Pregenerated sensors for SH2D6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052631Ensembl transcript IDs: ENSMUST00000089687.11, ENSMUST00000159577.3, ENSMUST00000159877.3, ENSMUST00000160123.9, ENSMUST00000160761.3, ENSMUST00000162561.9, ENSMUST00000234038.2, ENSMUST00000234220.2, ENSMUST00000234615.2, ENSMUST00000235004.2
Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGTTGCCGGATGGGAATGTTGAAGACACGGCCTCTGAGGAGTACTaGCAAAGTGAAGGGCTGGGAACTGTGAGGCCCAGAGCTGAGGCG | + |
|
Preference number: 1 (lower is better) Translates to: QLPDGNVEDTASEEY*QSEGLGTVRPRAEA Trigger: CGCCTCAGCTCTGGGCCTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCAACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR TCA 90 bp | TGCAAACCACACACAAGAAGTCAGTCTAAGGAGAGGCAGTGTCTCTaGGGAAGCCAGCCTCCCAGGTGGCCATCTTCATGCCTCTCAGTT | + |
|
Preference number: 1 (lower is better) Translates to: CKPHTRSQSKERQCL*GSQPPRWPSSCLSV Trigger: AACTGAGAGGCATGAAGATGGCCACCTGGGAGGCTGGCTTCCTCAGAGACACTGCCTCTCCTTAGACTGACTTCTTGTGTGTGGTTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR GCA 90 bp | AAACAGCCTAAAGTGGGAGAGAAAGTGAATGGGGCACACATCACGTaGCTGAGGGGGATCTGTGTGCTGCTGTTTCTTCAGGGCTTGGTG | + |
|
Preference number: 1 (lower is better) Translates to: KQPKVGEKVNGAHIT*LRGICVLLFLQGLV Trigger: CACCAAGCCCTGAAGAAACAGCAGCACACAGATCCCCCTCAGGCACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTTTAGGCTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR CAA 90 bp | ATTCCTGCCCTCCCGACCCAGGGCATAGTGGTGCCCACCGTCCAGTaGCCGGATGGGAATGTTGAAGACACGGCCTCTGAGGAGTACTGC | + |
|
Preference number: 2 (lower is better) Translates to: IPALPTQGIVVPTVQ*PDGNVEDTASEEYC Trigger: GCAGTACTCCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCAACTGGACGGTGGGCACCACTATGCCCTGGGTCGGGAGGGCAGGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR TCA 90 bp | CGTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGCCACAGGGAGTACTGCCAAAGTaGAGGGCTGGGAACTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RPQGAGGASCNAEPWRPQGVLPK*RAGNCE Trigger: CTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCC...CTGTGGCCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCGGTTGCCACTGTGTCCGTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTAACCTGCAGAGCTTTTaGGGTGGAGGAAGGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PGCHCVRPQGAGGASCNANLQSF*GGGRQG Trigger: TCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTT...AGCATTACACGAAGCACCCCCTGCCCCTTGTGGACGGACACAGTGGCAACCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR CCA 90 bp | GTCCGTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGCCAAACCTGCAGAGCTTTTaGGGTGGAGGAAGGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: VRPQGAGGASCNAEPWRPNLQSF*GGGRQG Trigger: TCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTT...TGGCCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGACGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGGGAAGCGCAGGTAGGTaGGTCCCCGGTTGCCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: PGGHLHASQFEPAELLGWGSAGR*VPGCHC Trigger: ACAGTGGCAACCGGGGACTCACCTACCTGCGCTTCC...CCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR TCA 90 bp | GGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGAGAGGCAGTGTCTCTaGGGAAGCCAGCCTCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GHLHASQFEPAELLGWRKERQCL*GSQPPR Trigger: CCTGGGAGGCTGGCTTCCTCAGAGACACTGCCTCTC...CTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTCCGTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGGCTCTCTCAACAGACTaGCGGTCACAGTTTCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: CVRPQGAGGASCNAEPWRALSTD*RSQFPE Trigger: CTCTGGAAACTGTGACCGTCAGTCTGTTGAGAGAGC...CCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGACGGACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTCCGTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGAAGTGGGAGAGAAAGTaGATGGGGCACACATCACGT | + |
|
Preference number: 2 (lower is better) Translates to: CVRPQGAGGASCNAEPWRKWERK*MGHTSR Trigger: ACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTT...CCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGACGGACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR TCA 90 bp | CATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGAGAGGCAGTGTCTCTaGGGAAGCCAGCCTCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: HLHASQFEPAELLGWRKAERQCL*GSQPPR Trigger: CCTGGGAGGCTGGCTTCCTCAGAGACACTGCCTCTC...TGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGAAGCGCAGGTAGGTaGGTCCCCGGTTGCCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: HLHASQFEPAELLGWRKAGSAGR*VPGCHC Trigger: ACAGTGGCAACCGGGGACTCACCTACCTGCGCTTCC...TGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCGAGAGGCAGTGTCTCTaGGGAAGCCAGCCTCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: CWEPSSSQKMQTTHKKSVERQCL*GSQPPR Trigger: CCTGGGAGGCTGGCTTCCTCAGAGACACTGCCTCTC...GACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR GCA 90 bp | CATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGCTCCTCATGATTCCTaGCCTCCCGACCCAGGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: HLHASQFEPAELLGWRKAAPHDS*PPDPGH Trigger: ATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGC...TGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAACCTGCAGAGCTTTTaGGGTGGAGGAAGGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PGGHLHASQFEPAELLGWNLQSF*GGGRQG Trigger: TCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTT...CCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCGTCCAGTTGCCGGATGGGAATGTTGAAGACACGGCCTCTGAGGAGTACTGCAAGTGGGAGAGAAAGTaGATGGGGCACACATCACGT | + |
|
Preference number: 2 (lower is better) Translates to: TVQLPDGNVEDTASEEYCKWERK*MGHTSR Trigger: ACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTT...GCAGTACTCCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCAACTGGACGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAAGTGGGAGAGAAAGTaGATGGGGCACACATCACGT | + |
|
Preference number: 2 (lower is better) Translates to: PGGHLHASQFEPAELLGWKWERK*MGHTSR Trigger: ACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTT...CCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGAGTACTGCCAAAGTaGAGGGCTGGGAACTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: HLHASQFEPAELLGWRKAGVLPK*RAGNCE Trigger: CTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCC...TGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR GCA 90 bp | CATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCATGCCCACCGTCCAGTTaGCGGATGGGAATGTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: HLHASQFEPAELLGWRKACPPSS*RMGMLK Trigger: CTTCAACATTCCCATCCGGCAACTGGACGGTGGGCA...TGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAGCCAGCCTCCCAGGTaGCCATCTTCATGCCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: AGNLVPPRRCKPHTRSQSSQPPR*PSSCLS Trigger: TGAGAGGCATGAAGATGGCCACCTGGGAGGCTGGCT...AGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCAGAGAGGCAGTGTCTCTaGGGAAGCCAGCCTCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: IESILCAGNLVPPRRCKPERQCL*GSQPPR Trigger: CCTGGGAGGCTGGCTTCCTCAGAGACACTGCCTCTC...TGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGAAGTGGGAGAGAAAGTaGATGGGGCACACATCACGT | + |
|
Preference number: 2 (lower is better) Translates to: IFMPLSLNLQSFWGGGRQKWERK*MGHTSR Trigger: ACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTT...CTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTGCTTCGTGTAATGCTGAACCATGGCGGCCACAGAGGAGAAGAGCTCCTCATGTTCCTCCCAGAAGATaGAAACCACACACAAGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: GASCNAEPWRPQRRRAPHVPPRR*KPHTRS Trigger: ACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAAC...ATGAGGAGCTCTTCTCCTCTGTGGCCGCCATGGTTCAGCATTACACGAAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCAAGTGGGAGAGAAAGTaGATGGGGCACACATCACGT | + |
|
Preference number: 2 (lower is better) Translates to: CWEPSSSQKMQTTHKKSVKWERK*MGHTSR Trigger: ACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTT...GACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGCCATCCTTTTGGAAGTaGAGCAGGGCTCTCTCAACA | + |
|
Preference number: 2 (lower is better) Translates to: TVCWEPSSSQKMQTTHKKPSFWK*SRALST Trigger: TGTTGAGAGAGCCCTGCTTCACTTCCAAAAGGATGG...CTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGTTCCTCCCAGAAGATaGAAACCACACACAAGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SQVAIFMPLSLNLQSFWGVPPRR*KPHTRS Trigger: ACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAAC...ACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGTTCCTCCCAGAAGATaGAAACCACACACAAGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: QVAIFMPLSLNLQSFWGGVPPRR*KPHTRS Trigger: ACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAAC...TCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR CCA 90 bp | AACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGAACCTGCAGAGCTTTTaGGGTGGAGGAAGGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: NLVPPRRCKPHTRSQSKENLQSF*GGGRQG Trigger: TCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTT...CTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR CCA 90 bp | AACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGTGTTTCTTCAGGGCTTaGTGGGGAAGCGCAGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: NLVPPRRCKPHTRSQSKECFFRA*WGSAGR Trigger: CCTACCTGCGCTTCCCCACCAAGCCCTGAAGAAACA...CTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCACCGTCCAGTTGCCGGATGGGAATGTTGAAGACACGGCCTCTGAGGAGTGAACCTGCAGAGCTTTaGGGGTGGAGGAAGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CPPSSCRMGMLKTRPLRSEPAEL*GWRKAG Trigger: CCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTC...ACTCCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCAACTGGACGGTGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR TCA 72 bp | CACACAAGAAGTCAGTCTAAGGAGAGGCAGTGTCTCTaGGGAAGCCAGCCTCCCAGGTGGCCATCTTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: HTRSQSKERQCL*GSQPPRWPSSC Trigger: GCATGAAGATGGCCACCTGGGAGGCTGGCTTCCTCAGAGACACTGCCTCTCCTTAGACTGACTTCTTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR GCA 72 bp | GATGGGAATGTTGAAGACACGGCCTCTGAGGAGTACTaGCAAAGTGAAGGGCTGGGAACTGTGAGGCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DGNVEDTASEEY*QSEGLGTVRPR Trigger: TCTGGGCCTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCCTCAGAGGCCGTGTCTTCAACATTCCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGGAACCTGCAGAGCTTTaGGGGTGGAGGAAGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TVCWEPSSSQKMQTTHKKEPAEL*GWRKAG Trigger: CCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTC...CTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGAACCTGCAGAGCTTTaGGGGTGGAGGAAGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VCWEPSSSQKMQTTHKKSEPAEL*GWRKAG Trigger: CCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTC...TGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGAGGGAACCTGCAGAGCTTTaGGGGTGGAGGAAGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LVPPRRCKPHTRSQSKEREPAEL*GWRKAG Trigger: CCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTC...CCTCTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR GCA 72 bp | AAAGTGGGAGAGAAAGTGAATGGGGCACACATCACGTaGCTGAGGGGGATCTGTGTGCTGCTGTTTCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KVGEKVNGAHIT*LRGICVLLFLQ Trigger: CTGAAGAAACAGCAGCACACAGATCCCCCTCAGGCACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTTCATGCCTCTCAGTTaGAACCTGCAGAGCTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TVCWEPSSSQKMQTTHKKFMPLS*NLQSFW Trigger: CCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAA...CTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR GCA 72 bp | ATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATaGAAACCACACACAAGAAGTCAGTCTAAGGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ILCAGNLVPPRR*KPHTRSQSKER Trigger: CCTCTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCGCAGGTAGGTGAGTCCCCGGTTGCCACTGTGTCCGTCCACAAGGGGCAGGGGTATCTGCACCTCTaGCAGGAAGGAGTGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EAQVGESPVATVSVHKGQGYLHL*QEGVVA Trigger: GGCCACCACTCCTTCCTGCCAGAGGTGCAGATACCC...CTGCCCCTTGTGGACGGACACAGTGGCAACCGGGGACTCACCTACCTGCGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | GCCCTCCCGACCCAGGGCATAGTGGTGCCCACCGTCCAGTTGCCGGATGGGAATGGAAGGAAGGGTTTATaGGGAGTCCTCTGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPTQGIVVPTVQLPDGNGRKGL*GVLWPW Trigger: CCATGGCCAGAGGACTCCCCATAAACCCTTCCTTCC...ATTCCCATCCGGCAACTGGACGGTGGGCACCACTATGCCCTGGGTCGGGAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| 3UTR CAA 72 bp | CTCCCGACCCAGGGCATAGTGGTGCCCACCGTCCAGTaGCCGGATGGGAATGTTGAAGACACGGCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPTQGIVVPTVQ*PDGNVEDTASE Trigger: CTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCAACTGGACGGTGGGCACCACTATGCCCTGGGTCGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR TCA 90 bp | CCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGTGTGAGGCCCAGAGCTaGGGCGCACCGTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGGHLHASQFEPAELLGWCEAQS*GAPCRP Trigger: GGGCCTACACGGTGCGCCTCAGCTCTGGGCCTCACA...CCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | GTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGCCACAGAAGAGCCAAGAGACTGTaGAGGGGCCAGACTGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHKGQGVLRVMLNHGGHRRAKRL*RGQTDG Trigger: CCCGTCAGTCTGGCCCCTGCACAGTCTCTTGGCTCT...TCTGTGGCCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS-3UTR TCA 90 bp | TCCCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTTGTGAGGCCCAGAGCTaGGGCGCACCGTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQVAIFMPLSLNLQSFWGCEAQS*GAPCRP Trigger: GGGCCTACACGGTGCGCCTCAGCTCTGGGCCTCACA...ACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | GGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGTGTGAGGCCCAGAGCTaGGGCGCACCGTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHLHASQFEPAELLGWRKCEAQS*GAPCRP Trigger: GGGCCTACACGGTGCGCCTCAGCTCTGGGCCTCACA...CTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| 3UTR CAA 72 bp | CCCAGAGCTGAGGCGCACCGTGTAGGCCCCATCCTTTaGGAAGTGAAGCAGGGCTCTCTCAACAGACTGACG | + |
|
Preference number: 4 (lower is better) Translates to: PRAEAHRVGPIL*EVKQGSLNRLT Trigger: CGTCAGTCTGTTGAGAGAGCCCTGCTTCACTTCCAAAAGGATGGGGCCTACACGGTGCGCCTCAGCTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR TCA 90 bp | ATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGTGTGAGGCCCAGAGCTaGGGCGCACCGTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IFMPLSLNLQSFWGGGRQCEAQS*GAPCRP Trigger: GGGCCTACACGGTGCGCCTCAGCTCTGGGCCTCACA...CTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | CATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCATGTGAGGCCCAGAGCTaGGGCGCACCGTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HLHASQFEPAELLGWRKACEAQS*GAPCRP Trigger: GGGCCTACACGGTGCGCCTCAGCTCTGGGCCTCACA...TGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCTAAAGTGGGAGAGAAAGTGAATGGGGCACACATCACGTGCCTGAGGGGGAGAGCCAAGAGACTGTaGAGGGGCCAGACTGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPKVGEKVNGAHITCLRGRAKRL*RGQTDG Trigger: CCCGTCAGTCTGGCCCCTGCACAGTCTCTTGGCTCT...CCCCCTCAGGCACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTTTAGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089687.11 ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR GCA 90 bp | GTCCGTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGCCACCAAACTTGGGTATCTaGACCTCTGGCAGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRPQGAGGASCNAEPWRPPNLGI*TSGRKE Trigger: CTCCTTCCTGCCAGAGGTGCAGATACCCAAGTTTGG...TGGCCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGACGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | TTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGGAGGGGCAGTGGTGGCTTaGATGGATCCAGGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FMPLSLNLQSFWGGGRQGGAVVA*MDPGAQ Trigger: CTGGGCCCCTGGATCCATCCAAGCCACCACTGCCCC...TCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000089687.11 ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CCA 90 bp | GCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGGGGGCAGTGGTGGCTTaGATGGATCCAGGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AIFMPLSLNLQSFWGGGRGAVVA*MDPGAQ Trigger: CTGGGCCCCTGGATCCATCCAAGCCACCACTGCCCC...CCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000089687.11 ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CCA 90 bp | CATGATTCCTGCCCTCCCGACCCAGGGCATAGTGGTGCCCACCGTCCAGTTGCCCTGCTTTGCAGGCTGTaGGTTCATTGCTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HDSCPPDPGHSGAHRPVALLCRL*VHCCLQ Trigger: CTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAG...GGCAACTGGACGGTGGGCACCACTATGCCCTGGGTCGGGAGGGCAGGAATCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | CCTCATGATTCCTGCCCTCCCGACCCAGGGCATAGTGGTGCCCACCGTCCAGTTAGTCAAGACTGGAACTaGATCCGGCTCACACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHDSCPPDPGHSGAHRPVSQDWN*IRLTLQ Trigger: CTGGAGTGTGAGCCGGATCCAGTTCCAGTCTTGACT...AACTGGACGGTGGGCACCACTATGCCCTGGGTCGGGAGGGCAGGAATCATGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR TCA 90 bp | GGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGGAAGCGCAGGTAGGTaGGTCCCCGGTTGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GHLHASQFEPAELLGWRKGSAGR*VPGCHC Trigger: ACAGTGGCAACCGGGGACTCACCTACCTGCGCTTCC...CTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGGCTCCTCATGATTCCTaGCCTCCCGACCCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPGGHLHASQFEPAELLGAPHDS*PPDPGH Trigger: ATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGC...CCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGATGTGAGGCCCAGAGCTaGGGCGCACCGTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILCAGNLVPPRRCKPHTRCEAQS*GAPCRP Trigger: GGGCCTACACGGTGCGCCTCAGCTCTGGGCCTCACA...TCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | GGGTGGAGGAAGGCAGGGAAAAGAAAACAGCCTAAAGTGGGAGAGAAAGTGAATTGTGAGGCCCAGAGCTaGGGCGCACCGTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GWRKAGKRKQPKVGEKVNCEAQS*GAPCRP Trigger: GGGCCTACACGGTGCGCCTCAGCTCTGGGCCTCACA...ATTCACTTTCTCTCCCACTTTAGGCTGTTTTCTTTTCCCTGCCTTCCTCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGGAAGCGCAGGTAGGTaGGTCCCCGGTTGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFMPLSLNLQSFWGGGRQGSAGR*VPGCHC Trigger: ACAGTGGCAACCGGGGACTCACCTACCTGCGCTTCC...CTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | GCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGGCTCCTCATGATTCCTaGCCTCCCGACCCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AIFMPLSLNLQSFWGGGRAPHDS*PPDPGH Trigger: ATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGC...CCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | GTCCGTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGCCAGCCTTCAAAAAGGGATaGCTGTTTCTCCAGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRPQGAGGASCNAEPWRPAFKKG*LFLQVS Trigger: AGAGACCTGGAGAAACAGGCATCCCTTTTTGAAGGC...TGGCCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGACGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | GTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGCCACAGATCTTGGCAGAGGAACTaGAGGTATCAGGGCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHKGQGVLRVMLNHGGHRSWQRN*RYQGFG Trigger: TCCAAAGCCCTGATACCTCCAGTTCCTCTGCCAAGA...TCTGTGGCCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | CGTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGCCACAGAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPQGAGGASCNAEPWRPQNQPLT*AIQMFL Trigger: CAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTT...CTGTGGCCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | CCTCATGATTCCTGCCCTCCCGACCCAGGGCATAGTGGTGCCCACCGTCCAGTTAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PHDSCPPDPGHSGAHRPVNQPLT*AIQMFL Trigger: CAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTT...AACTGGACGGTGGGCACCACTATGCCCTGGGTCGGGAGGGCAGGAATCATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | GGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGGGTATCTGCACCTCTaGCAGGAAGGAGTGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GHLHASQFEPAELLGWRKGYLHL*QEGVVA Trigger: GGCCACCACTCCTTCCTGCCAGAGGTGCAGATACCC...CTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR TCA 90 bp | AACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGTGTGAGGCCCAGAGCTaGGGCGCACCGTGTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NLVPPRRCKPHTRSQSKECEAQS*GAPCRP Trigger: GGGCCTACACGGTGCGCCTCAGCTCTGGGCCTCACA...CTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGGAAGCGCAGGTAGGTaGGTCCCCGGTTGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCWEPSSSQKMQTTHKKSGSAGR*VPGCHC Trigger: ACAGTGGCAACCGGGGACTCACCTACCTGCGCTTCC...TGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | AAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACGGGGCAGTGGTGGCTTaGATGGATCCAGGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCWEPSSSQKMQTTHGAVVA*MDPGAQ Trigger: CTGGGCCCCTGGATCCATCCAAGCCACCACTGCCCC...GTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089687.11 ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTGGGAGAGAAAGTGAATGGGGCACACATCACGTGCCTGAGGGGGATCTGTTCAGAGCAGGGGCTATaGAGGAAGCAGACAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVGEKVNGAHITCLRGICSEQGL*RKQTAS Trigger: GGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGA...ACAGATCCCCCTCAGGCACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGGATCAGAGCAGGGGCTATaGAGGAAGCAGACAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FMPLSLNLQSFWGGGRQGSEQGL*RKQTAS Trigger: GGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGA...TCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTTCTGGCAGGAAGGAGTaGTGGCCCCAACCGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGNLVPPRRCKPHTRSQSSGRKE*WPQPGL Trigger: AAGGCCCGGTTGGGGCCACCACTCCTTCCTGCCAGA...AGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CCA 90 bp | ACCGTCCAGTTGCCGGATGGGAATGTTGAAGACACGGCCTCTGAGGAGTACTGCGTTTCTCCAGGTCTCTaGGCCAGACAGGAAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TVQLPDGNVEDTASEEYCVSPGL*ARQERW Trigger: CCATCTTTCCTGTCTGGCCCAGAGACCTGGAGAAAC...GCAGTACTCCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCAACTGGACGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS-3UTR TCA 90 bp | CCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGGCTCTCTCAACAGACTaGCGGTCACAGTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGGHLHASQFEPAELLGWALSTD*RSQFPE Trigger: CTCTGGAAACTGTGACCGTCAGTCTGTTGAGAGAGC...CCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | AAAGTGGGAGAGAAAGTGAATGGGGCACACATCACGTGCCTGAGGGGGATCTGTGGAGTACTGCCAAAGTaGAGGGCTGGGAACTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVGEKVNGAHITCLRGICGVLPK*RAGNCE Trigger: CTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCC...ACAGATCCCCCTCAGGCACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAGGAGTACTGCCAAAGTaGAGGGCTGGGAACTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAIFMPLSLNLQSFWGGGGVLPK*RAGNCE Trigger: CTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCC...TCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | GGGTGGAGGAAGGCAGGGAAAAGAAAACAGCCTAAAGTGGGAGAGAAAGTGAATGGAAGCGCAGGTAGGTaGGTCCCCGGTTGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWRKAGKRKQPKVGEKVNGSAGR*VPGCHC Trigger: ACAGTGGCAACCGGGGACTCACCTACCTGCGCTTCC...ATTCACTTTCTCTCCCACTTTAGGCTGTTTTCTTTTCCCTGCCTTCCTCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGAGGGGAAGCGCAGGTAGGTaGGTCCCCGGTTGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVPPRRCKPHTRSQSKERGSAGR*VPGCHC Trigger: ACAGTGGCAACCGGGGACTCACCTACCTGCGCTTCC...CCTCTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | GGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGTGCCCACCGTCCAGTTaGCGGATGGGAATGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHLHASQFEPAELLGWRKCPPSS*RMGMLK Trigger: CTTCAACATTCCCATCCGGCAACTGGACGGTGGGCA...CTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | CATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGGAAATGCCCACCGTCCAGTTaGCGGATGGGAATGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HASQFEPAELLGWRKAGKCPPSS*RMGMLK Trigger: CTTCAACATTCCCATCCGGCAACTGGACGGTGGGCA...TTTCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | TTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGGATGCCCACCGTCCAGTTaGCGGATGGGAATGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FMPLSLNLQSFWGGGRQGCPPSS*RMGMLK Trigger: CTTCAACATTCCCATCCGGCAACTGGACGGTGGGCA...TCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTGCTCCTCATGATTCCTaGCCTCCCGACCCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCAGNLVPPRRCKPHTRSAPHDS*PPDPGH Trigger: ATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGC...ACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGCTCTCTCAACAGACTaGCGGTCACAGTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVAIFMPLSLNLQSFWGGALSTD*RSQFPE Trigger: CTCTGGAAACTGTGACCGTCAGTCTGTTGAGAGAGC...TCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | GGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCTCTCTCAACAGACTaGCGGTCACAGTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GHLHASQFEPAELLGWRKALSTD*RSQFPE Trigger: CTCTGGAAACTGTGACCGTCAGTCTGTTGAGAGAGC...CTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGAGCCAAGAGACTGTaGAGGGGCCAGACTGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILCAGNLVPPRRCKPHTRRAKRL*RGQTDG Trigger: CCCGTCAGTCTGGCCCCTGCACAGTCTCTTGGCTCT...TCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089687.11 ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR GCA 90 bp | TTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGGAAACAGGTCCCTGCTTTaGAGGCTGTGGGTTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: FMPLSLNLQSFWGGGRQGNRSLL*RLWVHC Trigger: GCAATGAACCCACAGCCTGCAAAGCAGGGACCTGTT...TCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | AAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACGCTCCTCATGATTCCTaGCCTCCCGACCCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCWEPSSSQKMQTTHAPHDS*PPDPGH Trigger: ATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGC...GTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGAGGGCTCCTCATGATTCCTaGCCTCCCGACCCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVPPRRCKPHTRSQSKERAPHDS*PPDPGH Trigger: ATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGC...CCTCTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACGCTCCTCATGATTCCTaGCCTCCCGACCCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ESILCAGNLVPPRRCKPHAPHDS*PPDPGH Trigger: ATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGC...GTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTCCAAACTTGGGTATCTaGACCTCTGGCAGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQVAIFMPLSLNLQSFWGPNLGI*TSGRKE Trigger: CTCCTTCCTGCCAGAGGTGCAGATACCCAAGTTTGG...ACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGTCAAGACTGGAACTaGATCCGGCTCACACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VAIFMPLSLNLQSFWGGGSQDWN*IRLTLQ Trigger: CTGGAGTGTGAGCCGGATCCAGTTCCAGTCTTGACT...TCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTTCAGAGCAGGGGCTATaGAGGAAGCAGACAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCAGNLVPPRRCKPHTRSSEQGL*RKQTAS Trigger: GGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGA...ACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | GGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGCCATCCTTTTGGAAGTaGAGCAGGGCTCTCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GHLHASQFEPAELLGWRKPSFWK*SRALST Trigger: TGTTGAGAGAGCCCTGCTTCACTTCCAAAAGGATGG...CTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | CATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGGAAACCATCCTTTTGGAAGTaGAGCAGGGCTCTCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HASQFEPAELLGWRKAGKPSFWK*SRALST Trigger: TGTTGAGAGAGCCCTGCTTCACTTCCAAAAGGATGG...TTTCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTGGAGTACTGCCAAAGTaGAGGGCTGGGAACTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGNLVPPRRCKPHTRSQSGVLPK*RAGNCE Trigger: CTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCC...AGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | AAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAAACAGCCTCCTCATaGTTCCTGCCCTCCCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCWEPSSSQKMQTTHKTASS*FLPSRP Trigger: GGGTCGGGAGGGCAGGAATCATGAGGAGGCTGTTTT...GTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160123.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCATGCCCACCGTCCAGTTaGCGGATGGGAATGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCWEPSSSQKMQTTHKKSCPPSS*RMGMLK Trigger: CTTCAACATTCCCATCCGGCAACTGGACGGTGGGCA...TGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTGCCCACCGTCCAGTTaGCGGATGGGAATGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVCWEPSSSQKMQTTHKKCPPSS*RMGMLK Trigger: CTTCAACATTCCCATCCGGCAACTGGACGGTGGGCA...CTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTTGCCCACCGTCCAGTTaGCGGATGGGAATGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGNLVPPRRCKPHTRSQSCPPSS*RMGMLK Trigger: CTTCAACATTCCCATCCGGCAACTGGACGGTGGGCA...AGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGACTGCTTTGCAGGCTGTaGGTTCATTGCTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VAIFMPLSLNLQSFWGGGLLCRL*VHCCLQ Trigger: CTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAG...TCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | CATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGGAAACTGCTTTGCAGGCTGTaGGTTCATTGCTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HASQFEPAELLGWRKAGKLLCRL*VHCCLQ Trigger: CTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAG...TTTCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GGTCACAGTTTCCAGAGTACCAAGGCTGACCCAGCAGACTACCATTCTCAGCAAAGTCAAGACTGGAACTaGATCCGGCTCACACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHSFQSTKADPADYHSQQSQDWN*IRLTLQ Trigger: CTGGAGTGTGAGCCGGATCCAGTTCCAGTCTTGACT...TTGCTGAGAATGGTAGTCTGCTGGGTCAGCCTTGGTACTCTGGAAACTGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | ATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGAGTCAAGACTGGAACTaGATCCGGCTCACACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IFMPLSLNLQSFWGGGRQSQDWN*IRLTLQ Trigger: CTGGAGTGTGAGCCGGATCCAGTTCCAGTCTTGACT...CTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGTCTTGGCAGAGGAACTaGAGGTATCAGGGCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHLHASQFEPAELLGWRKSWQRN*RYQGFG Trigger: TCCAAAGCCCTGATACCTCCAGTTCCTCTGCCAAGA...CTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGTCAGAGCAGGGGCTATaGAGGAAGCAGACAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTVCWEPSSSQKMQTTHKSEQGL*RKQTAS Trigger: GGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGA...CTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | AAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACTCAGAGCAGGGGCTATaGAGGAAGCAGACAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCWEPSSSQKMQTTHSEQGL*RKQTAS Trigger: GGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGA...GTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACTCAGAGCAGGGGCTATaGAGGAAGCAGACAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESILCAGNLVPPRRCKPHSEQGL*RKQTAS Trigger: GGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGA...GTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | AAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAGCCAGCCTCCCAGGTaGCCATCTTCATGCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCWEPSSSQKMQTTHSQPPR*PSSCLS Trigger: TGAGAGGCATGAAGATGGCCACCTGGGAGGCTGGCT...GTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160123.9 |
||
| CDS-3UTR CCA 90 bp | CGGATGGGAATGTTGAAGACACGGCCTCTGAGGAGTACTGCCAAAGTGAAGGGCCTTTCTCTCCAAACTTaGGTATCTGCACCTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RMGMLKTRPLRSTAKVKGLSLQT*VSAPLA Trigger: TGCCAGAGGTGCAGATACCCAAGTTTGGAGAGAAAG...GCCCTTCACTTTGGCAGTACTCCTCAGAGGCCGTGTCTTCAACATTCCCATCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | GTAGGCCCCATCCTTTTGGAAGTGAAGCAGGGCTCTCTCAACAGACTGACGGTCGCCAGACAGGAAAGATaGGTTGGCTCTACTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGPILLEVKQGSLNRLTVARQER*VGSTFS Trigger: AGAGAAAGTAGAGCCAACCCATCTTTCCTGTCTGGC...GACCGTCAGTCTGTTGAGAGAGCCCTGCTTCACTTCCAAAAGGATGGGGCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | AACAGACTGACGGTCACAGTTTCCAGAGTACCAAGGCTGACCCAGCAGACTACCTCTTCTCCCTCTTCCTaGGCCTTCAAAAAGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NRLTVTVSRVPRLTQQTTSSPSS*AFKKGC Trigger: GCATCCCTTTTTGAAGGCCCAGGAAGAGGGAGAAGA...GGTAGTCTGCTGGGTCAGCCTTGGTACTCTGGAAACTGTGACCGTCAGTCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS-3UTR TCA 90 bp | CTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTGCTCTCTCAACAGACTaGCGGTCACAGTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCAGNLVPPRRCKPHTRSALSTD*RSQFPE Trigger: CTCTGGAAACTGTGACCGTCAGTCTGTTGAGAGAGC...ACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | TATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGGGAGTACTGCCAAAGTaGAGGGCTGGGAACTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YTVCWEPSSSQKMQTTHKGVLPK*RAGNCE Trigger: CTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCC...CTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | AAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACGGAGTACTGCCAAAGTaGAGGGCTGGGAACTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCWEPSSSQKMQTTHGVLPK*RAGNCE Trigger: CTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCC...GTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | AGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACATGCCCACCGTCCAGTTaGCGGATGGGAATGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SILCAGNLVPPRRCKPHTCPPSS*RMGMLK Trigger: CTTCAACATTCCCATCCGGCAACTGGACGGTGGGCA...TGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGAGTCAAGACTGGAACTaGATCCGGCTCACACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVCWEPSSSQKMQTTHKKSQDWN*IRLTLQ Trigger: CTGGAGTGTGAGCCGGATCCAGTTCCAGTCTTGACT...CTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAGAGTACCAAGGCTGACCCAGCAGACTACCATTCTCAGCAACAGAGCTTCTTGGCAGAGGAACTaGAGGTATCAGGGCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSRVPRLTQQTTILSNRASWQRN*RYQGFG Trigger: TCCAAAGCCCTGATACCTCCAGTTCCTCTGCCAAGA...AGCTCTGTTGCTGAGAATGGTAGTCTGCTGGGTCAGCCTTGGTACTCTGGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | CATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGGAAAAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HASQFEPAELLGWRKAGKNQPLT*AIQMFL Trigger: CAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTT...TTTCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGGCCAGACAGGAAAGATaGGTTGGCTCTACTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIFMPLSLNLQSFWGGGRARQER*VGSTFS Trigger: AGAGAAAGTAGAGCCAACCCATCTTTCCTGTCTGGC...CCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGGTTTCTCCAGGTCTCTaGGCCAGACAGGAAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TVCWEPSSSQKMQTTHKKVSPGL*ARQERW Trigger: CCATCTTTCCTGTCTGGCCCAGAGACCTGGAGAAAC...CTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR TCA 90 bp | AAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACGCTCTCTCAACAGACTaGCGGTCACAGTTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCWEPSSSQKMQTTHALSTD*RSQFPE Trigger: CTCTGGAAACTGTGACCGTCAGTCTGTTGAGAGAGC...GTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAAGGAAGCGCAGGTAGGTaGGTCCCCGGTTGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FIESILCAGNLVPPRRCKGSAGR*VPGCHC Trigger: ACAGTGGCAACCGGGGACTCACCTACCTGCGCTTCC...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | AGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAACAGGTCCCTGCTTTaGAGGCTGTGGGTTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SILCAGNLVPPRRCKPHTNRSLL*RLWVHC Trigger: GCAATGAACCCACAGCCTGCAAAGCAGGGACCTGTT...TGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCCTGCTTTGCAGGCTGTaGGTTCATTGCTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CWEPSSSQKMQTTHKKSVLLCRL*VHCCLQ Trigger: CTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAG...GACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTCTGCTTTGCAGGCTGTaGGTTCATTGCTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGNLVPPRRCKPHTRSQSLLCRL*VHCCLQ Trigger: CTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAG...AGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAGTCAAGACTGGAACTaGATCCGGCTCACACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YTVCWEPSSSQKMQTTHKSQDWN*IRLTLQ Trigger: CTGGAGTGTGAGCCGGATCCAGTTCCAGTCTTGACT...CTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTCAATCCAGATGTTCTTaGCAGAGGAACTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SQVAIFMPLSLNLQSFWGQSRCS*QRNWRY Trigger: ATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTG...ACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAATCCAGATGTTCTTaGCAGAGGAACTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AIFMPLSLNLQSFWGGGRQSRCS*QRNWRY Trigger: ATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTG...CCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | CTGACGGTCACAGTTTCCAGAGTACCAAGGCTGACCCAGCAGACTACCATTCTCCAATCCAGATGTTCTTaGCAGAGGAACTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LTVTVSRVPRLTQQTTILQSRCS*QRNWRY Trigger: ATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTG...GAGAATGGTAGTCTGCTGGGTCAGCCTTGGTACTCTGGAAACTGTGACCGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | TTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGGACAATCCAGATGTTCTTaGCAGAGGAACTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FMPLSLNLQSFWGGGRQGQSRCS*QRNWRY Trigger: ATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTG...TCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | CATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLHASQFEPAELLGWRKANQPLT*AIQMFL Trigger: CAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTT...TGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAATCTGGCAGGAAGGAGTaGTGGCCCCAACCGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FIESILCAGNLVPPRRCKSGRKE*WPQPGL Trigger: AAGGCCCGGTTGGGGCCACCACTCCTTCCTGCCAGA...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGAGGCCATCCTTTTGGAAGTaGAGCAGGGCTCTCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LVPPRRCKPHTRSQSKERPSFWK*SRALST Trigger: TGTTGAGAGAGCCCTGCTTCACTTCCAAAAGGATGG...CCTCTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | ATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCAGGAGTACTGCCAAAGTaGAGGGCTGGGAACTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IESILCAGNLVPPRRCKPGVLPK*RAGNCE Trigger: CTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCC...TGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | ATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCATGCCCACCGTCCAGTTaGCGGATGGGAATGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IESILCAGNLVPPRRCKPCPPSS*RMGMLK Trigger: CTTCAACATTCCCATCCGGCAACTGGACGGTGGGCA...TGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAAGCTCCTCATGATTCCTaGCCTCCCGACCCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FIESILCAGNLVPPRRCKAPHDS*PPDPGH Trigger: ATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGC...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCTCCTCATGATTCCTaGCCTCCCGACCCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FIESILCAGNLVPPRRCKPPHDS*PPDPGH Trigger: ATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGG...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160123.9 |
||
| CDS-3UTR GCA 90 bp | TGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCGCCTTCAAAAAGGGATaGCTGTTTCTCCAGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CWEPSSSQKMQTTHKKSVAFKKG*LFLQVS Trigger: AGAGACCTGGAGAAACAGGCATCCCTTTTTGAAGGC...GACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CCA 90 bp | ATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCAGGAAGGAAGGGTTTATaGGGAGTCCTCTGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: IESILCAGNLVPPRRCKPGRKGL*GVLWPW Trigger: CCATGGCCAGAGGACTCCCCATAAACCCTTCCTTCC...TGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089687.11 ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACCTGCTTTGCAGGCTGTaGGTTCATTGCTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESILCAGNLVPPRRCKPHLLCRL*VHCCLQ Trigger: CTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAG...GTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGACTGCTTTGCAGGCTGTaGGTTCATTGCTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILCAGNLVPPRRCKPHTRLLCRL*VHCCLQ Trigger: CTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAG...TCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | AACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGAGTCAAGACTGGAACTaGATCCGGCTCACACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLVPPRRCKPHTRSQSKESQDWN*IRLTLQ Trigger: CTGGAGTGTGAGCCGGATCCAGTTCCAGTCTTGACT...CTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACTCTTGGCAGAGGAACTaGAGGTATCAGGGCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESILCAGNLVPPRRCKPHSWQRN*RYQGFG Trigger: TCCAAAGCCCTGATACCTCCAGTTCCTCTGCCAAGA...GTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | CTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGAGGTCTTGGCAGAGGAACTaGAGGTATCAGGGCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVPPRRCKPHTRSQSKERSWQRN*RYQGFG Trigger: TCCAAAGCCCTGATACCTCCAGTTCCTCTGCCAAGA...CCTCTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | AAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACTCTTGGCAGAGGAACTaGAGGTATCAGGGCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCWEPSSSQKMQTTHSWQRN*RYQGFG Trigger: TCCAAAGCCCTGATACCTCCAGTTCCTCTGCCAAGA...GTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCWEPSSSQKMQTTHKKSNQPLT*AIQMFL Trigger: CAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTT...TGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCACAATCCAGATGTTCTTaGCAGAGGAACTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VCWEPSSSQKMQTTHKKSQSRCS*QRNWRY Trigger: ATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTG...TGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTCAATCCAGATGTTCTTaGCAGAGGAACTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AGNLVPPRRCKPHTRSQSQSRCS*QRNWRY Trigger: ATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTG...AGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILCAGNLVPPRRCKPHTRNQPLT*AIQMFL Trigger: CAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTT...TCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YTVCWEPSSSQKMQTTHKNQPLT*AIQMFL Trigger: CAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTT...CTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESILCAGNLVPPRRCKPHNQPLT*AIQMFL Trigger: CAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTT...GTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | CTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGAGGAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVPPRRCKPHTRSQSKERNQPLT*AIQMFL Trigger: CAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTT...CCTCTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAATCAGAGCAGGGGCTATaGAGGAAGCAGACAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIESILCAGNLVPPRRCKSEQGL*RKQTAS Trigger: GGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGA...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGACTTTCTCTCCAAACTTaGGTATCTGCACCTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILCAGNLVPPRRCKPHTRLSLQT*VSAPLA Trigger: TGCCAGAGGTGCAGATACCCAAGTTTGGAGAGAAAG...TCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAGAGTACCAAGGCTGACCCAGCAGACTACCATTCTCAGCAACAGAGCTACAGGAAAGATGGGTTaGCTCTACTTTCTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSRVPRLTQQTTILSNRATGKMG*LYFLSK Trigger: TTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGT...AGCTCTGTTGCTGAGAATGGTAGTCTGCTGGGTCAGCCTTGGTACTCTGGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS-3UTR CCA 90 bp | AACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGTCTTCTCCCTCTTCCTaGGCCTTCAAAAAGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NLVPPRRCKPHTRSQSKESSPSS*AFKKGC Trigger: GCATCCCTTTTTGAAGGCCCAGGAAGAGGGAGAAGA...CTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTCTTGGGACACATACTaGCTGCTTTTCGAGTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CWEPSSSQKMQTTHKKSVSWDTY*LLFELV Trigger: CACTAACTCGAAAAGCAGCCAGTATGTGTCCCAAGA...GACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234220.2 |
||
| CDS-3UTR TCA 90 bp | ATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACCATCCTTTTGGAAGTaGAGCAGGGCTCTCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: IESILCAGNLVPPRRCKPPSFWK*SRALST Trigger: TGTTGAGAGAGCCCTGCTTCACTTCCAAAAGGATGG...TGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR TCA 90 bp | TATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGTTTCCAAGTGAGAACTaGTCTTGGGACACATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTVCWEPSSSQKMQTTHKFPSEN*SWDTYW Trigger: CCAGTATGTGTCCCAAGATCAGTTCTCACTTGGAAA...CTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234220.2 |
||
| CDS-3UTR CCA 90 bp | ATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACTGCTTTGCAGGCTGTaGGTTCATTGCTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IESILCAGNLVPPRRCKPLLCRL*VHCCLQ Trigger: CTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAG...TGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | ATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCATCTTGGCAGAGGAACTaGAGGTATCAGGGCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IESILCAGNLVPPRRCKPSWQRN*RYQGFG Trigger: TCCAAAGCCCTGATACCTCCAGTTCCTCTGCCAAGA...TGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGCAATCCAGATGTTCTTaGCAGAGGAACTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YTVCWEPSSSQKMQTTHKQSRCS*QRNWRY Trigger: ATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTG...CTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | AAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACCAATCCAGATGTTCTTaGCAGAGGAACTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KYTVCWEPSSSQKMQTTHQSRCS*QRNWRY Trigger: ATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTG...GTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACCAATCCAGATGTTCTTaGCAGAGGAACTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ESILCAGNLVPPRRCKPHQSRCS*QRNWRY Trigger: ATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTG...GTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAAAACCTGCAGAGCTTTTaGGGTGGAGGAAGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FIESILCAGNLVPPRRCKNLQSF*GGGRQG Trigger: TCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTT...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160123.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAACAGGAAAGATGGGTTaGCTCTACTTTCTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VCWEPSSSQKMQTTHKKSTGKMG*LYFLSK Trigger: TTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGT...TGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAAAGTCAAGACTGGAACTaGATCCGGCTCACACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FIESILCAGNLVPPRRCKSQDWN*IRLTLQ Trigger: CTGGAGTGTGAGCCGGATCCAGTTCCAGTCTTGACT...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACTGCTTTGCAGGCTGTaGGTTCATTGCTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FIESILCAGNLVPPRRCKLLCRL*VHCCLQ Trigger: CTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAG...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAAAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FIESILCAGNLVPPRRCKNQPLT*AIQMFL Trigger: CAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTT...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACAATCCAGATGTTCTTaGCAGAGGAACTGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FIESILCAGNLVPPRRCKQSRCS*QRNWRY Trigger: ATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTG...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGCCACAGAGGGGGCAGTGGTGGCTaGGATGGATCCAGGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VHKGQGVLRVMLNHGGHRGGSGG*DGSRGP Trigger: TGGGCCCCTGGATCCATCCAAGCCACCACTGCCCCC...TCTGTGGCCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS GCA 90 bp | GGGTGGAGGAAGGCAGGGAAAAGAAAACAGCCTCCTCATGATTCCTaGCCTCCCGACCCAGGGCATAGTGGTGCCCACCGTCCAGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GWRKAGKRKQPPHDS*PPDPGHSGAHRPVA Trigger: GGCAACTGGACGGTGGGCACCACTATGCCCTGGGTCGGGAGGGCAGGAATCATGAGGAGGCTGTTTTCTTTTCCCTGCCTTCCTCCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160123.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCCGACCCAGGGCATAGTGGTGCCCACCGTCCAGTTGCCGGATGGGAATGTGGAGGTATCAGGGCTTaGGAGCTCAGAGACCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PPDPGHSGAHRPVAGWECGGIRA*ELRDLV Trigger: GACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTCC...ACATTCCCATCCGGCAACTGGACGGTGGGCACCACTATGCCCTGGGTCGGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS CCA 90 bp | GGGCCAGACAGGAAAGATGGGTTGGCTCTACTTTCTCTCCAAACTTaGGTATCTGCACCTCTGGCAGGAAGGAGTGGTGGCCCCAACCGG | + |
|
Preference number: 5 (lower is better) Translates to: GPDRKDGLALLSLQT*VSAPLAGRSGGPNR Trigger: CCGGTTGGGGCCACCACTCCTTCCTGCCAGAGGTGCAGATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGTCTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CAA 90 bp | ACGGCCTCTGAGGAGTACTGCCAAAGTGAAGGGCTGGGAACTGTGAGGCCCAGAGGAGGTATCAGGGCTTaGGAGCTCAGAGACCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TASEEYCQSEGLGTVRPRGGIRA*ELRDLV Trigger: GACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTCC...TCTGGGCCTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTCCTCAGAGGCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS GCA 90 bp | GCTACTCAGAGCAGGGGCTATGGAGGAAGCAGACAGCCTCCTTCCTaGTTTCAACGCACCATCCATAGCTCCATTCCGAGCCTCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ATQSRGYGGSRQPPS*FQRTIHSSIPSLLV Trigger: TACCAGGAGGCTCGGAATGGAGCTATGGATGGTGCGTTGAAAGCAGGAAGGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGAGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS GCA 90 bp | CAGGAAAGATGGGTTGGCTCTACTTTCTCTCCAAACTTGGGTATCTaGACCTCTGGCAGGAAGGAGTGGTGGCCCCAACCGGGCCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QERWVGSTFSPNLGI*TSGRKEWWPQPGLA Trigger: AGCAAGGCCCGGTTGGGGCCACCACTCCTTCCTGCCAGAGGTGCAGATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CAA 90 bp | TATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGGGGGGCAGTGGTGGCTaGGATGGATCCAGGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YTVCWEPSSSQKMQTTHKGGSGG*DGSRGP Trigger: TGGGCCCCTGGATCCATCCAAGCCACCACTGCCCCC...CTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000089687.11 ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACGGGGGCAGTGGTGGCTaGGATGGATCCAGGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ESILCAGNLVPPRRCKPHGGSGG*DGSRGP Trigger: TGGGCCCCTGGATCCATCCAAGCCACCACTGCCCCC...GTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089687.11 ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCGTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGGCAATCCAGATGTTCTaGGCAGAGGAACTGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CVRPQGAGGASCNAEPWRAIQMF*AEELEV Trigger: TACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGC...CCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGACGGACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR CAA 90 bp | GTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGCCACAGAGCAATCCAGATGTTCTaGGCAGAGGAACTGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VHKGQGVLRVMLNHGGHRAIQMF*AEELEV Trigger: TACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGC...TCTGTGGCCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGCCGGATGGGAATGTaGAAGACACGGCCTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGGHLHASQFEPAELLGCRMGM*KTRPLR Trigger: CCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCA...CCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GAGTACTGCCAAAGTGAAGGGCTGGGAACTGTGAGGCCCAGAGCTGAGGCGCACACTTTCTCTCCAAACTaGGGTATCTGCACCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EYCQSEGLGTVRPRAEAHTFSPN*GICTSG Trigger: GCCAGAGGTGCAGATACCCAAGTTTGGAGAGAAAGT...GTGCGCCTCAGCTCTGGGCCTCACAGTTCCCAGCCCTTCACTTTGGCAGTACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS-3UTR CAA 90 bp | GTCCGTCCACAAGGGGCAGGGGGTGCTTCGTGTAATGCTGAACCATGGCGGCCAGACAGGAAAGATGGGTaGGCTCTACTTTCTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VRPQGAGGASCNAEPWRPDRKDG*ALLSLQ Trigger: TTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGTC...TGGCCGCCATGGTTCAGCATTACACGAAGCACCCCCTGCCCCTTGTGGACGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS GCA 90 bp | GCTACTCAGAGCAGGGGCTATGGAGGAAGCAGACAGCCTCCTTCCTaGAGACAGGCCTTGCCTGATTTCCAAGTGAGAACTGATCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATQSRGYGGSRQPPS*RQALPDFQVRTDLG Trigger: CCCAAGATCAGTTCTCACTTGGAAATCAGGCAAGGCCTGTCTGCAGGAAGGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGAGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234220.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCTAAAGTGGGAGAGAAAGTGAATGGGGCACACATCACGTGCCTGAGGGGGAGATGTACCTCGCCCTaGCCTTCCAAAAACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPKVGEKVNGAHITCLRGRCTSP*PSKNRS Trigger: GGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCT...CCCCCTCAGGCACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTTTAGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | ACCGTCCAGTTGCCGGATGGGAATGTTGAAGACACGGCCTCTGAGGAGTACTGCAGATGTACCTCGCCCTaGCCTTCCAAAAACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVQLPDGNVEDTASEEYCRCTSP*PSKNRS Trigger: GGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCT...GCAGTACTCCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCAACTGGACGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGGGAGGTATCAGGGCTTaGGAGCTCAGAGACCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PGGHLHASQFEPAELLGWGGIRA*ELRDLV Trigger: GACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTCC...CCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | TTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGGATGCCGGATGGGAATGTaGAAGACACGGCCTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FMPLSLNLQSFWGGGRQGCRMGM*KTRPLR Trigger: CCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCA...TCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | CATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGGGAAAGTGCCCACCGTCCAGTaGCCGGATGGGAATGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HASQFEPAELLGWRKAGKVPTVQ*PDGNVE Trigger: TTCAACATTCCCATCCGGCAACTGGACGGTGGGCAC...TTTCCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGTGCCCACCGTCCAGTaGCCGGATGGGAATGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GHLHASQFEPAELLGWRKVPTVQ*PDGNVE Trigger: TTCAACATTCCCATCCGGCAACTGGACGGTGGGCAC...CTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS TCA 90 bp | CAGACAGCCTCCTTCCTGATTCCGAGCCTCCTGGTAACCAGCCACTaGCTTGGGCAATCCAGATGTTCTTGGCAGAGGAACTGGAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QTASFLIPSLLVTSH*LGQSRCSWQRNWRY Trigger: ATACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTTACCAGGAGGCTCGGAATCAGGAAGGAGGCTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159577.3 |
||
| CDS GCA 90 bp | AGCAGATGTACCTCGCCCTTGCCTTCCAAAAACAGGTCCCTGCTTTaGAGGCTGTGGGTTCATTGCTGTCTTCAGCGGGAAATGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRCTSPLPSKNRSLL*RLWVHCCLQREMVA Trigger: GGCTACCATTTCCCGCTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS CCA 90 bp | GCAGACTACCATTCTCAGCAACAGAGCTACTCAGAGCAGGGGCTATaGAGGAAGCAGACAGCCTCCTTCCTGCTTTCAACGCACCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: ADYHSQQQSYSEQGL*RKQTASFLLSTHHP Trigger: TGGATGGTGCGTTGAAAGCAGGAAGGAGGCTGTCTGCTTCCTCCATAGCCCCTGCTCTGAGTAGCTCTGTTGCTGAGAATGGTAGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGAAACAGGTCCCTGCTTaGCAGGCTGTGGGTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LPGGHLHASQFEPAELLGKQVPA*QAVGSL Trigger: CAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTT...CCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTCAGGCTGTGGGTTCATaGCTGTCTTCAGCGGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SQVAIFMPLSLNLQSFWGQAVGS*LSSAGN Trigger: ATTTCCCGCTGAAGACAGCAATGAACCCACAGCCTG...ACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | AGTTGCCGGATGGGAATGTTGAAGACACGGCCTCTGAGGAGTACTGCCAAAGTGAAACAGGTCCCTGCTTaGCAGGCTGTGGGTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SCRMGMLKTRPLRSTAKVKQVPA*QAVGSL Trigger: CAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTT...CACTTTGGCAGTACTCCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159577.3 ENSMUST00000160761.3 |
||
| CDS-3UTR CAA 90 bp | GCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGAAACAGGTCCCTGCTTaGCAGGCTGTGGGTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: AIFMPLSLNLQSFWGGGRKQVPA*QAVGSL Trigger: CAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTT...CCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTTGCCGGATGGGAATGTaGAAGACACGGCCTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGNLVPPRRCKPHTRSQSCRMGM*KTRPLR Trigger: CCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCA...AGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGGTGCCCACCGTCCAGTaGCCGGATGGGAATGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TVCWEPSSSQKMQTTHKKVPTVQ*PDGNVE Trigger: TTCAACATTCCCATCCGGCAACTGGACGGTGGGCAC...CTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACGAACCTGCAGAGCTTTaGGGGTGGAGGAAGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ESILCAGNLVPPRRCKPHEPAEL*GWRKAG Trigger: CCCTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTC...GTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160123.9 |
||
| CDS GCA 90 bp | ATTCTAGCAGATGTACCTCGCCCTTGCCTTCCAAAAACAGGTCCCTaGTTTGCAGGCTGTGGGTTCATTGCTGTCTTCAGCGGGAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: ILADVPRPCLPKTGP*FAGCGFIAVFSGKW Trigger: CCATTTCCCGCTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCTGCTAGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGCAGGCTGTGGGTTCATaGCTGTCTTCAGCGGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IFMPLSLNLQSFWGGGRQQAVGS*LSSAGN Trigger: ATTTCCCGCTGAAGACAGCAATGAACCCACAGCCTG...CTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGCAGAGATGTACCTCGCCCTaGCCTTCCAAAAACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IFMPLSLNLQSFWGGGRQRCTSP*PSKNRS Trigger: GGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCT...CTGCCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGGAGGTATCAGGGCTTaGGAGCTCAGAGACCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VCWEPSSSQKMQTTHKKSGGIRA*ELRDLV Trigger: GACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTCC...TGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTGGAGGTATCAGGGCTTaGGAGCTCAGAGACCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGNLVPPRRCKPHTRSQSGGIRA*ELRDLV Trigger: GACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTCC...AGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTGGGAGAGAAAGTGAATGGGGCACACATCACGTGCCTGAGGGGGATCTGTGCAATCCAGATGTTCTaGGCAGAGGAACTGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KVGEKVNGAHITCLRGICAIQMF*AEELEV Trigger: TACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGC...ACAGATCCCCCTCAGGCACGTGATGTGTGCCCCATTCACTTTCTCTCCCACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGCAATCCAGATGTTCTaGGCAGAGGAACTGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QVAIFMPLSLNLQSFWGGAIQMF*AEELEV Trigger: TACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGC...TCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGGAAGGGCAATCCAGATGTTCTaGGCAGAGGAACTGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AIFMPLSLNLQSFWGGGRAIQMF*AEELEV Trigger: TACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGC...CCTTCCTCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACTGCCGGATGGGAATGTaGAAGACACGGCCTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESILCAGNLVPPRRCKPHCRMGM*KTRPLR Trigger: CCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCA...GTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | CTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGAGGTGCCGGATGGGAATGTaGAAGACACGGCCTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVPPRRCKPHTRSQSKERCRMGM*KTRPLR Trigger: CCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCA...CCTCTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACGTGCCCACCGTCCAGTaGCCGGATGGGAATGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ESILCAGNLVPPRRCKPHVPTVQ*PDGNVE Trigger: TTCAACATTCCCATCCGGCAACTGGACGGTGGGCAC...GTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | AGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAGTGCCCACCGTCCAGTaGCCGGATGGGAATGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SILCAGNLVPPRRCKPHTVPTVQ*PDGNVE Trigger: TTCAACATTCCCATCCGGCAACTGGACGGTGGGCAC...TGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | ATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAGTGCCCACCGTCCAGTaGCCGGATGGGAATGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ILCAGNLVPPRRCKPHTRVPTVQ*PDGNVE Trigger: TTCAACATTCCCATCCGGCAACTGGACGGTGGGCAC...TCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | AAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACGTGCCCACCGTCCAGTaGCCGGATGGGAATGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KYTVCWEPSSSQKMQTTHVPTVQ*PDGNVE Trigger: TTCAACATTCCCATCCGGCAACTGGACGGTGGGCAC...GTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS TCA 90 bp | GCAGACAGCCTCCTTCCTGCAGACAGGCCTTGCCTGATTTCCAAGTaGGAACTGATCTTGGGACACATACTGGCTGCTTTTCGAGTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: ADSLLPADRPCLISK*ELILGHILAAFRVS Trigger: ACTAACTCGAAAAGCAGCCAGTATGTGTCCCAAGATCAGTTCTCACTTGGAAATCAGGCAAGGCCTGTCTGCAGGAAGGAGGCTGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234220.2 |
||
| CDS GCA 90 bp | TATTTATCCTCCTCTTCTCCCTCTTCCTGGGCCTTCAAAAAGGGATaGCTGTTTCTCCAGGTCTCTGGGCCAGACAGGAAAGATGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YLSSSSPSSWAFKKG*LFLQVSGPDRKDGL Trigger: CAACCCATCTTTCCTGTCTGGCCCAGAGACCTGGAGAAACAGGCATCCCTTTTTGAAGGCCCAGGAAGAGGGAGAAGAGGAGGATAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS CCA 90 bp | GACTGGAACTGGATCCGGCTCACACTCCAGGTAGATGTCCTCATCTaGTTTCTTTGTTACCATTCTAGCAGATGTACCTCGCCCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DWNWIRLTLQVDVLI*FLCYHSSRCTSPLP Trigger: AGGCAAGGGCGAGGTACATCTGCTAGAATGGTAACAAAGAAACCAGATGAGGACATCTACCTGGAGTGTGAGCCGGATCCAGTTCCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAAAACAGGTCCCTGCTTaGCAGGCTGTGGGTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VCWEPSSSQKMQTTHKKSKQVPA*QAVGSL Trigger: CAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTT...TGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGAGATGTACCTCGCCCTaGCCTTCCAAAAACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVCWEPSSSQKMQTTHKKRCTSP*PSKNRS Trigger: GGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCT...CTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAAGATGTACCTCGCCCTaGCCTTCCAAAAACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCWEPSSSQKMQTTHKKSRCTSP*PSKNRS Trigger: GGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCT...TGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | ATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAGGAGGTATCAGGGCTTaGGAGCTCAGAGACCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILCAGNLVPPRRCKPHTRGGIRA*ELRDLV Trigger: GACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTCC...TCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | AACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGTGCCGGATGGGAATGTaGAAGACACGGCCTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLVPPRRCKPHTRSQSKECRMGM*KTRPLR Trigger: CCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCA...CTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTGGCCATCTTCATGCCTCTCAGTTTGAACCTGCAGAGCTTTTGGGGTGGAGACAGGAAAGATGGGTaGGCTCTACTTTCTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QVAIFMPLSLNLQSFWGGDRKDG*ALLSLQ Trigger: TTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGTC...TCCACCCCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAAGATGGCCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS-3UTR CAA 90 bp | ATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAAACAGGTCCCTGCTTaGCAGGCTGTGGGTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: ILCAGNLVPPRRCKPHTRKQVPA*QAVGSL Trigger: CAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTT...TCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | AGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAAACAGGTCCCTGCTTaGCAGGCTGTGGGTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SILCAGNLVPPRRCKPHTKQVPA*QAVGSL Trigger: CAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTT...TGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | CTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGAGGAGATGTACCTCGCCCTaGCCTTCCAAAAACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVPPRRCKPHTRSQSKERRCTSP*PSKNRS Trigger: GGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCT...CCTCTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | ATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGATGTACCTCGCCCTaGCCTTCCAAAAACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILCAGNLVPPRRCKPHTRRCTSP*PSKNRS Trigger: GGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCT...TCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | TATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAGATGTACCTCGCCCTaGCCTTCCAAAAACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YTVCWEPSSSQKMQTTHKRCTSP*PSKNRS Trigger: GGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCT...CTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | AACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGGGAGGTATCAGGGCTTaGGAGCTCAGAGACCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NLVPPRRCKPHTRSQSKEGGIRA*ELRDLV Trigger: GACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTCC...CTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | ATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCAGTGCCCACCGTCCAGTaGCCGGATGGGAATGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IESILCAGNLVPPRRCKPVPTVQ*PDGNVE Trigger: TTCAACATTCCCATCCGGCAACTGGACGGTGGGCAC...TGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | AACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGAAGTCAGTCTAAGGAGAAACAGGTCCCTGCTTaGCAGGCTGTGGGTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: NLVPPRRCKPHTRSQSKEKQVPA*QAVGSL Trigger: CAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTT...CTCCTTAGACTGACTTCTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | ATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCAGGAGGTATCAGGGCTTaGGAGCTCAGAGACCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IESILCAGNLVPPRRCKPGGIRA*ELRDLV Trigger: GACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTCC...TGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACGCAATCCAGATGTTCTaGGCAGAGGAACTGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ESILCAGNLVPPRRCKPHAIQMF*AEELEV Trigger: TACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGC...GTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | AAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACGCAATCCAGATGTTCTaGGCAGAGGAACTGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KYTVCWEPSSSQKMQTTHAIQMF*AEELEV Trigger: TACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGC...GTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | TATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAAGGCAATCCAGATGTTCTaGGCAGAGGAACTGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: YTVCWEPSSSQKMQTTHKAIQMF*AEELEV Trigger: TACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGC...CTTGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | AGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACACAGCAATCCAGATGTTCTaGGCAGAGGAACTGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SILCAGNLVPPRRCKPHTAIQMF*AEELEV Trigger: TACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGC...TGTGTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS GCA 90 bp | TCATCTGGTTTCTTTGTTACCATTCTAGCAGATGTACCTCGCCCTTaGCTTCCAAAAACAGGTCCCTGCTTTGCAGGCTGTGGGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: SSGFFVTILADVPRP*LPKTGPCFAGCGFI Trigger: AATGAACCCACAGCCTGCAAAGCAGGGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCTGCTAGAATGGTAACAAAGAAACCAGATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAATGCCGGATGGGAATGTaGAAGACACGGCCTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FIESILCAGNLVPPRRCKCRMGM*KTRPLR Trigger: CCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCA...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCACACTTCATGCCTCTCAGTTaGAACCTGCAGAGCTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ESILCAGNLVPPRRCKPHFMPLS*NLQSFW Trigger: CCAAAAGCTCTGCAGGTTCAAACTGAGAGGCATGAA...GTGTGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160123.9 |
||
| CDS-3UTR CAA 90 bp | ATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAACCAGCAATCCAGATGTTCTaGGCAGAGGAACTGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: IESILCAGNLVPPRRCKPAIQMF*AEELEV Trigger: TACCTCCAGTTCCTCTGCCAAGAACATCTGGATTGC...TGGTTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAAAGATGTACCTCGCCCTaGCCTTCCAAAAACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FIESILCAGNLVPPRRCKRCTSP*PSKNRS Trigger: GGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCT...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTGAAAGTATACTGTGTGCTGGGAACCTAGTTCCTCCCAGAAGATGCAAAACTTTCTCTCCAAACTaGGGTATCTGCACCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FIESILCAGNLVPPRRCKTFSPN*GICTSG Trigger: GCCAGAGGTGCAGATACCCAAGTTTGGAGAGAAAGT...TTTGCATCTTCTGGGAGGAACTAGGTTCCCAGCACACAGTATACTTTCAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS TCA 72 bp | GAAGGGTTTATGGGGAGTCCTCTGGCCATGGTAGACTaGGGCGGGGGCAGTGGTGGCTTGGATGGATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EGFMGSPLAMVD*GGGSGGLDGSR Trigger: CCTGGATCCATCCAAGCCACCACTGCCCCCGCCTCAGTCTACCATGGCCAGAGGACTCCCCATAAACCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089687.11 ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS CCA 72 bp | AACTTGGGTATCTGCACCTCTGGCAGGAAGGAGTGGTaGCCCCAACCGGGCCTTGCTGCCACTGAACCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: NLGICTSGRKEW*PQPGLAATEPV Trigger: GACAGGTTCAGTGGCAGCAAGGCCCGGTTGGGGCCACCACTCCTTCCTGCCAGAGGTGCAGATACCCAAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS CCA 72 bp | CCAAACTTGGGTATCTGCACCTCTGGCAGGAAGGAGTaGTGGCCCCAACCGGGCCTTGCTGCCACTGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: PNLGICTSGRKE*WPQPGLAATEP Trigger: AGGTTCAGTGGCAGCAAGGCCCGGTTGGGGCCACCACTCCTTCCTGCCAGAGGTGCAGATACCCAAGTTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS GCA 72 bp | CAGATACAAGGAGTCGTCTTTAGAGCCAAGAGACTGTaGAGGGGCCAGACTGACGGGCAGCCTCACAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QIQGVVFRAKRL*RGQTDGQPHRG Trigger: CCCCCTGTGAGGCTGCCCGTCAGTCTGGCCCCTGCACAGTCTCTTGGCTCTAAAGACGACTCCTTGTATCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089687.11 |
||
| CDS CCA 72 bp | CATGGTAGACTGAGGCGGGGGCAGTGGTGGCTTGGATaGATCCAGGGGCCCAGAACGATCCAGATACAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HGRLRRGQWWLG*IQGPRTIQIQG Trigger: TCCTTGTATCTGGATCGTTCTGGGCCCCTGGATCCATCCAAGCCACCACTGCCCCCGCCTCAGTCTACCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089687.11 ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS CAA 90 bp | TGGGCCAGACAGGAAAGATGGGTTGGCTCTACTTTCTCTCCAAACTaGGGTATCTGCACCTCTGGCAGGAAGGAGTGGTGGCCCCAACCG | + |
|
Preference number: 6 (lower is better) Translates to: WARQERWVGSTFSPN*GICTSGRKEWWPQP Trigger: CGGTTGGGGCCACCACTCCTTCCTGCCAGAGGTGCAGATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGTCTGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS TCA 72 bp | GAGCAGGGGATTCCGAGCCTCCTGGTAACCAGCCACTaGCTTGGGCAATCCAGATGTTCTTGGCAGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: EQGIPSLLVTSH*LGQSRCSWQRN Trigger: GTTCCTCTGCCAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTTACCAGGAGGCTCGGAATCCCCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS GCA 72 bp | AGCAGGGGCTATGGAGGAAGCAGACAGCCTCCTTCCTaGTTTCAACGCACCATCCATAGCTCCATTCCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRGYGGSRQPPS*FQRTIHSSIPS Trigger: GCTCGGAATGGAGCTATGGATGGTGCGTTGAAAGCAGGAAGGAGGCTGTCTGCTTCCTCCATAGCCCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS GCA 72 bp | TGGGTTGGCTCTACTTTCTCTCCAAACTTGGGTATCTaGACCTCTGGCAGGAAGGAGTGGTGGCCCCAACCG | + |
|
Preference number: 6 (lower is better) Translates to: WVGSTFSPNLGI*TSGRKEWWPQP Trigger: CGGTTGGGGCCACCACTCCTTCCTGCCAGAGGTGCAGATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS GCA 72 bp | CAGATACAAGGAGTCGTCTTTAGAGCCAAGAGACTGTaGAGGGGCCAGACTGACGGGCAGAACCTCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QIQGVVFRAKRL*RGQTDGQNLTG Trigger: CCCTGTGAGGTTCTGCCCGTCAGTCTGGCCCCTGCACAGTCTCTTGGCTCTAAAGACGACTCCTTGTATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS CCA 72 bp | GGGGATTCCGAGCCTCCTGGTAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTGGCAGAGGAACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GDSEPPGNQPLT*AIQMFLAEELE Trigger: CTCCAGTTCCTCTGCCAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTTACCAGGAGGCTCGGAATCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160761.3 |
||
| CDS CCA 72 bp | CTCCATTCCGAGCCTCCTGGTAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTGGCAGAGGAACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LHSEPPGNQPLT*AIQMFLAEELE Trigger: CTCCAGTTCCTCTGCCAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTTACCAGGAGGCTCGGAATGGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS CCA 72 bp | CCTGATTCCGAGCCTCCTGGTAACCAGCCACTGACTTaGGCAATCCAGATGTTCTTGGCAGAGGAACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PDSEPPGNQPLT*AIQMFLAEELE Trigger: CTCCAGTTCCTCTGCCAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTTACCAGGAGGCTCGGAATCAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159577.3 |
||
| CDS CAA 90 bp | AGGGGCTATGGAGGAAGCAGACAGCCTCCTTCCTGCAGACAGGCCTaGCCTGATTTCCAAGTGAGAACTGATCTTGGGACACATACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGYGGSRQPPSCRQA*PDFQVRTDLGTHTG Trigger: GCCAGTATGTGTCCCAAGATCAGTTCTCACTTGGAAATCAGGCAAGGCCTGTCTGCAGGAAGGAGGCTGTCTGCTTCCTCCATAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234220.2 |
||
| CDS TCA 72 bp | CATAGCTCCATTCCGAGCCTCCTGGTAACCAGCCACTaGCTTGGGCAATCCAGATGTTCTTGGCAGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: HSSIPSLLVTSH*LGQSRCSWQRN Trigger: GTTCCTCTGCCAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTTACCAGGAGGCTCGGAATGGAGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000089687.11 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS TCA 72 bp | TCCTTCCTGATTCCGAGCCTCCTGGTAACCAGCCACTaGCTTGGGCAATCCAGATGTTCTTGGCAGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SFLIPSLLVTSH*LGQSRCSWQRN Trigger: GTTCCTCTGCCAAGAACATCTGGATTGCCCAAGTCAGTGGCTGGTTACCAGGAGGCTCGGAATCAGGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159577.3 |
||
| CDS GCA 72 bp | GATGTACCTCGCCCTTGCCTTCCAAAAACAGGTCCCTaGTTTGCAGGCTGTGGGTTCATTGCTGTCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DVPRPCLPKTGP*FAGCGFIAVFS Trigger: GCTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS CAA 90 bp | GGATGCCTGTTTCTCCAGGTCTCTGGGCCAGACAGGAAAGATGGGTaGGCTCTACTTTCTCTCCAAACTTGGGTATCTGCACCTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GCLFLQVSGPDRKDG*ALLSLQTWVSAPLA Trigger: TGCCAGAGGTGCAGATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGTCTGGCCCAGAGACCTGGAGAAACAGGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS CCA 72 bp | TTGCCTTCCAAAAACAGGTCCCTGCTTTGCAGGCTGTaGGTTCATTGCTGTCTTCAGCGGGAAATGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPSKNRSLLCRL*VHCCLQREMVA Trigger: GGCTACCATTTCCCGCTGAAGACAGCAATGAACCCACAGCCTGCAAAGCAGGGACCTGTTTTTGGAAGGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS CCA 72 bp | GGCCTTCAAAAAGGGATGCCTGTTTCTCCAGGTCTCTaGGCCAGACAGGAAAGATGGGTTGGCTCTACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLQKGMPVSPGL*ARQERWVGSTF Trigger: GAAAGTAGAGCCAACCCATCTTTCCTGTCTGGCCCAGAGACCTGGAGAAACAGGCATCCCTTTTTGAAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS CAA 72 bp | CAGGAAAGATGGGTTGGCTCTACTTTCTCTCCAAACTaGGGTATCTGCACCTCTGGCAGGAAGGAGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QERWVGSTFSPN*GICTSGRKEWW Trigger: CCACCACTCCTTCCTGCCAGAGGTGCAGATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS CCA 72 bp | TTCTCCAGGTCTCTGGGCCAGACAGGAAAGATGGGTTaGCTCTACTTTCTCTCCAAACTTGGGTATCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FSRSLGQTGKMG*LYFLSKLGYLH Trigger: GTGCAGATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGTCTGGCCCAGAGACCTGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS CCA 72 bp | CCTGTTTCTCCAGGTCTCTGGGCCAGACAGGAAAGATaGGTTGGCTCTACTTTCTCTCCAAACTTGGGTATC | + |
|
Preference number: 6 (lower is better) Translates to: PVSPGLWARQER*VGSTFSPNLGI Trigger: GATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGTCTGGCCCAGAGACCTGGAGAAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS CAA 72 bp | GATGTTCTTGGCAGAGGAACTGGAGGTATCAGGGCTTaGGAGCTCAGAGACCTAGTCAAGACTGGAACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DVLGRGTGGIRA*ELRDLVKTGTG Trigger: TCCAGTTCCAGTCTTGACTAGGTCTCTGAGCTCCAAAGCCCTGATACCTCCAGTTCCTCTGCCAAGAACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS TCA 72 bp | CTCCTTCCTGCAGACAGGCCTTGCCTGATTTCCAAGTaGGAACTGATCTTGGGACACATACTGGCTGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLPADRPCLISK*ELILGHILAAF Trigger: AAAAGCAGCCAGTATGTGTCCCAAGATCAGTTCTCACTTGGAAATCAGGCAAGGCCTGTCTGCAGGAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234220.2 |
||
| CDS CAA 72 bp | TTTCTCCAGGTCTCTGGGCCAGACAGGAAAGATGGGTaGGCTCTACTTTCTCTCCAAACTTGGGTATCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FLQVSGPDRKDG*ALLSLQTWVSA Trigger: TGCAGATACCCAAGTTTGGAGAGAAAGTAGAGCCAACCCATCTTTCCTGTCTGGCCCAGAGACCTGGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160761.3 ENSMUST00000234615.2 |
||
| CDS CAA 90 bp | CTCATCTGGTTTCTTTGTTACCATTCTAGCAGATGTACCTCGCCCTaGCCTTCCAAAAACAGGTCCCTGCTTTGCAGGCTGTGGGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LIWFLCYHSSRCTSP*PSKNRSLLCRLWVH Trigger: ATGAACCCACAGCCTGCAAAGCAGGGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCTGCTAGAATGGTAACAAAGAAACCAGATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS GCA 72 bp | TTCTTTGTTACCATTCTAGCAGATGTACCTCGCCCTTaGCTTCCAAAAACAGGTCCCTGCTTTGCAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FFVTILADVPRP*LPKTGPCFAGC Trigger: ACAGCCTGCAAAGCAGGGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCTGCTAGAATGGTAACAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||
| CDS CAA 72 bp | TTTCTTTGTTACCATTCTAGCAGATGTACCTCGCCCTaGCCTTCCAAAAACAGGTCCCTGCTTTGCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLCYHSSRCTSP*PSKNRSLLCRL Trigger: CAGCCTGCAAAGCAGGGACCTGTTTTTGGAAGGCAAGGGCGAGGTACATCTGCTAGAATGGTAACAAAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000089687.11 ENSMUST00000159577.3 ENSMUST00000159877.3 ENSMUST00000160123.9 ENSMUST00000160761.3 ENSMUST00000162561.9 ENSMUST00000234038.2 ENSMUST00000234220.2 ENSMUST00000234615.2 ENSMUST00000235004.2 |
||