCTGTACCCTTCAGAAACGGGCTACGTATATACACATATTCCCTTCTTGGCTaGGATGAAGCTTGTCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: RQPCPLPVPFRNGLRIYTYSLLG*DEACLI Trigger: AATAAGACAAGCTTCATCTCAGCCAAGAAGGGAATA...TGTGTATATACGTAGCCCGTTTCTGAAGGGTACAGGAAGGGGGCACGGCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR TCA 90 bp | AAAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAATAAGACCCCCGTTGGGCTaGGTACTGTCTCCAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVVILCHVEREALVSLRIRPPLG*VLSPVA Trigger: TGCCACTGGAGACAGTACTCAGCCCAACGGGGGTCT...TATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR GCA 90 bp | CCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTATGGAGCTGTAGGAGGGTCGATGAAATTCTaGTTCACTTCCATGTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGLMALGLQCLSSYGAVGGSMKF*FTSMSN Trigger: ATTGGACATGGAAGTGAAGCAGAATTTCATCGACCC...TCCTACAGCTCCATAAGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGAAGAAGAACTGAGAGTGCAGCAGAGTTTCCCAGATGTGGAAGATCTCAACAAGAGGACATGGGTTaGCAAGCAAAACACTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGRRTESAAEFPRCGRSQQEDMG*QAKHSS Trigger: ACTGGAGTGTTTTGCTTGGCAACCCATGTCCTCTTG...TTGAGATCTTCCACATCTGGGAAACTCTGCTGCACTCTCAGTTCTTCTTCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR GCA 90 bp | TGCAGCTGTGATCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTATTGGGAAATGAGAATCTaGGTGTGTGTGAGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSCDPGLMALGLQCLSSYWEMRI*VCVRRR Trigger: CCTTCTTCTCACACACACGCAGATTCTCATTTCCCA...ATAAGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGATCACAGCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR CCA 90 bp | GATCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTATGGAGCTGTACACTCACTTTCTGAGTaGCTTTGTGGAACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DPGLMALGLQCLSSYGAVHSLSE*LCGTAS Trigger: AGAAGCAGTTCCACAAAGCCACTCAGAAAGTGAGTG...TACAGCTCCATAAGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCATGTGGTTCACAGGCATGTTACCAGGAACCACAGCCTCCTGAGAACTGTGAAGCTGGATTGGGTTaGAGGTATTCAATCGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPCGSQACYQEPQPPENCEAGLG*RYSIVF Trigger: AAAAACGATTGAATACCTCCAACCCAATCCAGCTTC...ACAGTTCTCAGGAGGCTGTGGTTCCTGGTAACATGCCTGTGAACCACATGGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CCA 90 bp | AATACCCTGCAACAACGGTTCCATTTAACCTTGGGAGTTAGCATCTTTTTGAGACCTGGCCCCTTCTCTTaGCCGCGGATTTTCGACATG | + |
|
Preference number: 4 (lower is better) Translates to: NTLQQRFHLTLGVSIFLRPGPFS*PRIFDM Trigger: CATGTCGAAAATCCGCGGCCAAGAGAAGGGGCCAGG...TCTCAAAAAGATGCTAACTCCCAAGGTTAAATGGAACCGTTGTTGCAGGGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CCA 90 bp | CGTGTGAGCATGTGCTCATGTGAAAGACTGAGACAGAGACAGAGACAGACAGAGAATTTCTCCAGAGCTTaGCGGAGTTCTTCATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVSMCSCERLRQRQRQTENFSRA*RSSSSG Trigger: TCCAGATGAAGAACTCCGCCAAGCTCTGGAGAAATT...CTCTGTCTGTCTCTGTCTCTGTCTCAGTCTTTCACATGAGCACATGCTCACACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGTGCAGCAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACGAAGCATCTGCCCAGTaGCTTCAGCTCTTTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRVQQSFPDVEDLNSENNEASAQ*LQLFPR Trigger: TCTTGGAAAGAGCTGAAGTCACTGGGCAGATGCTTC...GTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTGCTGCACTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR GCA 90 bp | CGTGTGAGCATGTGCTCATGTGAAAGACTGAGACAGAGACAGAGACAGACAGAGGGGTCGATGAAATTCTaGTTCACTTCCATGTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RVSMCSCERLRQRQRQTEGSMKF*FTSMSN Trigger: ATTGGACATGGAAGTGAAGCAGAATTTCATCGACCC...CTCTGTCTGTCTCTGTCTCTGTCTCAGTCTTTCACATGAGCACATGCTCACACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR GCA 90 bp | AGGACATATCAATGGTATCCATGGATACTGCATCTCGTAGCAAGGCTTAAATCAACCTGCTGCAGGATCTaGACTGCCTGCTTGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RTYQWYPWILHLVARLKSTCCRI*TACLWY Trigger: GTACCACAAGCAGGCAGTGCAGATCCTGCAGCAGGT...TGATTTAAGCCTTGCTACGAGATGCAGTATCCATGGATACCATTGATATGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR GCA 90 bp | AATACCCTGCAACAACGGTTCCATTTAACCTTGGGAGTTAGCATCTTTTTGAGAAGTCTGACAGTGACCTaGTGCAGGATCTGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NTLQQRFHLTLGVSIFLRSLTVT*CRICTA Trigger: GGCAGTGCAGATCCTGCAGCAGGTCACTGTCAGACT...TCTCAAAAAGATGCTAACTCCCAAGGTTAAATGGAACCGTTGTTGCAGGGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR GCA 90 bp | AGGACATATCAATGGTATCCATGGATACTGCATCTCGTAGCAAGGCTTAAATCAAGTCTGACAGTGACCTaGTGCAGGATCTGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTYQWYPWILHLVARLKSSLTVT*CRICTA Trigger: GGCAGTGCAGATCCTGCAGCAGGTCACTGTCAGACT...TGATTTAAGCCTTGCTACGAGATGCAGTATCCATGGATACCATTGATATGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCTTCTGTACAGCAAGGAATCTGAGCTTAGAGACCAGATTTCTTCCCAATACAAGTGCGGAGAGCTaGCTCACCTGTTCTATATCC | + |
|
Preference number: 4 (lower is better) Translates to: HSFCTARNLSLETRFLPNTSAES*LTCSIS Trigger: GGATATAGAACAGGTGAGCCAGCTCTCCGCACTTGT...ATTGGGAAGAAATCTGGTCTCTAAGCTCAGATTCCTTGCTGTACAGAAGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CCA 90 bp | CACAGCTTCTGTACAGCAAGGAATCTGAGCTTAGAGACCAGATTTCTTCCCAATGGCTCATCCGTGGTTTaGGCTGATATTCCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSFCTARNLSLETRFLPNGSSVV*ADIPFL Trigger: CAAGAAGGGAATATCAGCCCAAACCACGGATGAGCC...ATTGGGAAGAAATCTGGTCTCTAAGCTCAGATTCCTTGCTGTACAGAAGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CCA 90 bp | CTGAGAGTGCAGCAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACGAGTACTGTCTCCAGTaGCAAACTCTAGGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LRVQQSFPDVEDLNSENNEYCLQ*QTLGSS Trigger: GGATGAGCCTAGAGTTTGCCACTGGAGACAGTACTC...GTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTGCTGCACTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| 3UTR CAA 72 bp | CTTCCCGTGGTGAGTTTATACATTAAGCAGGAAGATTaGCCTTTCACTCCACACGATCCACTACCGCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPVVSLYIKQED*PFTPHDPLPQV Trigger: CACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCAAATCTTCCTGCTTAATGTATAAACTCACCACGGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| 3UTR CAA 72 bp | ATGAGGCATCGAGAACCAACCTCATATTCTGCCCTGTaGCGCAGAAATAAGCTTTTCCTAACTCAACCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MRHREPTSYSAL*RRNKLFLTQPR Trigger: CCTCGGTTGAGTTAGGAAAAGCTTATTTCTGCGCAACAGGGCAGAATATGAGGTTGGTTCTCGATGCCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR TCA 90 bp | ATATCTTCAGTGAGGAGAGTTTTTCTGCCATGTGGTTCACAGGCATGTTACCAGTTCTCACTCACTTTCTaGGTGGCTTTGTGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISSVRRVFLPCGSQACYQFSLTF*VALWNC Trigger: GCAGTTCCACAAAGCCACTCAGAAAGTGAGTGAGAA...CTGGTAACATGCCTGTGAACCACATGGCAGAAAAACTCTCCTCACTGAAGATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR TCA 90 bp | AAAGCACATAGATCAGATGATGGGGCCTTTTTAGCCTATGTTATATGCCTTTCCCACTTCCATGTCCAATaGGTCCTTGACCTCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAHRSDDGAFLAYVICLSHFHVQ*VLDLRE Trigger: CTCTCGGAGGTCAAGGACTCATTGGACATGGAAGTG...GGAAAGGCATATAACATAGGCTAAAAAGGCCCCATCATCTGATCTATGTGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR TCA 90 bp | TTTTCTGTCGTGTCTGTAGTCCCACTTGGTAATCTTGCATGCATAATACTAACTCCATCTCCAAGAGGTTaGACATGCTCGACTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FSVVSVVPLGNLACIILTPSPRG*TCSTRR Trigger: TCGCCGAGTCGAGCATGTTCAACCTCTTGGAGATGG...AGTTAGTATTATGCATGCAAGATTACCAAGTGGGACTACAGACACGACAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCCTTTTTAGCCTATGTTATATGCCTTTCCACCACCTGGCATCTCACATTGCCTTCTTGGCTGAGATaGAGCTTGTCTTATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GAFLAYVICLSTTWHLTLPSWLR*SLSYSF Trigger: GAAAGAATAAGACAAGCTTCATCTCAGCCAAGAAGG...CAATGTGAGATGCCAGGTGGTGGAAAGGCATATAACATAGGCTAAAAAGGCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR GCA 90 bp | TTTTCTGTCGTGTCTGTAGTCCCACTTGGTAATCTTGCATGCATAATACTAACTCTGCAGGATCTGCACTaGCTGCTTGTGGTACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSVVSVVPLGNLACIILTLQDLH*LLVVLQ Trigger: CTGGAGTACCACAAGCAGGCAGTGCAGATCCTGCAG...AGTTAGTATTATGCATGCAAGATTACCAAGTGGGACTACAGACACGACAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTATGGAGTGGGAAATGCTTACTAGTGTTTCTCTCCTACGTCTTTGTGGTAGAGTACTGTCTCCAGTaGCAAACTCTAGGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VLWSGKCLLVFLSYVFVVEYCLQ*QTLGSS Trigger: GGATGAGCCTAGAGTTTGCCACTGGAGACAGTACTC...TACCACAAAGACGTAGGAGAGAAACACTAGTAAGCATTTCCCACTCCATAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR TCA 90 bp | AAAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAATAGCACAAATCCATGCCTaGAGTCTGAAGCATCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVVILCHVEREALVSLRIAQIHA*SLKHLP Trigger: GGGCAGATGCTTCAGACTTCAGGCATGGATTTGTGC...TATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR GCA 90 bp | TTCAGCCAACATACAGATTGCTCACCATCTCACTCAGAAATAAATGGGACCCCCGGGTCGATGAAATTCTaGTTCACTTCCATGTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSQHTDCSPSHSEINGTPGSMKF*FTSMSN Trigger: ATTGGACATGGAAGTGAAGCAGAATTTCATCGACCC...GGGGGTCCCATTTATTTCTGAGTGAGATGGTGAGCAATCTGTATGTTGGCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CCA 90 bp | GTTACCTCACTCAGGATGATATTCTCCAGGTCCATCCATAAATTTATTGTTTTTCCTGGCCCCTTCTCTTaGCCGCGGATTTTCGACATG | + |
|
Preference number: 4 (lower is better) Translates to: VTSLRMIFSRSIHKFIVFPGPFS*PRIFDM Trigger: CATGTCGAAAATCCGCGGCCAAGAGAAGGGGCCAGG...AAAAACAATAAATTTATGGATGGACCTGGAGAATATCATCCTGAGTGAGGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAACAAGTGCGGAGAGCTaGCTCACCTGTTCTATATCC | + |
|
Preference number: 4 (lower is better) Translates to: EKVVILCHVEREALVSLRTSAES*LTCSIS Trigger: GGATATAGAACAGGTGAGCCAGCTCTCCGCACTTGT...TCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CCA 90 bp | AAAGTAATGACTGGAGTGGAAAAGGGGTTTGCATATGCAGCCACATACCTTAAAATCCATTTGGACACCTaGAGGTTTGGGTGTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVMTGVEKGFAYAATYLKIHLDT*RFGCAC Trigger: ACAGGCACACCCAAACCTCCAGGTGTCCAAATGGAT...TTTAAGGTATGTGGCTGCATATGCAAACCCCTTTTCCACTCCAGTCATTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| CDS-3UTR CCA 90 bp | AAAGCACATAGATCAGATGATGGGGCCTTTTTAGCCTATGTTATATGCCTTTCCATCCATTTGGACACCTaGAGGTTTGGGTGTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KAHRSDDGAFLAYVICLSIHLDT*RFGCAC Trigger: ACAGGCACACCCAAACCTCCAGGTGTCCAAATGGAT...GGAAAGGCATATAACATAGGCTAAAAAGGCCCCATCATCTGATCTATGTGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| 3UTR CAA 72 bp | CATCAAGAGACCAAGTTGCTTAAACCAGCAGACATCTaGCTGGTGAGGGGATGTTTTTGCCAACAATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HQETKLLKPADI*LVRGCFCQQFC Trigger: ACAGAATTGTTGGCAAAAACATCCCCTCACCAGCAAGATGTCTGCTGGTTTAAGCAACTTGGTCTCTTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR TCA 90 bp | AACACTGTCAGTAATAGACAGACATATAAAATGATGGTCATAATGGCCACAGTGCACTTCCATGTCCAATaGGTCCTTGACCTCCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTVSNRQTYKMMVIMATVHFHVQ*VLDLRE Trigger: CTCTCGGAGGTCAAGGACTCATTGGACATGGAAGTG...CACTGTGGCCATTATGACCATCATTTTATATGTCTGTCTATTACTGACAGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAGCGGAGTTCTTCATCTaGAATCTTGCCTTGTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EKVVILCHVEREALVSLRAEFFI*NLALSL Trigger: AAGCGACAAGGCAAGATTCCAGATGAAGAACTCCGC...TCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CCA 90 bp | AAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAATATGGCTCATCCGTGGTTTaGGCTGATATTCCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KWLSYAMLKEKPWCLSEYGSSVV*ADIPFL Trigger: CAAGAAGGGAATATCAGCCCAAACCACGGATGAGCC...ATATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGTGCAGCAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACTATTCCCTTCTTGGCTaGGATGAAGCTTGTCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LRVQQSFPDVEDLNSENNYSLLG*DEACLI Trigger: AATAAGACAAGCTTCATCTCAGCCAAGAAGGGAATA...GTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTGCTGCACTCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR TCA 90 bp | GTAATGACTGGAGTGGAAAAGGGGTTTGCATATGCAGCCACATACCTTAAACTGCAGTTCTCGTCAATCTaGTTAGTGAGTGTGATGATA | + |
|
Preference number: 4 (lower is better) Translates to: VMTGVEKGFAYAATYLKLQFSSI*LVSVMI Trigger: TATCATCACACTCACTAATCAGATTGACGAGAACTG...CAGTTTAAGGTATGTGGCTGCATATGCAAACCCCTTTTCCACTCCAGTCATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| CDS-3UTR TCA 90 bp | CACAGCTTCTGTACAGCAAGGAATCTGAGCTTAGAGACCAGATTTCTTCCCAATGAATTTCTACATAGTTaGTGGGGAAAAAGCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: HSFCTARNLSLETRFLPNEFLHS*WGKSQT Trigger: AGTCTGGCTTTTTCCCCATCAACTATGTAGAAATTC...ATTGGGAAGAAATCTGGTCTCTAAGCTCAGATTCCTTGCTGTACAGAAGCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| CDS-3UTR GCA 90 bp | AAGGACATAGGACCTCTAGAAAGGATCCAATTAATGAGGCATCGAGAACCAACCCTTCATCTGGAATCTTaGCTTGTCGCTTCTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KDIGPLERIQLMRHREPTLHLES*LVASSY Trigger: ATAAGAAGAAGCGACAAGGCAAGATTCCAGATGAAG...GGTTGGTTCTCGATGCCTCATTAATTGGATCCTTTCTAGAGGTCCTATGTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| CDS-3UTR CCA 90 bp | AAAGTAATGACTGGAGTGGAAAAGGGGTTTGCATATGCAGCCACATACCTTAAACACTCACTTTCTGAGTaGCTTTGTGGAACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVMTGVEKGFAYAATYLKHSLSE*LCGTAS Trigger: AGAAGCAGTTCCACAAAGCCACTCAGAAAGTGAGTG...TTTAAGGTATGTGGCTGCATATGCAAACCCCTTTTCCACTCCAGTCATTACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
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| CDS-3UTR CCA 90 bp | GAAAAAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAAATTTCTCCAGAGCTTaGCGGAGTTCTTCATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EKVVILCHVEREALVSLRNFSRA*RSSSSG Trigger: TCCAGATGAAGAACTCCGCCAAGCTCTGGAGAAATT...TCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| CDS-3UTR CCA 90 bp | ACATATCAATGGTATCCATGGATACTGCATCTCGTAGCAAGGCTTAAATCATATACAAGTGCGGAGAGCTaGCTCACCTGTTCTATATCC | + |
|
Preference number: 4 (lower is better) Translates to: TYQWYPWILHLVARLKSYTSAES*LTCSIS Trigger: GGATATAGAACAGGTGAGCCAGCTCTCCGCACTTGT...ATATGATTTAAGCCTTGCTACGAGATGCAGTATCCATGGATACCATTGATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR CAA 72 bp | AAAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTaGGTGTCTCTCAGAATATCCTGGGAAGAAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KVVILCHVEREA*VSLRISWEEEL Trigger: CAGTTCTTCTTCCCAGGATATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| CDS-3UTR CCA 90 bp | AAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAATATCACTCACTTTCTGAGTaGCTTTGTGGAACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KWLSYAMLKEKPWCLSEYHSLSE*LCGTAS Trigger: AGAAGCAGTTCCACAAAGCCACTCAGAAAGTGAGTG...ATATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CCA 90 bp | AACACTGTCAGTAATAGACAGACATATAAAATGATGGTCATAATGGCCACAGTGGCGGAGTTCTTCATCTaGAATCTTGCCTTGTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTVSNRQTYKMMVIMATVAEFFI*NLALSL Trigger: AAGCGACAAGGCAAGATTCCAGATGAAGAACTCCGC...CACTGTGGCCATTATGACCATCATTTTATATGTCTGTCTATTACTGACAGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
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| CDS-3UTR TCA 90 bp | AATACCCTGCAACAACGGTTCCATTTAACCTTGGGAGTTAGCATCTTTTTGAGACAGTTCTCGTCAATCTaGTTAGTGAGTGTGATGATA | + |
|
Preference number: 4 (lower is better) Translates to: NTLQQRFHLTLGVSIFLRQFSSI*LVSVMI Trigger: TATCATCACACTCACTAATCAGATTGACGAGAACTG...TCTCAAAAAGATGCTAACTCCCAAGGTTAAATGGAACCGTTGTTGCAGGGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR GCA 90 bp | AAAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAATAGGGTCGATGAAATTCTaGTTCACTTCCATGTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KVVILCHVEREALVSLRIGSMKF*FTSMSN Trigger: ATTGGACATGGAAGTGAAGCAGAATTTCATCGACCC...TATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CCA 90 bp | GCATATGCAGCCACATACCTTAAACTGCTAAGCACAAAAATCATCTTTATTTGGAATTTCTCCAGAGCTTaGCGGAGTTCTTCATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AYAATYLKLLSTKIIFIWNFSRA*RSSSSG Trigger: TCCAGATGAAGAACTCCGCCAAGCTCTGGAGAAATT...CCAAATAAAGATGATTTTTGTGCTTAGCAGTTTAAGGTATGTGGCTGCATATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR GCA 90 bp | AAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAATATCTTCATCTGGAATCTTaGCTTGTCGCTTCTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KWLSYAMLKEKPWCLSEYLHLES*LVASSY Trigger: ATAAGAAGAAGCGACAAGGCAAGATTCCAGATGAAG...ATATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| CDS-3UTR CCA 90 bp | TTGAAACATCCCCAATCCACTGCTTTGATTAATAGTCATATTCGTGTGAAGAAACACTCACTTTCTGAGTaGCTTTGTGGAACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKHPQSTALINSHIRVKKHSLSE*LCGTAS Trigger: AGAAGCAGTTCCACAAAGCCACTCAGAAAGTGAGTG...TTTCTTCACACGAATATGACTATTAATCAAAGCAGTGGATTGGGGATGTTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR CAA 72 bp | AGTATGCTAGAGAAAAAGTGGTTATCTTATGCCATGTaGAAAGAGAAGCCTTGGTGTCTCTCAGAATATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SMLEKKWLSYAM*KEKPWCLSEYP Trigger: AGGATATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTTTTTCTCTAGCATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| 3UTR CAA 72 bp | AAATCTGCCACTTTGAAACATCCCCAATCCACTGCTTaGATTAATAGTCATATTCGTGTGAAGAAACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSATLKHPQSTA*INSHIRVKKPG Trigger: TCCTGGTTTCTTCACACGAATATGACTATTAATCAAAGCAGTGGATTGGGGATGTTTCAAAGTGGCAGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| 3UTR CAA 72 bp | ACAGCTAGACCAAGAAATCATTCTAGTTCTGATAGCTaGGAATCAGTTAGAGGGACTCCCCTAAATTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: TARPRNHSSSDS*ESVRGTPLNFI Trigger: AATAAAATTTAGGGGAGTCCCTCTAACTGATTCCAAGCTATCAGAACTAGAATGATTTCTTGGTCTAGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS GCA 90 bp | ATCACCCAGCTCCCTGCCGAACTTGAGCATGGCCTCTGCCAGCAGTaGTTCCGCCTGAGGGTAGCCTGGCCCCTTCTCTTGGCCGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ITQLPAELEHGLCQQ*FRLRVAWPLLLAAD Trigger: ATCCGCGGCCAAGAGAAGGGGCCAGGCTACCCTCAGGCGGAAGCACTGCTGGCAGAGGCCATGCTCAAGTTCGGCAGGGAGCTGGGTGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
||
| CDS GCA 90 bp | GTTGCAATCATCACCCAGCTCCCTGCCGAACTTGAGCATGGCCTCTaGCAGCAGTGCTTCCGCCTGAGGGTAGCCTGGCCCCTTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VAIITQLPAELEHGL*QQCFRLRVAWPLLL Trigger: CAAGAGAAGGGGCCAGGCTACCCTCAGGCGGAAGCACTGCTGGCAGAGGCCATGCTCAAGTTCGGCAGGGAGCTGGGTGATGATTGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
||
| CDS CCA 90 bp | GGACACCTGGAGGTTTGGGTGTGCCTGTGTGGGAGAGACCCCCGTTaGGCTGAGTACTGTCTCCAGTGGCAAACTCTAGGCTCATCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GHLEVWVCLCGRDPR*AEYCLQWQTLGSSV Trigger: CACGGATGAGCCTAGAGTTTGCCACTGGAGACAGTACTCAGCCCAACGGGGGTCTCTCCCACACAGGCACACCCAAACCTCCAGGTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030212.15 ENSMUST00000107188.10 |
||
| CDS TCA 90 bp | CCTGGAGGTTTGGGTGTGCCTGTGTGGGAGAGACCCCCGTTGGGCTaGGTACTGTCTCCAGTGGCAAACTCTAGGCTCATCCGTGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGGLGVPVWERPPLG*VLSPVANSRLIRGL Trigger: CAAACCACGGATGAGCCTAGAGTTTGCCACTGGAGACAGTACTCAGCCCAACGGGGGTCTCTCCCACACAGGCACACCCAAACCTCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030212.15 ENSMUST00000107188.10 |
||
| CDS TCA 90 bp | GCTGGAGGTTTGGGTGTGCCTGTGTGGGAGAGACCCCCGTTGGGCTaGGTACTGTCTCCAGTGGCAAACTCTAGGCTCATCCGTGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGGLGVPVWERPPLG*VLSPVANSRLIRGL Trigger: CAAACCACGGATGAGCCTAGAGTTTGCCACTGGAGACAGTACTCAGCCCAACGGGGGTCTCTCCCACACAGGCACACCCAAACCTCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133109.2 |
||
| CDS CCA 90 bp | CTTGAGCATGGCCTCTGCCAGCAGTGCTTCCGCCTGAGGGTAGCCTaGCCCCTTCTCTTGGCCGCGGATTTTCGACATGGTGTTGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LEHGLCQQCFRLRVA*PLLLAADFRHGVDH Trigger: ATGATCAACACCATGTCGAAAATCCGCGGCCAAGAGAAGGGGCCAGGCTACCCTCAGGCGGAAGCACTGCTGGCAGAGGCCATGCTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
||
| CDS-3UTR CAA 90 bp | TGCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGGAAGCAGCACGAGCTCCCTGCCGAACTaGAGCATGGCCTCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLSLHTIHYRKWHIGSSTSSLPN*SMASAS Trigger: GCTGGCAGAGGCCATGCTCAAGTTCGGCAGGGAGCT...CGTGCTGCTTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CAA 90 bp | TGCCTTTCACTCCACACGATCCACTACCGCAAGTGGCATATCGGAAGCAGCACGTGGACACCTGGAGGTTaGGGTGTGCCTGTGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLSLHTIHYRKWHIGSSTWTPGG*GVPVWE Trigger: CTCCCACACAGGCACACCCAAACCTCCAGGTGTCCA...CGTGCTGCTTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS CCA 90 bp | TGCCTGTGTGGGAGAGACCCCCGTTGGGCTGAGTACTGTCTCCAGTaGCAAACTCTAGGCTCATCCGTGGTTTGGGCTGATATTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLCGRDPRWAEYCLQ*QTLGSSVVWADIPF Trigger: GAAGGGAATATCAGCCCAAACCACGGATGAGCCTAGAGTTTGCCACTGGAGACAGTACTCAGCCCAACGGGGGTCTCTCCCACACAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030212.15 ENSMUST00000107188.10 ENSMUST00000133109.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTGCAGCTGTGATCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCAGCCCTGGAAGCTGGATaGGGTTGGAGGTATTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: QGCSCDPGLMALGLQCLSALEAG*GWRYSI Trigger: GATTGAATACCTCCAACCCAATCCAGCTTCCAGGGC...TGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGATCACAGCTGCAGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS TCA 90 bp | GCGCCTGCCCATGCGAGAAGCAGCTTCTTCGCACAAATCCATGCCTaGAGTCTGAAGCATCTGCCCAGTGACTTCAGCTCTTTCCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: APAHARSSFFAQIHA*SLKHLPSDFSSFQE Trigger: CTCTTGGAAAGAGCTGAAGTCACTGGGCAGATGCTTCAGACTTCAGGCATGGATTTGTGCGAAGAAGCTGCTTCTCGCATGGGCAGGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGATCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTATGGAGCCTGGCCCCTTCTCTaGGCCGCGGATTTTCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SCDPGLMALGLQCLSSYGAWPLL*AADFRH Trigger: ATGTCGAAAATCCGCGGCCAAGAGAAGGGGCCAGGC...TCCATAAGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGATCACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR CAA 90 bp | TGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTATGGAGCTGTAGGAAAAGCTCCCTGCCGAACTaGAGCATGGCCTCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WIDGPWSPVPFILWSCRKSSLPN*SMASAS Trigger: GCTGGCAGAGGCCATGCTCAAGTTCGGCAGGGAGCT...TTTCCTACAGCTCCATAAGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS GCA 90 bp | GATCTGCACTGCCTGCTTGTGGTACTCCAGCTGAGCCTGAACAAGTaGGGAGAGCTGGCTCACCTGTTCTATATCCATCTCCAAGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DLHCLLVVLQLSLNK*GELAHLFYIHLQEV Trigger: AACCTCTTGGAGATGGATATAGAACAGGTGAGCCAGCTCTCCGCACTTGTTCAGGCTCAGCTGGAGTACCACAAGCAGGCAGTGCAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030212.15 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
||
| CDS TCA 90 bp | ATTCTGAAGGGGGTCGATGAAATTCTGCTTCACTTCCATGTCCAATaGGTCCTTGACCTCCGAGAGCTCCCTCATGGCTTCTCCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILKGVDEILLHFHVQ*VLDLRELPHGFSHL Trigger: GAGGTGGGAGAAGCCATGAGGGAGCTCTCGGAGGTCAAGGACTCATTGGACATGGAAGTGAAGCAGAATTTCATCGACCCCCTTCAGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACTGCGTCGAGGGCCTGGCCCCTTCTCTaGGCCGCGGATTTTCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SRVSQMWKISTVKITASRAWPLL*AADFRH Trigger: ATGTCGAAAATCCGCGGCCAAGAGAAGGGGCCAGGC...CCTCGACGCAGTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGTGCAGCAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACAGCTCCCTGCCGAACTaGAGCATGGCCTCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRVQQSFPDVEDLNSENNSSLPN*SMASAS Trigger: GCTGGCAGAGGCCATGCTCAAGTTCGGCAGGGAGCT...GTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTGCTGCACTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | TCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTATGGAGCTGTAGGAGAGCAGGACCAAAGTaGCAATCATCACCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SWIDGPWSPVPFILWSCRRAGPK*QSSPSS Trigger: GGAGCTGGGTGATGATTGCAACTTTGGTCCTGCTCT...CCTACAGCTCCATAAGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTGCAGCTGTGATCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCAATTTTCGACATGGTGTaGATCATACTGAGCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGCSCDPGLMALGLQCLSIFDMV*IILSLA Trigger: GGCTAAGCTCAGTATGATCAACACCATGTCGAAAAT...TGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGATCACAGCTGCAGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCCCTTCCTGTACCCTTCAGAAACGGGCTACGTATATACACAGCTTCTGTAAGAGCAGGACCAAAGTaGCAATCATCACCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPLPVPFRNGLRIYTASVRAGPK*QSSPSS Trigger: GGAGCTGGGTGATGATTGCAACTTTGGTCCTGCTCT...TACAGAAGCTGTGTATATACGTAGCCCGTTTCTGAAGGGTACAGGAAGGGGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CAA 90 bp | CTGGGAAGAAGAACTGAGAGTGCAGCAGAGTTTCCCAGATGTGGAAGATCTCAATCCATCTCCAAGAGGTaGAACATGCTCGACTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LGRRTESAAEFPRCGRSQSISKR*NMLDSA Trigger: CGCCGAGTCGAGCATGTTCAACCTCTTGGAGATGGA...TTGAGATCTTCCACATCTGGGAAACTCTGCTGCACTCTCAGTTCTTCTTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | GATGTTCAAGGAACACAAACAAGTAAACGTGGGAAGGAGCGATGCTCACTGTCTGCAGGGCTGATCCATTaGGACACCTGGAGGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DVQGTQTSKRGKERCSLSAGLIH*DTWRFG Trigger: CCCAAACCTCCAGGTGTCCAAATGGATCAGCCCTGC...AGACAGTGAGCATCGCTCCTTCCCACGTTTACTTGTTTGTGTTCCTTGAACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTTATACATTAAGCAGGAAGATTTGCCTTTCACTCCACACGATCCACTAGCCTGGCCCCTTCTCTaGGCCGCGGATTTTCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: VSLYIKQEDLPFTPHDPLAWPLL*AADFRH Trigger: ATGTCGAAAATCCGCGGCCAAGAGAAGGGGCCAGGC...TAGTGGATCGTGTGGAGTGAAAGGCAAATCTTCCTGCTTAATGTATAAACTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CAA 90 bp | AAAGCACATAGATCAGATGATGGGGCCTTTTTAGCCTATGTTATATGCCTTTCCTGGACACCTGGAGGTTaGGGTGTGCCTGTGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KAHRSDDGAFLAYVICLSWTPGG*GVPVWE Trigger: CTCCCACACAGGCACACCCAAACCTCCAGGTGTCCA...GGAAAGGCATATAACATAGGCTAAAAAGGCCCCATCATCTGATCTATGTGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | CATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAATATCCTGGGAAGAAGAACTGGCCCTGGAAGCTGGATaGGGTTGGAGGTATTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: HVEREALVSLRISWEEELALEAG*GWRYSI Trigger: GATTGAATACCTCCAACCCAATCCAGCTTCCAGGGC...CAGTTCTTCTTCCCAGGATATTCTGAGAGACACCAAGGCTTCTCTTTCAACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | ACATATCAATGGTATCCATGGATACTGCATCTCGTAGCAAGGCTTAAATCATATAGCTCCCTGCCGAACTaGAGCATGGCCTCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TYQWYPWILHLVARLKSYSSLPN*SMASAS Trigger: GCTGGCAGAGGCCATGCTCAAGTTCGGCAGGGAGCT...ATATGATTTAAGCCTTGCTACGAGATGCAGTATCCATGGATACCATTGATATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CAA 90 bp | CTCATCTGCCAAGTGCTTAACAGCAGGGAGGGAAGAAAACTGGCCATGTCTCAGTCTTCATCTGGAATCTaGCCTTGTCGCTTCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LICQVLNSREGRKLAMSQSSSGI*PCRFFL Trigger: TAAGAAGAAGCGACAAGGCAAGATTCCAGATGAAGA...CTGAGACATGGCCAGTTTTCTTCCCTCCCTGCTGTTAAGCACTTGGCAGATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CAA 90 bp | TGTTCTATGGAGTGGGAAATGCTTACTAGTGTTTCTCTCCTACGTCTTTGTGGTTCCATCTCCAAGAGGTaGAACATGCTCGACTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CSMEWEMLTSVSLLRLCGSISKR*NMLDSA Trigger: CGCCGAGTCGAGCATGTTCAACCTCTTGGAGATGGA...ACCACAAAGACGTAGGAGAGAAACACTAGTAAGCATTTCCCACTCCATAGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CAA 90 bp | GGGGCCTTTTTAGCCTATGTTATATGCCTTTCCACCACCTGGCATCTCACATTGGCTGATATTCCCTTCTaGGCTGAGATGAAGCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GAFLAYVICLSTTWHLTLADIPF*AEMKLV Trigger: GACAAGCTTCATCTCAGCCAAGAAGGGAATATCAGC...CAATGTGAGATGCCAGGTGGTGGAAAGGCATATAACATAGGCTAAAAAGGCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | GTTCTATGGAGTGGGAAATGCTTACTAGTGTTTCTCTCCTACGTCTTTGTGGTAGCCCTGGAAGCTGGATaGGGTTGGAGGTATTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: VLWSGKCLLVFLSYVFVVALEAG*GWRYSI Trigger: GATTGAATACCTCCAACCCAATCCAGCTTCCAGGGC...TACCACAAAGACGTAGGAGAGAAACACTAGTAAGCATTTCCCACTCCATAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CAA 90 bp | ACATATCAATGGTATCCATGGATACTGCATCTCGTAGCAAGGCTTAAATCATATGCCTGGCCCCTTCTCTaGGCCGCGGATTTTCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: TYQWYPWILHLVARLKSYAWPLL*AADFRH Trigger: ATGTCGAAAATCCGCGGCCAAGAGAAGGGGCCAGGC...ATATGATTTAAGCCTTGCTACGAGATGCAGTATCCATGGATACCATTGATATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CAA 90 bp | AAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAATATGCAGGGCTGATCCATTaGGACACCTGGAGGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KWLSYAMLKEKPWCLSEYAGLIH*DTWRFG Trigger: CCCAAACCTCCAGGTGTCCAAATGGATCAGCCCTGC...ATATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | GATGTTCAAGGAACACAAACAAGTAAACGTGGGAAGGAGCGATGCTCACTGTCTGGAAGCTGGATTGGGTaGGAGGTATTCAATCGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: DVQGTQTSKRGKERCSLSGSWIG*EVFNRF Trigger: AAAACGATTGAATACCTCCAACCCAATCCAGCTTCC...AGACAGTGAGCATCGCTCCTTCCCACGTTTACTTGTTTGTGTTCCTTGAACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CAA 90 bp | CTGGGAAGAAGAACTGAGAGTGCAGCAGAGTTTCCCAGATGTGGAAGATCTCAAATTTTCGACATGGTGTaGATCATACTGAGCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGRRTESAAEFPRCGRSQIFDMV*IILSLA Trigger: GGCTAAGCTCAGTATGATCAACACCATGTCGAAAAT...TTGAGATCTTCCACATCTGGGAAACTCTGCTGCACTCTCAGTTCTTCTTCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | AATACCCTGCAACAACGGTTCCATTTAACCTTGGGAGTTAGCATCTTTTTGAGAAGAGCAGGACCAAAGTaGCAATCATCACCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NTLQQRFHLTLGVSIFLRRAGPK*QSSPSS Trigger: GGAGCTGGGTGATGATTGCAACTTTGGTCCTGCTCT...TCTCAAAAAGATGCTAACTCCCAAGGTTAAATGGAACCGTTGTTGCAGGGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGAAGAAGAACTGAGAGTGCAGCAGAGTTTCCCAGATGTGGAAGATCTCATCTGGAATCTTGCCTaGTCGCTTCTTCTTATAATC | + |
|
Preference number: 5 (lower is better) Translates to: SWEEELRVQQSFPDVEDLIWNLA*SLLLII Trigger: GATTATAAGAAGAAGCGACAAGGCAAGATTCCAGAT...GAGATCTTCCACATCTGGGAAACTCTGCTGCACTCTCAGTTCTTCTTCCCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | ATTACCAAAGCAGTGGTTAAACTTAACTATCTGGGTCAGAAGGAGGTGAGCCAGGCTGATATTCCCTTCTaGGCTGAGATGAAGCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ITKAVVKLNYLGQKEVSQADIPF*AEMKLV Trigger: GACAAGCTTCATCTCAGCCAAGAAGGGAATATCAGC...CTGGCTCACCTCCTTCTGACCCAGATAGTTAAGTTTAACCACTGCTTTGGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS TCA 90 bp | GCCGGGATCAACACCAGAACCAAAAGTCTACAGTTCTCGTCAATCTaGTTAGTGAGTGTGATGATATCGCCCTCTTTAAAACCCAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGINTRTKSLQFSSI*LVSVMISPSLKPNS Trigger: GGAATTGGGTTTTAAAGAGGGCGATATCATCACACTCACTAATCAGATTGACGAGAACTGTAGACTTTTGGTTCTGGTGTTGATCCCGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | GATCCTGGATTGATGGCCCTTGGTCTCCAGTGCCTTTCATCTTATGGAGCTGTAGGTATTCAATCGTTTTaGTCATTATCTCCATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: DPGLMALGLQCLSSYGAVGIQSF*SLSPSQ Trigger: CTGTGATGGAGATAATGACAAAAACGATTGAATACC...TACAGCTCCATAAGATGAAAGGCACTGGAGACCAAGGGCCATCAATCCAGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
||
| CDS-3UTR CAA 90 bp | GATGTTCAAGGAACACAAACAAGTAAACGTGGGAAGGAGCGATGCTCACTGTCTATTTTCGACATGGTGTaGATCATACTGAGCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DVQGTQTSKRGKERCSLSIFDMV*IILSLA Trigger: GGCTAAGCTCAGTATGATCAACACCATGTCGAAAAT...AGACAGTGAGCATCGCTCCTTCCCACGTTTACTTGTTTGTGTTCCTTGAACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CAA 90 bp | TTTTCTGTCGTGTCTGTAGTCCCACTTGGTAATCTTGCATGCATAATACTAACTAGAGCAGGACCAAAGTaGCAATCATCACCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSVVSVVPLGNLACIILTRAGPK*QSSPSS Trigger: GGAGCTGGGTGATGATTGCAACTTTGGTCCTGCTCT...AGTTAGTATTATGCATGCAAGATTACCAAGTGGGACTACAGACACGACAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGCCTTTTTAGCCTATGTTATATGCCTTTCCACCACCTGGCATCTCACATTTCTTCATCTGGAATCTaGCCTTGTCGCTTCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: WGLFSLCYMPFHHLASHISSSGI*PCRFFL Trigger: TAAGAAGAAGCGACAAGGCAAGATTCCAGATGAAGA...AATGTGAGATGCCAGGTGGTGGAAAGGCATATAACATAGGCTAAAAAGGCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | AACACTGTCAGTAATAGACAGACATATAAAATGATGGTCATAATGGCCACAGTGGCCCTGGAAGCTGGATaGGGTTGGAGGTATTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: NTVSNRQTYKMMVIMATVALEAG*GWRYSI Trigger: GATTGAATACCTCCAACCCAATCCAGCTTCCAGGGC...CACTGTGGCCATTATGACCATCATTTTATATGTCTGTCTATTACTGACAGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACATAGGACCTCTAGAAAGGATCCAATTAATGAGGCATCGAGAACCAACCATTTTCGACATGGTGTaGATCATACTGAGCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KDIGPLERIQLMRHREPTIFDMV*IILSLA Trigger: GGCTAAGCTCAGTATGATCAACACCATGTCGAAAAT...GGTTGGTTCTCGATGCCTCATTAATTGGATCCTTTCTAGAGGTCCTATGTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGCCAACATACAGATTGCTCACCATCTCACTCAGAAATAAATGGGACCCCCATCTGGAATCTTGCCTaGTCGCTTCTTCTTATAATC | + |
|
Preference number: 5 (lower is better) Translates to: FSQHTDCSPSHSEINGTPIWNLA*SLLLII Trigger: GATTATAAGAAGAAGCGACAAGGCAAGATTCCAGAT...GGGGGTCCCATTTATTTCTGAGTGAGATGGTGAGCAATCTGTATGTTGGCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CAA 90 bp | TTGAAACATCCCCAATCCACTGCTTTGATTAATAGTCATATTCGTGTGAAGAAATCCATCTCCAAGAGGTaGAACATGCTCGACTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LKHPQSTALINSHIRVKKSISKR*NMLDSA Trigger: CGCCGAGTCGAGCATGTTCAACCTCTTGGAGATGGA...TTTCTTCACACGAATATGACTATTAATCAAAGCAGTGGATTGGGGATGTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGTTTCCCAGATGTGGAAGATCTCAACAGTGAAAATAACTGCGTCGAGGAGGGTATTCAATCGTTTTaGTCATTATCTCCATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QSFPDVEDLNSENNCVEEGIQSF*SLSPSQ Trigger: CTGTGATGGAGATAATGACAAAAACGATTGAATACC...CTCCTCGACGCAGTTATTTTCACTGTTGAGATCTTCCACATCTGGGAAACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS-3UTR CAA 90 bp | GAACAAAACGAAAACCCAACACTGATCAGCGTACACAGCACTGTACACACAAAAGGTATTCAATCGTTTTaGTCATTATCTCCATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: EQNENPTLISVHSTVHTKGIQSF*SLSPSQ Trigger: CTGTGATGGAGATAATGACAAAAACGATTGAATACC...TTTTGTGTGTACAGTGCTGTGTACGCTGATCAGTGTTGGGTTTTCGTTTTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030212.15 |
||
| CDS-3UTR CAA 90 bp | AGGACATATCAATGGTATCCATGGATACTGCATCTCGTAGCAAGGCTTAAATCAATCTGGAATCTTGCCTaGTCGCTTCTTCTTATAATC | + |
|
Preference number: 5 (lower is better) Translates to: RTYQWYPWILHLVARLKSIWNLA*SLLLII Trigger: GATTATAAGAAGAAGCGACAAGGCAAGATTCCAGAT...TGATTTAAGCCTTGCTACGAGATGCAGTATCCATGGATACCATTGATATGTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CAA 90 bp | GAGACAGCTAGACCAAGAAATCATTCTAGTTCTGATAGCTTGGAATCAGTTAGATCTTCATCTGGAATCTaGCCTTGTCGCTTCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: ETARPRNHSSSDSLESVRSSSGI*PCRFFL Trigger: TAAGAAGAAGCGACAAGGCAAGATTCCAGATGAAGA...TCTAACTGATTCCAAGCTATCAGAACTAGAATGATTTCTTGGTCTAGCTGTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTAGACCAAGAAATCATTCTAGTTCTGATAGCTTGGAATCAGTTAGAGGGAGGTATTCAATCGTTTTaGTCATTATCTCCATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QLDQEIILVLIAWNQLEGGIQSF*SLSPSQ Trigger: CTGTGATGGAGATAATGACAAAAACGATTGAATACC...TCCCTCTAACTGATTCCAAGCTATCAGAACTAGAATGATTTCTTGGTCTAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107189.8 |
||
| CDS-3UTR CAA 90 bp | AAGTGGTTATCTTATGCCATGTTGAAAGAGAAGCCTTGGTGTCTCTCAGAATATGTAGGACACCATTCTTaGAGTTGTTTACTTGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KWLSYAMLKEKPWCLSEYVGHHS*SCLLVV Trigger: TACTACAAGTAAACAACTCAAAGAATGGTGTCCTAC...ATATTCTGAGAGACACCAAGGCTTCTCTTTCAACATGGCATAAGATAACCACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
||
| CDS GCA 72 bp | ATCACCCAGCTCCCTGCCGAACTTGAGCATGGCCTCTaGCAGCAGTGCTTCCGCCTGAGGGTAGCCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ITQLPAELEHGL*QQCFRLRVAWP Trigger: GGGCCAGGCTACCCTCAGGCGGAAGCACTGCTGGCAGAGGCCATGCTCAAGTTCGGCAGGGAGCTGGGTGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
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| CDS CCA 72 bp | GGCCTCTGCCAGCAGTGCTTCCGCCTGAGGGTAGCCTaGCCCCTTCTCTTGGCCGCGGATTTTCGACATGGT | + |
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Preference number: 6 (lower is better) Translates to: GLCQQCFRLRVA*PLLLAADFRHG Trigger: ACCATGTCGAAAATCCGCGGCCAAGAGAAGGGGCCAGGCTACCCTCAGGCGGAAGCACTGCTGGCAGAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
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| CDS GCA 72 bp | ATACAGAGCTCGGCAGCAGGGCTGGAGGTTTGGGTGTaGCTGTGTGGGAGAGACCCCCGTTGGGCTGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: IQSSAAGLEVWV*LCGRDPRWAEY Trigger: GTACTCAGCCCAACGGGGGTCTCTCCCACACAGGCACACCCAAACCTCCAGCCCTGCTGCCGAGCTCTGTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133109.2 |
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| CDS GCA 72 bp | CACGTCCTCCTGAGGTCCATTCCACGCGCCTGCCCATaGGAGAAGCAGCTTCTTCGCACAAATCCATGCCTG | + |
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Preference number: 6 (lower is better) Translates to: HVLLRSIPRACP*EKQLLRTNPCL Trigger: CAGGCATGGATTTGTGCGAAGAAGCTGCTTCTCGCATGGGCAGGCGCGTGGAATGGACCTCAGGAGGACGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| CDS CCA 72 bp | GAGGTTTGGGTGTGCCTGTGTGGGAGAGACCCCCGTTaGGCTGAGTACTGTCTCCAGTGGCAAACTCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: EVWVCLCGRDPR*AEYCLQWQTLG Trigger: GCCTAGAGTTTGCCACTGGAGACAGTACTCAGCCCAACGGGGGTCTCTCCCACACAGGCACACCCAAACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030212.15 ENSMUST00000107188.10 ENSMUST00000133109.2 |
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| CDS CAA 90 bp | CTCTGCCAGCAGTGCTTCCGCCTGAGGGTAGCCTGGCCCCTTCTCTaGGCCGCGGATTTTCGACATGGTGTTGATCATACTGAGCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: LCQQCFRLRVAWPLL*AADFRHGVDHTELS Trigger: GCTAAGCTCAGTATGATCAACACCATGTCGAAAATCCGCGGCCAAGAGAAGGGGCCAGGCTACCCTCAGGCGGAAGCACTGCTGGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
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| CDS CAA 90 bp | AGCTCCCTCATGGCTTCTCCCACCTCACCGAGAGCAGGACCAAAGTaGCAATCATCACCCAGCTCCCTGCCGAACTTGAGCATGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSLMASPTSPRAGPK*QSSPSSLPNLSMAS Trigger: AGAGGCCATGCTCAAGTTCGGCAGGGAGCTGGGTGATGATTGCAACTTTGGTCCTGCTCTCGGTGAGGTGGGAGAAGCCATGAGGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
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| CDS TCA 72 bp | TTGGGTGTGCCTGTGTGGGAGAGACCCCCGTTGGGCTaGGTACTGTCTCCAGTGGCAAACTCTAGGCTCATC | + |
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Preference number: 6 (lower is better) Translates to: LGVPVWERPPLG*VLSPVANSRLI Trigger: GATGAGCCTAGAGTTTGCCACTGGAGACAGTACTCAGCCCAACGGGGGTCTCTCCCACACAGGCACACCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030212.15 ENSMUST00000107188.10 ENSMUST00000133109.2 |
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| CDS CCA 72 bp | GGGAGAGACCCCCGTTGGGCTGAGTACTGTCTCCAGTaGCAAACTCTAGGCTCATCCGTGGTTTGGGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: GRDPRWAEYCLQ*QTLGSSVVWAD Trigger: ATCAGCCCAAACCACGGATGAGCCTAGAGTTTGCCACTGGAGACAGTACTCAGCCCAACGGGGGTCTCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030212.15 ENSMUST00000107188.10 ENSMUST00000133109.2 |
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| CDS CAA 72 bp | CAGTGCTTCCGCCTGAGGGTAGCCTGGCCCCTTCTCTaGGCCGCGGATTTTCGACATGGTGTTGATCATACT | + |
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Preference number: 6 (lower is better) Translates to: QCFRLRVAWPLL*AADFRHGVDHT Trigger: AGTATGATCAACACCATGTCGAAAATCCGCGGCCAAGAGAAGGGGCCAGGCTACCCTCAGGCGGAAGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
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| CDS CAA 90 bp | AGGGGGTCGATGAAATTCTGCTTCACTTCCATGTCCAATGAGTCCTaGACCTCCGAGAGCTCCCTCATGGCTTCTCCCACCTCACCGAGA | + |
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Preference number: 6 (lower is better) Translates to: RGSMKFCFTSMSNES*TSESSLMASPTSPR Trigger: TCTCGGTGAGGTGGGAGAAGCCATGAGGGAGCTCTCGGAGGTCAAGGACTCATTGGACATGGAAGTGAAGCAGAATTTCATCGACCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
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| CDS GCA 72 bp | TGCCTGCTTGTGGTACTCCAGCTGAGCCTGAACAAGTaGGGAGAGCTGGCTCACCTGTTCTATATCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: CLLVVLQLSLNK*GELAHLFYIHL Trigger: GAGATGGATATAGAACAGGTGAGCCAGCTCTCCGCACTTGTTCAGGCTCAGCTGGAGTACCACAAGCAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030212.15 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
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| CDS CAA 72 bp | GGCCCCTTCTCTTGGCCGCGGATTTTCGACATGGTGTaGATCATACTGAGCTTAGCCCTGGAAGCTGGATTG | + |
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Preference number: 6 (lower is better) Translates to: GPFSWPRIFDMV*IILSLALEAGL Trigger: CAATCCAGCTTCCAGGGCTAAGCTCAGTATGATCAACACCATGTCGAAAATCCGCGGCCAAGAGAAGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 |
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| CDS TCA 72 bp | GGGGTCGATGAAATTCTGCTTCACTTCCATGTCCAATaGGTCCTTGACCTCCGAGAGCTCCCTCATGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GVDEILLHFHVQ*VLDLRELPHGF Trigger: GAAGCCATGAGGGAGCTCTCGGAGGTCAAGGACTCATTGGACATGGAAGTGAAGCAGAATTTCATCGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
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| CDS CCA 72 bp | CACGTGCCCTCTTCTGTGTATCCCAGGGAGACTGTCTaGGAAATGAGAATCTGCGTGTGTGTGAGAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: HVPSSVYPRETV*EMRICVCVRRR Trigger: CCTTCTTCTCACACACACGCAGATTCTCATTTCCCAGACAGTCTCCCTGGGATACACAGAAGAGGGCACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107184.8 |
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| CDS TCA 72 bp | CATGCGAGAAGCAGCTTCTTCGCACAAATCCATGCCTaGAGTCTGAAGCATCTGCCCAGTGACTTCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HARSSFFAQIHA*SLKHLPSDFSS Trigger: AGAGCTGAAGTCACTGGGCAGATGCTTCAGACTTCAGGCATGGATTTGTGCGAAGAAGCTGCTTCTCGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| CDS CAA 72 bp | ATGAAATTCTGCTTCACTTCCATGTCCAATGAGTCCTaGACCTCCGAGAGCTCCCTCATGGCTTCTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: MKFCFTSMSNES*TSESSLMASPT Trigger: GGTGGGAGAAGCCATGAGGGAGCTCTCGGAGGTCAAGGACTCATTGGACATGGAAGTGAAGCAGAATTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030212.15 ENSMUST00000107184.8 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
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| CDS CCA 72 bp | TGTCTCCAGTGGCAAACTCTAGGCTCATCCGTGGTTTaGGCTGATATTCCCTTCTTGGCTGAGATGAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: CLQWQTLGSSVV*ADIPFLAEMKL Trigger: AAGCTTCATCTCAGCCAAGAAGGGAATATCAGCCCAAACCACGGATGAGCCTAGAGTTTGCCACTGGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030212.15 ENSMUST00000107188.10 ENSMUST00000133109.2 |
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| CDS CAA 90 bp | GCCAAGCAAAACACTCCAGTGCCAGGTAGGACACCATTCTTTGAGTaGTTTACTTGTAGTATAGTCATCCTCAAGTGGGGAGTCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: AKQNTPVPGRTPFFE*FTCSIVILKWGVSW Trigger: CCAAGAGACTCCCCACTTGAGGATGACTATACTACAAGTAAACAACTCAAAGAATGGTGTCCTACCTGGCACTGGAGTGTTTTGCTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| CDS GCA 72 bp | CCAAGAGGACATGGGTTGCCAAGCAAAACACTCCAGTaGCAGGTAGGACACCATTCTTTGAGTTGTTTACTT | + |
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Preference number: 6 (lower is better) Translates to: PRGHGLPSKTLQ*QVGHHSLSCLL Trigger: AAGTAAACAACTCAAAGAATGGTGTCCTACCTGGCACTGGAGTGTTTTGCTTGGCAACCCATGTCCTCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| CDS CAA 72 bp | AGCTGGCTCACCTGTTCTATATCCATCTCCAAGAGGTaGAACATGCTCGACTCGGCGATTTCTTTAGACTCA | + |
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Preference number: 6 (lower is better) Translates to: SWLTCSISISKR*NMLDSAISLDS Trigger: TGAGTCTAAAGAAATCGCCGAGTCGAGCATGTTCAACCTCTTGGAGATGGATATAGAACAGGTGAGCCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030212.15 ENSMUST00000107188.10 ENSMUST00000107189.8 ENSMUST00000133109.2 |
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| CDS CAA 72 bp | AACACTCCAGTGCCAGGTAGGACACCATTCTTTGAGTaGTTTACTTGTAGTATAGTCATCCTCAAGTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: NTPVPGRTPFFE*FTCSIVILKWG Trigger: TCCCCACTTGAGGATGACTATACTACAAGTAAACAACTCAAAGAATGGTGTCCTACCTGGCACTGGAGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| CDS GCA 72 bp | TATAGTCATCCTCAAGTGGGGAGTCTCTTGGGAAACTaGCACAATGTTTGTCTTAGTAAGGTTTTCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: YSHPQVGSLLGN*HNVCLSKVFCC Trigger: GCAACAGAAAACCTTACTAAGACAAACATTGTGGCAGTTTCCCAAGAGACTCCCCACTTGAGGATGACTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| CDS GCA 72 bp | AACTGCCACAATGTTTGTCTTAGTAAGGTTTTCTGTTaGCGGGATCAACACCAGAACCAAAAGTCTACAGTT | + |
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Preference number: 6 (lower is better) Translates to: NCHNVCLSKVFC*RDQHQNQKSTV Trigger: AACTGTAGACTTTTGGTTCTGGTGTTGATCCCGGCAACAGAAAACCTTACTAAGACAAACATTGTGGCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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| CDS CCA 72 bp | TTTGAGTTGTTTACTTGTAGTATAGTCATCCTCAAGTaGGGAGTCTCTTGGGAAACTGCCACAATGTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: FELFTCSIVILK*GVSWETATMFV Trigger: GACAAACATTGTGGCAGTTTCCCAAGAGACTCCCCACTTGAGGATGACTATACTACAAGTAAACAACTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107188.10 |
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