Pregenerated sensors for SH3D21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073758Ensembl transcript IDs: ENSMUST00000094760.9, ENSMUST00000097891.4
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTaGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: HGVCQSCVQGPG*PKQDRCPSRLG Trigger: ACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR GCA 90 bp | CAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGCTTGGCTCTGCCCGGTaGAGAGGCCGCTGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QSCVQGPGWPKQDRCPSRLGSAR*RGRCCQ Trigger: CTGGCAGCAGCGGCCTCTGCACCGGGCAGAGCCAAG...CCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | GACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGAGCCTTGGACTGGGCTaGGAAGGAGCCGTTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: DRGGPSRIDVPPGWVEVRSLGLG*EGAVHL Trigger: CAGGTGAACGGCTCCTTCCCAGCCCAGTCCAAGGCT...CCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR TCA 90 bp | GACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGTTCCTCTGCATCATCTaGACCTCCGGCGACAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: DRGGPSRIDVPPGWVEVRFLCII*TSGDRS Trigger: GCTCCTGTCGCCGGAGGTTCAGATGATGCAGAGGAA...CCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR TCA 90 bp | TGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCGGGGGTCCCGAGAGTTaGTGGGGTGACGGCGACTAC | + |
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Preference number: 4 (lower is better) Translates to: CQSCVQGPGWPKQDRCPSGGPES*WGDGDY Trigger: GTAGTCGCCGTCACCCCATCAACTCTCGGGACCCCC...GGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | GACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGATAGTGTGTGGCACTTaGGGGGTGGGGGCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: DRGGPSRIDVPPGWVEVRIVCGT*GVGADS Trigger: AGAGTCAGCCCCCACCCCCCAAGTGCCACACACTAT...CCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR GCA 90 bp | GGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGCCTGAAGGGTGCTCTCTGGAGTaGCAGCCTTGTCCAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: GGPSRIDVPPGWVEVRPEGCSLE*QPCPEW Trigger: CCACTCTGGACAAGGCTGGCACTCCAGAGAGCACCC...TTCAGGCCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR TCA 90 bp | GACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGCACCTGGATGTTATTTaGGGGTGCAGGAGACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: DRGGPSRIDVPPGWVEVRHLDVI*GCRRLR Trigger: CCTGAGTCTCCTGCACCCTCAAATAACATCCAGGTG...CCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR TCA 90 bp | GTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCACAGCAGGACCTCTCTaGGGAGTCAGGCGGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VCQSCVQGPGWPKQDRCPTAGPL*GVRRWG Trigger: TCCCCACCGCCTGACTCCTCAGAGAGGTCCTGCTGT...GGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGCCTTGGACTGGGCTaGGAAGGAGCCGTTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: CQSCVQGPGWPKQDRCPSSLGLG*EGAVHL Trigger: CAGGTGAACGGCTCCTTCCCAGCCCAGTCCAAGGCT...GGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | GACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGTGTATTTCCAAGGCTTaGGGGCCCACTGTCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: DRGGPSRIDVPPGWVEVRCISKA*GPTVQQ Trigger: TTGCTGGACAGTGGGCCCCCAAGCCTTGGAAATACA...CCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
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| CDS-3UTR TCA 90 bp | GACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGTTGGGGGCGGTGGGATaGCAAAGTTGTCAGGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: DRGGPSRIDVPPGWVEVRLGAVG*QSCQEK Trigger: TTTTTCCTGACAACTTTGTCATCCCACCGCCCCCAA...CCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR TCA 90 bp | TCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAACAGCAGGACCTCTCTaGGGAGTCAGGCGGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SMEFVKVVCKDRGGPSRITAGPL*GVRRWG Trigger: TCCCCACCGCCTGACTCCTCAGAGAGGTCCTGCTGT...TATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR GCA 90 bp | ACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGACCAGGTCCCCCTTCTaGAGTGCCAGCTCATCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TSMEFVKVVCKDRGGPSRTRSPF*SASSSG Trigger: CCCAGATGAGCTGGCACTGCAGAAGGGGGACCTGGT...CCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR GCA 90 bp | ACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGGGGAAGGCTCCCAACTaGCCGTTCTTCTCTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TSMEFVKVVCKDRGGPSRGKAPN*PFFSPS Trigger: GCTGGGAGAGAAGAACGGGCAGTTGGGAGCCTTCCC...CCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | CAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGGTGTTGAAAGTGTCTTaGCTCTGCCCGGTGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QSCVQGPGWPKQDRCPSRVLKVS*LCPVQR Trigger: CCTCTGCACCGGGCAGAGCCAAGACACTTTCAACAC...CCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCACACATCCTCAGCCTTaGACTGGGCTGGGAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: CQSCVQGPGWPKQDRCPSTHPQP*TGLGRS Trigger: GCTCCTTCCCAGCCCAGTCCAAGGCTGAGGATGTGT...GGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | CAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGGGAAGCACCTGCTTTTaGGGACCCGCCCTTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: QSCVQGPGWPKQDRCPSRGSTCF*GPALSE Trigger: TTCTGAAAGGGCGGGTCCCCAAAAGCAGGTGCTTCC...CCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR TCA 90 bp | GGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGCCTGAACACCTGGATGTTATTTaGGGGTGCAGGAGACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GGPSRIDVPPGWVEVRPEHLDVI*GCRRLR Trigger: CCTGAGTCTCCTGCACCCTCAAATAACATCCAGGTG...TTCAGGCCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR GCA 90 bp | CAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGAGTCAAATAGGACCCTaGAGGTCTCAGGGCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QSCVQGPGWPKQDRCPSRSQIGP*RSQGRR Trigger: TCTCCTGCCCTGAGACCTGCAGGGTCCTATTTGACT...CCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR GCA 90 bp | TTTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAACTTGGCTCTGCCCGGTaGAGAGGCCGCTGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: FLLPWSLSKLCARTGVAQLGSAR*RGRCCQ Trigger: CTGGCAGCAGCGGCCTCTGCACCGGGCAGAGCCAAG...TTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR GCA 90 bp | TTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCACCCTTTCTCCCAGGCTaGCTGGGTCCCCCATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLPWSLSKLCARTGVAQAPFLPG*LGPPLR Trigger: CCTCAATGGGGGACCCAGGCAGCCTGGGAGAAAGGG...TGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR GCA 90 bp | CATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGAGGGTGCTCTCTGGAGTaGCAGCCTTGTCCAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: HGVCQSCVQGPGWPKQDRGCSLE*QPCPEW Trigger: CCACTCTGGACAAGGCTGGCACTCCAGAGAGCACCC...TCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR GCA 90 bp | TTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAAGCTCGTCCTCCGTCTaGGCTCGGTATCTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLPWSLSKLCARTGVAQASSSSV*ARYLAR Trigger: CCTGGCCAGATACCGAGCGCAGACGGAGGACGAGCT...TGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
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| CDS-3UTR GCA 90 bp | TTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGCCTCCGGAATCTCCTaGACCAGGCGCTTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LLPWSLSKLCARTGVAQAASGIS*TRRLGK Trigger: CTTCCCCAAGCGCCTGGTGCAGGAGATTCCGGAGGC...TGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | TTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCAGTGCCAGCTCATCTaGGGCCTCGGGTTGGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: FVKVVCKDRGGPSRIDVPQCQLI*GLGLVV Trigger: GACTACCAACCCGAGGCCCCAGATGAGCTGGCACTG...AGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | GAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCAGTGCCAGCTCATCTaGGGCCTCGGGTTGGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: EFVKVVCKDRGGPSRIDVQCQLI*GLGLVV Trigger: GACTACCAACCCGAGGCCCCAGATGAGCTGGCACTG...GACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR TCA 90 bp | CATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATTCCTCTGCATCATCTaGACCTCCGGCGACAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HGVCQSCVQGPGWPKQDRFLCII*TSGDRS Trigger: GCTCCTGTCGCCGGAGGTTCAGATGATGCAGAGGAA...TCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR GCA 90 bp | TTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCCCTTTCTCCCAGGCTaGCTGGGTCCCCCATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: FYFHGVCQSCVQGPGWPKPFLPG*LGPPLR Trigger: CCTCAATGGGGGACCCAGGCAGCCTGGGAGAAAGGG...CTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | TTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTAGCCGGGATCGTCTCTaGGGCAAGGACCTTATCTGG | + |
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Preference number: 4 (lower is better) Translates to: FVKVVCKDRGGPSRIDVPSRDRL*GKDLIW Trigger: CCAGATAAGGTCCTTGCCCCAGAGACGATCCCGGCT...AGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | ACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGCGGGGTCCTTTGGAATaGAGACTTTGTCAGGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: TSMEFVKVVCKDRGGPSRRGPLE*RLCQEP Trigger: CGGCTCCTGACAAAGTCTCCATTCCAAAGGACCCCG...CCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | GGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTGGGGCAGTGTCCTCATaGAGGGCCATCTTCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: GVCQSCVQGPGWPKQDRCGAVSS*RAIFRS Trigger: TGACCTGAAGATGGCCCTCCATGAGGACACTGCCCC...ACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | TGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAATTGGCCTCCTCCATaGCAGACACATCCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: CQSCVQGPGWPKQDRCPSNWPPP*QTHPQP Trigger: AGGCTGAGGATGTGTCTGCCATGGAGGAGGCCAATT...GGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | GGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTGTGGGGGCTGACTCTTaGGGAAGCACCTGCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GVCQSCVQGPGWPKQDRCVGADS*GSTCFW Trigger: CCAAAAGCAGGTGCTTCCCCAAGAGTCAGCCCCCAC...ACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR TCA 90 bp | GGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTGTCTCCACTGGGTGTTaGAAGTGTCTTGGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GVCQSCVQGPGWPKQDRCVSTGC*KCLGSA Trigger: GGCAGAGCCAAGACACTTTCAACACCCAGTGGAGAC...ACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR TCA 90 bp | ACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGGCTCTGGGCTGTAGTTaGAGTTCACTCTGCACCATC | + |
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Preference number: 4 (lower is better) Translates to: TSMEFVKVVCKDRGGPSRALGCS*SSLCTI Trigger: GATGGTGCAGAGTGAACTTCAACTACAGCCCAGAGC...CCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
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| CDS-3UTR GCA 90 bp | TCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAAAGCGTCAGCTCGTCTaGCTGCTCTGGGCTGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: SMEFVKVVCKDRGGPSRIKRQLV*LLWAVV Trigger: AACTACAGCCCAGAGCAGGCAGACGAGCTGACGCTT...TATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | GAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCGGAGGGGCCCTTTCCTaGGCTTTTCTGTTCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: EFVKVVCKDRGGPSRIDVGGALS*AFLFIL Trigger: GAGGATGAACAGAAAAGCCCAGGAAAGGGCCCCTCC...GACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | CATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGAGGAGGGGCCCTTTCCTaGGCTTTTCTGTTCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: HGVCQSCVQGPGWPKQDRGGALS*AFLFIL Trigger: GAGGATGAACAGAAAAGCCCAGGAAAGGGCCCCTCC...TCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | TTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAAGCCGGGATCGTCTCTaGGGCAAGGACCTTATCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLPWSLSKLCARTGVAQASRDRL*GKDLIW Trigger: CCAGATAAGGTCCTTGCCCCAGAGACGATCCCGGCT...TGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | TTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGGGCAGTGTCCTCATaGAGGGCCATCTTCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LLPWSLSKLCARTGVAQAGAVSS*RAIFRS Trigger: TGACCTGAAGATGGCCCTCCATGAGGACACTGCCCC...TGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | TTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCACACATCCTCAGCCTTaGACTGGGCTGGGAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: FTSMEFVKVVCKDRGGPSTHPQP*TGLGRS Trigger: GCTCCTTCCCAGCCCAGTCCAAGGCTGAGGATGTGT...GCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR CCA 90 bp | TTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGTGGGGGCTGACTCTTaGGGAAGCACCTGCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LLPWSLSKLCARTGVAQAVGADS*GSTCFW Trigger: CCAAAAGCAGGTGCTTCCCCAAGAGTCAGCCCCCAC...TGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS-3UTR TCA 90 bp | TTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCGTCTCCACTGGGTGTTaGAAGTGTCTTGGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FTSMEFVKVVCKDRGGPSVSTGC*KCLGSA Trigger: GGCAGAGCCAAGACACTTTCAACACCCAGTGGAGAC...GCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR GCA 90 bp | CATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGAAGTCAAATAGGACCCTaGAGGTCTCAGGGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HGVCQSCVQGPGWPKQDRSQIGP*RSQGRR Trigger: TCTCCTGCCCTGAGACCTGCAGGGTCCTATTTGACT...TCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR GCA 90 bp | TTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCATGCAGAGGCCGCTGCTaGCAGCTTCTTTACAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPWSLSKLCARTGVAQACRGRC*QLLYSR Trigger: CCTACTGTAAAGAAGCTGGCAGCAGCGGCCTCTGCA...TGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR GCA 90 bp | TCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATATATTCCCAGAAAGGGTaGTCTCTGGAGTGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SMEFVKVVCKDRGGPSRIYSQKG*SLECQP Trigger: AGGCTGGCACTCCAGAGAGCACCCTTTCTGGGAATA...TATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR GCA 90 bp | GAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCTCAGGGACTGGCATCTaGTGGATAGTGTGTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: EFVKVVCKDRGGPSRIDVSGTGI*WIVCGT Trigger: AGTGCCACACACTATCCAGCAGATGCCAGTCCCTGA...GACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCTCGTCTGCCTGCTCTaGGCTGTAGTTGAAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVKVVCKDRGGPSRIDVPLVCLL*AVVEVH Trigger: GTGAACTTCAACTACAGCCCAGAGCAGGCAGACGAG...AGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATCAGCTTCCTGATTaGGGGCGGTGGGATGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SMEFVKVVCKDRGGPSRIDQLPD*GRWDDK Trigger: TTTGTCATCCCACCGCCCCCAATCAGGAAGCTGATC...TATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGTGTTGAAAGTGTCTTaGCTCTGCCCGGTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPWSLSKLCARTGVAQAVLKVS*LCPVQR Trigger: CCTCTGCACCGGGCAGAGCCAAGACACTTTCAACAC...TGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCGGCTTCATCCTTAGCTaGCTTATTCCCAGAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CQSCVQGPGWPKQDRCPSGFILS*LIPRKG Trigger: ACCCTTTCTGGGAATAAGCCAGCTAAGGATGAAGCC...GGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGATAGTGTGTGGCACTTaGGGGGTGGGGGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FYFHGVCQSCVQGPGWPKIVCGT*GVGADS Trigger: AGAGTCAGCCCCCACCCCCCAAGTGCCACACACTAT...CTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTTTCCACAAAGTTGGATaGGAAGGCTCCCAACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FVKVVCKDRGGPSRIDVPFHKVG*EGSQLP Trigger: GGGCAGTTGGGAGCCTTCCCATCCAACTTTGTGGAA...AGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS-3UTR TCA 90 bp | GAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCTTCTGTTCATCCTCCTaGCTGGATGCAGAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EFVKVVCKDRGGPSRIDVFCSSS*LDAECC Trigger: ACAGCACTCTGCATCCAGTCAGGAGGATGAACAGAA...GACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR GCA 90 bp | TTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGAAGCGTCAGCTCGTCTaGCTGCTCTGGGCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FYFHGVCQSCVQGPGWPKKRQLV*LLWAVV Trigger: AACTACAGCCCAGAGCAGGCAGACGAGCTGACGCTT...CTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCTGCTGTTGGGAAGCCTaGGTTCTGGATCCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTSMEFVKVVCKDRGGPSCCWEA*VLDPFL Trigger: GAGAAAGGGATCCAGAACCCAGGCTTCCCAACAGCA...GCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCATGCTGTTGGGAAGCCTaGGTTCTGGATCCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLPWSLSKLCARTGVAQACCWEA*VLDPFL Trigger: GAGAAAGGGATCCAGAACCCAGGCTTCCCAACAGCA...TGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | CATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGGAACGGGGTCCTTTaGAATGGAGACTTTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGVCQSCVQGPGWPKQDRWNGVL*NGDFVR Trigger: CCTGACAAAGTCTCCATTCCAAAGGACCCCGTTCCA...TCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCAGAAGGCAGCTTTTTaGGGAGTGCCTTGTTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FVKVVCKDRGGPSRIDVPQKAAF*GVPCLG Trigger: CCCTAAACAAGGCACTCCCCAAAAAGCTGCCTTCTG...AGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGGTCATTCTTGCTCTTaGGAGAGGTTAGTGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SMEFVKVVCKDRGGPSRIGHSCS*ERLVGS Trigger: TGACCCCACTAACCTCTCCCAAGAGCAAGAATGACC...TATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | GAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCGGTCATTCTTGCTCTTaGGAGAGGTTAGTGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EFVKVVCKDRGGPSRIDVGHSCS*ERLVGS Trigger: TGACCCCACTAACCTCTCCCAAGAGCAAGAATGACC...GACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR GCA 90 bp | TTTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAATGCAGAGGCCGCTGCTaGCAGCTTCTTTACAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLPWSLSKLCARTGVAQCRGRC*QLLYSR Trigger: CCTACTGTAAAGAAGCTGGCAGCAGCGGCCTCTGCA...TTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAACGGGGTCCTTTGGAATaGAGACTTTGTCAGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FLLPWSLSKLCARTGVAQRGPLE*RLCQEP Trigger: CGGCTCCTGACAAAGTCTCCATTCCAAAGGACCCCG...TTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCATGGAACGGGGTCCTTTaGAATGGAGACTTTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPWSLSKLCARTGVAQAWNGVL*NGDFVR Trigger: CCTGACAAAGTCTCCATTCCAAAGGACCCCGTTCCA...TGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGGCTTCATCCTTAGCTaGCTTATTCCCAGAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMEFVKVVCKDRGGPSRIGFILS*LIPRKG Trigger: ACCCTTTCTGGGAATAAGCCAGCTAAGGATGAAGCC...TATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGAATTGGCCTCCTCCATaGCAGACACATCCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FYFHGVCQSCVQGPGWPKNWPPP*QTHPQP Trigger: AGGCTGAGGATGTGTCTGCCATGGAGGAGGCCAATT...CTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGGAAGCACCTGCTTTTaGGGACCCGCCCTTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLLPWSLSKLCARTGVAQGSTCF*GPALSE Trigger: TTCTGAAAGGGCGGGTCCCCAAAAGCAGGTGCTTCC...TTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR TCA 90 bp | TTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGTTGGGGGCGGTGGGATaGCAAAGTTGTCAGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FYFHGVCQSCVQGPGWPKLGAVG*QSCQEK Trigger: TTTTTCCTGACAACTTTGTCATCCCACCGCCCCCAA...CTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR GCA 90 bp | TTTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAATCAGGGACTGGCATCTaGTGGATAGTGTGTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FLLPWSLSKLCARTGVAQSGTGI*WIVCGT Trigger: AGTGCCACACACTATCCAGCAGATGCCAGTCCCTGA...TTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAACTCGTCTGCCTGCTCTaGGCTGTAGTTGAAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLLPWSLSKLCARTGVAQLVCLL*AVVEVH Trigger: GTGAACTTCAACTACAGCCCAGAGCAGGCAGACGAG...TTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGAAGGCAGCTTTTTaGGGAGTGCCTTGTTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FYFHGVCQSCVQGPGWPKQKAAF*GVPCLG Trigger: CCCTAAACAAGGCACTCCCCAAAAAGCTGCCTTCTG...CTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CCA 90 bp | TTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGCAATTCCACAAAGTTaGATGGGAAGGCTCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLPWSLSKLCARTGVAQAAIPQS*MGRLPT Trigger: AGTTGGGAGCCTTCCCATCCAACTTTGTGGAATTGC...TGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS TCA 90 bp | TGGGGTGACGGCGACTACGGCGCGGAAAGCGCGGTCTGGACTCGGTaGCGCCCCGCAGGGCCTCCGGAATCTCCTGCACCAGGCGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WGDGDYGAESAVWTR*RPAGPPESPAPGAW Trigger: CCAAGCGCCTGGTGCAGGAGATTCCGGAGGCCCTGCGGGGCGTCACCGAGTCCAGACCGCGCTTTCCGCGCCGTAGTCGCCGTCACCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS TCA 90 bp | GCCAGAGTTCCGGGAGGGGCGTTTCTGGCTGTCTCCACTGGGTGTTaGAAGTGTCTTGGCTCTGCCCGGTGCAGAGGCCGCTGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARVPGGAFLAVSTGC*KCLGSARCRGRCCQ Trigger: CTGGCAGCAGCGGCCTCTGCACCGGGCAGAGCCAAGACACTTTCAACACCCAGTGGAGACAGCCAGAAACGCCCCTCCCGGAACTCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | TGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCTCCTGCACCAGGCGCTaGGGGAAGCGACCGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CQSCVQGPGWPKQDRCPSSCTRR*GKRPRR Trigger: CCGCCGCGGTCGCTTCCCCAAGCGCCTGGTGCAGGA...GGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS TCA 90 bp | AAGTTCACTCTGCACCATCTTTGGGGGTCCCGAGAGTTGATGGGGTaGCGGCGACTACGGCGCGGAAAGCGCGGTCTGGACTCGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: KFTLHHLWGSRELMG*RRLRRGKRGLDSVT Trigger: CGTCACCGAGTCCAGACCGCGCTTTCCGCGCCGTAGTCGCCGTCACCCCATCAACTCTCGGGACCCCCAAAGATGGTGCAGAGTGAACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS GCA 90 bp | GTGCCAGCTCATCTGGGGCCTCGGGTTGGTAGTCAAATAGGACCCTaGAGGTCTCAGGGCAGGAGACTGTCCGCAGGTAGTCTGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPAHLGPRVGSQIGP*RSQGRRLSAGSLEG Trigger: GCCCTCCAGACTACCTGCGGACAGTCTCCTGCCCTGAGACCTGCAGGGTCCTATTTGACTACCAACCCGAGGCCCCAGATGAGCTGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | GACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGGACACATCCTCAGCCTaGGACTGGGCTGGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DRGGPSRIDVPPGWVEVRDTSSA*DWAGKE Trigger: CTCCTTCCCAGCCCAGTCCAAGGCTGAGGATGTGTC...CCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | GACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGGGATGCAGAGTGCTGTaGGGAAGCCTGGGTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DRGGPSRIDVPPGWVEVRGCRVL*GSLGSG Trigger: TCCAGAACCCAGGCTTCCCAACAGCACTCTGCATCC...CCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | GGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGCCTGAATGCCTGGGTCCCCCATaGAGGCAGCTGCCATTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGPSRIDVPPGWVEVRPECLGPP*RQLPLK Trigger: CTTCAATGGCAGCTGCCTCAATGGGGGACCCAGGCA...TTCAGGCCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | CAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGGACACATCCTCAGCCTaGGACTGGGCTGGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSCVQGPGWPKQDRCPSRDTSSA*DWAGKE Trigger: CTCCTTCCCAGCCCAGTCCAAGGCTGAGGATGTGTC...CCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | CAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGAGGCAGCTGCCATaGAAGCCAGAGTTCCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSCVQGPGWPKQDRCPSRLRQLP*KPEFRE Trigger: CTCCCGGAACTCTGGCTTCAATGGCAGCTGCCTCAA...CCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | TGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCGGATGCAGAGTGCTGTaGGGAAGCCTGGGTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CQSCVQGPGWPKQDRCPSGCRVL*GSLGSG Trigger: TCCAGAACCCAGGCTTCCCAACAGCACTCTGCATCC...GGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS CCA 90 bp | TATTTCCAAGGCTTGGGGGCCCACTGTCCAGCAATTCCACAAAGTTaGATGGGAAGGCTCCCAACTGCCCGTTCTTCTCTCCCAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: YFQGLGAHCPAIPQS*MGRLPTARSSLPAT Trigger: GGTGGCTGGGAGAGAAGAACGGGCAGTTGGGAGCCTTCCCATCCAACTTTGTGGAATTGCTGGACAGTGGGCCCCCAAGCCTTGGAAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | GGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGCCTGAAAACTCCTCTTCTGCCTaGGCATTCTCCTTCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GGPSRIDVPPGWVEVRPENSSSA*AFSFPP Trigger: TGGTGGGAAGGAGAATGCCAAGGCAGAAGAGGAGTT...TTCAGGCCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | CAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCAGGAACTCCTCTTCTGCCTaGGCATTCTCCTTCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QSCVQGPGWPKQDRCPSRNSSSA*AFSFPP Trigger: TGGTGGGAAGGAGAATGCCAAGGCAGAAGAGGAGTT...CCTGGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | GGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGCCTGAATTTGGAATGGAGACTTaGTCAGGAGCCGGGATCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGPSRIDVPPGWVEVRPEFGMET*SGAGIV Trigger: GACGATCCCGGCTCCTGACAAAGTCTCCATTCCAAA...TTCAGGCCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | TTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGTGCCTGGGTCCCCCATaGAGGCAGCTGCCATTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FYFHGVCQSCVQGPGWPKCLGPP*RQLPLK Trigger: CTTCAATGGCAGCTGCCTCAATGGGGGACCCAGGCA...CTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | CCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGCCTGAACCTGCTTCAGAAGGCAGCTTTTaGGGGAGTGCCTTGTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSRIDVPPGWVEVRPEPASEGSF*GSALFR Trigger: CCTAAACAAGGCACTCCCCAAAAAGCTGCCTTCTGA...AGCAGGTTCAGGCCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | CATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCTCCACTGGGTGTaGAAAGTGTCTTGGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HGVCQSCVQGPGWPKQDRCLHWV*KVSWLC Trigger: GCAGAGCCAAGACACTTTCAACACCCAGTGGAGACA...TCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | TCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATATTTGGAATGGAGACTTaGTCAGGAGCCGGGATCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SMEFVKVVCKDRGGPSRIFGMET*SGAGIV Trigger: GACGATCCCGGCTCCTGACAAAGTCTCCATTCCAAA...TATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | GGTGGCCCAAGCAGGATAGATGTCCCTCCAGGTTGGGTTGAGGTTCGGCCTGAATCTGTAGCAGGAATTTaGTCAGAATCTGGGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGPSRIDVPPGWVEVRPESVAGI*SESGAF Trigger: GAAAGCCCCAGATTCTGACAAAATTCCTGCTACAGA...TTCAGGCCGAACCTCAACCCAACCTGGAGGGACATCTATCCTGCTTGGGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | GAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCGCACCTGGATGTTATTaGAGGGTGCAGGAGACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EFVKVVCKDRGGPSRIDVAPGCY*RVQETQ Trigger: CTGAGTCTCCTGCACCCTCAAATAACATCCAGGTGC...GACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | GGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTGCACCTGGATGTTATTaGAGGGTGCAGGAGACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVCQSCVQGPGWPKQDRCAPGCY*RVQETQ Trigger: CTGAGTCTCCTGCACCCTCAAATAACATCCAGGTGC...ACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | ACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGTCAGAAGGCAGCTTTTaGGGGAGTGCCTTGTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSMEFVKVVCKDRGGPSRSEGSF*GSALFR Trigger: CCTAAACAAGGCACTCCCCAAAAAGCTGCCTTCTGA...CCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | TGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTCCTCTGTAGCAGGAATTTaGTCAGAATCTGGGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CQSCVQGPGWPKQDRCPSSVAGI*SESGAF Trigger: GAAAGCCCCAGATTCTGACAAAATTCCTGCTACAGA...GGAGGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | ACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGTTTTTGGGGAGTGCCTaGTTTAGGGTCCTCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TSMEFVKVVCKDRGGPSRFLGSA*FRVLSS Trigger: AGATGAGAGGACCCTAAACAAGGCACTCCCCAAAAA...CCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | GTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTCCCTTTTTGGGGAGTGCCTaGTTTAGGGTCCTCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: VCQSCVQGPGWPKQDRCPFLGSA*FRVLSS Trigger: AGATGAGAGGACCCTAAACAAGGCACTCCCCAAAAA...GGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | TTTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAACTGTATTTCCAAGGCTaGGGGGCCCACTGTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLLPWSLSKLCARTGVAQLYFQG*GAHCPA Trigger: TGCTGGACAGTGGGCCCCCAAGCCTTGGAAATACAG...TTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | TTTTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGAGCAATTCCACAAAGTaGGATGGGAAGGCTCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: FYFHGVCQSCVQGPGWPKSNSTK*DGKAPN Trigger: GTTGGGAGCCTTCCCATCCAACTTTGTGGAATTGCT...CTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS GCA 90 bp | TTCTTAGCAACCCCACCTCTTCCTTTAAGGATTCCAACACATCCATaGGGTCATTCTTGCTCTTGGGAGAGGTTAGTGGGGTCAAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLATPPLPLRIPTHP*GHSCSWERLVGSRD Trigger: ATCCCTTGACCCCACTAACCTCTCCCAAGAGCAAGAATGACCGCATGGATGTGTTGGAATCCTTAAAGGAAGAGGTGGGGTTGCTAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS GCA 90 bp | CTTTATCACTTCCAAAATCTCCCCAGTTTGAAGCGTCAGCTCGTCTaGCTGCTCTGGGCTGTAGTTGAAGTTCACTCTGCACCATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LYHFQNLPSLKRQLV*LLWAVVEVHSAPSL Trigger: CAAAGATGGTGCAGAGTGAACTTCAACTACAGCCCAGAGCAGGCAGACGAGCTGACGCTTCAAACTGGGGAGATTTTGGAAGTGATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | GGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAGGATAGATGTAGCCCTTATCCTCAGTaGTCTTTCTCAGAACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVCQSCVQGPGWPKQDRCSPYPQ*SFSELS Trigger: TGAAAGTTCTGAGAAAGACAACTGAGGATAAGGGCT...ACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS-3UTR CAA 90 bp | TTACTTCCATGGAGTTTGTCAAAGTTGTGTGCAAGGACCGGGGTGGCCCAAGCAAGCCCTTATCCTCAGTaGTCTTTCTCAGAACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLPWSLSKLCARTGVAQASPYPQ*SFSELS Trigger: TGAAAGTTCTGAGAAAGACAACTGAGGATAAGGGCT...TGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGACAAACTCCATGGAAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS GCA 72 bp | GACTCGGTGACGCCCCGCAGGGCCTCCGGAATCTCCTaGACCAGGCGCTTGGGGAAGCGACCGCGGCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: DSVTPRRASGIS*TRRLGKRPRRP Trigger: GGGCCGCCGCGGTCGCTTCCCCAAGCGCCTGGTGCAGGAGATTCCGGAGGCCCTGCGGGGCGTCACCGAGTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS CCA 72 bp | CCCGCAGGGCCTCCGGAATCTCCTGCACCAGGCGCTTaGGGAAGCGACCGCGGCGGCCCCGCAACTCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PAGPPESPAPGA*GSDRGGPATPQ Trigger: TTGGGGAGTTGCGGGGCCGCCGCGGTCGCTTCCCCAAGCGCCTGGTGCAGGAGATTCCGGAGGCCCTGCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS TCA 72 bp | GGCGACTACGGCGCGGAAAGCGCGGTCTGGACTCGGTaGCGCCCCGCAGGGCCTCCGGAATCTCCTGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GDYGAESAVWTR*RPAGPPESPAP Trigger: TGGTGCAGGAGATTCCGGAGGCCCTGCGGGGCGTCACCGAGTCCAGACCGCGCTTTCCGCGCCGTAGTCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS TCA 72 bp | CCGGGAGGGGCGTTTCTGGCTGTCTCCACTGGGTGTTaGAAGTGTCTTGGCTCTGCCCGGTGCAGAGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PGGAFLAVSTGC*KCLGSARCRGR Trigger: GCGGCCTCTGCACCGGGCAGAGCCAAGACACTTTCAACACCCAGTGGAGACAGCCAGAAACGCCCCTCCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS CAA 72 bp | CCAGGCTGCCTGGGTCCCCCATTGAGGCAGCTGCCATaGAAGCCAGAGTTCCGGGAGGGGCGTTTCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGCLGPPLRQLP*KPEFREGRFWL Trigger: CAGCCAGAAACGCCCCTCCCGGAACTCTGGCTTCAATGGCAGCTGCCTCAATGGGGGACCCAGGCAGCCTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS TCA 72 bp | GCCGTTCACCTGTCTCACGCGACAGCAGGACCTCTCTaGGGAGTCAGGCGGTGGGGAGTACTCTCCTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: AVHLSHATAGPL*GVRRWGVLSWH Trigger: GTGCCAGGAGAGTACTCCCCACCGCCTGACTCCTCAGAGAGGTCCTGCTGTCGCGTGAGACAGGTGAACGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS CAA 72 bp | TCCGGGAGGGGCGTTTCTGGCTGTCTCCACTGGGTGTaGAAAGTGTCTTGGCTCTGCCCGGTGCAGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SGRGVSGCLHWV*KVSWLCPVQRP Trigger: CGGCCTCTGCACCGGGCAGAGCCAAGACACTTTCAACACCCAGTGGAGACAGCCAGAAACGCCCCTCCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS TCA 72 bp | AGTTCACTCTGCACCATCTTTGGGGGTCCCGAGAGTTaGTGGGGTGACGGCGACTACGGCGCGGAAAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSLCTIFGGPES*WGDGDYGAESA Trigger: CGCGCTTTCCGCGCCGTAGTCGCCGTCACCCCATCAACTCTCGGGACCCCCAAAGATGGTGCAGAGTGAACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
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| CDS CCA 72 bp | GCCTCCTCCATGGCAGACACATCCTCAGCCTTGGACTaGGCTGGGAAGGAGCCGTTCACCTGTCTCACGCGA | + |
|
Preference number: 6 (lower is better) Translates to: ASSMADTSSALD*AGKEPFTCLTR Trigger: TCGCGTGAGACAGGTGAACGGCTCCTTCCCAGCCCAGTCCAAGGCTGAGGATGTGTCTGCCATGGAGGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS CAA 72 bp | CGTTTCTGGCTGTCTCCACTGGGTGTTGAAAGTGTCTaGGCTCTGCCCGGTGCAGAGGCCGCTGCTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RFWLSPLGVESV*ALPGAEAAAAS Trigger: GCTGGCAGCAGCGGCCTCTGCACCGGGCAGAGCCAAGACACTTTCAACACCCAGTGGAGACAGCCAGAAACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS CAA 90 bp | GTCTGCCTGCTCTGGGCTGTAGTTGAAGTTCACTCTGCACCATCTTaGGGGGTCCCGAGAGTTGATGGGGTGACGGCGACTACGGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VCLLWAVVEVHSAPS*GVPRVDGVTATTAR Trigger: CCGCGCCGTAGTCGCCGTCACCCCATCAACTCTCGGGACCCCCAAAGATGGTGCAGAGTGAACTTCAACTACAGCCCAGAGCAGGCAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS CCA 72 bp | GTTTCTGGCTGTCTCCACTGGGTGTTGAAAGTGTCTTaGCTCTGCCCGGTGCAGAGGCCGCTGCTGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSGCLHWVLKVS*LCPVQRPLLPA Trigger: AGCTGGCAGCAGCGGCCTCTGCACCGGGCAGAGCCAAGACACTTTCAACACCCAGTGGAGACAGCCAGAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS CCA 72 bp | CAGAGTTCCGGGAGGGGCGTTTCTGGCTGTCTCCACTaGGTGTTGAAAGTGTCTTGGCTCTGCCCGGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QSSGRGVSGCLH*VLKVSWLCPVQ Trigger: CTGCACCGGGCAGAGCCAAGACACTTTCAACACCCAGTGGAGACAGCCAGAAACGCCCCTCCCGGAACTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS CCA 72 bp | CTCCATGGCAGACACATCCTCAGCCTTGGACTGGGCTaGGAAGGAGCCGTTCACCTGTCTCACGCGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LHGRHILSLGLG*EGAVHLSHATA Trigger: TGCTGTCGCGTGAGACAGGTGAACGGCTCCTTCCCAGCCCAGTCCAAGGCTGAGGATGTGTCTGCCATGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS GCA 72 bp | GGCTGTCTCCACTGGGTGTTGAAAGTGTCTTGGCTCTaGCCGGTGCAGAGGCCGCTGCTGCCAGCTTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GCLHWVLKVSWL*PVQRPLLPASL Trigger: TAAAGAAGCTGGCAGCAGCGGCCTCTGCACCGGGCAGAGCCAAGACACTTTCAACACCCAGTGGAGACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS CCA 72 bp | GAGGAGTCAGGCGGTGGGGAGTACTCTCCTGGCACCTaGATGTTATTTGAGGGTGCAGGAGACTCAGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: EESGGGEYSPGT*MLFEGAGDSGL Trigger: GAGGCCTGAGTCTCCTGCACCCTCAAATAACATCCAGGTGCCAGGAGAGTACTCCCCACCGCCTGACTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS TCA 72 bp | CGGTGGGGAGTACTCTCCTGGCACCTGGATGTTATTTaGGGGTGCAGGAGACTCAGGCCTCTGTGTGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: RWGVLSWHLDVI*GCRRLRPLCGS Trigger: GGATCCACACAGAGGCCTGAGTCTCCTGCACCCTCAAATAACATCCAGGTGCCAGGAGAGTACTCCCCACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS TCA 72 bp | GAAGCGTCAGCTCGTCTGCCTGCTCTGGGCTGTAGTTaGAGTTCACTCTGCACCATCTTTGGGGGTCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: EASARLPALGCS*SSLCTIFGGPE Trigger: CTCGGGACCCCCAAAGATGGTGCAGAGTGAACTTCAACTACAGCCCAGAGCAGGCAGACGAGCTGACGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS CCA 72 bp | TGGGGGCCCACTGTCCAGCAATTCCACAAAGTTGGATaGGAAGGCTCCCAACTGCCCGTTCTTCTCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WGPTVQQFHKVG*EGSQLPVLLSQ Trigger: CTGGGAGAGAAGAACGGGCAGTTGGGAGCCTTCCCATCCAACTTTGTGGAATTGCTGGACAGTGGGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS CCA 72 bp | GGCTTGGGGGCCCACTGTCCAGCAATTCCACAAAGTTaGATGGGAAGGCTCCCAACTGCCCGTTCTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLGAHCPAIPQS*MGRLPTARSSL Trigger: GAGAGAAGAACGGGCAGTTGGGAGCCTTCCCATCCAACTTTGTGGAATTGCTGGACAGTGGGCCCCCAAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS CAA 72 bp | GCGGTGGGGAGTACTCTCCTGGCACCTGGATGTTATTaGAGGGTGCAGGAGACTCAGGCCTCTGTGTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: AVGSTLLAPGCY*RVQETQASVWI Trigger: GATCCACACAGAGGCCTGAGTCTCCTGCACCCTCAAATAACATCCAGGTGCCAGGAGAGTACTCCCCACCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS CAA 90 bp | GTATTTCCAAGGCTTGGGGGCCCACTGTCCAGCAATTCCACAAAGTaGGATGGGAAGGCTCCCAACTGCCCGTTCTTCTCTCCCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VFPRLGGPLSSNSTK*DGKAPNCPFFSPSH Trigger: GTGGCTGGGAGAGAAGAACGGGCAGTTGGGAGCCTTCCCATCCAACTTTGTGGAATTGCTGGACAGTGGGCCCCCAAGCCTTGGAAATAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS CAA 72 bp | GCTTTCTTTGGAACGGGGTCCTTTGGAATGGAGACTTaGTCAGGAGCCGGGATCGTCTCTGGGGCAAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: AFFGTGSFGMET*SGAGIVSGART Trigger: GGTCCTTGCCCCAGAGACGATCCCGGCTCCTGACAAAGTCTCCATTCCAAAGGACCCCGTTCCAAAGAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS CAA 72 bp | CTCTGGGCTGTAGTTGAAGTTCACTCTGCACCATCTTaGGGGGTCCCGAGAGTTGATGGGGTGACGGCGACT | + |
|
Preference number: 6 (lower is better) Translates to: LWAVVEVHSAPS*GVPRVDGVTAT Trigger: AGTCGCCGTCACCCCATCAACTCTCGGGACCCCCAAAGATGGTGCAGAGTGAACTTCAACTACAGCCCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS CAA 72 bp | AGGCTTGGGGGCCCACTGTCCAGCAATTCCACAAAGTaGGATGGGAAGGCTCCCAACTGCCCGTTCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RLGGPLSSNSTK*DGKAPNCPFFS Trigger: AGAGAAGAACGGGCAGTTGGGAGCCTTCCCATCCAACTTTGTGGAATTGCTGGACAGTGGGCCCCCAAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
||
| CDS CCA 72 bp | GCAGGTCTCAGGGCAGGAGACTGTCCGCAGGTAGTCTaGAGGGCTGTCATATGTCAAGTTGCTCAACTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGLRAGDCPQVV*RAVICQVAQLR Trigger: CCTAAGTTGAGCAACTTGACATATGACAGCCCTCCAGACTACCTGCGGACAGTCTCCTGCCCTGAGACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS CCA 72 bp | AATCTGGGGCTTTCTTTGGAACGGGGTCCTTTGGAATaGAGACTTTGTCAGGAGCCGGGATCGTCTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: NLGLSLERGPLE*RLCQEPGSSLG Trigger: CCCCAGAGACGATCCCGGCTCCTGACAAAGTCTCCATTCCAAAGGACCCCGTTCCAAAGAAAGCCCCAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS CCA 72 bp | GAGGGCCATCTTCAGGTCAAGGGCTTCATCCTTAGCTaGCTTATTCCCAGAAAGGGTGCTCTCTGGAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: EGHLQVKGFILS*LIPRKGALWSA Trigger: GGCACTCCAGAGAGCACCCTTTCTGGGAATAAGCCAGCTAAGGATGAAGCCCTTGACCTGAAGATGGCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
||
| CDS TCA 72 bp | TTCTTGCTCTTGGGAGAGGTTAGTGGGGTCAAGGGATaGAGTGTGGGAGCTTCTTCAGGGACTGGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: FLLLGEVSGVKG*SVGASSGTGIC Trigger: GCAGATGCCAGTCCCTGAAGAAGCTCCCACACTTCATCCCTTGACCCCACTAACCTCTCCCAAGAGCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS CCA 72 bp | CTCCCCAGTTTGAAGCGTCAGCTCGTCTGCCTGCTCTaGGCTGTAGTTGAAGTTCACTCTGCACCATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LPSLKRQLVCLL*AVVEVHSAPSL Trigger: CAAAGATGGTGCAGAGTGAACTTCAACTACAGCCCAGAGCAGGCAGACGAGCTGACGCTTCAAACTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
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| CDS CAA 72 bp | CAAGGCCTCCTTTATCACTTCCAAAATCTCCCCAGTTaGAAGCGTCAGCTCGTCTGCCTGCTCTGGGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: QGLLYHFQNLPS*KRQLVCLLWAV Trigger: TACAGCCCAGAGCAGGCAGACGAGCTGACGCTTCAAACTGGGGAGATTTTGGAAGTGATAAAGGAGGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094760.9 |
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| CDS CAA 90 bp | GGAGTGCCAGCCTTGTCCAGAGTGGTATCCTCTGTAGCAGGAATTTaGTCAGAATCTGGGGCTTTCTTTGGAACGGGGTCCTTTGGAATG | + |
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Preference number: 6 (lower is better) Translates to: GVPALSRVVSSVAGI*SESGAFFGTGSFGM Trigger: CATTCCAAAGGACCCCGTTCCAAAGAAAGCCCCAGATTCTGACAAAATTCCTGCTACAGAGGATACCACTCTGGACAAGGCTGGCACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS CAA 90 bp | CCAGCCGTCCTCAATCTCCTTTATCACTTCCAAAATCTCCCCAGTTaGAAGCGTCAGCTCGTCTGCCTGCTCTGGGCTGTAGTTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: PAVLNLLYHFQNLPS*KRQLVCLLWAVVEV Trigger: AACTTCAACTACAGCCCAGAGCAGGCAGACGAGCTGACGCTTCAAACTGGGGAGATTTTGGAAGTGATAAAGGAGATTGAGGACGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
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| CDS GCA 72 bp | TTCCAAAATCTCCCCAGTTTGAAGCGTCAGCTCGTCTaGCTGCTCTGGGCTGTAGTTGAAGTTCACTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: FQNLPSLKRQLV*LLWAVVEVHSA Trigger: TGCAGAGTGAACTTCAACTACAGCCCAGAGCAGGCAGACGAGCTGACGCTTCAAACTGGGGAGATTTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS CCA 72 bp | TGGGGTAATTGGCGGTATGTCTGTATTTCCAAGGCTTaGGGGCCCACTGTCCAGCAATTCCACAAAGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: WGNWRYVCISKA*GPTVQQFHKVG Trigger: TCCAACTTTGTGGAATTGCTGGACAGTGGGCCCCCAAGCCTTGGAAATACAGACATACCGCCAATTACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
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| CDS CAA 72 bp | GCCTTGTCCAGAGTGGTATCCTCTGTAGCAGGAATTTaGTCAGAATCTGGGGCTTTCTTTGGAACGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: ALSRVVSSVAGI*SESGAFFGTGS Trigger: GGACCCCGTTCCAAAGAAAGCCCCAGATTCTGACAAAATTCCTGCTACAGAGGATACCACTCTGGACAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094760.9 ENSMUST00000097891.4 |
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| CDS CAA 72 bp | CTCAATCTCCTTTATCACTTCCAAAATCTCCCCAGTTaGAAGCGTCAGCTCGTCTGCCTGCTCTGGGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: LNLLYHFQNLPS*KRQLVCLLWAV Trigger: TACAGCCCAGAGCAGGCAGACGAGCTGACGCTTCAAACTGGGGAGATTTTGGAAGTGATAAAGGAGATTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097891.4 |
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| CDS CAA 90 bp | CTGTATTTCCAAGGCCTCCTTTATCACTTCCAAAATCTCCCCAGTTaGAAGCGTCAGCTCGTCTGCCTGCTCTGGGCTGTAGTTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LYFQGLLYHFQNLPS*KRQLVCLLWAVVEV Trigger: AACTTCAACTACAGCCCAGAGCAGGCAGACGAGCTGACGCTTCAAACTGGGGAGATTTTGGAAGTGATAAAGGAGGCCTTGGAAATACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094760.9 |
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