Pregenerated sensors for SH2D7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046460Ensembl transcript IDs: ENSMUST00000060242.12, ENSMUST00000118413.3
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGGTGTGGAGGATGTaGCTCCTGGCGTCTCCCCCATCTCCTGGCAAGGCCATGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PKLLGLILLRQVWRM*LLASPPSPGKAMRK Trigger: CTTCCTCATGGCCTTGCCAGGAGATGGGGGAGACGCCAGGAGCCACATCCTCCACACCTGCCTCAGAAGGATTAAACCCAGGAGCTTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR CCA 90 bp | CTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGGTGTaGAGGATGTGGCTCCTGGCGTCTCCCCCATCTCCTGGCAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: LLYPKLLGLILLRQV*RMWLLASPPSPGKA Trigger: GGCCTTGCCAGGAGATGGGGGAGACGCCAGGAGCCACATCCTCCACACCTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR TCA 90 bp | GGGCAGGAAGGGCTGGGGGCGATTCTTAGGAGCCCAGCCTGCTGCTaGGTTAGGACCATGGCTTCTGAAGTTGGACCTTGGCTGCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: GQEGLGAILRSPACC*VRTMASEVGPWLLY Trigger: ATACAGCAGCCAAGGTCCAACTTCAGAAGCCATGGTCCTAACTCAGCAGCAGGCTGGGCTCCTAAGAATCGCCCCCAGCCCTTCCTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR CCA 90 bp | TGGGGGCGATTCTTAGGAGCCCAGCCTGCTGCTGAGTTAGGACCATaGCTTCTGAAGTTGGACCTTGGCTGCTGTATCCCAAGCTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: WGRFLGAQPAAELGP*LLKLDLGCCIPSSW Trigger: CCAGGAGCTTGGGATACAGCAGCCAAGGTCCAACTTCAGAAGCCATGGTCCTAACTCAGCAGCAGGCTGGGCTCCTAAGAATCGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR CCA 90 bp | CATACTGATGCTAGGATAAAGATGGAGAAGTGGGGCAGGAAGGGCTaGGGGCGATTCTTAGGAGCCCAGCCTGCTGCTGAGTTAGGACCA | + |
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Preference number: 1 (lower is better) Translates to: HTDARIKMEKWGRKG*GRFLGAQPAAELGP Trigger: TGGTCCTAACTCAGCAGCAGGCTGGGCTCCTAAGAATCGCCCCCAGCCCTTCCTGCCCCACTTCTCCATCTTTATCCTAGCATCAGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR GCA 90 bp | TACTTTCCCAATGTGAAGCTGTATAAGGTTCGGTCCAAAGGGCTCTaGCCCTGTGTCTTGAACACTACCCCACCCCACCTCCCTGATGAC | + |
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Preference number: 1 (lower is better) Translates to: YFPNVKLYKVRSKGL*PCVLNTTPPHLPDD Trigger: GTCATCAGGGAGGTGGGGTGGGGTAGTGTTCAAGACACAGGGGCAGAGCCCTTTGGACCGAACCTTATACAGCTTCACATTGGGAAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR CCA 90 bp | GGTTGGGTCACACCTTCAAGTGAGCTAAGAGTATCCAGTAATCCCTaGTGCAGTGTGGATACCACCAAACCCTCTGAGTGCCAGGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: GWVTPSSELRVSSNP*CSVDTTKPSECQAF Trigger: AAAGGCCTGGCACTCAGAGGGTTTGGTGGTATCCACACTGCACCAGGGATTACTGGATACTCTTAGCTCACTTGAAGGTGTGACCCAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR CCA 90 bp | ACTGGTGACTCCCAAAAGTCTCTAGAAGTGACATCGCCAGGTTCATaGTGGGTTGCATGGGAGGAATCTGAGCTGCTCCAAAGGTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: TGDSQKSLEVTSPGS*WVAWEESELLQRSG Trigger: TCCTGACCTTTGGAGCAGCTCAGATTCCTCCCATGCAACCCACCATGAACCTGGCGATGTCACTTCTAGAGACTTTTGGGAGTCACCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR GCA 90 bp | TCCTTCATTGTGTGGATGGACAGCATTGAAGAGACATCCTGGGGTTaGAGGCTGCTACAAAGTCTCTCCTGTGCCTTCCCAGATAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: SFIVWMDSIEETSWG*RLLQSLSCAFPDRY Trigger: GTACCTATCTGGGAAGGCACAGGAGAGACTTTGTAGCAGCCTGCAACCCCAGGATGTCTCTTCAATGCTGTCCATCCACACAATGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR TCA 90 bp | GATAGCAGGCCAGTTGCTTGCCCAATGGATTTGGGGACACATGGATaGAGGGGAACAGTACCAAATAAGAACAATCCCTGGAAGAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: DSRPVACPMDLGTHG*RGTVPNKNNPWKSQ Trigger: CTGGCTCTTCCAGGGATTGTTCTTATTTGGTACTGTTCCCCTTCATCCATGTGTCCCCAAATCCATTGGGCAAGCAACTGGCCTGCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR GCA 90 bp | GCTGTACATTCAGAGCTTAAGCCCCACTTATTGAGGGGATCTCTGTaGAGACCCTCACTAGCTATGTCTTCAAATAGGTGTCTGCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: AVHSELKPHLLRGSL*RPSLAMSSNRCLQH Trigger: GTGCTGCAGACACCTATTTGAAGACATAGCTAGTGAGGGTCTGCACAGAGATCCCCTCAATAAGTGGGGCTTAAGCTCTGAATGTACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR GCA 90 bp | TGCTCACATAAGCATGGCATCAGATATCCCCTGATTGGCTCCAGATaGTGCTCAGCTGTACATTCAGAGCTTAAGCCCCACTTATTGAGG | + |
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Preference number: 1 (lower is better) Translates to: CSHKHGIRYPLIGSR*CSAVHSELKPHLLR Trigger: CCTCAATAAGTGGGGCTTAAGCTCTGAATGTACAGCTGAGCAGCATCTGGAGCCAATCAGGGGATATCTGATGCCATGCTTATGTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | CATGGTGGGTTGCATGGGAGGAATCTGAGCTGCTCCAAAGGTCAGGACTGGCTGTGGGGCAGGAAGGGCTaGGGGCGATTCTTAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: HGGLHGRNLSCSKGQDWLWGRKG*GRFLGA Trigger: GGCTCCTAAGAATCGCCCCCAGCCCTTCCTGCCCCA...CAGCCAGTCCTGACCTTTGGAGCAGCTCAGATTCCTCCCATGCAACCCACCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | ACTACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCTGGGGCAGGAAGGGCTaGGGGCGATTCTTAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: TTPPHLPDDMVSLMCADLWGRKG*GRFLGA Trigger: GGCTCCTAAGAATCGCCCCCAGCCCTTCCTGCCCCA...GAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | GTTGGACCTTGGCTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGGGTATGAGGCGAGCTTaGTCAGTCAGCCCAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VGPWLLYPKLLGLILLRQGMRRA*SVSPGL Trigger: GAGGCCTGGGCTGACTGACCAAGCTCGCCTCATACC...CTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAGCCAAGGTCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | ACTACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCGTCTCCCCCATCTCCTaGCAAGGCCATGAGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: TTPPHLPDDMVSLMCADLVSPIS*QGHEEG Trigger: CCCTTCCTCATGGCCTTGCCAGGAGATGGGGGAGAC...GAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGCTTGGCCAAGGGAACAGCTGGAGCAAGAATGTCCTACTCCAAAACTGGAGCCCAGCCTGCTGCTaGGTTAGGACCATGGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SQLGQGNSWSKNVLLQNWSPACC*VRTMAS Trigger: AGAAGCCATGGTCCTAACTCAGCAGCAGGCTGGGCT...CCAGTTTTGGAGTAGGACATTCTTGCTCCAGCTGTTCCCTTGGCCAAGCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | CACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGATTTGGGAGGATGTGGCTCCTaGCGTCTCCCCCATCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: HPTSLMTWYHLCVLTSDLGGCGS*RLPHLL Trigger: CAGGAGATGGGGGAGACGCCAGGAGCCACATCCTCC...CAAATCTGAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | TCCAGATGCTGCTCAGCTGTACATTCAGAGCTTAAGCCCCACTTATTGAGGGGAGGAGGATGTGGCTCCTaGCGTCTCCCCCATCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SRCCSAVHSELKPHLLRGGGCGS*RLPHLL Trigger: CAGGAGATGGGGGAGACGCCAGGAGCCACATCCTCC...TCCCCTCAATAAGTGGGGCTTAAGCTCTGAATGTACAGCTGAGCAGCATCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR GCA 90 bp | GTTGGACCTTGGCTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGCCTGGGGTTGCAGGCTaGTACAAAGTCTCTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: VGPWLLYPKLLGLILLRQPGVAG*YKVSPV Trigger: CACAGGAGAGACTTTGTAGCAGCCTGCAACCCCAGG...CTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAGCCAAGGTCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTAGAGAGAAGATAGCAGGCCAGTTGCTTGCCCAATGGATTTGGGGACACCCTGGGGTTGCAGGCTaGTACAAAGTCTCTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: QGREKIAGQLLAQWIWGHPGVAG*YKVSPV Trigger: CACAGGAGAGACTTTGTAGCAGCCTGCAACCCCAGG...GTGTCCCCAAATCCATTGGGCAAGCAACTGGCCTGCTATCTTCTCTCTACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | CACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGATTTGGTCTCCCCCATCTCCTaGCAAGGCCATGAGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: HPTSLMTWYHLCVLTSDLVSPIS*QGHEEG Trigger: CCCTTCCTCATGGCCTTGCCAGGAGATGGGGGAGAC...CAAATCTGAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | TCCAGATGCTGCTCAGCTGTACATTCAGAGCTTAAGCCCCACTTATTGAGGGGACTTCTGAGGCAGGTGTaGAGGATGTGGCTCCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: SRCCSAVHSELKPHLLRGLLRQV*RMWLLA Trigger: CGCCAGGAGCCACATCCTCCACACCTGCCTCAGAAG...TCCCCTCAATAAGTGGGGCTTAAGCTCTGAATGTACAGCTGAGCAGCATCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGAAGGGGACTGTGGTCTTaGTTCCTGCCTCCTGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: TPPHLPDDMVSLMCADLRRGLWS*FLPPAC Trigger: ACAAGCAGGAGGCAGGAACCAAGACCACAGTCCCCT...TCTGAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCCATCTCCTGGCAAGGCCATGAGGAAGGGAACTGGTTTTGTTCTCAGAAGTGTGGATGGACAGCATTaGAGAGACATCCTGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: PPSPGKAMRKGTGFVLRSVDGQH*RDILGL Trigger: CAACCCCAGGATGTCTCTTCAATGCTGTCCATCCAC...ACTTCTGAGAACAAAACCAGTTCCCTTCCTCATGGCCTTGCCAGGAGATGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGCTTGGCCAAGGGAACAGCTGGAGCAAGAATGTCCTACTCCAAAACTGGGTGGATGGACAGCATTaGAGAGACATCCTGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SQLGQGNSWSKNVLLQNWVDGQH*RDILGL Trigger: CAACCCCAGGATGTCTCTTCAATGCTGTCCATCCAC...CCAGTTTTGGAGTAGGACATTCTTGCTCCAGCTGTTCCCTTGGCCAAGCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR GCA 90 bp | CCCCCATCTCCTGGCAAGGCCATGAGGAAGGGAACTGGTTTTGTTCTCAGAAGTGAGACATCCTGGGGTTaGAGGCTGCTACAAAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PPSPGKAMRKGTGFVLRSETSWG*RLLQSL Trigger: GAGACTTTGTAGCAGCCTGCAACCCCAGGATGTCTC...ACTTCTGAGAACAAAACCAGTTCCCTTCCTCATGGCCTTGCCAGGAGATGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGGTGTGGAGGATGAGACATCCTGGGGTTaGAGGCTGCTACAAAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: AAVSQAPGFNPSEAGVEDETSWG*RLLQSL Trigger: GAGACTTTGTAGCAGCCTGCAACCCCAGGATGTCTC...ATCCTCCACACCTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | CATGGTGGGTTGCATGGGAGGAATCTGAGCTGCTCCAAAGGTCAGGACTGGCTGACGTTCCATAGCAGATaGTTGGGTCACACCTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: HGGLHGRNLSCSKGQDWLTFHSR*LGHTFK Trigger: CTTGAAGGTGTGACCCAACCATCTGCTATGGAACGT...CAGCCAGTCCTGACCTTTGGAGCAGCTCAGATTCCTCCCATGCAACCCACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAAAAGTCTCTAGAAGTGACATCGCCAGGTTCATGGTGGGTTGCATGGGAGCATCAGATATCCCCTaGTTGGCTCCAGATGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LPKVSRSDIARFMVGCMGASDIP*LAPDAA Trigger: AGCAGCATCTGGAGCCAATCAGGGGATATCTGATGC...TCCCATGCAACCCACCATGAACCTGGCGATGTCACTTCTAGAGACTTTTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAAAAGTCTCTAGAAGTGACATCGCCAGGTTCATGGTGGGTTGCATGGGACAGGTAGGGGTGACCTaGTCACATAAGCATGGCATC | + |
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Preference number: 2 (lower is better) Translates to: LPKVSRSDIARFMVGCMGQVGVT*SHKHGI Trigger: GATGCCATGCTTATGTGAGCAGGTCACCCCTACCTG...TCCCATGCAACCCACCATGAACCTGGCGATGTCACTTCTAGAGACTTTTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | GTTGGACCTTGGCTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGGTATCCAGTAATCCCTaGTGCAGTGTGGATACCACC | + |
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Preference number: 2 (lower is better) Translates to: VGPWLLYPKLLGLILLRQVSSNP*CSVDTT Trigger: GGTGGTATCCACACTGCACCAGGGATTACTGGATAC...CTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAGCCAAGGTCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCCATCTCCTGGCAAGGCCATGAGGAAGGGAACTGGTTTTGTTCTCAGAAGTGGAAAATGTCTGTCTTaGCAAGGGACCTGCCACATA | + |
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Preference number: 2 (lower is better) Translates to: PPSPGKAMRKGTGFVLRSGKCLS*QGTCHI Trigger: TATGTGGCAGGTCCCTTGTCAAGACAGACATTTTCC...ACTTCTGAGAACAAAACCAGTTCCCTTCCTCATGGCCTTGCCAGGAGATGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAAAAGTCTCTAGAAGTGACATCGCCAGGTTCATGGTGGGTTGCATGGGATTAAGCCCCACTTATTaGGGGGATCTCTGTGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: LPKVSRSDIARFMVGCMGLSPTY*GDLCAD Trigger: GTCTGCACAGAGATCCCCTCAATAAGTGGGGCTTAA...TCCCATGCAACCCACCATGAACCTGGCGATGTCACTTCTAGAGACTTTTGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGAATTGAAGAGACATCCTaGGGTTGCAGGCTGCTACAA | + |
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Preference number: 2 (lower is better) Translates to: TPPHLPDDMVSLMCADLRIEETS*GCRLLQ Trigger: TTGTAGCAGCCTGCAACCCCAGGATGTCTCTTCAAT...TCTGAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGACAGTTGCTTGCCCAATaGATTTGGGGACACATGGAT | + |
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Preference number: 2 (lower is better) Translates to: TPPHLPDDMVSLMCADLRQLLAQ*IWGHMD Trigger: ATCCATGTGTCCCCAAATCCATTGGGCAAGCAACTG...TCTGAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR TCA 90 bp | CAGATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTACTCCTGGCAAGGCCATaGGGAAGGGAACTGGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: QMLTLASRCWVRIVSISLLLARP*GRELVL Trigger: CAAAACCAGTTCCCTTCCTCATGGCCTTGCCAGGAG...TAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR TCA 90 bp | ACTACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCCTACTCCAAAACTGGTaGCTCCCAAAAGTCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: TTPPHLPDDMVSLMCADLLLQNW*LPKVSR Trigger: TCTAGAGACTTTTGGGAGTCACCAGTTTTGGAGTAG...GAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGGTAGAGAGAAGATAGCAGGCCAGTTGCTTGCCCAATGGATTTGGGGACACCTACTCCAAAACTGGTaGCTCCCAAAAGTCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: QGREKIAGQLLAQWIWGHLLQNW*LPKVSR Trigger: TCTAGAGACTTTTGGGAGTCACCAGTTTTGGAGTAG...GTGTCCCCAAATCCATTGGGCAAGCAACTGGCCTGCTATCTTCTCTCTACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR GCA 90 bp | AGTCTTAAACTTTCCACCACCCCAAGTAGATGGGGACTTGTAGAGTTCAGAGGGAGCAGGCCAGTTGCTTaGCCAATGGATTTGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: SLKLSTTPSRWGLVEFRGSRPVA*PMDLGT Trigger: TGTCCCCAAATCCATTGGGCAAGCAACTGGCCTGCT...CCCTCTGAACTCTACAAGTCCCCATCTACTTGGGGTGGTGGAAAGTTTAAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR TCA 90 bp | ATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTAAAAAGCCCAGCCTGCTGCTaGGTTAGGACCATGGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: MLTLASRCWVRIVSISLKSPACC*VRTMAS Trigger: AGAAGCCATGGTCCTAACTCAGCAGCAGGCTGGGCT...TTTTAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR GCA 90 bp | CACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGATTTGATTGGCTCCAGATGCTaGTCAGCTGTACATTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: HPTSLMTWYHLCVLTSDLIGSRC*SAVHSE Trigger: CTCTGAATGTACAGCTGAGCAGCATCTGGAGCCAAT...CAAATCTGAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR GCA 90 bp | AGTCTTAAACTTTCCACCACCCCAAGTAGATGGGGACTTGTAGAGTTCAGAGGGTGTGGTCTTGGTTCCTaGCTCCTGCTTGTAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: SLKLSTTPSRWGLVEFRGCGLGS*LLLVET Trigger: TGTCTCTACAAGCAGGAGGCAGGAACCAAGACCACA...CCCTCTGAACTCTACAAGTCCCCATCTACTTGGGGTGGTGGAAAGTTTAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR-3UTR CCA 90 bp | CAGATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTAGGCCAAGGGAACAGCTaGAGCAAGAATGTCCTACTC | + |
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Preference number: 2 (lower is better) Translates to: QMLTLASRCWVRIVSISLGQGNS*SKNVLL Trigger: GAGTAGGACATTCTTGCTCCAGCTGTTCCCTTGGCC...TAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR CAA 90 bp | TCCAGATGCTGCTCAGCTGTACATTCAGAGCTTAAGCCCCACTTATaGAGGGGATCTCTGTGCAGACCCTCACTAGCTATGTCTTCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SRCCSAVHSELKPHL*RGSLCRPSLAMSSN Trigger: ATTTGAAGACATAGCTAGTGAGGGTCTGCACAGAGATCCCCTCAATAAGTGGGGCTTAAGCTCTGAATGTACAGCTGAGCAGCATCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTTAAACTTTCCACCACCCCAAGTAGATGGGGACTTGTAGAGTTCAGAGGGGGAAAATGTCTGTCTTaGCAAGGGACCTGCCACATA | + |
|
Preference number: 2 (lower is better) Translates to: SLKLSTTPSRWGLVEFRGGKCLS*QGTCHI Trigger: TATGTGGCAGGTCCCTTGTCAAGACAGACATTTTCC...CCCTCTGAACTCTACAAGTCCCCATCTACTTGGGGTGGTGGAAAGTTTAAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGGTGTGGAGGATTATTCCTTCATTGTGTaGATGGACAGCATTGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: AAVSQAPGFNPSEAGVEDYSFIV*MDSIEE Trigger: CTCTTCAATGCTGTCCATCCACACAATGAAGGAATA...ATCCTCCACACCTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAGCTTGGCCAAGGGAACAGCTGGAGCAAGAATGTCCTACTCCAAAACTGGTATTCCTTCATTGTGTaGATGGACAGCATTGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SQLGQGNSWSKNVLLQNWYSFIV*MDSIEE Trigger: CTCTTCAATGCTGTCCATCCACACAATGAAGGAATA...CCAGTTTTGGAGTAGGACATTCTTGCTCCAGCTGTTCCCTTGGCCAAGCTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGATTGTTTCCATTTCCCTAAAAATAGATTTGTCTACCTACAGAGAGCTCCTTCTGAGGCAGGTGTaGAGGATGTGGCTCCTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: VRIVSISLKIDLSTYRELLLRQV*RMWLLA Trigger: CGCCAGGAGCCACATCCTCCACACCTGCCTCAGAAG...GAGCTCTCTGTAGGTAGACAAATCTATTTTTAGGGAAATGGAAACAATCCTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTAACGTTCCATAGCAGATaGTTGGGTCACACCTTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: QMLTLASRCWVRIVSISLTFHSR*LGHTFK Trigger: CTTGAAGGTGTGACCCAACCATCTGCTATGGAACGT...TAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGATTGTTTCCATTTCCCTAAAAATAGATTTGTCTACCTACAGAGAGCTCCTGGAAGAGCCAGCTTaGCCAAGGGAACAGCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VRIVSISLKIDLSTYRELLEEPA*PREQLE Trigger: CTCCAGCTGTTCCCTTGGCCAAGCTGGCTCTTCCAG...GAGCTCTCTGTAGGTAGACAAATCTATTTTTAGGGAAATGGAAACAATCCTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTCAGAAGTAATAGCATGATGTCATTTAGACAATCTGGAAAATGTCTGTCTGGTATGAGGCGAGCTTaGTCAGTCAGCCCAGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: VLRSNSMMSFRQSGKCLSGMRRA*SVSPGL Trigger: GAGGCCTGGGCTGACTGACCAAGCTCGCCTCATACC...AGACAGACATTTTCCAGATTGTCTAAATGACATCATGCTATTACTTCTGAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CAA 90 bp | TCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTAAAAATAGATTaGTCTACCTACAGAGAGCTCACCATTGCTCGGCTCAGGGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SRCWVRIVSISLKID*STYRELTIARLRVF Trigger: GAAAACCCTGAGCCGAGCAATGGTGAGCTCTCTGTAGGTAGACAAATCTATTTTTAGGGAAATGGAAACAATCCTCACCCAACATCGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGATTGTTTCCATTTCCCTAAAAATAGATTTGTCTACCTACAGAGAGCTCCAGATATCCCCTGATTaGCTCCAGATGCTGCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VRIVSISLKIDLSTYRELQISPD*LQMLLS Trigger: GCTGAGCAGCATCTGGAGCCAATCAGGGGATATCTG...GAGCTCTCTGTAGGTAGACAAATCTATTTTTAGGGAAATGGAAACAATCCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGATTGTTTCCATTTCCCTAAAAATAGATTTGTCTACCTACAGAGAGCTCGTATCCAGTAATCCCTaGTGCAGTGTGGATACCACC | + |
|
Preference number: 2 (lower is better) Translates to: VRIVSISLKIDLSTYRELVSSNP*CSVDTT Trigger: GGTGGTATCCACACTGCACCAGGGATTACTGGATAC...GAGCTCTCTGTAGGTAGACAAATCTATTTTTAGGGAAATGGAAACAATCCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGATTGTTTCCATTTCCCTAAAAATAGATTTGTCTACCTACAGAGAGCTCCAGTTGCTTGCCCAATaGATTTGGGGACACATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: VRIVSISLKIDLSTYRELQLLAQ*IWGHMD Trigger: ATCCATGTGTCCCCAAATCCATTGGGCAAGCAACTG...GAGCTCTCTGTAGGTAGACAAATCTATTTTTAGGGAAATGGAAACAATCCTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR TCA 72 bp | GGGCTGGGGGCGATTCTTAGGAGCCCAGCCTGCTGCTaGGTTAGGACCATGGCTTCTGAAGTTGGACCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GLGAILRSPACC*VRTMASEVGPW Trigger: CCAAGGTCCAACTTCAGAAGCCATGGTCCTAACTCAGCAGCAGGCTGGGCTCCTAAGAATCGCCCCCAGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CCA 72 bp | CCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGGTGTaGAGGATGTGGCTCCTGGCGTCTCCCCCATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PKLLGLILLRQV*RMWLLASPPSP Trigger: AGGAGATGGGGGAGACGCCAGGAGCCACATCCTCCACACCTGCCTCAGAAGGATTAAACCCAGGAGCTTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR GCA 72 bp | CAGGTTCATGGTGGGTTGCATGGGAGGAATCTGAGCTaGTCCAAAGGTCAGGACTGGCTGGAGACAGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QVHGGLHGRNLS*SKGQDWLETEG Trigger: GCCCTCTGTCTCCAGCCAGTCCTGACCTTTGGAGCAGCTCAGATTCCTCCCATGCAACCCACCATGAACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CCA 72 bp | GTGGAGGATGTGGCTCCTGGCGTCTCCCCCATCTCCTaGCAAGGCCATGAGGAAGGGAACTGGTTTTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VEDVAPGVSPIS*QGHEEGNWFCS Trigger: AGAACAAAACCAGTTCCCTTCCTCATGGCCTTGCCAGGAGATGGGGGAGACGCCAGGAGCCACATCCTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGGTATGAGGCGAGCTaGGTCAGTCAGCCCAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TTPPHLPDDMVSLMCADLRYEAS*VSQPRP Trigger: AGGCCTGGGCTGACTGACCAAGCTCGCCTCATACCT...GAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR GCA 72 bp | CCAAATATCCACCAAGGAGTGGATTTCCCCACAGTGTaGACTGAGCTAGTTCTGCCCAGGGCCTGGGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PNIHQGVDFPTV*TELVLPRAWVE Trigger: CTCCACCCAGGCCCTGGGCAGAACTAGCTCAGTGCACACTGTGGGGAAATCCACTCCTTGGTGGATATTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTGGGTTGCATGGGAGGAATCTGAGCTGCTCCAAAGGTCAGGACTGGCTGAGAGACATCCTGGGGTaGCAGGCTGCTACAAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HGGLHGRNLSCSKGQDWLRDILG*QAATKS Trigger: AGACTTTGTAGCAGCCTGCAACCCCAGGATGTCTCT...CAGCCAGTCCTGACCTTTGGAGCAGCTCAGATTCCTCCCATGCAACCCACCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR GCA 72 bp | AGTCTCTCCTGTGCCTTCCCAGATAGGTACCTAGGCTaGATCCTGGAGCCACGTTCCATAGCAGATGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLSCAFPDRYLG*ILEPRSIADGW Trigger: CCAACCATCTGCTATGGAACGTGGCTCCAGGATGCAGCCTAGGTACCTATCTGGGAAGGCACAGGAGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCCAGCTTGGCCAAGGGAACAGCTGGAGCAAGAATGTCCTACTCCAAAACTGGCAGGTTCATGGTGGGTaGCATGGGAGGAATCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SQLGQGNSWSKNVLLQNWQVHGG*HGRNLS Trigger: GCTCAGATTCCTCCCATGCAACCCACCATGAACCTG...CCAGTTTTGGAGTAGGACATTCTTGCTCCAGCTGTTCCCTTGGCCAAGCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR GCA 72 bp | GTGTGGATGGACAGCATTGAAGAGACATCCTGGGGTTaGAGGCTGCTACAAAGTCTCTCCTGTGCCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VWMDSIEETSWG*RLLQSLSCAFP Trigger: TGGGAAGGCACAGGAGAGACTTTGTAGCAGCCTGCAACCCCAGGATGTCTCTTCAATGCTGTCCATCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR GCA 72 bp | AATGTGAAGCTGTATAAGGTTCGGTCCAAAGGGCTCTaGCCCTGTGTCTTGAACACTACCCCACCCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: NVKLYKVRSKGL*PCVLNTTPPHL Trigger: GAGGTGGGGTGGGGTAGTGTTCAAGACACAGGGGCAGAGCCCTTTGGACCGAACCTTATACAGCTTCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CCA 72 bp | CCCCCTCTTGCCAGCCTTATTCCTTCATTGTGTGGATaGACAGCATTGAAGAGACATCCTGGGGTTGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PPLASLIPSLCG*TALKRHPGVAG Trigger: GCCTGCAACCCCAGGATGTCTCTTCAATGCTGTCCATCCACACAATGAAGGAATAAGGCTGGCAAGAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CCA 72 bp | TTCTTAGGAGCCCAGCCTGCTGCTGAGTTAGGACCATaGCTTCTGAAGTTGGACCTTGGCTGCTGTATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FLGAQPAAELGP*LLKLDLGCCIP Trigger: TGGGATACAGCAGCCAAGGTCCAACTTCAGAAGCCATGGTCCTAACTCAGCAGCAGGCTGGGCTCCTAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR TCA 72 bp | AAGGGACCTGCCACATACTTGTTAAGTATCGAGGTATaGGGCGAGCTTGGTCAGTCAGCCCAGGCCTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KGPATYLLSIEV*GELGQSAQASS Trigger: TGAAGAGGCCTGGGCTGACTGACCAAGCTCGCCTCATACCTCGATACTTAACAAGTATGTGGCAGGTCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR GCA 72 bp | TGGACAGCATTGAAGAGACATCCTGGGGTTGCAGGCTaGTACAAAGTCTCTCCTGTGCCTTCCCAGATAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WTALKRHPGVAG*YKVSPVPSQIG Trigger: ACCTATCTGGGAAGGCACAGGAGAGACTTTGTAGCAGCCTGCAACCCCAGGATGTCTCTTCAATGCTGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGACTTAAGCCCCACTTATaGAGGGGATCTCTGTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TPPHLPDDMVSLMCADLRLKPHL*RGSLCR Trigger: TCTGCACAGAGATCCCCTCAATAAGTGGGGCTTAAG...TCTGAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTAGAGGGGACTGTGGTCTaGGTTCCTGCCTCCTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QMLTLASRCWVRIVSISLEGTVV*VPASCL Trigger: CAAGCAGGAGGCAGGAACCAAGACCACAGTCCCCTC...TAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR GCA 72 bp | CCTTCAAGTGAGCTAAGAGTATCCAGTAATCCCTGGTaGAGTGTGGATACCACCAAACCCTCTGAGTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PSSELRVSSNPW*SVDTTKPSECQ Trigger: CTGGCACTCAGAGGGTTTGGTGGTATCCACACTGCACCAGGGATTACTGGATACTCTTAGCTCACTTGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CCA 72 bp | TTCATTGTGTGGATGGACAGCATTGAAGAGACATCCTaGGGTTGCAGGCTGCTACAAAGTCTCTCCTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: FIVWMDSIEETS*GCRLLQSLSCA Trigger: GGCACAGGAGAGACTTTGTAGCAGCCTGCAACCCCAGGATGTCTCTTCAATGCTGTCCATCCACACAATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CCA 72 bp | CACATACTTGTTAAGTATCGAGGTATGAGGCGAGCTTaGTCAGTCAGCCCAGGCCTCTTCACGTTCATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: HILVKYRGMRRA*SVSPGLFTFIH Trigger: GTGGATGAACGTGAAGAGGCCTGGGCTGACTGACCAAGCTCGCCTCATACCTCGATACTTAACAAGTATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CCA 72 bp | CAAAAGTCTCTAGAAGTGACATCGCCAGGTTCATGGTaGGTTGCATGGGAGGAATCTGAGCTGCTCCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QKSLEVTSPGSW*VAWEESELLQR Trigger: CCTTTGGAGCAGCTCAGATTCCTCCCATGCAACCCACCATGAACCTGGCGATGTCACTTCTAGAGACTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CCA 72 bp | GGTAGAGAGAAGATAGCAGGCCAGTTGCTTGCCCAATaGATTTGGGGACACATGGATGAAGGGGAACAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GREKIAGQLLAQ*IWGHMDEGEQY Trigger: GTACTGTTCCCCTTCATCCATGTGTCCCCAAATCCATTGGGCAAGCAACTGGCCTGCTATCTTCTCTCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTAAAAGAGGGGACTGTGGTCTaGGTTCCTGCCTCCTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: MLTLASRCWVRIVSISLKEGTVV*VPASCL Trigger: CAAGCAGGAGGCAGGAACCAAGACCACAGTCCCCTC...TTTTAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR TCA 72 bp | CCAGCCTTATTCCTTCATTGTGTGGATGGACAGCATTaGAGAGACATCCTGGGGTTGCAGGCTGCTACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PALFLHCVDGQH*RDILGLQAATK Trigger: CTTTGTAGCAGCCTGCAACCCCAGGATGTCTCTTCAATGCTGTCCATCCACACAATGAAGGAATAAGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR GCA 72 bp | CATGGCATCAGATATCCCCTGATTGGCTCCAGATGCTaGTCAGCTGTACATTCAGAGCTTAAGCCCCACTTA | + |
|
Preference number: 3 (lower is better) Translates to: HGIRYPLIGSRC*SAVHSELKPHL Trigger: TAAGTGGGGCTTAAGCTCTGAATGTACAGCTGAGCAGCATCTGGAGCCAATCAGGGGATATCTGATGCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CCA 72 bp | ACACCTTCAAGTGAGCTAAGAGTATCCAGTAATCCCTaGTGCAGTGTGGATACCACCAAACCCTCTGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TPSSELRVSSNP*CSVDTTKPSEC Trigger: GCACTCAGAGGGTTTGGTGGTATCCACACTGCACCAGGGATTACTGGATACTCTTAGCTCACTTGAAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CCA 72 bp | TTAACAAGCTATGCAATCTTTTACCAAAGCCAAGGCTaGGCTGTACCACCTCCGCCCCCGTACTTTCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LTSYAIFYQSQG*AVPPPPPYFPN Trigger: ATTGGGAAAGTACGGGGGCGGAGGTGGTACAGCCCAGCCTTGGCTTTGGTAAAAGATTGCATAGCTTGTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGAGGAAGGGAACTGGTTTaGTTCTCAGAAGTAATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TPPHLPDDMVSLMCADLRGRELV*FSEVIA Trigger: TGCTATTACTTCTGAGAACAAAACCAGTTCCCTTCC...TCTGAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTACCATGGCTTCTGAAGTaGGACCTTGGCTGCTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: QMLTLASRCWVRIVSISLPWLLK*DLGCCI Trigger: GATACAGCAGCCAAGGTCCAACTTCAGAAGCCATGG...TAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR TCA 72 bp | AACAGCTGGAGCAAGAATGTCCTACTCCAAAACTGGTaGCTCCCAAAAGTCTCTAGAAGTGACATCGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: NSWSKNVLLQNW*LPKVSRSDIAR Trigger: CCTGGCGATGTCACTTCTAGAGACTTTTGGGAGTCACCAGTTTTGGAGTAGGACATTCTTGCTCCAGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR TCA 72 bp | CCAGTTGCTTGCCCAATGGATTTGGGGACACATGGATaGAGGGGAACAGTACCAAATAAGAACAATCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PVACPMDLGTHG*RGTVPNKNNPW Trigger: CCAGGGATTGTTCTTATTTGGTACTGTTCCCCTTCATCCATGTGTCCCCAAATCCATTGGGCAAGCAACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CCA 72 bp | GAGAAGATAGCAGGCCAGTTGCTTGCCCAATGGATTTaGGGACACATGGATGAAGGGGAACAGTACCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: EKIAGQLLAQWI*GHMDEGEQYQI Trigger: TATTTGGTACTGTTCCCCTTCATCCATGTGTCCCCAAATCCATTGGGCAAGCAACTGGCCTGCTATCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGGATTGTTTCCATTTCCCTAAAAATAGATTTGTCTACCTACAGAGAGCTCAGGTATGAGGCGAGCTaGGTCAGTCAGCCCAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VRIVSISLKIDLSTYRELRYEAS*VSQPRP Trigger: AGGCCTGGGCTGACTGACCAAGCTCGCCTCATACCT...GAGCTCTCTGTAGGTAGACAAATCTATTTTTAGGGAAATGGAAACAATCCTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR GCA 72 bp | TCAGAGCTTAAGCCCCACTTATTGAGGGGATCTCTGTaGAGACCCTCACTAGCTATGTCTTCAAATAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SELKPHLLRGSL*RPSLAMSSNRC Trigger: ACACCTATTTGAAGACATAGCTAGTGAGGGTCTGCACAGAGATCCCCTCAATAAGTGGGGCTTAAGCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGATTTGGAAATAAAACACTTTTaGTGTGCTGCACTCACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HPTSLMTWYHLCVLTSDLEIKHF*CAALTL Trigger: GAGAGTGAGTGCAGCACACAAAAAGTGTTTTATTTC...CAAATCTGAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR GCA 72 bp | AAAAATAGATTTGTCTACCTACAGAGAGCTCACCATTaGTCGGCTCAGGGTTTTCCTGCTAGTCTTAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: KNRFVYLQRAHH*SAQGFPASLKL Trigger: AAGTTTAAGACTAGCAGGAAAACCCTGAGCCGAGCAATGGTGAGCTCTCTGTAGGTAGACAAATCTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTCAGAAGTAATAGCATGATGTCATTTAGACAATCTGGAAAATGTCTGTCTTGTGGATGGACAGCATaGAAGAGACATCCTGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VLRSNSMMSFRQSGKCLSCGWTA*KRHPGV Trigger: AACCCCAGGATGTCTCTTCAATGCTGTCCATCCACA...AGACAGACATTTTCCAGATTGTCTAAATGACATCATGCTATTACTTCTGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR TCA 72 bp | ATGATGTCATTTAGACAATCTGGAAAATGTCTGTCTTaGCAAGGGACCTGCCACATACTTGTTAAGTATCGA | + |
|
Preference number: 3 (lower is better) Translates to: MMSFRQSGKCLS*QGTCHILVKYR Trigger: TCGATACTTAACAAGTATGTGGCAGGTCCCTTGTCAAGACAGACATTTTCCAGATTGTCTAAATGACATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | GTTGGACCTTGGCTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGGGCCCGCCCACCCCCTaGCTCCTCCAGTGCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGPWLLYPKLLGLILLRQGPPTP*LLQCLA Trigger: GGCAAGGCACTGGAGGAGGCAGGGGGTGGGCGGGCC...CTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAGCCAAGGTCCAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | AGTTGGAGAGGGGACTGTGGTCTTGGTTCCTGCCTCCTGCTTGTAGAGACAGGGCAGGAAGGCGGGGACTaGTGGCCTTGTCAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SWRGDCGLGSCLLLVETGQEGGD*WPCQGA Trigger: TGCTCCCTGACAAGGCCACCAGTCCCCGCCTTCCTG...CCCTGTCTCTACAAGCAGGAGGCAGGAACCAAGACCACAGTCCCCTCTCCAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR TCA 90 bp | ACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGACAGCAGAAGCTGGCCTaGGCGTGCCCCACACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPPHLPDDMVSLMCADLRQQKLA*ACPTPL Trigger: CAGAGGTGTGGGGCACGCTCAGGCCAGCTTCTGCTG...TCTGAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | TTAGGAGCCCAGCCTGCTGCTGAGTTAGGACCATGGCTTCTGAAGTTGGACCTTTCCCTGAGGGCTCCCTaGCTGGGGAACAAGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGAQPAAELGPWLLKLDLSLRAP*LGNKPS Trigger: GCTTGGCTTGTTCCCCAGGCAGGGAGCCCTCAGGGA...AAGGTCCAACTTCAGAAGCCATGGTCCTAACTCAGCAGCAGGCTGGGCTCCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | CAGGGTAGAGAGAAGATAGCAGGCCAGTTGCTTGCCCAATGGATTTGGGGACACCCCTGCCTCCTCCAGTaGCTTGCCCAGATGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGREKIAGQLLAQWIWGHPCLLQ*LAQMEL Trigger: CAGCTCCATCTGGGCAAGGCACTGGAGGAGGCAGGG...GTGTCCCCAAATCCATTGGGCAAGCAACTGGCCTGCTATCTTCTCTCTACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | CCCCCATCTCCTGGCAAGGCCATGAGGAAGGGAACTGGTTTTGTTCTCAGAAGTGAAGGCGGGGACTGGTaGCCTTGTCAGGGAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PPSPGKAMRKGTGFVLRSEGGDW*PCQGAC Trigger: GCATGCTCCCTGACAAGGCCACCAGTCCCCGCCTTC...ACTTCTGAGAACAAAACCAGTTCCCTTCCTCATGGCCTTGCCAGGAGATGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR TCA 90 bp | CCCCCATCTCCTGGCAAGGCCATGAGGAAGGGAACTGGTTTTGTTCTCAGAAGTGCTTCAGAGGAGGACTaGGCCTCGTGGCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPSPGKAMRKGTGFVLRSASEED*ASWLSF Trigger: GAAGCTGAGCCACGAGGCTCAGTCCTCCTCTGAAGC...ACTTCTGAGAACAAAACCAGTTCCCTTCCTCATGGCCTTGCCAGGAGATGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | CTCCCAAAAGTCTCTAGAAGTGACATCGCCAGGTTCATGGTGGGTTGCATGGGATCCCTGAGGGCTCCCTaGCTGGGGAACAAGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPKVSRSDIARFMVGCMGSLRAP*LGNKPS Trigger: GCTTGGCTTGTTCCCCAGGCAGGGAGCCCTCAGGGA...TCCCATGCAACCCACCATGAACCTGGCGATGTCACTTCTAGAGACTTTTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | CATCCTGGGGTTGCAGGCTGCTACAAAGTCTCTCCTGTGCCTTCCCAGATAGGTCAGGGTATGAGAGCTTaGCAGTGCCATGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPGVAGCYKVSPVPSQIGQGMRA*QCHASR Trigger: CCTGCTGGCATGGCACTGCCAAGCTCTCATACCCTG...ACCTATCTGGGAAGGCACAGGAGAGACTTTGTAGCAGCCTGCAACCCCAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | CATGGTGGGTTGCATGGGAGGAATCTGAGCTGCTCCAAAGGTCAGGACTGGCTGTTCAGAGCCAGCTCTTaGATTTCAGCCAAGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HGGLHGRNLSCSKGQDWLFRASS*ISAKAR Trigger: GCGGGCCTTGGCTGAAATCCAAGAGCTGGCTCTGAA...CAGCCAGTCCTGACCTTTGGAGCAGCTCAGATTCCTCCCATGCAACCCACCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR TCA 90 bp | CTCCCAAAAGTCTCTAGAAGTGACATCGCCAGGTTCATGGTGGGTTGCATGGGAGCTTCAGAGGAGGACTaGGCCTCGTGGCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPKVSRSDIARFMVGCMGASEED*ASWLSF Trigger: GAAGCTGAGCCACGAGGCTCAGTCCTCCTCTGAAGC...TCCCATGCAACCCACCATGAACCTGGCGATGTCACTTCTAGAGACTTTTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | ACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGAGACGTCACTGGGGCCTaGAGGAGACTCATCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPPHLPDDMVSLMCADLRDVTGA*RRLIQK Trigger: CTTCTGGATGAGTCTCCTGCAGGCCCCAGTGACGTC...TCTGAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | CATGGTGGGTTGCATGGGAGGAATCTGAGCTGCTCCAAAGGTCAGGACTGGCTGATGAGAGCTTGGCAGTaGCATGCCAGCAGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGGLHGRNLSCSKGQDWLMRAWQ*HASRLE Trigger: TTCCAACCTGCTGGCATGGCACTGCCAAGCTCTCAT...CAGCCAGTCCTGACCTTTGGAGCAGCTCAGATTCCTCCCATGCAACCCACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | GTTGGACCTTGGCTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGTGCAGGAAAGAGACCTaGGGCTTTGCAGGAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGPWLLYPKLLGLILLRQCRKET*GFAGRR Trigger: CCGCCTTCCTGCAAAGCCCCAGGTCTCTTTCCTGCA...CTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAGCCAAGGTCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | CATGGTGGGTTGCATGGGAGGAATCTGAGCTGCTCCAAAGGTCAGGACTGGCTGCTCCAAGTAGTAGCCTaGGATCCCAGGGTCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGGLHGRNLSCSKGQDWLLQVVA*DPRVSE Trigger: TTCTGAGACCCTGGGATCCCAGGCTACTACTTGGAG...CAGCCAGTCCTGACCTTTGGAGCAGCTCAGATTCCTCCCATGCAACCCACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | GTTGGACCTTGGCTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGCAGGGTATGAGAGCTTaGCAGTGCCATGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGPWLLYPKLLGLILLRQQGMRA*QCHASR Trigger: CCTGCTGGCATGGCACTGCCAAGCTCTCATACCCTG...CTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAGCCAAGGTCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CAA 72 bp | CAGCCTGCTGCTGAGTTAGGACCATGGCTTCTGAAGTaGGACCTTGGCTGCTGTATCCCAAGCTCCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QPAAELGPWLLK*DLGCCIPSSWV Trigger: AACCCAGGAGCTTGGGATACAGCAGCCAAGGTCCAACTTCAGAAGCCATGGTCCTAACTCAGCAGCAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR TCA 90 bp | CATCCTGGGGTTGCAGGCTGCTACAAAGTCTCTCCTGTGCCTTCCCAGATAGGTGCTGGAGGCCCGTGTTaGTGGCATCATACAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: HPGVAGCYKVSPVPSQIGAGGPC*WHHTDH Trigger: ATGATCTGTATGATGCCATCAACACGGGCCTCCAGC...ACCTATCTGGGAAGGCACAGGAGAGACTTTGTAGCAGCCTGCAACCCCAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | CAGATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTATGCCCCACACCTCTGTaGCCAGGCCTAGCTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QMLTLASRCWVRIVSISLCPTPL*PGLAVP Trigger: GGGCACAGCTAGGCCTGGGCACAGAGGTGTGGGGCA...TAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | CTCCCAAAAGTCTCTAGAAGTGACATCGCCAGGTTCATGGTGGGTTGCATGGGATCATCCAGGGTGCTGTaGCTGAGGGTGTCTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPKVSRSDIARFMVGCMGSSRVL*LRVSPE Trigger: CTCAGGAGACACCCTCAGCCACAGCACCCTGGATGA...TCCCATGCAACCCACCATGAACCTGGCGATGTCACTTCTAGAGACTTTTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR TCA 90 bp | TCCAGATGCTGCTCAGCTGTACATTCAGAGCTTAAGCCCCACTTATTGAGGGGAGGGCCTGTGTCTCCATaGACCACTTCAGAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRCCSAVHSELKPHLLRGGPVSP*TTSEPA Trigger: AGCTGGCTCTGAAGTGGTTCATGGAGACACAGGCCC...TCCCCTCAATAAGTGGGGCTTAAGCTCTGAATGTACAGCTGAGCAGCATCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | TCCAGATGCTGCTCAGCTGTACATTCAGAGCTTAAGCCCCACTTATTGAGGGGAGGTCTGGTCTGTCCCTaGCCTCTTGTTGTAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRCCSAVHSELKPHLLRGGLVCP*PLVVGL Trigger: CAGGCCTACAACAAGAGGCCAGGGACAGACCAGACC...TCCCCTCAATAAGTGGGGCTTAAGCTCTGAATGTACAGCTGAGCAGCATCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | GTTGGACCTTGGCTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGCAGTGTCCTTGTTCTTaGCGGCTGGGATCTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGPWLLYPKLLGLILLRQQCPCS*RLGSAH Trigger: ATGAGCAGATCCCAGCCGCCAAGAACAAGGACACTG...CTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAGCCAAGGTCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR TCA 90 bp | CAGATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTACCAGGGTGCTGTGGCTaGGGGTGTCTCCTGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: QMLTLASRCWVRIVSISLPGCCG*GCLLRQ Trigger: TTGTCTCAGGAGACACCCTCAGCCACAGCACCCTGG...TAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGGTGTGGAGGATGGTATCTGTAGAGCTTaGTTCAGAGGAGGACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAVSQAPGFNPSEAGVEDGICRA*FRGGLS Trigger: GCTCAGTCCTCCTCTGAAGCAAGCTCTACAGATACC...ATCCTCCACACCTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | GTTGGACCTTGGCTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGGGTATCTGTAGAGCTTaGTTCAGAGGAGGACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGPWLLYPKLLGLILLRQGICRA*FRGGLS Trigger: GCTCAGTCCTCCTCTGAAGCAAGCTCTACAGATACC...CTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAGCCAAGGTCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | ACTACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCCTTAGATTAGTGTGCTaGAGGCCCGTGTTGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TTPPHLPDDMVSLMCADLLRLVC*RPVLMA Trigger: TGCCATCAACACGGGCCTCCAGCACACTAATCTAAG...GAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR TCA 90 bp | TTAGACAATCTGGAAAATGTCTGTCTTGACAAGGGACCTGCCACATACTTGTTACAGCAGAAGCTGGCCTaGGCGTGCCCCACACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDNLENVCLDKGPATYLLQQKLA*ACPTPL Trigger: CAGAGGTGTGGGGCACGCTCAGGCCAGCTTCTGCTG...TAACAAGTATGTGGCAGGTCCCTTGTCAAGACAGACATTTTCCAGATTGTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR TCA 90 bp | AGTCTTAAACTTTCCACCACCCCAAGTAGATGGGGACTTGTAGAGTTCAGAGGGCGAGGGCTTTGTCCCTaGGTAGCTGCTCTGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLKLSTTPSRWGLVEFRGRGLCP*VAALFA Trigger: AGCAAACAGAGCAGCTACTCAGGGACAAAGCCCTCG...CCCTCTGAACTCTACAAGTCCCCATCTACTTGGGGTGGTGGAAAGTTTAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | CAGATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTAGGTCTGGTCTGTCCCTaGCCTCTTGTTGTAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QMLTLASRCWVRIVSISLGLVCP*PLVVGL Trigger: CAGGCCTACAACAAGAGGCCAGGGACAGACCAGACC...TAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | TTAGACAATCTGGAAAATGTCTGTCTTGACAAGGGACCTGCCACATACTTGTTACAGGAAGGCGGGGACTaGTGGCCTTGTCAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LDNLENVCLDKGPATYLLQEGGD*WPCQGA Trigger: TGCTCCCTGACAAGGCCACCAGTCCCCGCCTTCCTG...TAACAAGTATGTGGCAGGTCCCTTGTCAAGACAGACATTTTCCAGATTGTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CAA 72 bp | GCCAGCCTTATTCCTTCATTGTGTGGATGGACAGCATaGAAGAGACATCCTGGGGTTGCAGGCTGCTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASLIPSLCGWTA*KRHPGVAGCYK Trigger: TTTGTAGCAGCCTGCAACCCCAGGATGTCTCTTCAATGCTGTCCATCCACACAATGAAGGAATAAGGCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CAA 72 bp | TGCTCAGCTGTACATTCAGAGCTTAAGCCCCACTTATaGAGGGGATCTCTGTGCAGACCCTCACTAGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: CSAVHSELKPHL*RGSLCRPSLAM Trigger: CATAGCTAGTGAGGGTCTGCACAGAGATCCCCTCAATAAGTGGGGCTTAAGCTCTGAATGTACAGCTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| 3UTR CAA 72 bp | CAGTACCAAATAAGAACAATCCCTGGAAGAGCCAGCTaGGCCAAGGGAACAGCTGGAGCAAGAATGTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QYQIRTIPGRAS*AKGTAGARMSY Trigger: GTAGGACATTCTTGCTCCAGCTGTTCCCTTGGCCAAGCTGGCTCTTCCAGGGATTGTTCTTATTTGGTACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | ATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTAAAAGACGTCACTGGGGCCTaGAGGAGACTCATCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MLTLASRCWVRIVSISLKDVTGA*RRLIQK Trigger: CTTCTGGATGAGTCTCCTGCAGGCCCCAGTGACGTC...TTTTAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | AGTCTTAAACTTTCCACCACCCCAAGTAGATGGGGACTTGTAGAGTTCAGAGGGTTGTCCCTGAGTAGCTaGTCTGTTTGCTTGCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLKLSTTPSRWGLVEFRGLSLSS*SVCLRV Trigger: CACTCGCAAGCAAACAGAGCAGCTACTCAGGGACAA...CCCTCTGAACTCTACAAGTCCCCATCTACTTGGGGTGGTGGAAAGTTTAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | ATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTAAAATGCAGGAAAGAGACCTaGGGCTTTGCAGGAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MLTLASRCWVRIVSISLKCRKET*GFAGRR Trigger: CCGCCTTCCTGCAAAGCCCCAGGTCTCTTTCCTGCA...TTTTAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | CAGATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTACAGTGTCCTTGTTCTTaGCGGCTGGGATCTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QMLTLASRCWVRIVSISLQCPCS*RLGSAH Trigger: ATGAGCAGATCCCAGCCGCCAAGAACAAGGACACTG...TAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | ACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAGATGCTGGGAAATTCTGTaGCTGGAATTTTCAGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TPPHLPDDMVSLMCADLRCWEIL*LEFSGL Trigger: TAAGCCTGAAAATTCCAGCCACAGAATTTCCCAGCA...TCTGAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | TTAGACAATCTGGAAAATGTCTGTCTTGACAAGGGACCTGCCACATACTTGTTATCTAGGGCTTTCTTGTaGAGGAAAGAGACCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDNLENVCLDKGPATYLLSRAFL*RKETWG Trigger: GCCCCAGGTCTCTTTCCTGCACAAGAAAGCCCTAGA...TAACAAGTATGTGGCAGGTCCCTTGTCAAGACAGACATTTTCCAGATTGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
||
| CDS-3UTR GCA 90 bp | TTAGACAATCTGGAAAATGTCTGTCTTGACAAGGGACCTGCCACATACTTGTTACCTTGTCAGGGAGCATaGTGGGAAATTCTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDNLENVCLDKGPATYLLPCQGA*WEILWL Trigger: CAGCCACAGAATTTCCCAGCATGCTCCCTGACAAGG...TAACAAGTATGTGGCAGGTCCCTTGTCAAGACAGACATTTTCCAGATTGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
||
| CDS-3UTR CCA 90 bp | ATGCTAACGTTGGCTTCACGATGTTGGGTGAGGATTGTTTCCATTTCCCTAAAACTTGTTCTTGGCGGCTaGGATCTGCTCATAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MLTLASRCWVRIVSISLKLVLGG*DLLIGV Trigger: AACACCTATGAGCAGATCCCAGCCGCCAAGAACAAG...TTTTAGGGAAATGGAAACAATCCTCACCCAACATCGTGAAGCCAACGTTAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS-3UTR GCA 90 bp | GTGAGGATTGTTTCCATTTCCCTAAAAATAGATTTGTCTACCTACAGAGAGCTCTCTAGGGCTTTCTTGTaGAGGAAAGAGACCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VRIVSISLKIDLSTYRELSRAFL*RKETWG Trigger: GCCCCAGGTCTCTTTCCTGCACAAGAAAGCCCTAGA...GAGCTCTCTGTAGGTAGACAAATCTATTTTTAGGGAAATGGAAACAATCCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS-3UTR GCA 90 bp | GTGAGGATTGTTTCCATTTCCCTAAAAATAGATTTGTCTACCTACAGAGAGCTCATGAGAGCTTGGCAGTaGCATGCCAGCAGGTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: VRIVSISLKIDLSTYRELMRAWQ*HASRLE Trigger: TTCCAACCTGCTGGCATGGCACTGCCAAGCTCTCAT...GAGCTCTCTGTAGGTAGACAAATCTATTTTTAGGGAAATGGAAACAATCCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS-3UTR CCA 90 bp | GTGAGGATTGTTTCCATTTCCCTAAAAATAGATTTGTCTACCTACAGAGAGCTCTGGTTGATGACAAAATaGCGGCAGCGATCACTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VRIVSISLKIDLSTYRELWLMTK*RQRSLP Trigger: GGGCAGTGATCGCTGCCGCCATTTTGTCATCAACCA...GAGCTCTCTGTAGGTAGACAAATCTATTTTTAGGGAAATGGAAACAATCCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS-3UTR CCA 90 bp | TTAGACAATCTGGAAAATGTCTGTCTTGACAAGGGACCTGCCACATACTTGTTACGTCGATTTCGCAGCTaGTTGATGACAAAATGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LDNLENVCLDKGPATYLLRRFRS*LMTKWR Trigger: CCGCCATTTTGTCATCAACCAGCTGCGAAATCGACG...TAACAAGTATGTGGCAGGTCCCTTGTCAAGACAGACATTTTCCAGATTGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| 3UTR CAA 72 bp | TGGGTGAGGATTGTTTCCATTTCCCTAAAAATAGATTaGTCTACCTACAGAGAGCTCACCATTGCTCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: WVRIVSISLKID*STYRELTIARL Trigger: GAGCCGAGCAATGGTGAGCTCTCTGTAGGTAGACAAATCTATTTTTAGGGAAATGGAAACAATCCTCACCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| 3UTR CAA 72 bp | CCTCAGATTTGTGAACTCCTAGAAATAAAACACTTTTaGTGTGCTGCACTCACTCTCCGTGTCTGTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: PQICELLEIKHF*CAALTLRVCQH Trigger: ATGCTGACAGACACGGAGAGTGAGTGCAGCACACAAAAAGTGTTTTATTTCTAGGAGTTCACAAATCTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS-3UTR CCA 90 bp | GTTCTCAGAAGTAATAGCATGATGTCATTTAGACAATCTGGAAAATGTCTGTCTCTTGTTCTTGGCGGCTaGGATCTGCTCATAGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VLRSNSMMSFRQSGKCLSLVLGG*DLLIGV Trigger: AACACCTATGAGCAGATCCCAGCCGCCAAGAACAAG...AGACAGACATTTTCCAGATTGTCTAAATGACATCATGCTATTACTTCTGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS GCA 90 bp | CTTCAGAGCCAGCTCTTGGATTTCAGCCAAGGCCCGCCCACCCCCTaGCTCCTCCAGTGCCTTGCCCAGATGGAGCTGCTCTGGGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: LQSQLLDFSQGPPTP*LLQCLAQMELLWAA Trigger: GGCGGCCCAGAGCAGCTCCATCTGGGCAAGGCACTGGAGGAGGCAGGGGGTGGGCGGGCCTTGGCTGAAATCCAAGAGCTGGCTCTGAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS CCA 90 bp | GACCGGGAACTCATGTCTAGGGCTTTCTTGTGCAGGAAAGAGACCTaGGGCTTTGCAGGAAGGCGGGGACTGGTGGCCTTGTCAGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: DRELMSRAFLCRKET*GFAGRRGLVALSGS Trigger: GCTCCCTGACAAGGCCACCAGTCCCCGCCTTCCTGCAAAGCCCCAGGTCTCTTTCCTGCACAAGAAAGCCCTAGACATGAGTTCCCGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS TCA 90 bp | GCACCTCCTGGTAATGGCGTAGGAGCTCATCCAGGGTGCTGTGGCTaGGGGTGTCTCCTGAGACAAGGTAACGTCGATTTCGCAGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: APPGNGVGAHPGCCG*GCLLRQGNVDFAAG Trigger: ACCAGCTGCGAAATCGACGTTACCTTGTCTCAGGAGACACCCTCAGCCACAGCACCCTGGATGAGCTCCTACGCCATTACCAGGAGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS GCA 90 bp | GCTTGGCAGTGCCATGCCAGCAGGTTGGAATCTGCTCGTAAGGACTaGCTCTTTGGTCTGGTCTGTCCCTGGCCTCTTGTTGTAGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: AWQCHASRLESARKD*LFGLVCPWPLVVGL Trigger: CAGGCCTACAACAAGAGGCCAGGGACAGACCAGACCAAAGAGGCAGTCCTTACGAGCAGATTCCAACCTGCTGGCATGGCACTGCCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS CCA 90 bp | TCTTGTGCAGGAAAGAGACCTGGGGCTTTGCAGGAAGGCGGGGACTaGTGGCCTTGTCAGGGAGCATGCTGGGAAATTCTGTGGCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: SCAGKRPGALQEGGD*WPCQGACWEILWLE Trigger: TTCCAGCCACAGAATTTCCCAGCATGCTCCCTGACAAGGCCACCAGTCCCCGCCTTCCTGCAAAGCCCCAGGTCTCTTTCCTGCACAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS-3UTR CAA 90 bp | ACTACCCCACCCCACCTCCCTGATGACATGGTATCACTTATGTGTGCTGACCTCAAGAGACCTGGGGCTTaGCAGGAAGGCGGGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: TTPPHLPDDMVSLMCADLKRPGA*QEGGDW Trigger: CCAGTCCCCGCCTTCCTGCAAAGCCCCAGGTCTCTT...GAGGTCAGCACACATAAGTGATACCATGTCATCAGGGAGGTGGGGTGGGGTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS GCA 90 bp | ACTTCATCCGAGACAGACCGGGAACTCATGTCTAGGGCTTTCTTGTaGAGGAAAGAGACCTGGGGCTTTGCAGGAAGGCGGGGACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: TSSETDRELMSRAFL*RKETWGFAGRRGLV Trigger: CACCAGTCCCCGCCTTCCTGCAAAGCCCCAGGTCTCTTTCCTGCACAAGAAAGCCCTAGACATGAGTTCCCGGTCTGTCTCGGATGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS CCA 90 bp | CTTGTCAGGCTTGTGCACTCGTCCAGTGTCCTTGTTCTTGGCGGCTaGGATCTGCTCATAGGTGTTTCCTGGCTCTGGGAGCTTCGAGGT | + |
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Preference number: 5 (lower is better) Translates to: LVRLVHSSSVLVLGG*DLLIGVSWLWELRG Trigger: ACCTCGAAGCTCCCAGAGCCAGGAAACACCTATGAGCAGATCCCAGCCGCCAAGAACAAGGACACTGGACGAGTGCACAAGCCTGACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS-3UTR CAA 90 bp | CATGGTGGGTTGCATGGGAGGAATCTGAGCTGCTCCAAAGGTCAGGACTGGCTGAAGGAACCGAGGGCTTaGTCCCTGAGTAGCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: HGGLHGRNLSCSKGQDWLKEPRA*SLSSCS Trigger: AGAGCAGCTACTCAGGGACAAAGCCCTCGGTTCCTT...CAGCCAGTCCTGACCTTTGGAGCAGCTCAGATTCCTCCCATGCAACCCACCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS-3UTR CAA 90 bp | CATGGTGGGTTGCATGGGAGGAATCTGAGCTGCTCCAAAGGTCAGGACTGGCTGTGCTGGAGGCCCGTGTaGATGGCATCATACAGATCA | + |
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Preference number: 5 (lower is better) Translates to: HGGLHGRNLSCSKGQDWLCWRPV*MASYRS Trigger: TGATCTGTATGATGCCATCAACACGGGCCTCCAGCA...CAGCCAGTCCTGACCTTTGGAGCAGCTCAGATTCCTCCCATGCAACCCACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS-3UTR CAA 90 bp | AGTCTTAAACTTTCCACCACCCCAAGTAGATGGGGACTTGTAGAGTTCAGAGGGAAGAGACCTGGGGCTTaGCAGGAAGGCGGGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: SLKLSTTPSRWGLVEFRGKRPGA*QEGGDW Trigger: CCAGTCCCCGCCTTCCTGCAAAGCCCCAGGTCTCTT...CCCTCTGAACTCTACAAGTCCCCATCTACTTGGGGTGGTGGAAAGTTTAAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS-3UTR CAA 90 bp | CATCCTGGGGTTGCAGGCTGCTACAAAGTCTCTCCTGTGCCTTCCCAGATAGGTCGATTTCGCAGCTGGTaGATGACAAAATGGCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: HPGVAGCYKVSPVPSQIGRFRSW*MTKWRQ Trigger: CTGCCGCCATTTTGTCATCAACCAGCTGCGAAATCG...ACCTATCTGGGAAGGCACAGGAGAGACTTTGTAGCAGCCTGCAACCCCAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS-3UTR CAA 90 bp | GCTGCTGTATCCCAAGCTCCTGGGTTTAATCCTTCTGAGGCAGGTGTGGAGGATATGTCTAGGGCTTTCTaGTGCAGGAAAGAGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: AAVSQAPGFNPSEAGVEDMSRAF*CRKETW Trigger: CCAGGTCTCTTTCCTGCACAAGAAAGCCCTAGACAT...ATCCTCCACACCTGCCTCAGAAGGATTAAACCCAGGAGCTTGGGATACAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS-3UTR CAA 90 bp | TTAGGAGCCCAGCCTGCTGCTGAGTTAGGACCATGGCTTCTGAAGTTGGACCTTATGTCTAGGGCTTTCTaGTGCAGGAAAGAGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: LGAQPAAELGPWLLKLDLMSRAF*CRKETW Trigger: CCAGGTCTCTTTCCTGCACAAGAAAGCCCTAGACAT...AAGGTCCAACTTCAGAAGCCATGGTCCTAACTCAGCAGCAGGCTGGGCTCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS-3UTR CAA 90 bp | AGTTGGAGAGGGGACTGTGGTCTTGGTTCCTGCCTCCTGCTTGTAGAGACAGGGCAGAATTTGTGCTTCTaGTCTGTGAAGAAGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SWRGDCGLGSCLLLVETGQNLCF*SVKKSL Trigger: GAGGCTCTTCTTCACAGACAAGAAGCACAAATTCTG...CCCTGTCTCTACAAGCAGGAGGCAGGAACCAAGACCACAGTCCCCTCTCCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS-3UTR CAA 90 bp | GTGAGGATTGTTTCCATTTCCCTAAAAATAGATTTGTCTACCTACAGAGAGCTCCGGGGACTGGTGGCCTaGTCAGGGAGCATGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VRIVSISLKIDLSTYRELRGLVA*SGSMLG Trigger: TCCCAGCATGCTCCCTGACAAGGCCACCAGTCCCCG...GAGCTCTCTGTAGGTAGACAAATCTATTTTTAGGGAAATGGAAACAATCCTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS CCA 90 bp | CTGGGAAATTCTGTGGCTGGAATTTTCAGGCTTAGATTAGTGTGCTaGAGGCCCGTGTTGATGGCATCATACAGATCATTTTCCTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: LGNSVAGIFRLRLVC*RPVLMASYRSFSSS Trigger: GCTAGAGGAAAATGATCTGTATGATGCCATCAACACGGGCCTCCAGCACACTAATCTAAGCCTGAAAATTCCAGCCACAGAATTTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS-3UTR CAA 90 bp | GTTCTCAGAAGTAATAGCATGATGTCATTTAGACAATCTGGAAAATGTCTGTCTGCCTCCTCCAGTGCCTaGCCCAGATGGAGCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: VLRSNSMMSFRQSGKCLSASSSA*PRWSCS Trigger: AGAGCAGCTCCATCTGGGCAAGGCACTGGAGGAGGC...AGACAGACATTTTCCAGATTGTCTAAATGACATCATGCTATTACTTCTGAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS GCA 90 bp | ATGCTGGGAAATTCTGTGGCTGGAATTTTCAGGCTTAGATTAGTGTaGTGGAGGCCCGTGTTGATGGCATCATACAGATCATTTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: MLGNSVAGIFRLRLV*WRPVLMASYRSFSS Trigger: AGAGGAAAATGATCTGTATGATGCCATCAACACGGGCCTCCAGCACACTAATCTAAGCCTGAAAATTCCAGCCACAGAATTTCCCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS CCA 72 bp | CCTGCCTGGGGAACAAGCCAAGCTGCCAGCAGAAGCTaGCCTGAGCGTGCCCCACACCTCTGTGCCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: PAWGTSQAASRS*PERAPHLCAQA Trigger: GGCCTGGGCACAGAGGTGTGGGGCACGCTCAGGCCAGCTTCTGCTGGCAGCTTGGCTTGTTCCCCAGGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS CAA 90 bp | CCGACAGCCCGGTCACTGAGGCGGATGAGGAAGGAACCGAGGGCTTaGTCCCTGAGTAGCTGCTCTGTTTGCTTGCGAGTGATGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: PTARSLRRMRKEPRA*SLSSCSVCLRVMNP Trigger: TGGATTCATCACTCGCAAGCAAACAGAGCAGCTACTCAGGGACAAAGCCCTCGGTTCCTTCCTCATCCGCCTCAGTGACCGGGCTGTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS CAA 72 bp | CGGTCACTGAGGCGGATGAGGAAGGAACCGAGGGCTTaGTCCCTGAGTAGCTGCTCTGTTTGCTTGCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: RSLRRMRKEPRA*SLSSCSVCLRV Trigger: CACTCGCAAGCAAACAGAGCAGCTACTCAGGGACAAAGCCCTCGGTTCCTTCCTCATCCGCCTCAGTGACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS CAA 90 bp | CTCACTTCATCCGAGACAGACCGGGAACTCATGTCTAGGGCTTTCTaGTGCAGGAAAGAGACCTGGGGCTTTGCAGGAAGGCGGGGACTG | + |
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Preference number: 6 (lower is better) Translates to: LTSSETDRELMSRAF*CRKETWGFAGRRGL Trigger: CAGTCCCCGCCTTCCTGCAAAGCCCCAGGTCTCTTTCCTGCACAAGAAAGCCCTAGACATGAGTTCCCGGTCTGTCTCGGATGAAGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS GCA 72 bp | TCTGTGAAGAAGAGCCTCCGGAACTTGTCAGGCTTGTaGACTCGTCCAGTGTCCTTGTTCTTGGCGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SVKKSLRNLSGL*TRPVSLFLAAG Trigger: CCCAGCCGCCAAGAACAAGGACACTGGACGAGTGCACAAGCCTGACAAGTTCCGGAGGCTCTTCTTCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS CCA 72 bp | CTTGTGCACTCGTCCAGTGTCCTTGTTCTTGGCGGCTaGGATCTGCTCATAGGTGTTTCCTGGCTCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LVHSSSVLVLGG*DLLIGVSWLWE Trigger: CTCCCAGAGCCAGGAAACACCTATGAGCAGATCCCAGCCGCCAAGAACAAGGACACTGGACGAGTGCACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS TCA 72 bp | GGTAATGGCGTAGGAGCTCATCCAGGGTGCTGTGGCTaGGGGTGTCTCCTGAGACAAGGTAACGTCGATTTC | + |
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Preference number: 6 (lower is better) Translates to: GNGVGAHPGCCG*GCLLRQGNVDF Trigger: GAAATCGACGTTACCTTGTCTCAGGAGACACCCTCAGCCACAGCACCCTGGATGAGCTCCTACGCCATTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS GCA 72 bp | TTTGATCTTCATCTGAGAGTTTCCCTGAGGGCTCCCTaGCTGGGGAACAAGCCAAGCTGCCAGCAGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FDLHLRVSLRAP*LGNKPSCQQKL Trigger: CAGCTTCTGCTGGCAGCTTGGCTTGTTCCCCAGGCAGGGAGCCCTCAGGGAAACTCTCAGATGAAGATCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS GCA 72 bp | CAGGAAGGCGGGGACTGGTGGCCTTGTCAGGGAGCATaGTGGGAAATTCTGTGGCTGGAATTTTCAGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: QEGGDWWPCQGA*WEILWLEFSGL Trigger: TAAGCCTGAAAATTCCAGCCACAGAATTTCCCAGCATGCTCCCTGACAAGGCCACCAGTCCCCGCCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS CCA 72 bp | GCTCGTAAGGACTGCCTCTTTGGTCTGGTCTGTCCCTaGCCTCTTGTTGTAGGCCTGGTGTCTCAACAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ARKDCLFGLVCP*PLVVGLVSQQG Trigger: ACCTTGTTGAGACACCAGGCCTACAACAAGAGGCCAGGGACAGACCAGACCAAAGAGGCAGTCCTTACGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS CAA 72 bp | TCCGAGACAGACCGGGAACTCATGTCTAGGGCTTTCTaGTGCAGGAAAGAGACCTGGGGCTTTGCAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SETDRELMSRAF*CRKETWGFAGR Trigger: CCTTCCTGCAAAGCCCCAGGTCTCTTTCCTGCACAAGAAAGCCCTAGACATGAGTTCCCGGTCTGTCTCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS CCA 72 bp | GAAGGCGGGGACTGGTGGCCTTGTCAGGGAGCATGCTaGGAAATTCTGTGGCTGGAATTTTCAGGCTTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: EGGDWWPCQGAC*EILWLEFSGLD Trigger: ATCTAAGCCTGAAAATTCCAGCCACAGAATTTCCCAGCATGCTCCCTGACAAGGCCACCAGTCCCCGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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| CDS CAA 72 bp | TTGTCTGTGAAGAAGAGCCTCCGGAACTTGTCAGGCTaGTGCACTCGTCCAGTGTCCTTGTTCTTGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSVKKSLRNLSG*CTRPVSLFLAA Trigger: AGCCGCCAAGAACAAGGACACTGGACGAGTGCACAAGCCTGACAAGTTCCGGAGGCTCTTCTTCACAGACAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS GCA 72 bp | TGGTGTCTCAACAAGGTGGTAGGTATCTGTAGAGCTTaGTTCAGAGGAGGACTGAGCCTCGTGGCTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: WCLNKVVGICRA*FRGGLSLVAQL Trigger: AAGCTGAGCCACGAGGCTCAGTCCTCCTCTGAAGCAAGCTCTACAGATACCTACCACCTTGTTGAGACACCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS CAA 72 bp | TTGTGCTTCTTGTCTGTGAAGAAGAGCCTCCGGAACTaGTCAGGCTTGTGCACTCGTCCAGTGTCCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LCFLSVKKSLRN*SGLCTRPVSLF Trigger: GAACAAGGACACTGGACGAGTGCACAAGCCTGACAAGTTCCGGAGGCTCTTCTTCACAGACAAGAAGCACAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060242.12 ENSMUST00000118413.3 |
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| CDS CCA 72 bp | TCTGTGGCTGGAATTTTCAGGCTTAGATTAGTGTGCTaGAGGCCCGTGTTGATGGCATCATACAGATCATTT | + |
|
Preference number: 6 (lower is better) Translates to: SVAGIFRLRLVC*RPVLMASYRSF Trigger: AAATGATCTGTATGATGCCATCAACACGGGCCTCCAGCACACTAATCTAAGCCTGAAAATTCCAGCCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118413.3 |
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