Pregenerated sensors for SH3BP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054520

Ensembl transcript IDs: ENSMUST00000067638.14, ENSMUST00000101316.10, ENSMUST00000118545.8, ENSMUST00000138912.8, ENSMUST00000179943.3

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	CCTGCCCCCACACACACTGGATTCCAAGCTCCCAGATCCCCCATGTaGCTTCCCAGACCACAGCACCTCCAGCAGCACCTGATACTCACT	+
Preference number: 1 (lower is better) Translates to: PAPTHTGFQAPRSPM*LPRPQHLQQHLILT Trigger: AGTGAGTATCAGGTGCTGCTGGAGGTGCTGTGGTCTGGGAAGCCACATGGGGGATCTGGGAGCTTGGAATCCAGTGTGTGTGGGGGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR GCA 90 bp	CTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTaGTCCAGCTGGAACCCAGCCTGCTCACTGCGGCTAGGTGTCATG	+
Preference number: 1 (lower is better) Translates to: LDGPSHPATPLVVVA*SSWNPACSLRLGVM Trigger: CATGACACCTAGCCGCAGTGAGCAGGCTGGGTTCCAGCTGGAGCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 90 bp	CCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCTCCAGCTaGAACCCAGCCTGCTCACTGCGGCTAGGTGTCATGTCGATGAGG	+
Preference number: 1 (lower is better) Translates to: PSHPATPLVVVACSS*NPACSLRLGVMSMR Trigger: CCTCATCGACATGACACCTAGCCGCAGTGAGCAGGCTGGGTTCCAGCTGGAGCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 90 bp	CACCCTTCTTATGCAGGTAACCAGCCTTCGCCACACCACCAGGCATaGTCAGCAAATTCTGGGCACCAATGGCCTTCATGGGGACAGGCC	+
Preference number: 1 (lower is better) Translates to: HPSYAGNQPSPHHQA*SANSGHQWPSWGQA Trigger: GGCCTGTCCCCATGAAGGCCATTGGTGCCCAGAATTTGCTGACCATGCCTGGTGGTGTGGCGAAGGCTGGTTACCTGCATAAGAAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
3UTR GCA 90 bp	GTCAGCAAATTCTGGGCACCAATGGCCTTCATGGGGACAGGCCACTaGATCTCCTCAGCCGCCATGAAGAAGATCTCACAAGCTCTTCCC	+
Preference number: 1 (lower is better) Translates to: VSKFWAPMAFMGTGH*ISSAAMKKISQALP Trigger: GGGAAGAGCTTGTGAGATCTTCTTCATGGCGGCTGAGGAGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTGCCCAGAATTTGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
3UTR CCA 90 bp	GCCCCAGTACCAGGCCAGTTACATAGTCGCTCAATAATTGCTAATTaGGGCTTTCAAATTGAGGCTCCAGCCAAGATTGACAGATCCAGG	+
Preference number: 1 (lower is better) Translates to: APVPGQLHSRSIIAN*GFQIEAPAKIDRSR Trigger: CCTGGATCTGTCAATCTTGGCTGGAGCCTCAATTTGAAAGCCCCAATTAGCAATTATTGAGCGACTATGTAACTGGCCTGGTACTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR TCA 90 bp	CCAATCAAACCCTGGTCATTGAGACAAAGGTCATCTCTGATTTATTaGGAGGCAATGGTCCCTCCTAGAGCATTCCTATGTCTTAGCATT	+
Preference number: 1 (lower is better) Translates to: PIKPWSLRQRSSLIY*EAMVPPRAFLCLSI Trigger: AATGCTAAGACATAGGAATGCTCTAGGAGGGACCATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR GCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCCTGTGGCTCCGGGGCTaGTTCCACCCAACAGCTGTG	+
Preference number: 2 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPLWLRG*FHPTAV Trigger: CACAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAG...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	CGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGTTTGTGGCAGAGCTGTaGCTCCGGGGCTGCTTCCAC	+
Preference number: 2 (lower is better) Translates to: RLCQGCGLDQLGSPNYLGFVAEL*LRGCFH Trigger: GTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAA...CCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCGTGGCCTGCTCCAGCTaGAACCCAGCCTGCTCACTG	+
Preference number: 2 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPVACSS*NPACSL Trigger: CAGTGAGCAGGCTGGGTTCCAGCTGGAGCAGGCCAC...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR GCA 90 bp	GCCTTCGCCACACCACCAGGCATGGTCAGCAAATTCTGGGCACCAATGGCCTTCATGGGGACAGGCCACTaGATCTCCTCAGCCGCCATG	+
Preference number: 2 (lower is better) Translates to: AFATPPGMVSKFWAPMAFMGTGH*ISSAAM Trigger: CATGGCGGCTGAGGAGATGCAGTGGCCTGTCCCCAT...GAAGGCCATTGGTGCCCAGAATTTGCTGACCATGCCTGGTGGTGTGGCGAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
3UTR-3UTR GCA 90 bp	CGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGCAAGTAACCCAGCCTTaGTTGGTCCCAGCCCACTAC	+
Preference number: 2 (lower is better) Translates to: RLCQGCGLDQLGSPNYLGQVTQP*LVPAHY Trigger: GTAGTGGGCTGGGACCAAGCAAGGCTGGGTTACTTG...CCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR GCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCACAAGTAACCCAGCCTTaGTTGGTCCCAGCCCACTAC	+
Preference number: 2 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPQVTQP*LVPAHY Trigger: GTAGTGGGCTGGGACCAAGCAAGGCTGGGTTACTTG...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGTTTGTGGCAGAGCTGTaGCTCCGGGGCTGCTTCCAC	+
Preference number: 2 (lower is better) Translates to: QKKSSLDGCARGVAWTNWFVAEL*LRGCFH Trigger: GTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAA...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR TCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCGGCTCCAGCCAAGATTaGCAGATCCAGGTGGATCCT	+
Preference number: 2 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPGSSQD*QIQVDP Trigger: AGGATCCACCTGGATCTGTCAATCTTGGCTGGAGCC...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR GCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCAGTGCTCAGTAGAGCCTaGTACCCACTCTGTGCCAAT	+
Preference number: 2 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPVLSRA*YPLCAN Trigger: ATTGGCACAGAGTGGGTAGCAGGCTCTACTGAGCAC...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR GCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCCCTGGACATTGGTGGTaGTCAGTAGAGCCTGCTACC	+
Preference number: 2 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPPGHWW*SVEPAT Trigger: GGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGG...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	GAATGGCTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCTTTGTGGCAGAGCTGTaGCTCCGGGGCTGCTTCCAC	+
Preference number: 2 (lower is better) Translates to: EWLDGPSHPATPLVVVACFVAEL*LRGCFH Trigger: GTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAA...GCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR GCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGTGCTCAGTAGAGCCTaGTACCCACTCTGTGCCAAT	+
Preference number: 2 (lower is better) Translates to: QKKSSLDGCARGVAWTNWVLSRA*YPLCAN Trigger: ATTGGCACAGAGTGGGTAGCAGGCTCTACTGAGCAC...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGTTGAGAGATGGGTCATaGAATGGCTGGATGGGCCAA	+
Preference number: 2 (lower is better) Translates to: DGCARGVAWTNWDHQTTWLRDGS*NGWMGQ Trigger: TTGGCCCATCCAGCCATTCCATGACCCATCTCTCAA...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCTCTCTACCTGGACATTaGTGGTGCTCAGTAGAGCCT	+
Preference number: 2 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPSLPGH*WCSVEP Trigger: AGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGA...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGTGTAAGAAGTCTTACTaGAACCTCCCCGACCTCCCA	+
Preference number: 2 (lower is better) Translates to: DGCARGVAWTNWDHQTTWCKKSY*NLPDLP Trigger: TGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACA...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	TATGCAGGTAACCAGCCTTCGCCACACCACCAGGCATGGTCAGCAAATTCTGGGCACCAATGGCCTTCATaGGGACAGGCCACTGCATCT	+
Preference number: 2 (lower is better) Translates to: YAGNQPSPHHQAWSANSGHQWPS*GQATAS Trigger: AGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTG...CCCAGAATTTGCTGACCATGCCTGGTGGTGTGGCGAAGGCTGGTTACCTGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
3UTR-3UTR TCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGCATGTCGATGAGGTCTaGTGTCAAGCCCATTCCTGT	+
Preference number: 2 (lower is better) Translates to: QKKSSLDGCARGVAWTNWHVDEV*CQAHSC Trigger: ACAGGAATGGGCTTGACATCAGACCTCATCGACATG...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCGTCTTAGCATTCCTATaGGTCCTAGGACAAGGCTTC	+
Preference number: 2 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPVLAFL*VLGQGF Trigger: GAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGAC...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGTGTAAGAAGTCTTACTaGAACCTCCCCGACCTCCCA	+
Preference number: 2 (lower is better) Translates to: QKKSSLDGCARGVAWTNWCKKSY*NLPDLP Trigger: TGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACA...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR TCA 90 bp	CGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGGACAAAGGTCATCTCTaGTTTATTGAGAGGCAATGG	+
Preference number: 2 (lower is better) Translates to: RLCQGCGLDQLGSPNYLGDKGHL*FIERQW Trigger: CCATTGCCTCTCAATAAATCAGAGATGACCTTTGTC...CCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGTGCCAATCAAACCCTaGTCATTGAGACAAAGGTCA	+
Preference number: 2 (lower is better) Translates to: DGCARGVAWTNWDHQTTWVPIKP*SLRQRS Trigger: TGACCTTTGTCTCAATGACCAGGGTTTGATTGGCAC...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR GCA 90 bp	AGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCAAGTACTGTGGCTCCGGGGCTaGTTCCACCCAACAGCTGTG	+
Preference number: 2 (lower is better) Translates to: RAFLCLSIPMGPRTRLQVLWLRG*FHPTAV Trigger: CACAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAG...TACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	CCTCCTAGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTTGGTCTCCATCTTTGTaGCAGAGCTGTGGCTCCGGG	+
Preference number: 2 (lower is better) Translates to: PPRAFLCLSIPMGPRTRLWSPSL*QSCGSG Trigger: CCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCA...AAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR TCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGACAAAGGTCATCTCTaGTTTATTGAGAGGCAATGG	+
Preference number: 2 (lower is better) Translates to: QKKSSLDGCARGVAWTNWDKGHL*FIERQW Trigger: CCATTGCCTCTCAATAAATCAGAGATGACCTTTGTC...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR GCA 90 bp	CCTCCTAGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCAAGTAACCCAGCCTTaGTTGGTCCCAGCCCACTAC	+
Preference number: 2 (lower is better) Translates to: PPRAFLCLSIPMGPRTRLQVTQP*LVPAHY Trigger: GTAGTGGGCTGGGACCAAGCAAGGCTGGGTTACTTG...AAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGATTGACAGATCCAGGTaGATCCTGATCCATTATTTA	+
Preference number: 2 (lower is better) Translates to: DGCARGVAWTNWDHQTTWIDRSR*ILIHYL Trigger: TAAATAATGGATCAGGATCCACCTGGATCTGTCAAT...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGATTGACAGATCCAGGTaGATCCTGATCCATTATTTA	+
Preference number: 2 (lower is better) Translates to: QKKSSLDGCARGVAWTNWIDRSR*ILIHYL Trigger: TAAATAATGGATCAGGATCCACCTGGATCTGTCAAT...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	AATCAAACCCTGGTCATTGAGACAAAGGTCATCTCTGATTTATTGAGAGGCAATTTTGTGGCAGAGCTGTaGCTCCGGGGCTGCTTCCAC	+
Preference number: 2 (lower is better) Translates to: NQTLVIETKVISDLLRGNFVAEL*LRGCFH Trigger: GTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAA...ATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTTTGAGAGATGGGTCATaGAATGGCTGGATGGGCCAA	+
Preference number: 2 (lower is better) Translates to: NTKDHTLGLLSVALYLDILRDGS*NGWMGQ Trigger: TTGGCCCATCCAGCCATTCCATGACCCATCTCTCAA...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	AGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCAAGTATTGAGAGATGGGTCATaGAATGGCTGGATGGGCCAA	+
Preference number: 2 (lower is better) Translates to: RAFLCLSIPMGPRTRLQVLRDGS*NGWMGQ Trigger: TTGGCCCATCCAGCCATTCCATGACCCATCTCTCAA...TACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTGTCTTAGCATTCCTATaGGTCCTAGGACAAGGCTTC	+
Preference number: 2 (lower is better) Translates to: NTKDHTLGLLSVALYLDIVLAFL*VLGQGF Trigger: GAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGAC...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCTCTCTACCTGGACATTaGTGGTGCTCAGTAGAGCCT	+
Preference number: 2 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSSLPGH*WCSVEP Trigger: AGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGA...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCGTGGCCTGGACCAATTaGGATCACCAAACTACTTGG	+
Preference number: 2 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSVAWTN*DHQTTW Trigger: CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCAC...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR TCA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTGACAAAGGTCATCTCTaGTTTATTGAGAGGCAATGG	+
Preference number: 2 (lower is better) Translates to: NTKDHTLGLLSVALYLDIDKGHL*FIERQW Trigger: CCATTGCCTCTCAATAAATCAGAGATGACCTTTGTC...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CCA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCTCAATAATTGCTAATTaGGGCTTTCAAATTGAGGCT	+
Preference number: 2 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSSIIAN*GFQIEA Trigger: AGCCTCAATTTGAAAGCCCCAATTAGCAATTATTGA...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 72 bp	GCCTTCGCCACACCACCAGGCATGGTCAGCAAATTCTaGGCACCAATGGCCTTCATGGGGACAGGCCACTGC	+
Preference number: 3 (lower is better) Translates to: AFATPPGMVSKF*APMAFMGTGHC Trigger: GCAGTGGCCTGTCCCCATGAAGGCCATTGGTGCCCAGAATTTGCTGACCATGCCTGGTGGTGTGGCGAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
3UTR-3UTR CAA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCAGTAACCCAGCCTTGCTaGGTCCCAGCCCACTACAGA	+
Preference number: 3 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPVTQPC*VPAHYR Trigger: TCTGTAGTGGGCTGGGACCAAGCAAGGCTGGGTTAC...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 72 bp	CCAGCCACTCCTTTAGTAGTTGTGGCCTGCTCCAGCTaGAACCCAGCCTGCTCACTGCGGCTAGGTGTCATG	+
Preference number: 3 (lower is better) Translates to: PATPLVVVACSS*NPACSLRLGVM Trigger: CATGACACCTAGCCGCAGTGAGCAGGCTGGGTTCCAGCTGGAGCAGGCCACAACTACTAAAGGAGTGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 72 bp	CTTCACTCTGGCCAGGTCATCTGTAAGAAGTCTTACTaGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCC	+
Preference number: 3 (lower is better) Translates to: LHSGQVICKKSY*NLPDLPPLPCP Trigger: GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGATGACCTGGCCAGAGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 72 bp	CTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTaGGATCACCAAACTACTTGGGGGTACGTGGATGCC	+
Preference number: 3 (lower is better) Translates to: LDGCARGVAWTN*DHQTTWGYVDA Trigger: GGCATCCACGTACCCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CAA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCAGCTGGTCTCCATCTTaGTGGCAGAGCTGTGGCTCC	+
Preference number: 3 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPSWSPS*WQSCGS Trigger: GGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCT...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CAA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGAGCTGGTCTCCATCTTaGTGGCAGAGCTGTGGCTCC	+
Preference number: 3 (lower is better) Translates to: DGCARGVAWTNWDHQTTWSWSPS*WQSCGS Trigger: GGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCT...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CAA 90 bp	CTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCCACTCTGTGCCAGCTGGTCTCCATCTTaGTGGCAGAGCTGTGGCTCC	+
Preference number: 3 (lower is better) Translates to: LSTWTLVVLSRACYPLCASWSPS*WQSCGS Trigger: GGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCT...GGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CAA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCCTCTCTACCTGGACATaGGTGGTGCTCAGTAGAGCC	+
Preference number: 3 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPLSTWT*VVLSRA Trigger: GGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 72 bp	CTGTTCATCTTCCCATGCAGCTGGTCTCCATCTTTGTaGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAA	+
Preference number: 3 (lower is better) Translates to: LFIFPCSWSPSL*QSCGSGAASTQ Trigger: TTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGCATGGGAAGATGAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 72 bp	GGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTaGGGGTACGTGGATGCCACTGTCCCCACCCATCCT	+
Preference number: 3 (lower is better) Translates to: GVAWTNWDHQTT*GYVDATVPTHP Trigger: AGGATGGGTGGGGACAGTGGCATCCACGTACCCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CAA 90 bp	GCTCTCAGTAGCTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCGTAACCCAGCCTTGCTaGGTCCCAGCCCACTACAGA	+
Preference number: 3 (lower is better) Translates to: ALSSSLPGHWWCSVEPATVTQPC*VPAHYR Trigger: TCTGTAGTGGGCTGGGACCAAGCAAGGCTGGGTTAC...GGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAGCTACTGAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 72 bp	AAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTaGACCAATTGGGATCACCAAACTACTTGGGGGTAC	+
Preference number: 3 (lower is better) Translates to: KSSLDGCARGVA*TNWDHQTTWGY Trigger: GTACCCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CAA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCACCAGACCTGGGTTCTaGAGAGATGGGTCATGGAAT	+
Preference number: 3 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPTRPGF*RDGSWN Trigger: ATTCCATGACCCATCTCTCAAGAACCCAGGTCTGGT...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR TCA 72 bp	TGTGGCTTCCCAGACCACAGCACCTCCAGCAGCACCTaGTACTCACTGACCTGCTCTAGAGTAAGCTTGACC	+
Preference number: 3 (lower is better) Translates to: CGFPDHSTSSST*YSLTCSRVSLT Trigger: GGTCAAGCTTACTCTAGAGCAGGTCAGTGAGTATCAGGTGCTGCTGGAGGTGCTGTGGTCTGGGAAGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR GCA 72 bp	TTCTGGGCACCAATGGCCTTCATGGGGACAGGCCACTaGATCTCCTCAGCCGCCATGAAGAAGATCTCACAA	+
Preference number: 3 (lower is better) Translates to: FWAPMAFMGTGH*ISSAAMKKISQ Trigger: TTGTGAGATCTTCTTCATGGCGGCTGAGGAGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTGCCCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
3UTR CCA 72 bp	TATGCAGGTAACCAGCCTTCGCCACACCACCAGGCATaGTCAGCAAATTCTGGGCACCAATGGCCTTCATGG	+
Preference number: 3 (lower is better) Translates to: YAGNQPSPHHQA*SANSGHQWPSW Trigger: CCATGAAGGCCATTGGTGCCCAGAATTTGCTGACCATGCCTGGTGGTGTGGCGAAGGCTGGTTACCTGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
3UTR CCA 72 bp	TTAGTCACCAGACCTGGGTTCTTGAGAGATGGGTCATaGAATGGCTGGATGGGCCAAGTCATCCAGCCACTC	+
Preference number: 3 (lower is better) Translates to: LVTRPGFLRDGS*NGWMGQVIQPL Trigger: GAGTGGCTGGATGACTTGGCCCATCCAGCCATTCCATGACCCATCTCTCAAGAACCCAGGTCTGGTGACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 72 bp	GCAGCACTTAGTCACCAGACCTGGGTTCTTGAGAGATaGGTCATGGAATGGCTGGATGGGCCAAGTCATCCA	+
Preference number: 3 (lower is better) Translates to: AALSHQTWVLER*VMEWLDGPSHP Trigger: TGGATGACTTGGCCCATCCAGCCATTCCATGACCCATCTCTCAAGAACCCAGGTCTGGTGACTAAGTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 72 bp	ATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTaGTGGTGCTCAGTAGAGCCTGCTACCCACTCTGTG	+
Preference number: 3 (lower is better) Translates to: IRAALSSSLPGH*WCSVEPATHSV Trigger: CACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CAA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGATCAAACCCTGGTCATaGAGACAAAGGTCATCTCTG	+
Preference number: 3 (lower is better) Translates to: DGCARGVAWTNWDHQTTWIKPWS*RQRSSL Trigger: CAGAGATGACCTTTGTCTCAATGACCAGGGTTTGAT...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR GCA 72 bp	ATGGGTCCTAGGACAAGGCTTCAAGTAACCCAGCCTTaGTTGGTCCCAGCCCACTACAGAGTAGGTATGCTA	+
Preference number: 3 (lower is better) Translates to: MGPRTRLQVTQP*LVPAHYRVGML Trigger: TAGCATACCTACTCTGTAGTGGGCTGGGACCAAGCAAGGCTGGGTTACTTGAAGCCTTGTCCTAGGACCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR GCA 72 bp	CTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTaGTACCCACTCTGTGCCAATCAAACCCTGGTCATT	+
Preference number: 3 (lower is better) Translates to: LSTWTLVVLSRA*YPLCANQTLVI Trigger: AATGACCAGGGTTTGATTGGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CAA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTGTAACCCAGCCTTGCTaGGTCCCAGCCCACTACAGA	+
Preference number: 3 (lower is better) Translates to: NTKDHTLGLLSVALYLDIVTQPC*VPAHYR Trigger: TCTGTAGTGGGCTGGGACCAAGCAAGGCTGGGTTAC...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CAA 90 bp	GCTCTCAGTAGCTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCATCAAACCCTGGTCATaGAGACAAAGGTCATCTCTG	+
Preference number: 3 (lower is better) Translates to: ALSSSLPGHWWCSVEPATIKPWS*RQRSSL Trigger: CAGAGATGACCTTTGTCTCAATGACCAGGGTTTGAT...GGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAGCTACTGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CAA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTTCAAGTAACCCAGCCTaGCTTGGTCCCAGCCCACTA	+
Preference number: 3 (lower is better) Translates to: NTKDHTLGLLSVALYLDISSNPA*LGPSPL Trigger: TAGTGGGCTGGGACCAAGCAAGGCTGGGTTACTTGA...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CAA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCAGCTGGTCTCCATCTTaGTGGCAGAGCTGTGGCTCC	+
Preference number: 3 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSSWSPS*WQSCGS Trigger: GGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCT...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR-3UTR CAA 90 bp	AATCAAACCCTGGTCATTGAGACAAAGGTCATCTCTGATTTATTGAGAGGCAATGTAACCCAGCCTTGCTaGGTCCCAGCCCACTACAGA	+
Preference number: 3 (lower is better) Translates to: NQTLVIETKVISDLLRGNVTQPC*VPAHYR Trigger: TCTGTAGTGGGCTGGGACCAAGCAAGGCTGGGTTAC...ATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR TCA 72 bp	GTGGATCCTGATCCATTATTTAGCTATCTCTTCCAGTaGGGTCACTCAGCAGCCTGTGCCCTGAACACTAAA	+
Preference number: 3 (lower is better) Translates to: VDPDPLFSYLFQ*GHSAACALNTK Trigger: TTTAGTGTTCAGGGCACAGGCTGCTGAGTGACCTCACTGGAAGAGATAGCTAAATAATGGATCAGGATCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR TCA 72 bp	CCCTGGTCATTGAGACAAAGGTCATCTCTGATTTATTaGGAGGCAATGGTCCCTCCTAGAGCATTCCTATGT	+
Preference number: 3 (lower is better) Translates to: PWSLRQRSSLIY*EAMVPPRAFLC Trigger: ACATAGGAATGCTCTAGGAGGGACCATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 72 bp	CCAGGCCAGTTACATAGTCGCTCAATAATTGCTAATTaGGGCTTTCAAATTGAGGCTCCAGCCAAGATTGAC	+
Preference number: 3 (lower is better) Translates to: PGQLHSRSIIAN*GFQIEAPAKID Trigger: GTCAATCTTGGCTGGAGCCTCAATTTGAAAGCCCCAATTAGCAATTATTGAGCGACTATGTAACTGGCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CCA 72 bp	CAAATTGAGGCTCCAGCCAAGATTGACAGATCCAGGTaGATCCTGATCCATTATTTAGCTATCTCTTCCAGT	+
Preference number: 3 (lower is better) Translates to: QIEAPAKIDRSR*ILIHYLAISSS Trigger: ACTGGAAGAGATAGCTAAATAATGGATCAGGATCCACCTGGATCTGTCAATCTTGGCTGGAGCCTCAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR GCA 72 bp	AGTGCAATGAAATCAGATAGTGCCAAGGTCTCTGGCTaGCCTGACCTCCAAATGAATTTATTTTCACAGAAA	+
Preference number: 3 (lower is better) Translates to: SAMKSDSAKVSG*PDLQMNLFSQK Trigger: TTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTTGGCACTATCTGATTTCATTGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAGGGTGGCAGGCACCCTaGGGCCAGGCTCTACTCGCC	+
Preference number: 4 (lower is better) Translates to: QLVSIFVAELWLRGCFHPGWQAP*GQALLA Trigger: GGCGAGTAGAGCCTGGCCTCAGGGTGCCTGCCACCC...TGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	GCAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCCGCAGCAACAGGCTCTaGTGGCTGGGCAGCACATGG	+
Preference number: 4 (lower is better) Translates to: AAGLHLCGRAVAPGLLPPRSNRL*WLGSTW Trigger: CCATGTGCTGCCCAGCCATCAGAGCCTGTTGCTGCG...GGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGGGTGGCAGGCACCCTaGGGCCAGGCTCTACTCGCC	+
Preference number: 4 (lower is better) Translates to: QKKSSLDGCARGVAWTNWGWQAP*GQALLA Trigger: GGCGAGTAGAGCCTGGCCTCAGGGTGCCTGCCACCC...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCCACTCTGTGCCGGGTGGCAGGCACCCTaGGGCCAGGCTCTACTCGCC	+
Preference number: 4 (lower is better) Translates to: LSTWTLVVLSRACYPLCAGWQAP*GQALLA Trigger: GGCGAGTAGAGCCTGGCCTCAGGGTGCCTGCCACCC...GGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	TCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTGGCCAGTGTCAGCCTGTaGGGGCTGGCGGGCCTTTTC	+
Preference number: 4 (lower is better) Translates to: SPSLWQSCGSGAASTQQLASVSL*GLAGLF Trigger: GAAAAGGCCCGCCAGCCCTCACAGGCTGACACTGGC...CAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCAGCCAGTGTCAGCCTGTaGGGGCTGGCGGGCCTTTTC	+
Preference number: 4 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPASVSL*GLAGLF Trigger: GAAAAGGCCCGCCAGCCCTCACAGGCTGACACTGGC...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	GTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTGGCATGGGCATCTTCTaGACAGGAGGCCTGGGGGCC	+
Preference number: 4 (lower is better) Translates to: VSIFVAELWLRGCFHPTAGMGIF*TGGLGA Trigger: GGCCCCCAGGCCTCCTGTGCAGAAGATGCCCATGCC...AGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GCAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCATTAGCAGGCACGGGTaGGGGCTCAGATGTGGGTGG	+
Preference number: 4 (lower is better) Translates to: AAGLHLCGRAVAPGLLPPISRHG*GLRCGW Trigger: CCACCCACATCTGAGCCCCCACCCGTGCCTGCTAAT...GGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	GCAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCGGGGATCGCTGGAGGTaGGGAAGAGGTGTGTTCTCT	+
Preference number: 4 (lower is better) Translates to: AAGLHLCGRAVAPGLLPPGDRWR*GRGVFS Trigger: AGAGAACACACCTCTTCCTCACCTCCAGCGATCCCC...GGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	GCAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCGGCCATTTGAGCAGCTaGAGTTGGGTGCCACCCTTC	+
Preference number: 4 (lower is better) Translates to: AAGLHLCGRAVAPGLLPPGHLSS*SWVPPF Trigger: GAAGGGTGGCACCCAACTGCAGCTGCTCAAATGGCC...GGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCGGCATGGGCATCTTCTaGACAGGAGGCCTGGGGGCC	+
Preference number: 4 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPGMGIF*TGGLGA Trigger: GGCCCCCAGGCCTCCTGTGCAGAAGATGCCCATGCC...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGCATGGGCATCTTCTaGACAGGAGGCCTGGGGGCC	+
Preference number: 4 (lower is better) Translates to: DGCARGVAWTNWDHQTTWGMGIF*TGGLGA Trigger: GGCCCCCAGGCCTCCTGTGCAGAAGATGCCCATGCC...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGGTGGGGGCTCAGATGTaGGTGGCCCTCGGGAAGACA	+
Preference number: 4 (lower is better) Translates to: RLCQGCGLDQLGSPNYLGVGAQM*VALGKT Trigger: TGTCTTCCCGAGGGCCACCCACATCTGAGCCCCCAC...CCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAGCACAGGTGCAAACTTaGCTGCCTCCCTCGGGGAAG	+
Preference number: 4 (lower is better) Translates to: QLVSIFVAELWLRGCFHPAQVQT*LPPSGK Trigger: CTTCCCCGAGGGAGGCAGCCAAGTTTGCACCTGTGC...TGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCACCCAGCGTAGCCGTATaGGTGCCGCAGCAACAGGCT	+
Preference number: 4 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPPSVAV*VPQQQA Trigger: AGCCTGTTGCTGCGGCACCCATACGGCTACGCTGGG...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGGCATGGGCATCTTCTaGACAGGAGGCCTGGGGGCC	+
Preference number: 4 (lower is better) Translates to: QKKSSLDGCARGVAWTNWGMGIF*TGGLGA Trigger: GGCCCCCAGGCCTCCTGTGCAGAAGATGCCCATGCC...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCAATGGGGACAGGCCACTaGATCTCCTCAGCCGCCATG	+
Preference number: 4 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPMGTGH*ISSAAM Trigger: CATGGCGGCTGAGGAGATGCAGTGGCCTGTCCCCAT...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101316.10 ENSMUST00000118545.8
CDS-3UTR CCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCAGGCAGAGCCAGTGTCTaGAAGGCCTCGCTTAGGAGG	+
Preference number: 4 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPGRASV*KASLRR Trigger: CCTCCTAAGCGAGGCCTTCCAGACACTGGCTCTGCC...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGTGGGGGCTCAGATGTaGGTGGCCCTCGGGAAGACA	+
Preference number: 4 (lower is better) Translates to: DGCARGVAWTNWDHQTTWVGAQM*VALGKT Trigger: TGTCTTCCCGAGGGCCACCCACATCTGAGCCCCCAC...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	TCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTGATTAGCAGGCACGGGTaGGGGCTCAGATGTGGGTGG	+
Preference number: 4 (lower is better) Translates to: SPSLWQSCGSGAASTQQLISRHG*GLRCGW Trigger: CCACCCACATCTGAGCCCCCACCCGTGCCTGCTAAT...CAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCATCAGCCTGTGAGGGCTaGCGGGCCTTTTCAAAGGAG	+
Preference number: 4 (lower is better) Translates to: QLVSIFVAELWLRGCFHPSACEG*RAFSKE Trigger: CTCCTTTGAAAAGGCCCGCCAGCCCTCACAGGCTGA...TGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGCCCAGCGTAGCCGTATaGGTGCCGCAGCAACAGGCT	+
Preference number: 4 (lower is better) Translates to: DGCARGVAWTNWDHQTTWPSVAV*VPQQQA Trigger: AGCCTGTTGCTGCGGCACCCATACGGCTACGCTGGG...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCAGTTGTAGCCACTCAGTaGGAAGGCACCCTGTGGGGA	+
Preference number: 4 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPVVATQ*EGTLWG Trigger: TCCCCACAGGGTGCCTTCTCACTGAGTGGCTACAAC...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	GCAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCCTCATAGTCTTCATCTaGGTCCTCCTCGCCAGTGTC	+
Preference number: 4 (lower is better) Translates to: AAGLHLCGRAVAPGLLPPLIVFI*VLLASV Trigger: GACACTGGCGAGGAGGACTCAGATGAAGACTATGAG...GGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	CAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAGCAGCTGCAGTTGGGTaGCACCCTTCTTATGCAGGT	+
Preference number: 4 (lower is better) Translates to: QLVSIFVAELWLRGCFHPAAAVG*HPSYAG Trigger: ACCTGCATAAGAAGGGTGGCACCCAACTGCAGCTGC...TGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	CGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGAGGCCATCCAGCTCTTaGGCTCATCCTCAGAGGACG	+
Preference number: 4 (lower is better) Translates to: RLCQGCGLDQLGSPNYLGRPSSS*AHPQRT Trigger: CGTCCTCTGAGGATGAGCGCAAGAGCTGGATGGCCT...CCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	CAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAAGTGGCCAATTTCCCTaGGTAGCAAGGCCATCCAGC	+
Preference number: 4 (lower is better) Translates to: QLVSIFVAELWLRGCFHPSGQFP*VARPSS Trigger: GCTGGATGGCCTTGCTACGCAGGGAAATTGGCCACT...TGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	TCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTGGCTATGAGGAGGGACTaGAACCTGCATCCCCCAGAC	+
Preference number: 4 (lower is better) Translates to: SPSLWQSCGSGAASTQQLAMRRD*NLHPPD Trigger: GTCTGGGGGATGCAGGTTGCAGTCCCTCCTCATAGC...CAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101316.10
CDS-3UTR CCA 90 bp	TCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTGACAGAGCTAGTCCCATaGCCAGGGGTCCAGGGTTCT	+
Preference number: 4 (lower is better) Translates to: SPSLWQSCGSGAASTQQLTELVP*PGVQGS Trigger: AGAACCCTGGACCCCTGGCCATGGGACTAGCTCTGT...CAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCCACTCTGTGCCGTGGGGGCTCAGATGTaGGTGGCCCTCGGGAAGACA	+
Preference number: 4 (lower is better) Translates to: LSTWTLVVLSRACYPLCAVGAQM*VALGKT Trigger: TGTCTTCCCGAGGGCCACCCACATCTGAGCCCCCAC...GGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCGCACAGGTGCAAACTTaGCTGCCTCCCTCGGGGAAG	+
Preference number: 4 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPAQVQT*LPPSGK Trigger: CTTCCCCGAGGGAGGCAGCCAAGTTTGCACCTGTGC...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGTCAGCCTGTGAGGGCTaGCGGGCCTTTTCAAAGGAG	+
Preference number: 4 (lower is better) Translates to: RLCQGCGLDQLGSPNYLGSACEG*RAFSKE Trigger: CTCCTTTGAAAAGGCCCGCCAGCCCTCACAGGCTGA...CCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGCCCAGCGTAGCCGTATaGGTGCCGCAGCAACAGGCT	+
Preference number: 4 (lower is better) Translates to: QKKSSLDGCARGVAWTNWPSVAV*VPQQQA Trigger: AGCCTGTTGCTGCGGCACCCATACGGCTACGCTGGG...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CAA 72 bp	GGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTaGGGGGTACGTGGATGCCACTGTCCCCACCCATCC	+
Preference number: 4 (lower is better) Translates to: GCGLDQLGSPNY*GVRGCHCPHPS Trigger: GGATGGGTGGGGACAGTGGCATCCACGTACCCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCGTTGTAGCCACTCAGTaGGAAGGCACCCTGTGGGGA	+
Preference number: 4 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPVVATQ*EGTLWG Trigger: TCCCCACAGGGTGCCTTCTCACTGAGTGGCTACAAC...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCGGGGATCGCTGGAGGTaGGGAAGAGGTGTGTTCTCT	+
Preference number: 4 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPGDRWR*GRGVFS Trigger: AGAGAACACACCTCTTCCTCACCTCCAGCGATCCCC...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCACAAAGGAGAAGCCCCTaGAACTCTGTCCATCAGGGG	+
Preference number: 4 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPQRRSP*NSVHQG Trigger: CCCCTGATGGACAGAGTTTCAGGGGCTTCTCCTTTG...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGTCAGCTCAGGGGCTATaGGGAGGGACTGCAACCTGC	+
Preference number: 4 (lower is better) Translates to: QKKSSLDGCARGVAWTNWSAQGL*GGTATC Trigger: GCAGGTTGCAGTCCCTCCTCATAGCCCCTGAGCTGA...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000101316.10
CDS-3UTR TCA 90 bp	TCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTGTGGTACAACTTCCTGTaGCCTGCTGGGGACAGGTGT	+
Preference number: 4 (lower is better) Translates to: SPSLWQSCGSGAASTQQLWYNFL*PAGDRC Trigger: ACACCTGTCCCCAGCAGGTCACAGGAAGTTGTACCA...CAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101316.10
CDS-3UTR GCA 90 bp	CGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGGCAGCTGCAGTTGGGTaGCACCCTTCTTATGCAGGT	+
Preference number: 4 (lower is better) Translates to: RLCQGCGLDQLGSPNYLGAAAVG*HPSYAG Trigger: ACCTGCATAAGAAGGGTGGCACCCAACTGCAGCTGC...CCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCAGGCCATCCAGCTCTTaGGCTCATCCTCAGAGGACG	+
Preference number: 4 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPRPSSS*AHPQRT Trigger: CGTCCTCTGAGGATGAGCGCAAGAGCTGGATGGCCT...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGAGGCCATCCAGCTCTTaGGCTCATCCTCAGAGGACG	+
Preference number: 4 (lower is better) Translates to: DGCARGVAWTNWDHQTTWRPSSS*AHPQRT Trigger: CGTCCTCTGAGGATGAGCGCAAGAGCTGGATGGCCT...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCAAGTGGCCAATTTCCCTaGGTAGCAAGGCCATCCAGC	+
Preference number: 4 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPSGQFP*VARPSS Trigger: GCTGGATGGCCTTGCTACGCAGGGAAATTGGCCACT...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	CGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGGGTAGTGCTCCACCATaGTGCCCACACTGGCAAACA	+
Preference number: 4 (lower is better) Translates to: RLCQGCGLDQLGSPNYLGGSAPP*CPHWQT Trigger: TGTTTGCCAGTGTGGGCAGCATGGTGGAGCACTACC...CCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	GTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTGGTAGTGCTCCACCATaGTGCCCACACTGGCAAACA	+
Preference number: 4 (lower is better) Translates to: VSIFVAELWLRGCFHPTAGSAPP*CPHWQT Trigger: TGTTTGCCAGTGTGGGCAGCATGGTGGAGCACTACC...AGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	GCCACACCACCAGGCATGGTCAGCAAATTCTGGGCACCAATGGCCTTCATGGGGGCTATGAGGAGGGACTaGAACCTGCATCCCCCAGAC	+
Preference number: 4 (lower is better) Translates to: ATPPGMVSKFWAPMAFMGAMRRD*NLHPPD Trigger: GTCTGGGGGATGCAGGTTGCAGTCCCTCCTCATAGC...CCCCATGAAGGCCATTGGTGCCCAGAATTTGCTGACCATGCCTGGTGGTGTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
CDS-3UTR CCA 90 bp	CAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAAGACATTGTTGGACGTaGTCTCCTCAGCTGCTCGCA	+
Preference number: 4 (lower is better) Translates to: QLVSIFVAELWLRGCFHPRHCWT*SPQLLA Trigger: TGCGAGCAGCTGAGGAGACCACGTCCAACAATGTCT...TGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	TCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTGTGGTGGGTAGGCTGGTaGATAGGTCAGGGCATCTTC	+
Preference number: 4 (lower is better) Translates to: SPSLWQSCGSGAASTQQLWWVGW*IGQGIF Trigger: GAAGATGCCCTGACCTATCCACCAGCCTACCCACCA...CAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCCACTCTGTGCCGGCAGAGCCAGTGTCTaGAAGGCCTCGCTTAGGAGG	+
Preference number: 4 (lower is better) Translates to: LSTWTLVVLSRACYPLCAGRASV*KASLRR Trigger: CCTCCTAAGCGAGGCCTTCCAGACACTGGCTCTGCC...GGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCCACTCTGTGCCATTAGCAGGCACGGGTaGGGGCTCAGATGTGGGTGG	+
Preference number: 4 (lower is better) Translates to: LSTWTLVVLSRACYPLCAISRHG*GLRCGW Trigger: CCACCCACATCTGAGCCCCCACCCGTGCCTGCTAAT...GGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCACCATGCTGCCCACACTaGCAAACAGAACCTCACCTT	+
Preference number: 4 (lower is better) Translates to: QLVSIFVAELWLRGCFHPPCCPH*QTEPHL Trigger: AAGGTGAGGTTCTGTTTGCCAGTGTGGGCAGCATGG...TGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGACAGGCTCTGATGGCTaGGCAGCACATGGGTGTGGT	+
Preference number: 4 (lower is better) Translates to: DGCARGVAWTNWDHQTTWTGSDG*AAHGCG Trigger: ACCACACCCATGTGCTGCCCAGCCATCAGAGCCTGT...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCCACTCTGTGCCGTTGTAGCCACTCAGTaGGAAGGCACCCTGTGGGGA	+
Preference number: 4 (lower is better) Translates to: LSTWTLVVLSRACYPLCAVVATQ*EGTLWG Trigger: TCCCCACAGGGTGCCTTCTCACTGAGTGGCTACAAC...GGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGTTGTAGCCACTCAGTaGGAAGGCACCCTGTGGGGA	+
Preference number: 4 (lower is better) Translates to: QKKSSLDGCARGVAWTNWVVATQ*EGTLWG Trigger: TCCCCACAGGGTGCCTTCTCACTGAGTGGCTACAAC...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGGGGATCGCTGGAGGTaGGGAAGAGGTGTGTTCTCT	+
Preference number: 4 (lower is better) Translates to: QKKSSLDGCARGVAWTNWGDRWR*GRGVFS Trigger: AGAGAACACACCTCTTCCTCACCTCCAGCGATCCCC...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGCAAAGGAGAAGCCCCTaGAACTCTGTCCATCAGGGG	+
Preference number: 4 (lower is better) Translates to: DGCARGVAWTNWDHQTTWQRRSP*NSVHQG Trigger: CCCCTGATGGACAGAGTTTCAGGGGCTTCTCCTTTG...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCAGACCAAAACCTTCCCTaGCTTGGTAGAGGAGTTCCG	+
Preference number: 4 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPDQNLP*LGRGVP Trigger: CGGAACTCCTCTACCAAGTCAGGGAAGGTTTTGGTC...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGCAGCTGCAGTTGGGTaGCACCCTTCTTATGCAGGT	+
Preference number: 4 (lower is better) Translates to: DGCARGVAWTNWDHQTTWAAAVG*HPSYAG Trigger: ACCTGCATAAGAAGGGTGGCACCCAACTGCAGCTGC...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	TCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTGAGTGCTCCACCATGCTaGCCACACTGGCAAACAGAA	+
Preference number: 4 (lower is better) Translates to: SPSLWQSCGSGAASTQQLSAPPC*PHWQTE Trigger: TTCTGTTTGCCAGTGTGGGCAGCATGGTGGAGCACT...CAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	CGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGAGTGCTCCACCATGCTaGCCACACTGGCAAACAGAA	+
Preference number: 4 (lower is better) Translates to: RLCQGCGLDQLGSPNYLGSAPPC*PHWQTE Trigger: TTCTGTTTGCCAGTGTGGGCAGCATGGTGGAGCACT...CCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCAAGACATTGTTGGACGTaGTCTCCTCAGCTGCTCGCA	+
Preference number: 4 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPRHCWT*SPQLLA Trigger: TGCGAGCAGCTGAGGAGACCACGTCCAACAATGTCT...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGTGGTGGGTAGGCTGGTaGATAGGTCAGGGCATCTTC	+
Preference number: 4 (lower is better) Translates to: DGCARGVAWTNWDHQTTWWWVGW*IGQGIF Trigger: GAAGATGCCCTGACCTATCCACCAGCCTACCCACCA...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GCAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCCCTCGGGAAGACAGGTaGAATGACTTGAGTTTGTCA	+
Preference number: 4 (lower is better) Translates to: AAGLHLCGRAVAPGLLPPPREDR*NDLSLS Trigger: TGACAAACTCAAGTCATTCCACCTGTCTTCCCGAGG...GGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CAA 72 bp	TTCCTGTTCATCTTCCCATGCAGCTGGTCTCCATCTTaGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACC	+
Preference number: 4 (lower is better) Translates to: FLFIFPCSWSPS*WQSCGSGAAST Trigger: GGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGCATGGGAAGATGAACAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CAA 72 bp	TCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATaGGGATCACCAAACTACTTGGGGGTACGTGGATGC	+
Preference number: 4 (lower is better) Translates to: SRRLCQGCGLDQ*GSPNYLGVRGC Trigger: GCATCCACGTACCCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	GCAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCGGAAGACAGGTGGAATaGCTTGAGTTTGTCACAGTT	+
Preference number: 4 (lower is better) Translates to: AAGLHLCGRAVAPGLLPPGRQVE*LEFVTV Trigger: AACTGTGACAAACTCAAGTCATTCCACCTGTCTTCC...GGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCGACCAAAACCTTCCCTaGCTTGGTAGAGGAGTTCCG	+
Preference number: 4 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPDQNLP*LGRGVP Trigger: CGGAACTCCTCTACCAAGTCAGGGAAGGTTTTGGTC...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGCAGCTGCAGTTGGGTaGCACCCTTCTTATGCAGGT	+
Preference number: 4 (lower is better) Translates to: QKKSSLDGCARGVAWTNWAAAVG*HPSYAG Trigger: ACCTGCATAAGAAGGGTGGCACCCAACTGCAGCTGC...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	GAATGGCTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCAGGCCATCCAGCTCTTaGGCTCATCCTCAGAGGACG	+
Preference number: 4 (lower is better) Translates to: EWLDGPSHPATPLVVVACRPSSS*AHPQRT Trigger: CGTCCTCTGAGGATGAGCGCAAGAGCTGGATGGCCT...GCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	GCCACACCACCAGGCATGGTCAGCAAATTCTGGGCACCAATGGCCTTCATGGGGCAACTTCCTGTGACCTaGTGGGGACAGGTGTCCTTA	+
Preference number: 4 (lower is better) Translates to: ATPPGMVSKFWAPMAFMGQLPVT*WGQVSL Trigger: TAAGGACACCTGTCCCCAGCAGGTCACAGGAAGTTG...CCCCATGAAGGCCATTGGTGCCCAGAATTTGCTGACCATGCCTGGTGGTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
CDS-3UTR CCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGCACCAATGGCCTTCATaGGGACAGGCCACTGCATCT	+
Preference number: 4 (lower is better) Translates to: QKKSSLDGCARGVAWTNWHQWPS*GQATAS Trigger: AGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTG...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCCACTCTGTGCCCACCAATGGCCTTCATaGGGACAGGCCACTGCATCT	+
Preference number: 4 (lower is better) Translates to: LSTWTLVVLSRACYPLCAHQWPS*GQATAS Trigger: AGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTG...GGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCAATGGGAAGACATTGTTaGACGTGGTCTCCTCAGCTG	+
Preference number: 4 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPMGRHC*TWSPQL Trigger: CAGCTGAGGAGACCACGTCCAACAATGTCTTCCCAT...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCCACTCTGTGCCTGGTGGGTAGGCTGGTaGATAGGTCAGGGCATCTTC	+
Preference number: 4 (lower is better) Translates to: LSTWTLVVLSRACYPLCAWWVGW*IGQGIF Trigger: GAAGATGCCCTGACCTATCCACCAGCCTACCCACCA...GGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GAATGGCTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCTCAGCCTGTGAGGGCTaGCGGGCCTTTTCAAAGGAG	+
Preference number: 4 (lower is better) Translates to: EWLDGPSHPATPLVVVACSACEG*RAFSKE Trigger: CTCCTTTGAAAAGGCCCGCCAGCCCTCACAGGCTGA...GCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCCCATGCTGCCCACACTaGCAAACAGAACCTCACCTT	+
Preference number: 4 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPPCCPH*QTEPHL Trigger: AAGGTGAGGTTCTGTTTGCCAGTGTGGGCAGCATGG...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	AGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCAAGTAGGGTGGCAGGCACCCTaGGGCCAGGCTCTACTCGCC	+
Preference number: 4 (lower is better) Translates to: RAFLCLSIPMGPRTRLQVGWQAP*GQALLA Trigger: GGCGAGTAGAGCCTGGCCTCAGGGTGCCTGCCACCC...TACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	TATGCAGGTAACCAGCCTTCGCCACACCACCAGGCATGGTCAGCAAATTCTGGGTGGTACAACTTCCTGTaGCCTGCTGGGGACAGGTGT	+
Preference number: 4 (lower is better) Translates to: YAGNQPSPHHQAWSANSGWYNFL*PAGDRC Trigger: ACACCTGTCCCCAGCAGGTCACAGGAAGTTGTACCA...CCCAGAATTTGCTGACCATGCCTGGTGGTGTGGCGAAGGCTGGTTACCTGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
CDS-3UTR TCA 90 bp	GCCTTCGCCACACCACCAGGCATGGTCAGCAAATTCTGGGCACCAATGGCCTTCGTTCTCTCATGGCACTaGCCCAACACATGGTACAAC	+
Preference number: 4 (lower is better) Translates to: AFATPPGMVSKFWAPMAFVLSWH*PNTWYN Trigger: GTTGTACCATGTGTTGGGTCAGTGCCATGAGAGAAC...GAAGGCCATTGGTGCCCAGAATTTGCTGACCATGCCTGGTGGTGTGGCGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
CDS-3UTR GCA 90 bp	CTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCCACTCTGTGCCAGTGCTCCACCATGCTaGCCACACTGGCAAACAGAA	+
Preference number: 4 (lower is better) Translates to: LSTWTLVVLSRACYPLCASAPPC*PHWQTE Trigger: TTCTGTTTGCCAGTGTGGGCAGCATGGTGGAGCACT...GGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	GAATGGCTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCGGTAGTGCTCCACCATaGTGCCCACACTGGCAAACA	+
Preference number: 4 (lower is better) Translates to: EWLDGPSHPATPLVVVACGSAPP*CPHWQT Trigger: TGTTTGCCAGTGTGGGCAGCATGGTGGAGCACTACC...GCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCCACTCTGTGCCAGACATTGTTGGACGTaGTCTCCTCAGCTGCTCGCA	+
Preference number: 4 (lower is better) Translates to: LSTWTLVVLSRACYPLCARHCWT*SPQLLA Trigger: TGCGAGCAGCTGAGGAGACCACGTCCAACAATGTCT...GGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGTTCTTCTCATGGAAGTaGCCAATTTCCCTGCGTAGC	+
Preference number: 4 (lower is better) Translates to: RLCQGCGLDQLGSPNYLGFFSWK*PISLRS Trigger: GCTACGCAGGGAAATTGGCCACTTCCATGAGAAGAA...CCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
3UTR CAA 72 bp	AAGCCCAGGCAGCACTTAGTCACCAGACCTGGGTTCTaGAGAGATGGGTCATGGAATGGCTGGATGGGCCAA	+
Preference number: 4 (lower is better) Translates to: KPRQHLVTRPGF*RDGSWNGWMGQ Trigger: TTGGCCCATCCAGCCATTCCATGACCCATCTCTCAAGAACCCAGGTCTGGTGACTAAGTGCTGCCTGGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	TCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTGGGAAGACAGGTGGAATaGCTTGAGTTTGTCACAGTT	+
Preference number: 4 (lower is better) Translates to: SPSLWQSCGSGAASTQQLGRQVE*LEFVTV Trigger: AACTGTGACAAACTCAAGTCATTCCACCTGTCTTCC...CAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	GCTCTCAGTAGCTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCCTCATAGTCTTCATCTaGGTCCTCCTCGCCAGTGTC	+
Preference number: 4 (lower is better) Translates to: ALSSSLPGHWWCSVEPATLIVFI*VLLASV Trigger: GACACTGGCGAGGAGGACTCAGATGAAGACTATGAG...GGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAGCTACTGAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	GAATGGCTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCGACCAAAACCTTCCCTaGCTTGGTAGAGGAGTTCCG	+
Preference number: 4 (lower is better) Translates to: EWLDGPSHPATPLVVVACDQNLP*LGRGVP Trigger: CGGAACTCCTCTACCAAGTCAGGGAAGGTTTTGGTC...GCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CCTCCTAGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCGCAGCAACAGGCTCTaGTGGCTGGGCAGCACATGG	+
Preference number: 4 (lower is better) Translates to: PPRAFLCLSIPMGPRTRLRSNRL*WLGSTW Trigger: CCATGTGCTGCCCAGCCATCAGAGCCTGTTGCTGCG...AAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CTGCATCTCCTCAGCCGCCATGAAGAAGATCTCACAAGCTCTTCCCTCTTAGTTTCAGCTCAGGGGCTATaGGGAGGGACTGCAACCTGC	+
Preference number: 4 (lower is better) Translates to: LHLLSRHEEDLTSSSLLVSAQGL*GGTATC Trigger: GCAGGTTGCAGTCCCTCCTCATAGCCCCTGAGCTGA...AACTAAGAGGGAAGAGCTTGTGAGATCTTCTTCATGGCGGCTGAGGAGATGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
CDS-3UTR CCA 90 bp	GCTCTCAGTAGCTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCTTGAGCAGCTGCAGTTaGGTGCCACCCTTCTTATGC	+
Preference number: 4 (lower is better) Translates to: ALSSSLPGHWWCSVEPATLSSCS*VPPFLC Trigger: GCATAAGAAGGGTGGCACCCAACTGCAGCTGCTCAA...GGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAGCTACTGAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGTTCTTCTCATGGAAGTaGCCAATTTCCCTGCGTAGC	+
Preference number: 4 (lower is better) Translates to: DGCARGVAWTNWDHQTTWFFSWK*PISLRS Trigger: GCTACGCAGGGAAATTGGCCACTTCCATGAGAAGAA...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCAAGTTCCTTCTTCTCATaGAAGTGGCCAATTTCCCTG	+
Preference number: 4 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPSSFFS*KWPISL Trigger: CAGGGAAATTGGCCACTTCCATGAGAAGAAGGAACT...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GAATGGCTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCAAGAGGTGTGTTCTCTaGTCTAGGCAGCACTGCAGG	+
Preference number: 4 (lower is better) Translates to: EWLDGPSHPATPLVVVACKRCVL*SRQHCR Trigger: CCTGCAGTGCTGCCTAGACCAGAGAACACACCTCTT...GCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGAAGACAGGTGGAATaGCTTGAGTTTGTCACAGTT	+
Preference number: 4 (lower is better) Translates to: DGCARGVAWTNWDHQTTWGRQVE*LEFVTV Trigger: AACTGTGACAAACTCAAGTCATTCCACCTGTCTTCC...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GAATGGCTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCATGGGAAGACATTGTTaGACGTGGTCTCCTCAGCTG	+
Preference number: 4 (lower is better) Translates to: EWLDGPSHPATPLVVVACMGRHC*TWSPQL Trigger: CAGCTGAGGAGACCACGTCCAACAATGTCTTCCCAT...GCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGTTCTTCTCATGGAAGTaGCCAATTTCCCTGCGTAGC	+
Preference number: 4 (lower is better) Translates to: QKKSSLDGCARGVAWTNWFFSWK*PISLRS Trigger: GCTACGCAGGGAAATTGGCCACTTCCATGAGAAGAA...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGAGTTCCTTCTTCTCATaGAAGTGGCCAATTTCCCTG	+
Preference number: 4 (lower is better) Translates to: DGCARGVAWTNWDHQTTWSSFFS*KWPISL Trigger: CAGGGAAATTGGCCACTTCCATGAGAAGAAGGAACT...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CCTCCTAGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTGCACAGGTGCAAACTTaGCTGCCTCCCTCGGGGAAG	+
Preference number: 4 (lower is better) Translates to: PPRAFLCLSIPMGPRTRLAQVQT*LPPSGK Trigger: CTTCCCCGAGGGAGGCAGCCAAGTTTGCACCTGTGC...AAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	AGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCAAGTACGCAGCAACAGGCTCTaGTGGCTGGGCAGCACATGG	+
Preference number: 4 (lower is better) Translates to: RAFLCLSIPMGPRTRLQVRSNRL*WLGSTW Trigger: CCATGTGCTGCCCAGCCATCAGAGCCTGTTGCTGCG...TACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GCTCTCAGTAGCTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCATGGTCAGCAAATTCTaGGCACCAATGGCCTTCATG	+
Preference number: 4 (lower is better) Translates to: ALSSSLPGHWWCSVEPATMVSKF*APMAFM Trigger: CATGAAGGCCATTGGTGCCCAGAATTTGCTGACCAT...GGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAGCTACTGAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GAATGGCTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCTTCTTCTCATGGAAGTaGCCAATTTCCCTGCGTAGC	+
Preference number: 4 (lower is better) Translates to: EWLDGPSHPATPLVVVACFFSWK*PISLRS Trigger: GCTACGCAGGGAAATTGGCCACTTCCATGAGAAGAA...GCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTGGCAGAGCCAGTGTCTaGAAGGCCTCGCTTAGGAGG	+
Preference number: 4 (lower is better) Translates to: NTKDHTLGLLSVALYLDIGRASV*KASLRR Trigger: CCTCCTAAGCGAGGCCTTCCAGACACTGGCTCTGCC...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CCTCCTAGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTACAGAGCTAGTCCCATaGCCAGGGGTCCAGGGTTCT	+
Preference number: 4 (lower is better) Translates to: PPRAFLCLSIPMGPRTRLTELVP*PGVQGS Trigger: AGAACCCTGGACCCCTGGCCATGGGACTAGCTCTGT...AAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTGGGGATCGCTGGAGGTaGGGAAGAGGTGTGTTCTCT	+
Preference number: 4 (lower is better) Translates to: NTKDHTLGLLSVALYLDIGDRWR*GRGVFS Trigger: AGAGAACACACCTCTTCCTCACCTCCAGCGATCCCC...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCCGCAGCAACAGGCTCTaGTGGCTGGGCAGCACATGG	+
Preference number: 4 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSRSNRL*WLGSTW Trigger: CCATGTGCTGCCCAGCCATCAGAGCCTGTTGCTGCG...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCGTGGGGGCTCAGATGTaGGTGGCCCTCGGGAAGACA	+
Preference number: 4 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSVGAQM*VALGKT Trigger: TGTCTTCCCGAGGGCCACCCACATCTGAGCCCCCAC...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTACAGGCTCTGATGGCTaGGCAGCACATGGGTGTGGT	+
Preference number: 4 (lower is better) Translates to: NTKDHTLGLLSVALYLDITGSDG*AAHGCG Trigger: ACCACACCCATGTGCTGCCCAGCCATCAGAGCCTGT...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	GCTCTCAGTAGCTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCTGCTTCTTGCTGATGTaGATGATCTTGAATGGGAAG	+
Preference number: 4 (lower is better) Translates to: ALSSSLPGHWWCSVEPATCFLLM*MILNGK Trigger: CTTCCCATTCAAGATCATTCACATCAGCAAGAAGCA...GGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAGCTACTGAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTCAAAGGAGAAGCCCCTaGAACTCTGTCCATCAGGGG	+
Preference number: 4 (lower is better) Translates to: NTKDHTLGLLSVALYLDIQRRSP*NSVHQG Trigger: CCCCTGATGGACAGAGTTTCAGGGGCTTCTCCTTTG...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	CCTCCTAGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCTCATAGTCTTCATCTaGGTCCTCCTCGCCAGTGTC	+
Preference number: 4 (lower is better) Translates to: PPRAFLCLSIPMGPRTRLLIVFI*VLLASV Trigger: GACACTGGCGAGGAGGACTCAGATGAAGACTATGAG...AAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCATGGGGACAGGCCACTaGATCTCCTCAGCCGCCATG	+
Preference number: 4 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSMGTGH*ISSAAM Trigger: CATGGCGGCTGAGGAGATGCAGTGGCCTGTCCCCAT...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000101316.10 ENSMUST00000118545.8
CDS-3UTR CCA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTCACCAATGGCCTTCATaGGGACAGGCCACTGCATCT	+
Preference number: 4 (lower is better) Translates to: NTKDHTLGLLSVALYLDIHQWPS*GQATAS Trigger: AGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTG...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CCTCCTAGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTTTGAGCAGCTGCAGTTaGGTGCCACCCTTCTTATGC	+
Preference number: 4 (lower is better) Translates to: PPRAFLCLSIPMGPRTRLLSSCS*VPPFLC Trigger: GCATAAGAAGGGTGGCACCCAACTGCAGCTGCTCAA...AAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCATTAGCAGGCACGGGTaGGGGCTCAGATGTGGGTGG	+
Preference number: 4 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSISRHG*GLRCGW Trigger: CCACCCACATCTGAGCCCCCACCCGTGCCTGCTAAT...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CCTCCTAGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCCATGCTGCCCACACTaGCAAACAGAACCTCACCTT	+
Preference number: 4 (lower is better) Translates to: PPRAFLCLSIPMGPRTRLPCCPH*QTEPHL Trigger: AAGGTGAGGTTCTGTTTGCCAGTGTGGGCAGCATGG...AAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCAAGTAACAGGCTCTGATGGCTaGGCAGCACATGGGTGTGGT	+
Preference number: 4 (lower is better) Translates to: RAFLCLSIPMGPRTRLQVTGSDG*AAHGCG Trigger: ACCACACCCATGTGCTGCCCAGCCATCAGAGCCTGT...TACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR GCA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTCAACTTCCTGTGACCTaGTGGGGACAGGTGTCCTTA	+
Preference number: 4 (lower is better) Translates to: NTKDHTLGLLSVALYLDIQLPVT*WGQVSL Trigger: TAAGGACACCTGTCCCCAGCAGGTCACAGGAAGTTG...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101316.10
CDS-3UTR CCA 90 bp	CCTCCTAGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTATGGGAAGACATTGTTaGACGTGGTCTCCTCAGCTG	+
Preference number: 4 (lower is better) Translates to: PPRAFLCLSIPMGPRTRLMGRHC*TWSPQL Trigger: CAGCTGAGGAGACCACGTCCAACAATGTCTTCCCAT...AAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	GAATGGCTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCGTGAATGATCTTGAATaGGAAGACATTGTTGGACGT	+
Preference number: 4 (lower is better) Translates to: EWLDGPSHPATPLVVVACVNDLE*EDIVGR Trigger: ACGTCCAACAATGTCTTCCCATTCAAGATCATTCAC...GCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCACAGAGCTAGTCCCATaGCCAGGGGTCCAGGGTTCT	+
Preference number: 4 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSTELVP*PGVQGS Trigger: AGAACCCTGGACCCCTGGCCATGGGACTAGCTCTGT...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTAAGAGGTGTGTTCTCTaGTCTAGGCAGCACTGCAGG	+
Preference number: 4 (lower is better) Translates to: NTKDHTLGLLSVALYLDIKRCVL*SRQHCR Trigger: CCTGCAGTGCTGCCTAGACCAGAGAACACACCTCTT...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCCACCAATGGCCTTCATaGGGACAGGCCACTGCATCT	+
Preference number: 4 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSHQWPS*GQATAS Trigger: AGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTG...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCAAGTAAGACATTGTTGGACGTaGTCTCCTCAGCTGCTCGCA	+
Preference number: 4 (lower is better) Translates to: RAFLCLSIPMGPRTRLQVRHCWT*SPQLLA Trigger: TGCGAGCAGCTGAGGAGACCACGTCCAACAATGTCT...TACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCTGGTGGGTAGGCTGGTaGATAGGTCAGGGCATCTTC	+
Preference number: 4 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSWWVGW*IGQGIF Trigger: GAAGATGCCCTGACCTATCCACCAGCCTACCCACCA...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AATCAAACCCTGGTCATTGAGACAAAGGTCATCTCTGATTTATTGAGAGGCAATGGCAGAGCCAGTGTCTaGAAGGCCTCGCTTAGGAGG	+
Preference number: 4 (lower is better) Translates to: NQTLVIETKVISDLLRGNGRASV*KASLRR Trigger: CCTCCTAAGCGAGGCCTTCCAGACACTGGCTCTGCC...ATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCTTGAGCAGCTGCAGTTaGGTGCCACCCTTCTTATGC	+
Preference number: 4 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSLSSCS*VPPFLC Trigger: GCATAAGAAGGGTGGCACCCAACTGCAGCTGCTCAA...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCAAGTAATGGGAAGACATTGTTaGACGTGGTCTCCTCAGCTG	+
Preference number: 4 (lower is better) Translates to: RAFLCLSIPMGPRTRLQVMGRHC*TWSPQL Trigger: CAGCTGAGGAGACCACGTCCAACAATGTCTTCCCAT...TACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	AATCAAACCCTGGTCATTGAGACAAAGGTCATCTCTGATTTATTGAGAGGCAATCAAAGGAGAAGCCCCTaGAACTCTGTCCATCAGGGG	+
Preference number: 4 (lower is better) Translates to: NQTLVIETKVISDLLRGNQRRSP*NSVHQG Trigger: CCCCTGATGGACAGAGTTTCAGGGGCTTCTCCTTTG...ATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTAGTTCCTTCTTCTCATaGAAGTGGCCAATTTCCCTG	+
Preference number: 4 (lower is better) Translates to: NTKDHTLGLLSVALYLDISSFFS*KWPISL Trigger: CAGGGAAATTGGCCACTTCCATGAGAAGAAGGAACT...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCAAGTACCTCGGGAAGACAGGTaGAATGACTTGAGTTTGTCA	+
Preference number: 4 (lower is better) Translates to: RAFLCLSIPMGPRTRLQVPREDR*NDLSLS Trigger: TGACAAACTCAAGTCATTCCACCTGTCTTCCCGAGG...TACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	CCTCCTAGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTGTGAATGATCTTGAATaGGAAGACATTGTTGGACGT	+
Preference number: 4 (lower is better) Translates to: PPRAFLCLSIPMGPRTRLVNDLE*EDIVGR Trigger: ACGTCCAACAATGTCTTCCCATTCAAGATCATTCAC...AAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCAAGTAAGTTCCTTCTTCTCATaGAAGTGGCCAATTTCCCTG	+
Preference number: 4 (lower is better) Translates to: RAFLCLSIPMGPRTRLQVSSFFS*KWPISL Trigger: CAGGGAAATTGGCCACTTCCATGAGAAGAAGGAACT...TACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AAGGTCTCTGGCTGCCCTGACCTCCAAATGAATTTATTTTCACAGAAAAAGTCCCCTCGGGAAGACAGGTaGAATGACTTGAGTTTGTCA	+
Preference number: 4 (lower is better) Translates to: KVSGCPDLQMNLFSQKKSPREDR*NDLSLS Trigger: TGACAAACTCAAGTCATTCCACCTGTCTTCCCGAGG...GGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AATCAAACCCTGGTCATTGAGACAAAGGTCATCTCTGATTTATTGAGAGGCAATAAGAGGTGTGTTCTCTaGTCTAGGCAGCACTGCAGG	+
Preference number: 4 (lower is better) Translates to: NQTLVIETKVISDLLRGNKRCVL*SRQHCR Trigger: CCTGCAGTGCTGCCTAGACCAGAGAACACACCTCTT...ATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AATCAAACCCTGGTCATTGAGACAAAGGTCATCTCTGATTTATTGAGAGGCAATCCTCGGGAAGACAGGTaGAATGACTTGAGTTTGTCA	+
Preference number: 4 (lower is better) Translates to: NQTLVIETKVISDLLRGNPREDR*NDLSLS Trigger: TGACAAACTCAAGTCATTCCACCTGTCTTCCCGAGG...ATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR TCA 90 bp	AATCAAACCCTGGTCATTGAGACAAAGGTCATCTCTGATTTATTGAGAGGCAATGGAAGACAGGTGGAATaGCTTGAGTTTGTCACAGTT	+
Preference number: 4 (lower is better) Translates to: NQTLVIETKVISDLLRGNGRQVE*LEFVTV Trigger: AACTGTGACAAACTCAAGTCATTCCACCTGTCTTCC...ATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CCA 90 bp	AATCAAACCCTGGTCATTGAGACAAAGGTCATCTCTGATTTATTGAGAGGCAATGTGAATGATCTTGAATaGGAAGACATTGTTGGACGT	+
Preference number: 4 (lower is better) Translates to: NQTLVIETKVISDLLRGNVNDLE*EDIVGR Trigger: ACGTCCAACAATGTCTTCCCATTCAAGATCATTCAC...ATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 90 bp	AGCGACAGGGTCCCGAGGTGGGCCCACCGGCCGCAGCCTCGTCCCTaGAGCCTGTCTCTCGCCAGCCCCAGCTCCGCGGCCGCGACCCTG	+
Preference number: 5 (lower is better) Translates to: SDRVPRWAHRPQPRP*SLSLASPSSAAATL Trigger: CAGGGTCGCGGCCGCGGAGCTGGGGCTGGCGAGAGACAGGCTCCAGGGACGAGGCTGCGGCCGGTGGGCCCACCTCGGGACCCTGTCGCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118545.8
CDS CCA 90 bp	CGGCCAGCGCCCGCCTTCCCTGTGAGCAGCGACAGGGTCCCGAGGTaGGCCCACCGGCCGCAGCCTCGTCCCTGGAGCCTGTCTCTCGCC	+
Preference number: 5 (lower is better) Translates to: RPAPAFPVSSDRVPR*AHRPQPRPWSLSLA Trigger: GGCGAGAGACAGGCTCCAGGGACGAGGCTGCGGCCGGTGGGCCCACCTCGGGACCCTGTCGCTGCTCACAGGGAAGGCGGGCGCTGGCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118545.8
CDS GCA 90 bp	GGCAGCACTGCAGGCCGAACAGTAGCCTCAGGCATGGGCATCTTCTaGACAGGAGGCCTGGGGGCCACAGGGGGCACAGGTGCAAACTTG	+
Preference number: 5 (lower is better) Translates to: GSTAGRTVASGMGIF*TGGLGATGGTGANL Trigger: CAAGTTTGCACCTGTGCCCCCTGTGGCCCCCAGGCCTCCTGTGCAGAAGATGCCCATGCCTGAGGCTACTGTTCGGCCTGCAGTGCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 90 bp	GCCCAGCGTAGCCGTATGGGTGCCGCAGCAACAGGCTCTGATGGCTaGGCAGCACATGGGTGTGGTAGTGCTCCACCATGCTGCCCACAC	+
Preference number: 5 (lower is better) Translates to: AQRSRMGAAATGSDG*AAHGCGSAPPCCPH Trigger: GTGTGGGCAGCATGGTGGAGCACTACCACACCCATGTGCTGCCCAGCCATCAGAGCCTGTTGCTGCGGCACCCATACGGCTACGCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 90 bp	GCAAGGATGTTTCCGGAGGTTGGGCACGGTGGGTACATTGCTCATTaGGGGGTCACTCATCCTCCGAGGGGTGGCAGGCACCCTGAGGCC	+
Preference number: 5 (lower is better) Translates to: ARMFPEVGHGGYIAH*GVTHPPRGGRHPEA Trigger: GGCCTCAGGGTGCCTGCCACCCCTCGGAGGATGAGTGACCCCCCAATGAGCAATGTACCCACCGTGCCCAACCTCCGGAAACATCCTTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 90 bp	GTGGCAACGGCCATGGTGGTAGAGCTGGAGACAGAGCTAGTCCCATaGCCAGGGGTCCAGGGTTCTAGGCCGGGATTCACACTGTCCCGG	+
Preference number: 5 (lower is better) Translates to: VATAMVVELETELVP*PGVQGSRPGFTLSR Trigger: CCGGGACAGTGTGAATCCCGGCCTAGAACCCTGGACCCCTGGCCATGGGACTAGCTCTGTCTCCAGCTCTACCACCATGGCCGTTGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS GCA 90 bp	GTCAGCAAATTCTGGGCACCAATGGCCTTCATGGGGACAGGCCACTaGATCTCCTCAGCCGCCATGAAGGGTGTCCACGCGGCGGGCACA	+
Preference number: 5 (lower is better) Translates to: VSKFWAPMAFMGTGH*ISSAAMKGVHAAGT Trigger: TGTGCCCGCCGCGTGGACACCCTTCATGGCGGCTGAGGAGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTGCCCAGAATTTGCTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118545.8
CDS CCA 90 bp	GGCACGGGTGGGGGCTCAGATGTGGGTGGCCCTCGGGAAGACAGGTaGAATGACTTGAGTTTGTCACAGTTCCTAGAGGTGGCAACGGCC	+
Preference number: 5 (lower is better) Translates to: GTGGGSDVGGPREDR*NDLSLSQFLEVATA Trigger: GGCCGTTGCCACCTCTAGGAACTGTGACAAACTCAAGTCATTCCACCTGTCTTCCCGAGGGCCACCCACATCTGAGCCCCCACCCGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCAAAGCGGAGGGGCCATTaGAGCAGCTGCAGTTGGGTG	+
Preference number: 5 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPKRRGH*SSCSWV Trigger: CACCCAACTGCAGCTGCTCAAATGGCCCCTCCGCTT...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	GTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTAAGCGGAGGGGCCATTaGAGCAGCTGCAGTTGGGTG	+
Preference number: 5 (lower is better) Translates to: VSIFVAELWLRGCFHPTAKRRGH*SSCSWV Trigger: CACCCAACTGCAGCTGCTCAAATGGCCCCTCCGCTT...AGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	GCAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCTTTGAGCAGCTGCAGTaGGGTGCCACCCTTCTTATG	+
Preference number: 5 (lower is better) Translates to: AAGLHLCGRAVAPGLLPPFEQLQ*GATLLM Trigger: CATAAGAAGGGTGGCACCCAACTGCAGCTGCTCAAA...GGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 90 bp	CAAGTCAGAGAAGGCTGGCTTCCGAGGTACAGGCACAGGGGGTGGTaGGTAGGCTGGTGGATAGGTCAGGGCATCTTCAAGCTTCATGGG	+
Preference number: 5 (lower is better) Translates to: QVREGWLPRYRHRGW*VGWWIGQGIFKLHG Trigger: CCCATGAAGCTTGAAGATGCCCTGACCTATCCACCAGCCTACCCACCACCCCCTGTGCCTGTACCTCGGAAGCCAGCCTTCTCTGACTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCAAGGCCATCCAGCTCTaGCGCTCATCCTCAGAGGAC	+
Preference number: 5 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPKAIQL*RSSSED Trigger: GTCCTCTGAGGATGAGCGCAAGAGCTGGATGGCCTT...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS GCA 90 bp	GGCTCTGATGGCTGGGCAGCACATGGGTGTGGTAGTGCTCCACCATaGTGCCCACACTGGCAAACAGAACCTCACCTTCCAGGTAGAACT	+
Preference number: 5 (lower is better) Translates to: GSDGWAAHGCGSAPP*CPHWQTEPHLPGRT Trigger: AGTTCTACCTGGAAGGTGAGGTTCTGTTTGCCAGTGTGGGCAGCATGGTGGAGCACTACCACACCCATGTGCTGCCCAGCCATCAGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS GCA 90 bp	GTCAGCAAATTCTGGGCACCAATGGCCTTCATGGGGACAGGCCACTaGATCTCCTCAGCCGCCATGAAGCTCATGGCACTGACCCAACAC	+
Preference number: 5 (lower is better) Translates to: VSKFWAPMAFMGTGH*ISSAAMKLMALTQH Trigger: GTGTTGGGTCAGTGCCATGAGCTTCATGGCGGCTGAGGAGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTGCCCAGAATTTGCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101316.10
CDS-3UTR CAA 90 bp	CAGCTGGTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAAATGGGAAGACATTGTaGGACGTGGTCTCCTCAGCT	+
Preference number: 5 (lower is better) Translates to: QLVSIFVAELWLRGCFHPNGKTL*DVVSSA Trigger: AGCTGAGGAGACCACGTCCAACAATGTCTTCCCATT...TGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	CTCTCTACCTGGACATTGGTGGTGCTCAGTAGAGCCTGCTACCCACTCTGTGCCAAGGCCATCCAGCTCTaGCGCTCATCCTCAGAGGAC	+
Preference number: 5 (lower is better) Translates to: LSTWTLVVLSRACYPLCAKAIQL*RSSSED Trigger: GTCCTCTGAGGATGAGCGCAAGAGCTGGATGGCCTT...GGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGAAGGCCATCCAGCTCTaGCGCTCATCCTCAGAGGAC	+
Preference number: 5 (lower is better) Translates to: QKKSSLDGCARGVAWTNWKAIQL*RSSSED Trigger: GTCCTCTGAGGATGAGCGCAAGAGCTGGATGGCCTT...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	GACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGTTTGAGCAGCTGCAGTaGGGTGCCACCCTTCTTATG	+
Preference number: 5 (lower is better) Translates to: DGCARGVAWTNWDHQTTWFEQLQ*GATLLM Trigger: CATAAGAAGGGTGGCACCCAACTGCAGCTGCTCAAA...CCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	CGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGAATGGGAAGACATTGTaGGACGTGGTCTCCTCAGCT	+
Preference number: 5 (lower is better) Translates to: RLCQGCGLDQLGSPNYLGNGKTL*DVVSSA Trigger: AGCTGAGGAGACCACGTCCAACAATGTCTTCCCATT...CCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	GAATGGCTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCAAGGCCATCCAGCTCTaGCGCTCATCCTCAGAGGAC	+
Preference number: 5 (lower is better) Translates to: EWLDGPSHPATPLVVVACKAIQL*RSSSED Trigger: GTCCTCTGAGGATGAGCGCAAGAGCTGGATGGCCTT...GCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	GTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTTTGAATGGGAAGACATaGTTGGACGTGGTCTCCTCA	+
Preference number: 5 (lower is better) Translates to: VSIFVAELWLRGCFHPTALNGKT*LDVVSS Trigger: TGAGGAGACCACGTCCAACAATGTCTTCCCATTCAA...AGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	CTTGACCAAGCTGGACTAGGGGCTGCTCACAGCCAGCAACCAGCCCCAGTACCATTGAATGGGAAGACATaGTTGGACGTGGTCTCCTCA	+
Preference number: 5 (lower is better) Translates to: LDQAGLGAAHSQQPAPVPLNGKT*LDVVSS Trigger: TGAGGAGACCACGTCCAACAATGTCTTCCCATTCAA...TGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	TCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTGAAAACCTTCCCTGACTaGGTAGAGGAGTTCCGAATG	+
Preference number: 5 (lower is better) Translates to: SPSLWQSCGSGAASTQQLKTFPD*VEEFRM Trigger: CATTCGGAACTCCTCTACCAAGTCAGGGAAGGTTTT...CAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS TCA 90 bp	TTCCCTGACTTGGTAGAGGAGTTCCGAATGCAATACAGCCCATCCTaGGGCTCTCCACGGGGGTCCGTAGCTTTGAACAACCTTTCCACC	+
Preference number: 5 (lower is better) Translates to: FPDLVEEFRMQYSPS*GSPRGSVALNNLST Trigger: GGTGGAAAGGTTGTTCAAAGCTACGGACCCCCGTGGAGAGCCTCAGGATGGGCTGTATTGCATTCGGAACTCCTCTACCAAGTCAGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	CAGAAAAAGTCCAGTCTAGACGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGAATGGGAAGACATTGTaGGACGTGGTCTCCTCAGCT	+
Preference number: 5 (lower is better) Translates to: QKKSSLDGCARGVAWTNWNGKTL*DVVSSA Trigger: AGCTGAGGAGACCACGTCCAACAATGTCTTCCCATT...CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	ATCTGTAAGAAGTCTTACTGGAACCTCCCCGACCTCCCACCCCTTCCCTGCCCCTTGAATGGGAAGACATaGTTGGACGTGGTCTCCTCA	+
Preference number: 5 (lower is better) Translates to: ICKKSYWNLPDLPPLPCPLNGKT*LDVVSS Trigger: TGAGGAGACCACGTCCAACAATGTCTTCCCATTCAA...GGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	GTCTCCATCTTTGTGGCAGAGCTGTGGCTCCGGGGCTGCTTCCACCCAACAGCTGACAGGTGGAATGACTaGAGTTTGTCACAGTTCCTA	+
Preference number: 5 (lower is better) Translates to: VSIFVAELWLRGCFHPTADRWND*SLSQFL Trigger: TAGGAACTGTGACAAACTCAAGTCATTCCACCTGTC...AGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	CGGCTGTGCCAGGGGTGTGGCCTGGACCAATTGGGATCACCAAACTACTTGGGGGACAGGTGGAATGACTaGAGTTTGTCACAGTTCCTA	+
Preference number: 5 (lower is better) Translates to: RLCQGCGLDQLGSPNYLGDRWND*SLSQFL Trigger: TAGGAACTGTGACAAACTCAAGTCATTCCACCTGTC...CCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS GCA 90 bp	TGTCTAGAGGTAGTTCCTTCTTCTCATGGAAGTGGCCAATTTCCCTaGGTAGCAAGGCCATCCAGCTCTTGCGCTCATCCTCAGAGGACG	+
Preference number: 5 (lower is better) Translates to: CLEVVPSSHGSGQFP*VARPSSSCAHPQRT Trigger: CGTCCTCTGAGGATGAGCGCAAGAGCTGGATGGCCTTGCTACGCAGGGAAATTGGCCACTTCCATGAGAAGAAGGAACTACCTCTAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 90 bp	CTAGAGTCGCTGGTGTCTAGAGGTAGTTCCTTCTTCTCATGGAAGTaGCCAATTTCCCTGCGTAGCAAGGCCATCCAGCTCTTGCGCTCA	+
Preference number: 5 (lower is better) Translates to: LESLVSRGSSFFSWK*PISLRSKAIQLLRS Trigger: TGAGCGCAAGAGCTGGATGGCCTTGCTACGCAGGGAAATTGGCCACTTCCATGAGAAGAAGGAACTACCTCTAGACACCAGCGACTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 90 bp	CTCATGGCACTGACCCAACACATGGTACAACTTCCTGTGACCTGCTaGGGACAGGTGTCCTTAAATCCGGAAAGGCTATTCAGCTCAGGG	+
Preference number: 5 (lower is better) Translates to: LMALTQHMVQLPVTC*GQVSLNPERLFSSG Trigger: CCCTGAGCTGAATAGCCTTTCCGGATTTAAGGACACCTGTCCCCAGCAGGTCACAGGAAGTTGTACCATGTGTTGGGTCAGTGCCATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101316.10 ENSMUST00000138912.8
CDS CCA 90 bp	TCTGAGCTAGAGTCGCTGGTGTCTAGAGGTAGTTCCTTCTTCTCATaGAAGTGGCCAATTTCCCTGCGTAGCAAGGCCATCCAGCTCTTG	+
Preference number: 5 (lower is better) Translates to: SELESLVSRGSSFFS*KWPISLRSKAIQLL Trigger: CAAGAGCTGGATGGCCTTGCTACGCAGGGAAATTGGCCACTTCCATGAGAAGAAGGAACTACCTCTAGACACCAGCGACTCTAGCTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	GAATGGCTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCTTGAATGGGAAGACATaGTTGGACGTGGTCTCCTCA	+
Preference number: 5 (lower is better) Translates to: EWLDGPSHPATPLVVVACLNGKT*LDVVSS Trigger: TGAGGAGACCACGTCCAACAATGTCTTCCCATTCAA...GCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	GAATGGCTGGATGGGCCAAGTCATCCAGCCACTCCTTTAGTAGTTGTGGCCTGCAAAACCTTCCCTGACTaGGTAGAGGAGTTCCGAATG	+
Preference number: 5 (lower is better) Translates to: EWLDGPSHPATPLVVVACKTFPD*VEEFRM Trigger: CATTCGGAACTCCTCTACCAAGTCAGGGAAGGTTTT...GCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS GCA 90 bp	AAGCTCATGGCACTGACCCAACACATGGTACAACTTCCTGTGACCTaGTGGGGACAGGTGTCCTTAAATCCGGAAAGGCTATTCAGCTCA	+
Preference number: 5 (lower is better) Translates to: KLMALTQHMVQLPVT*WGQVSLNPERLFSS Trigger: TGAGCTGAATAGCCTTTCCGGATTTAAGGACACCTGTCCCCAGCAGGTCACAGGAAGTTGTACCATGTGTTGGGTCAGTGCCATGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101316.10
CDS GCA 90 bp	TCTCTCATGGCACTGACCCAACACATGGTACAACTTCCTGTGACCTaGTGGGGACAGGTGTCCTTAAATCCGGAAAGGCTATTCAGCTCA	+
Preference number: 5 (lower is better) Translates to: SLMALTQHMVQLPVT*WGQVSLNPERLFSS Trigger: TGAGCTGAATAGCCTTTCCGGATTTAAGGACACCTGTCCCCAGCAGGTCACAGGAAGTTGTACCATGTGTTGGGTCAGTGCCATGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138912.8
CDS-3UTR CAA 90 bp	CCTCCTAGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTAATGGGAAGACATTGTaGGACGTGGTCTCCTCAGCT	+
Preference number: 5 (lower is better) Translates to: PPRAFLCLSIPMGPRTRLNGKTL*DVVSSA Trigger: AGCTGAGGAGACCACGTCCAACAATGTCTTCCCATT...AAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS TCA 90 bp	TCAGAGGACGCTGAGAAGAACCATGTTCGGTGCTTCTTGCTGATGTaGATGATCTTGAATGGGAAGACATTGTTGGACGTGGTCTCCTCA	+
Preference number: 5 (lower is better) Translates to: SEDAEKNHVRCFLLM*MILNGKTLLDVVSS Trigger: TGAGGAGACCACGTCCAACAATGTCTTCCCATTCAAGATCATTCACATCAGCAAGAAGCACCGAACATGGTTCTTCTCAGCGTCCTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	AACACTAAAGACCACACATTAGGGCTGCTCTCAGTAGCTCTCTACCTGGACATTGACAGGTGGAATGACTaGAGTTTGTCACAGTTCCTA	+
Preference number: 5 (lower is better) Translates to: NTKDHTLGLLSVALYLDIDRWND*SLSQFL Trigger: TAGGAACTGTGACAAACTCAAGTCATTCCACCTGTC...AATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	AGAGCATTCCTATGTCTTAGCATTCCTATGGGTCCTAGGACAAGGCTTCAAGTAAAAACCTTCCCTGACTaGGTAGAGGAGTTCCGAATG	+
Preference number: 5 (lower is better) Translates to: RAFLCLSIPMGPRTRLQVKTFPD*VEEFRM Trigger: CATTCGGAACTCCTCTACCAAGTCAGGGAAGGTTTT...TACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	AATCAAACCCTGGTCATTGAGACAAAGGTCATCTCTGATTTATTGAGAGGCAATTTTGAGCAGCTGCAGTaGGGTGCCACCCTTCTTATG	+
Preference number: 5 (lower is better) Translates to: NQTLVIETKVISDLLRGNFEQLQ*GATLLM Trigger: CATAAGAAGGGTGGCACCCAACTGCAGCTGCTCAAA...ATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS TCA 90 bp	GTCGTCCTCATCTTCATGTTCGTAATCTTCATTGTCCATGGGATATaGAGACAGGCTGATATCTATAGGTCGCTCAACTGCACCATAGAA	+
Preference number: 5 (lower is better) Translates to: VVLIFMFVIFIVHGI*RQADIYRSLNCTIE Trigger: TTCTATGGTGCAGTTGAGCGACCTATAGATATCAGCCTGTCTTCATATCCCATGGACAATGAAGATTACGAACATGAAGATGAGGACGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS-3UTR CAA 90 bp	AATCAAACCCTGGTCATTGAGACAAAGGTCATCTCTGATTTATTGAGAGGCAATGACAGGTGGAATGACTaGAGTTTGTCACAGTTCCTA	+
Preference number: 5 (lower is better) Translates to: NQTLVIETKVISDLLRGNDRWND*SLSQFL Trigger: TAGGAACTGTGACAAACTCAAGTCATTCCACCTGTC...ATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS GCA 72 bp	GCAGGCCGAACAGTAGCCTCAGGCATGGGCATCTTCTaGACAGGAGGCCTGGGGGCCACAGGGGGCACAGGT	+
Preference number: 6 (lower is better) Translates to: AGRTVASGMGIF*TGGLGATGGTG Trigger: ACCTGTGCCCCCTGTGGCCCCCAGGCCTCCTGTGCAGAAGATGCCCATGCCTGAGGCTACTGTTCGGCCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS GCA 72 bp	CACCCTGAGGCCAGGCTCTACTCGCCTCAGGCCCAATaGGTCCTTAGCATCCTCAGGGGCAGAGCCAGTGTC	+
Preference number: 6 (lower is better) Translates to: HPEARLYSPQAQ*VLSILRGRASV Trigger: GACACTGGCTCTGCCCCTGAGGATGCTAAGGACGCATTGGGCCTGAGGCGAGTAGAGCCTGGCCTCAGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 72 bp	GGTGAACGAGTGGGCACGGGGCAAGTCAGAGAAGGCTaGCTTCCGAGGTACAGGCACAGGGGGTGGTGGGTA	+
Preference number: 6 (lower is better) Translates to: GERVGTGQVREG*LPRYRHRGWWV Trigger: TACCCACCACCCCCTGTGCCTGTACCTCGGAAGCCAGCCTTCTCTGACTTGCCCCGTGCCCACTCGTTCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS GCA 72 bp	TTCTGGGCACCAATGGCCTTCATGGGGACAGGCCACTaGATCTCCTCAGCCGCCATGAAGGGTGTCCACGCG	+
Preference number: 6 (lower is better) Translates to: FWAPMAFMGTGH*ISSAAMKGVHA Trigger: CGCGTGGACACCCTTCATGGCGGCTGAGGAGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTGCCCAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118545.8
CDS CCA 72 bp	AGCCGTATGGGTGCCGCAGCAACAGGCTCTGATGGCTaGGCAGCACATGGGTGTGGTAGTGCTCCACCATGC	+
Preference number: 6 (lower is better) Translates to: SRMGAAATGSDG*AAHGCGSAPPC Trigger: GCATGGTGGAGCACTACCACACCCATGTGCTGCCCAGCCATCAGAGCCTGTTGCTGCGGCACCCATACGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 72 bp	GGGGGATCGCTGGAGGTGAGGAAGAGGTGTGTTCTCTaGTCTAGGCAGCACTGCAGGCCGAACAGTAGCCTC	+
Preference number: 6 (lower is better) Translates to: GGSLEVRKRCVL*SRQHCRPNSSL Trigger: GAGGCTACTGTTCGGCCTGCAGTGCTGCCTAGACCAGAGAACACACCTCTTCCTCACCTCCAGCGATCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS GCA 72 bp	TTCTGGGCACCAATGGCCTTCATGGGGACAGGCCACTaGATCTCCTCAGCCGCCATGAAGCTCATGGCACTG	+
Preference number: 6 (lower is better) Translates to: FWAPMAFMGTGH*ISSAAMKLMAL Trigger: CAGTGCCATGAGCTTCATGGCGGCTGAGGAGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTGCCCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101316.10
CDS CCA 72 bp	AGGCTGGTGGATAGGTCAGGGCATCTTCAAGCTTCATaGGCCCCGGGGAATCAGGCTCCAGGTACGAGTCGT	+
Preference number: 6 (lower is better) Translates to: RLVDRSGHLQAS*APGNQAPGTSR Trigger: ACGACTCGTACCTGGAGCCTGATTCCCCGGGGCCCATGAAGCTTGAAGATGCCCTGACCTATCCACCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 72 bp	CTTCCGAGGTACAGGCACAGGGGGTGGTGGGTAGGCTaGTGGATAGGTCAGGGCATCTTCAAGCTTCATGGG	+
Preference number: 6 (lower is better) Translates to: LPRYRHRGWWVG*WIGQGIFKLHG Trigger: CCCATGAAGCTTGAAGATGCCCTGACCTATCCACCAGCCTACCCACCACCCCCTGTGCCTGTACCTCGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 72 bp	TCTGAGTCCTCCTCGCCAGTGTCAGCCTGTGAGGGCTaGCGGGCCTTTTCAAAGGAGAAGCCCCTGAAACTC	+
Preference number: 6 (lower is better) Translates to: SESSSPVSACEG*RAFSKEKPLKL Trigger: GAGTTTCAGGGGCTTCTCCTTTGAAAAGGCCCGCCAGCCCTCACAGGCTGACACTGGCGAGGAGGACTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS TCA 72 bp	CTCAGCTGCTCGCATCACTCTGTTGTAGCCACTCAGTaGGAAGGCACCCTGTGGGGAGGCAGATGTGCTGCT	+
Preference number: 6 (lower is better) Translates to: LSCSHHSVVATQ*EGTLWGGRCAA Trigger: AGCAGCACATCTGCCTCCCCACAGGGTGCCTTCTCACTGAGTGGCTACAACAGAGTGATGCGAGCAGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 72 bp	TATCTTCAGGAACTTGGGCTTATTAGCAGGCACGGGTaGGGGCTCAGATGTGGGTGGCCCTCGGGAAGACAG	+
Preference number: 6 (lower is better) Translates to: YLQELGLISRHG*GLRCGWPSGRQ Trigger: CTGTCTTCCCGAGGGCCACCCACATCTGAGCCCCCACCCGTGCCTGCTAATAAGCCCAAGTTCCTGAAGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 72 bp	GGCAGTAAGGGACTTGGACTTTTAGAGGTGAACGAGTaGGCACGGGGCAAGTCAGAGAAGGCTGGCTTCCGA	+
Preference number: 6 (lower is better) Translates to: GSKGLGLLEVNE*ARGKSEKAGFR Trigger: TCGGAAGCCAGCCTTCTCTGACTTGCCCCGTGCCCACTCGTTCACCTCTAAAAGTCCAAGTCCCTTACTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CAA 72 bp	GGTGGCCCTCGGGAAGACAGGTGGAATGACTTGAGTTaGTCACAGTTCCTAGAGGTGGCAACGGCCATGGTG	+
Preference number: 6 (lower is better) Translates to: GGPREDRWNDLS*SQFLEVATAMV Trigger: CACCATGGCCGTTGCCACCTCTAGGAACTGTGACAAACTCAAGTCATTCCACCTGTCTTCCCGAGGGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CAA 90 bp	TCAGATGTGGGTGGCCCTCGGGAAGACAGGTGGAATGACTTGAGTTaGTCACAGTTCCTAGAGGTGGCAACGGCCATGGTGGTAGAGCTG	+
Preference number: 6 (lower is better) Translates to: SDVGGPREDRWNDLS*SQFLEVATAMVVEL Trigger: CAGCTCTACCACCATGGCCGTTGCCACCTCTAGGAACTGTGACAAACTCAAGTCATTCCACCTGTCTTCCCGAGGGCCACCCACATCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CAA 72 bp	GATCACAAAGCGGAGGGGCCATTTGAGCAGCTGCAGTaGGGTGCCACCCTTCTTATGCAGGTAACCAGCCTT	+
Preference number: 6 (lower is better) Translates to: DHKAEGPFEQLQ*GATLLMQVTSL Trigger: AAGGCTGGTTACCTGCATAAGAAGGGTGGCACCCAACTGCAGCTGCTCAAATGGCCCCTCCGCTTTGTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS TCA 72 bp	TTGGTAGAGGAGTTCCGAATGCAATACAGCCCATCCTaGGGCTCTCCACGGGGGTCCGTAGCTTTGAACAAC	+
Preference number: 6 (lower is better) Translates to: LVEEFRMQYSPS*GSPRGSVALNN Trigger: GTTGTTCAAAGCTACGGACCCCCGTGGAGAGCCTCAGGATGGGCTGTATTGCATTCGGAACTCCTCTACCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS GCA 72 bp	GCACTGACCCAACACATGGTACAACTTCCTGTGACCTaGTGGGGACAGGTGTCCTTAAATCCGGAAAGGCTA	+
Preference number: 6 (lower is better) Translates to: ALTQHMVQLPVT*WGQVSLNPERL Trigger: TAGCCTTTCCGGATTTAAGGACACCTGTCCCCAGCAGGTCACAGGAAGTTGTACCATGTGTTGGGTCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101316.10 ENSMUST00000138912.8
CDS CAA 72 bp	TTGAACAACCTTTCCACCTCGCAGGACTCTGTCGTGTaGACAAACACCGAGTTAGGCAGCGGCACCTTCTCA	+
Preference number: 6 (lower is better) Translates to: LNNLSTSQDSVV*TNTELGSGTFS Trigger: TGAGAAGGTGCCGCTGCCTAACTCGGTGTTTGTCAACACGACAGAGTCCTGCGAGGTGGAAAGGTTGTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS CCA 72 bp	CTGACCCAACACATGGTACAACTTCCTGTGACCTGCTaGGGACAGGTGTCCTTAAATCCGGAAAGGCTATTC	+
Preference number: 6 (lower is better) Translates to: LTQHMVQLPVTC*GQVSLNPERLF Trigger: GAATAGCCTTTCCGGATTTAAGGACACCTGTCCCCAGCAGGTCACAGGAAGTTGTACCATGTGTTGGGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101316.10 ENSMUST00000138912.8
CDS CAA 72 bp	GAAGATTCATCCCACACGACCAAAACCTTCCCTGACTaGGTAGAGGAGTTCCGAATGCAATACAGCCCATCC	+
Preference number: 6 (lower is better) Translates to: EDSSHTTKTFPD*VEEFRMQYSPS Trigger: GGATGGGCTGTATTGCATTCGGAACTCCTCTACCAAGTCAGGGAAGGTTTTGGTCGTGTGGGATGAATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS TCA 72 bp	GTTAGAAGATTCATCCCACACGACCAAAACCTTCCCTaGCTTGGTAGAGGAGTTCCGAATGCAATACAGCCC	+
Preference number: 6 (lower is better) Translates to: VRRFIPHDQNLP*LGRGVPNAIQP Trigger: GGGCTGTATTGCATTCGGAACTCCTCTACCAAGTCAGGGAAGGTTTTGGTCGTGTGGGATGAATCTTCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS TCA 72 bp	GCTGAGAAGAACCATGTTCGGTGCTTCTTGCTGATGTaGATGATCTTGAATGGGAAGACATTGTTGGACGTG	+
Preference number: 6 (lower is better) Translates to: AEKNHVRCFLLM*MILNGKTLLDV Trigger: CACGTCCAACAATGTCTTCCCATTCAAGATCATTCACATCAGCAAGAAGCACCGAACATGGTTCTTCTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3
CDS TCA 72 bp	ATCTTCATGTTCGTAATCTTCATTGTCCATGGGATATaGAGACAGGCTGATATCTATAGGTCGCTCAACTGC	+
Preference number: 6 (lower is better) Translates to: IFMFVIFIVHGI*RQADIYRSLNC Trigger: GCAGTTGAGCGACCTATAGATATCAGCCTGTCTTCATATCCCATGGACAATGAAGATTACGAACATGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067638.14 ENSMUST00000101316.10 ENSMUST00000118545.8 ENSMUST00000179943.3

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu