Pregenerated sensors for SH2D4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037833Ensembl transcript IDs: ENSMUST00000070328.10, ENSMUST00000096000.4
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTGAGTGCTGGCCCTACATTAAGTGGGAGGTTCGGCACTGGATTTaGTTTGGGTTATTAAAATATGACCCATTCACCCTAGGAATTCAA | + |
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Preference number: 1 (lower is better) Translates to: IECWPYIKWEVRHWI*FGLLKYDPFTLGIQ Trigger: TTGAATTCCTAGGGTGAATGGGTCATATTTTAATAACCCAAAGCAAATCCAGTGCCGAACCTCCCACTTAATGTAGGGCCAGCACTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR CCA 90 bp | AAACCCAGTGCTGCAAGGATTATAATGCCACAAAGTTTCAGAGTATaGACTATAACTGAAGCCTTCCAGACTTCAGAACCTGCCATCTTG | + |
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Preference number: 1 (lower is better) Translates to: KPSAARIIMPQSFRV*TITEAFQTSEPAIL Trigger: CAAGATGGCAGGTTCTGAAGTCTGGAAGGCTTCAGTTATAGTCCATACTCTGAAACTTTGTGGCATTATAATCCTTGCAGCACTGGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR TCA 90 bp | GAAGTAGTCAAACCAAGCAGCCAGCACAACACCAATATCCCATACTaGAAGTCAAACATAACAACCTTGAGCAATGCCCATGAGAATATC | + |
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Preference number: 1 (lower is better) Translates to: EVVKPSSQHNTNIPY*KSNITTLSNAHENI Trigger: GATATTCTCATGGGCATTGCTCAAGGTTGTTATGTTTGACTTTCAGTATGGGATATTGGTGTTGTGCTGGCTGCTTGGTTTGACTACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR TCA 90 bp | TGCAAGGATTATAATGCCACAAAGTTTCAGAGTATGGACTATAACTaGAGCCTTCCAGACTTCAGAACCTGCCATCTTGCTGCAACATCT | + |
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Preference number: 1 (lower is better) Translates to: CKDYNATKFQSMDYN*SLPDFRTCHLAATS Trigger: AGATGTTGCAGCAAGATGGCAGGTTCTGAAGTCTGGAAGGCTTCAGTTATAGTCCATACTCTGAAACTTTGTGGCATTATAATCCTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR GCA 90 bp | GCTATCTCCTTGTCTATCACCATAAGGAAACAACATGATTATGCTTaGATTAGACACTGTGGTGGTTCGAATATGGTTGGTCCATTATTA | + |
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Preference number: 1 (lower is better) Translates to: AISLSITIRKQHDYA*IRHCGGSNMVGPLL Trigger: TAATAATGGACCAACCATATTCGAACCACCACAGTGTCTAATGCAAGCATAATCATGTTGTTTCCTTATGGTGATAGACAAGGAGATAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR GCA 90 bp | GGTGTTTCCAGAGTCCATATATCCTTTTATATATGCCAAACCCAGTaGTGCAAGGATTATAATGCCACAAAGTTTCAGAGTATGGACTAT | + |
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Preference number: 1 (lower is better) Translates to: GVSRVHISFYICQTQ*CKDYNATKFQSMDY Trigger: ATAGTCCATACTCTGAAACTTTGTGGCATTATAATCCTTGCAGCACTGGGTTTGGCATATATAAAAGGATATATGGACTCTGGAAACACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR TCA 90 bp | TGTTCATCTGAAGAATGGTGGATCTTCCAAAACGTCATGAGGCTTTaGGTTTGGATATTCTTAAGCTCAGTTCAAAATCAGGATACTCAA | + |
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Preference number: 1 (lower is better) Translates to: CSSEEWWIFQNVMRL*VWIFLSSVQNQDTQ Trigger: TTGAGTATCCTGATTTTGAACTGAGCTTAAGAATATCCAAACTCAAAGCCTCATGACGTTTTGGAAGATCCACCATTCTTCAGATGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR GCA 90 bp | AAACAGTTTTCTGGTGTTTCCAGAGTCCATATATCCTTTTATATATaGCAAACCCAGTGCTGCAAGGATTATAATGCCACAAAGTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: KQFSGVSRVHISFYI*QTQCCKDYNATKFQ Trigger: CTGAAACTTTGTGGCATTATAATCCTTGCAGCACTGGGTTTGGCATATATAAAAGGATATATGGACTCTGGAAACACCAGAAAACTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGTTGCCTTCAGATCAAGGTATAGAACTCTTATCTCCTTCTCCTGAACCAAACTTAGCACAGCCATaGCAGACAGGCCTCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SQLPSDQGIELLSPSPEPNLAQP*QTGLQE Trigger: CTCCTGGAGGCCTGTCTGTCATGGCTGTGCTAAGTT...TGGTTCAGGAGAAGGAGATAAGAGTTCTATACCTTGATCTGAAGGCAACTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGAACCATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAATGGCCCTACATTAAGTaGGAGGTTCGGCACTGGATT | + |
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Preference number: 2 (lower is better) Translates to: PKNHVWQSPIVICTCEAEWPYIK*EVRHWI Trigger: AATCCAGTGCCGAACCTCCCACTTAATGTAGGGCCA...TTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATGGTTCTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR CAA 90 bp | ATGACAGACAGGCCTCCAGGAGCATCATTATTCGAGGTTTCTGTCTaGAACTTTGGAATGGGAACAGTCTCACGAATGCAGTCACGTTTT | + |
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Preference number: 2 (lower is better) Translates to: MTDRPPGASLFEVSV*NFGMGTVSRMQSRF Trigger: AAAACGTGACTGCATTCGTGAGACTGTTCCCATTCCAAAGTTCAAGACAGAAACCTCGAATAATGATGCTCCTGGAGGCCTGTCTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR GCA 90 bp | TATGGTCAATGCAGAAAGCAGAGTCGTCCACACAAAACTGGCTGTAACAATAGCCTCCTGAACCATGTCTaGTTACAAGCTGCCATGCTT | + |
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Preference number: 2 (lower is better) Translates to: YGQCRKQSRPHKTGCNNSLLNHV*LQAAML Trigger: AAGCATGGCAGCTTGTAAGCAGACATGGTTCAGGAG...GCTATTGTTACAGCCAGTTTTGTGTGGACGACTCTGCTTTCTGCATTGACCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR TCA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTGGAAGACTCCATCCTTaGGAGTTACTGAGTTACAGG | + |
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Preference number: 2 (lower is better) Translates to: HVWQSPIVICTCEAEEYGGRLHP*ELLSYR Trigger: CCTGTAACTCAGTAACTCTCAAGGATGGAGTCTTCC...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGAACCATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGTCACAAGCCTGGTCTaGTATCTCTGTGACTTTATG | + |
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Preference number: 2 (lower is better) Translates to: PKNHVWQSPIVICTCEAEVTSLV*YLCDFM Trigger: CATAAAGTCACAGAGATAGCAGACCAGGCTTGTGAC...TTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATGGTTCTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR GCA 90 bp | GTAAGGTTTCTATGGTGCTCAGAGAAAGGCTACACTCATACTCATATGGTACCACCAGACTTCAGAACCTaGCATCTTGCTGCAACATCT | + |
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Preference number: 2 (lower is better) Translates to: VRFLWCSEKGYTHTHMVPPDFRT*HLAATS Trigger: AGATGTTGCAGCAAGATGGCAGGTTCTGAAGTCTGG...TGGTACCATATGAGTATGAGTGTAGCCTTTCTCTGAGCACCATAGAAACCTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR TCA 90 bp | AATGCAGAAAGCAGAGTCGTCCACACAAAACTGGCTGTAACAATAGCCATGAGGTCTTCCAAAACGTCATaGGGCTTTGAGTTTGGATAT | + |
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Preference number: 2 (lower is better) Translates to: NAESRVVHTKLAVTIAMRSSKTS*GFEFGY Trigger: ATATCCAAACTCAAAGCCTCATGACGTTTTGGAAGA...CCTCATGGCTATTGTTACAGCCAGTTTTGTGTGGACGACTCTGCTTTCTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR TCA 90 bp | ATGATCCCAAAGAACCATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGCTTATCTCCTTCTCCTaGACCATGTCTGCTTACAAG | + |
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Preference number: 2 (lower is better) Translates to: MIPKNHVWQSPIVICTCELISFS*TMSAYK Trigger: CTTGTAAGCAGACATGGTTCAGGAGAAGGAGATAAG...CTCACATGTACATATGACAATGGGACTTTGCCACACATGGTTCTTTGGGATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTTGGGAGGTTCGGCACTaGATTTGCTTTGGGTTATTA | + |
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Preference number: 2 (lower is better) Translates to: HVWQSPIVICTCEAEEYGWEVRH*ICFGLL Trigger: TAATAACCCAAAGCAAATCCAGTGCCGAACCTCCCA...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CCA 90 bp | AATGCAGAAAGCAGAGTCGTCCACACAAAACTGGCTGTAACAATAGCCATGAGGAGCCAAGAGGTTGAGTaGAGAATAAAGACACCTTAT | + |
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Preference number: 2 (lower is better) Translates to: NAESRVVHTKLAVTIAMRSQEVE*RIKTPY Trigger: ATAAGGTGTCTTTATTCTCCACTCAACCTCTTGGCT...CCTCATGGCTATTGTTACAGCCAGTTTTGTGTGGACGACTCTGCTTTCTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR CAA 90 bp | CCAGACTTCAGAACCTGCCATCTTGCTGCAACATCTGCTATCTCCTaGTCTATCACCATAAGGAAACAACATGATTATGCTTGCATTAGA | + |
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Preference number: 2 (lower is better) Translates to: PDFRTCHLAATSAIS*SITIRKQHDYACIR Trigger: TCTAATGCAAGCATAATCATGTTGTTTCCTTATGGTGATAGACAAGGAGATAGCAGATGTTGCAGCAAGATGGCAGGTTCTGAAGTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR TCA 90 bp | TATGGTCAATGCAGAAAGCAGAGTCGTCCACACAAAACTGGCTGTAACAATAGCCTTGAGCAATGCCCATaGGAATATCAACAAGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: YGQCRKQSRPHKTGCNNSLEQCP*EYQQVH Trigger: ATGAACTTGTTGATATTCTCATGGGCATTGCTCAAG...GCTATTGTTACAGCCAGTTTTGTGTGGACGACTCTGCTTTCTGCATTGACCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR TCA 90 bp | TATGGTCAATGCAGAAAGCAGAGTCGTCCACACAAAACTGGCTGTAACAATAGCATAATGACAATTGACTaGACCTCTGAAGCCATAAGC | + |
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Preference number: 2 (lower is better) Translates to: YGQCRKQSRPHKTGCNNSIMTID*TSEAIS Trigger: GCTTATGGCTTCAGAGGTTCAGTCAATTGTCATTAT...GCTATTGTTACAGCCAGTTTTGTGTGGACGACTCTGCTTTCTGCATTGACCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR GCA 90 bp | ATGATCCCAAAGAACCATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGTGTCTGCTTACAAGCTaGCATGCTTCCCATCATAAT | + |
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Preference number: 2 (lower is better) Translates to: MIPKNHVWQSPIVICTCECLLTS*HASHHN Trigger: ATTATGATGGGAAGCATGGCAGCTTGTAAGCAGACA...CTCACATGTACATATGACAATGGGACTTTGCCACACATGGTTCTTTGGGATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGTTGCCTTCAGATCAAGGTATAGAACTCTTATCTCCTTCTCCTGAACCATTCATGGTGTCTCTTTaGAACAATAAAACCCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: SQLPSDQGIELLSPSPEPFMVSL*NNKTLR Trigger: CCTTAGGGTTTTATTGTTGCAAAGAGACACCATGAA...TGGTTCAGGAGAAGGAGATAAGAGTTCTATACCTTGATCTGAAGGCAACTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTTCATCTGAAGAATGGTaGATCTTCCAAAACGTCATG | + |
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Preference number: 2 (lower is better) Translates to: HVWQSPIVICTCEAEEYGSSEEW*IFQNVM Trigger: CATGACGTTTTGGAAGATCCACCATTCTTCAGATGA...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTCCATGTAAGTTAGTCACAAGCCTGGTCTGCTATCTCTGTGACTTTATGTGTTCATCTGAAGAATaGTGGATCTTCCAAAACGTC | + |
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Preference number: 2 (lower is better) Translates to: CLPCKLVTSLVCYLCDFMCSSEE*WIFQNV Trigger: GACGTTTTGGAAGATCCACCATTCTTCAGATGAACA...CATAAAGTCACAGAGATAGCAGACCAGGCTTGTGACTAACTTACATGGAAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAAGGATTATAATGCCACAAAGTTTCAGAGTATGGACTATAACTGAAGCCTTCTGTCTTGAACTTTaGAATGGGAACAGTCTCACG | + |
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Preference number: 2 (lower is better) Translates to: AARIIMPQSFRVWTITEAFCLEL*NGNSLT Trigger: CGTGAGACTGTTCCCATTCCAAAGTTCAAGACAGAA...GGCTTCAGTTATAGTCCATACTCTGAAACTTTGTGGCATTATAATCCTTGCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR TCA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTGGTCTGCTATCTCTGTaGCTTTATGAAGTAATATAC | + |
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Preference number: 2 (lower is better) Translates to: HVWQSPIVICTCEAEEYGGLLSL*LYEVIY Trigger: GTATATTACTTCATAAAGTCACAGAGATAGCAGACC...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR TCA 90 bp | ATGATCCCAAAGAACCATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGTTCTGCGCATTTACATaGCATCATTACCTCAATTTG | + |
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Preference number: 2 (lower is better) Translates to: MIPKNHVWQSPIVICTCEFCAFT*HHYLNL Trigger: CAAATTGAGGTAATGATGTCATGTAAATGCGCAGAA...CTCACATGTACATATGACAATGGGACTTTGCCACACATGGTTCTTTGGGATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR GCA 90 bp | TATGGTCAATGCAGAAAGCAGAGTCGTCCACACAAAACTGGCTGTAACAATAGCGTTCGGCACTGGATTTaGTTTGGGTTATTAAAATAT | + |
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Preference number: 2 (lower is better) Translates to: YGQCRKQSRPHKTGCNNSVRHWI*FGLLKY Trigger: ATATTTTAATAACCCAAAGCAAATCCAGTGCCGAAC...GCTATTGTTACAGCCAGTTTTGTGTGGACGACTCTGCTTTCTGCATTGACCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR GCA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTATATCCTTTTATATATaGCAAACCCAGTGCTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: HVWQSPIVICTCEAEEYGISFYI*QTQCCK Trigger: CTTGCAGCACTGGGTTTGGCATATATAAAAGGATAT...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTTGGTTCGAATATGGTTaGTCCATTATTAGGAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: HVWQSPIVICTCEAEEYGWFEYG*SIIRRY Trigger: ATACCTCCTAATAATGGACCAACCATATTCGAACCA...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CCA 90 bp | ATGATCCCAAAGAACCATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGCAAAGTTTCAGAGTATaGACTATAACTGAAGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: MIPKNHVWQSPIVICTCEQSFRV*TITEAF Trigger: GAAGGCTTCAGTTATAGTCCATACTCTGAAACTTTG...CTCACATGTACATATGACAATGGGACTTTGCCACACATGGTTCTTTGGGATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGAACCATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGATAAAACAGTTTTCTaGTGTTTCCAGAGTCCATAT | + |
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Preference number: 2 (lower is better) Translates to: PKNHVWQSPIVICTCEAEDKTVF*CFQSPY Trigger: ATATGGACTCTGGAAACACCAGAAAACTGTTTTATC...TTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATGGTTCTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR GCA 90 bp | GCTGCAAGGATTATAATGCCACAAAGTTTCAGAGTATGGACTATAACTGAAGCCATCATTACCTCAATTTaGAAAACCAGAGCCACATGT | + |
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Preference number: 2 (lower is better) Translates to: AARIIMPQSFRVWTITEAIITSI*KTRATC Trigger: ACATGTGGCTCTGGTTTTGCAAATTGAGGTAATGAT...GGCTTCAGTTATAGTCCATACTCTGAAACTTTGTGGCATTATAATCCTTGCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTTCTAAACACTATCCTTaGGTTTATAATCCATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: HVWQSPIVICTCEAEEYGSKHYP*VYNPFQ Trigger: CTGGAATGGATTATAAACCCAAGGATAGTGTTTAGA...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CCA 90 bp | ATGATCCCAAAGAACCATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGATTTTATTTTATGAGTaGCTGTGTTCATGGTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: MIPKNHVWQSPIVICTCEILFYE*LCSWCL Trigger: GAGACACCATGAACACAGCCACTCATAAAATAAAAT...CTCACATGTACATATGACAATGGGACTTTGCCACACATGGTTCTTTGGGATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR GCA 72 bp | CTGAAGCCTTCCAGACTTCAGAACCTGCCATCTTGCTaGAACATCTGCTATCTCCTTGTCTATCACCATAAG | + |
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Preference number: 3 (lower is better) Translates to: LKPSRLQNLPSC*NICYLLVYHHK Trigger: CTTATGGTGATAGACAAGGAGATAGCAGATGTTGCAGCAAGATGGCAGGTTCTGAAGTCTGGAAGGCTTCAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR CCA 72 bp | GAGTGCTGGCCCTACATTAAGTGGGAGGTTCGGCACTaGATTTGCTTTGGGTTATTAAAATATGACCCATTC | + |
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Preference number: 3 (lower is better) Translates to: ECWPYIKWEVRH*ICFGLLKYDPF Trigger: GAATGGGTCATATTTTAATAACCCAAAGCAAATCCAGTGCCGAACCTCCCACTTAATGTAGGGCCAGCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGTTGCCTTCAGATCAAGGTATAGAACTCTTATCTCCTTCTCCTGAACCAAGGAAGACTCCATCCTaGAGAGTTACTGAGTTACAG | + |
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Preference number: 3 (lower is better) Translates to: SQLPSDQGIELLSPSPEPRKTPS*RVTELQ Trigger: CTGTAACTCAGTAACTCTCAAGGATGGAGTCTTCCT...TGGTTCAGGAGAAGGAGATAAGAGTTCTATACCTTGATCTGAAGGCAACTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CAA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTCAGTCTCTCTCCCAGTaGCCTTCAGATCAAGGTATA | + |
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Preference number: 3 (lower is better) Translates to: HVWQSPIVICTCEAEEYGQSLSQ*PSDQGI Trigger: TATACCTTGATCTGAAGGCAACTGGGAGAGAGACTG...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR-3UTR CAA 90 bp | GTAAGGTTTCTATGGTGCTCAGAGAAAGGCTACACTCATACTCATATGGTACCATCAGAACCTGCCATCTaGCTGCAACATCTGCTATCT | + |
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Preference number: 3 (lower is better) Translates to: VRFLWCSEKGYTHTHMVPSEPAI*LQHLLS Trigger: AGATAGCAGATGTTGCAGCAAGATGGCAGGTTCTGA...TGGTACCATATGAGTATGAGTGTAGCCTTTCTCTGAGCACCATAGAAACCTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR TCA 72 bp | TTCAGATCAAGGTATAGAACTCTTATCTCCTTCTCCTaGACCATGTCTGCTTACAAGCTGCCATGCTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: FRSRYRTLISFS*TMSAYKLPCFP Trigger: TGGGAAGCATGGCAGCTTGTAAGCAGACATGGTTCAGGAGAAGGAGATAAGAGTTCTATACCTTGATCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR GCA 72 bp | TGGCCCTACATTAAGTGGGAGGTTCGGCACTGGATTTaGTTTGGGTTATTAAAATATGACCCATTCACCCTA | + |
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Preference number: 3 (lower is better) Translates to: WPYIKWEVRHWI*FGLLKYDPFTL Trigger: TAGGGTGAATGGGTCATATTTTAATAACCCAAAGCAAATCCAGTGCCGAACCTCCCACTTAATGTAGGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR GCA 72 bp | TCCAGACTTCAGAACCTGCCATCTTGCTGCAACATCTaGTATCTCCTTGTCTATCACCATAAGGAAACAACA | + |
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Preference number: 3 (lower is better) Translates to: SRLQNLPSCCNI*YLLVYHHKETT Trigger: TGTTGTTTCCTTATGGTGATAGACAAGGAGATAGCAGATGTTGCAGCAAGATGGCAGGTTCTGAAGTCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR GCA 72 bp | GTCATATGTACATGTGAGGCAGAAGAATATGGTCAATaGAGAAAGCAGAGTCGTCCACACAAAACTGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: VICTCEAEEYGQ*RKQSRPHKTGC Trigger: ACAGCCAGTTTTGTGTGGACGACTCTGCTTTCTGCATTGACCATATTCTTCTGCCTCACATGTACATATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| 3UTR CCA 72 bp | CAACAAAGACTTATTGAGTGCTGGCCCTACATTAAGTaGGAGGTTCGGCACTGGATTTGCTTTGGGTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: QQRLIECWPYIK*EVRHWICFGLL Trigger: TAATAACCCAAAGCAAATCCAGTGCCGAACCTCCCACTTAATGTAGGGCCAGCACTCAATAAGTCTTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAGTTGCCTTCAGATCAAGGTATAGAACTCTTATCTCCTTCTCCTGAACCATTCGAGGTTTCTGTCTaGAACTTTGGAATGGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: SQLPSDQGIELLSPSPEPFEVSV*NFGMGT Trigger: TGTTCCCATTCCAAAGTTCAAGACAGAAACCTCGAA...TGGTTCAGGAGAAGGAGATAAGAGTTCTATACCTTGATCTGAAGGCAACTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGGTTTCTATGGTGCTCAGAGAAAGGCTACACTCATACTCATATGGTACCATGTGGCAAAGTCCCATaGTCATATGTACATGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VRFLWCSEKGYTHTHMVPCGKVP*SYVHVR Trigger: CCTCACATGTACATATGACAATGGGACTTTGCCACA...TGGTACCATATGAGTATGAGTGTAGCCTTTCTCTGAGCACCATAGAAACCTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR TCA 72 bp | AAACCAAGCAGCCAGCACAACACCAATATCCCATACTaGAAGTCAAACATAACAACCTTGAGCAATGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: KPSSQHNTNIPY*KSNITTLSNAH Trigger: ATGGGCATTGCTCAAGGTTGTTATGTTTGACTTTCAGTATGGGATATTGGTGTTGTGCTGGCTGCTTGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR CCA 72 bp | AGGAGCATCATTATTCGAGGTTTCTGTCTTGAACTTTaGAATGGGAACAGTCTCACGAATGCAGTCACGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RSIIIRGFCLEL*NGNSLTNAVTF Trigger: AAACGTGACTGCATTCGTGAGACTGTTCCCATTCCAAAGTTCAAGACAGAAACCTCGAATAATGATGCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR CCA 72 bp | GCTGCAAGGATTATAATGCCACAAAGTTTCAGAGTATaGACTATAACTGAAGCCTTCCAGACTTCAGAACCT | + |
|
Preference number: 3 (lower is better) Translates to: AARIIMPQSFRV*TITEAFQTSEP Trigger: AGGTTCTGAAGTCTGGAAGGCTTCAGTTATAGTCCATACTCTGAAACTTTGTGGCATTATAATCCTTGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTTCCATGTAAGTTAGTCACAAGCCTGGTCTGCTATCTCTGTGACTTTATGCATGAGGCTTTGAGTTaGGATATTCTTAAGCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: CLPCKLVTSLVCYLCDFMHEALS*DILKLS Trigger: ACTGAGCTTAAGAATATCCAAACTCAAAGCCTCATG...CATAAAGTCACAGAGATAGCAGACCAGGCTTGTGACTAACTTACATGGAAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR-3UTR CAA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTGGTTCGGCACTGGATTaGCTTTGGGTTATTAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: HVWQSPIVICTCEAEEYGGSALD*LWVIKI Trigger: TATTTTAATAACCCAAAGCAAATCCAGTGCCGAACC...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR GCA 72 bp | TCTGGTGTTTCCAGAGTCCATATATCCTTTTATATATaGCAAACCCAGTGCTGCAAGGATTATAATGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SGVSRVHISFYI*QTQCCKDYNAT Trigger: TGTGGCATTATAATCCTTGCAGCACTGGGTTTGGCATATATAAAAGGATATATGGACTCTGGAAACACCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR TCA 72 bp | GAAGAATGGTGGATCTTCCAAAACGTCATGAGGCTTTaGGTTTGGATATTCTTAAGCTCAGTTCAAAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: EEWWIFQNVMRL*VWIFLSSVQNQ Trigger: CTGATTTTGAACTGAGCTTAAGAATATCCAAACTCAAAGCCTCATGACGTTTTGGAAGATCCACCATTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR GCA 72 bp | TTGTCTATCACCATAAGGAAACAACATGATTATGCTTaGATTAGACACTGTGGTGGTTCGAATATGGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSITIRKQHDYA*IRHCGGSNMVG Trigger: ACCAACCATATTCGAACCACCACAGTGTCTAATGCAAGCATAATCATGTTGTTTCCTTATGGTGATAGACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR GCA 72 bp | TATTCTGCGCATTTACATGACATCATTACCTCAATTTaGAAAACCAGAGCCACATGTAAGATGAGACATAAG | + |
|
Preference number: 3 (lower is better) Translates to: YSAHLHDIITSI*KTRATCKMRHK Trigger: CTTATGTCTCATCTTACATGTGGCTCTGGTTTTGCAAATTGAGGTAATGATGTCATGTAAATGCGCAGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR GCA 72 bp | GTCCATATATCCTTTTATATATGCCAAACCCAGTGCTaGAAGGATTATAATGCCACAAAGTTTCAGAGTATG | + |
|
Preference number: 3 (lower is better) Translates to: VHISFYICQTQC*KDYNATKFQSM Trigger: CATACTCTGAAACTTTGTGGCATTATAATCCTTGCAGCACTGGGTTTGGCATATATAAAAGGATATATGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR TCA 90 bp | TATGGTCAATGCAGAAAGCAGAGTCGTCCACACAAAACTGGCTGTAACAATAGCAGGTCCTGTGAGGGGTaGTGGTGGACTGGTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YGQCRKQSRPHKTGCNNSRSCEG*WWTGVR Trigger: CCTGACACCAGTCCACCATCACCCCTCACAGGACCT...GCTATTGTTACAGCCAGTTTTGTGTGGACGACTCTGCTTTCTGCATTGACCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR TCA 90 bp | GCTGCAAGGATTATAATGCCACAAAGTTTCAGAGTATGGACTATAACTGAAGCCTCCTGTCAGGTCCTGTaGGGGGTGATGGTGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: AARIIMPQSFRVWTITEASCQVL*GVMVDW Trigger: CCAGTCCACCATCACCCCTCACAGGACCTGACAGGA...GGCTTCAGTTATAGTCCATACTCTGAAACTTTGTGGCATTATAATCCTTGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTTGCCTTCAGATCAAGGTATAGAACTCTTATCTCCTTCTCCTGAACCACCACAAGGAAGTGTTTaGAGCCTCTCTGCAGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQLPSDQGIELLSPSPEPPQGSV*SLSAGG Trigger: ACCGCCTGCAGAGAGGCTTCAAACACTTCCTTGTGG...TGGTTCAGGAGAAGGAGATAAGAGTTCTATACCTTGATCTGAAGGCAACTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR GCA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTGTTCCTCTCAAAGCCTaGTCGGCGAGGCAGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HVWQSPIVICTCEAEEYGVPLKA*SARQLF Trigger: GAACAGCTGCCTCGCCGAGCAGGCTTTGAGAGGAAC...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCCATGTAAGTTAGTCACAAGCCTGGTCTGCTATCTCTGTGACTTTATGCTTGCCTCTTGCTCGTaGTTCTGGCCAAGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPCKLVTSLVCYLCDFMLASCS*FWPSSW Trigger: CCAAGAGCTTGGCCAGAACCACGAGCAAGAGGCAAG...CATAAAGTCACAGAGATAGCAGACCAGGCTTGTGACTAACTTACATGGAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR CCA 90 bp | TGTCTTCCATGTAAGTTAGTCACAAGCCTGGTCTGCTATCTCTGTGACTTTATGTCTGTTAGGGTGGCATaGCGATTAGGGTCCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLPCKLVTSLVCYLCDFMSVRVA*RLGSTP Trigger: GGGAGTGGACCCTAATCGCCATGCCACCCTAACAGA...CATAAAGTCACAGAGATAGCAGACCAGGCTTGTGACTAACTTACATGGAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTTGCCTTCAGATCAAGGTATAGAACTCTTATCTCCTTCTCCTGAACCACAGGTGATAGTCTGGTaGGCTATCCCTCTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SQLPSDQGIELLSPSPEPQVIVW*AIPLST Trigger: TGTGGACAGAGGGATAGCCCACCAGACTATCACCTG...TGGTTCAGGAGAAGGAGATAAGAGTTCTATACCTTGATCTGAAGGCAACTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTTGCCTTCAGATCAAGGTATAGAACTCTTATCTCCTTCTCCTGAACCACAACAGGTGATAGTCTaGTGGGCTATCCCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQLPSDQGIELLSPSPEPQQVIV*WAIPLS Trigger: GGACAGAGGGATAGCCCACCAGACTATCACCTGTTG...TGGTTCAGGAGAAGGAGATAAGAGTTCTATACCTTGATCTGAAGGCAACTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR GCA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTGACCCGGACCAGAAATaGTCCCTCGGTCATATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HVWQSPIVICTCEAEEYGDPDQK*SLGHIL Trigger: GAGAATATGACCGAGGGAGCATTTCTGGTCCGGGTC...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR CAA 72 bp | AGGCCTCCAGGAGCATCATTATTCGAGGTTTCTGTCTaGAACTTTGGAATGGGAACAGTCTCACGAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPPGASLFEVSV*NFGMGTVSRMQ Trigger: CTGCATTCGTGAGACTGTTCCCATTCCAAAGTTCAAGACAGAAACCTCGAATAATGATGCTCCTGGAGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR CCA 90 bp | GCTGCAAGGATTATAATGCCACAAAGTTTCAGAGTATGGACTATAACTGAAGCCAAGGGGCGATGGACTTaGTGTTCCTCTCAAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AARIIMPQSFRVWTITEAKGRWT*CSSQSL Trigger: CAGGCTTTGAGAGGAACACCAAGTCCATCGCCCCTT...GGCTTCAGTTATAGTCCATACTCTGAAACTTTGTGGCATTATAATCCTTGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR CCA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTGAAACCAAGGGGCGATaGACTTGGTGTTCCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HVWQSPIVICTCEAEEYGETKGR*TWCSSQ Trigger: TTGAGAGGAACACCAAGTCCATCGCCCCTTGGTTTC...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR TCA 90 bp | ACAGTCTCTCTCCCAGTTGCCTTCAGATCAAGGTATAGAACTCTTATCTCCTTCCCTTGTGGAAATCAATaGGATCTGTTAGGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVSLPVAFRSRYRTLISFPCGNQ*DLLGWH Trigger: ATGCCACCCTAACAGATCTCATTGATTTCCACAAGG...GAAGGAGATAAGAGTTCTATACCTTGATCTGAAGGCAACTGGGAGAGAGACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS-3UTR GCA 90 bp | TCCCAGTTGCCTTCAGATCAAGGTATAGAACTCTTATCTCCTTCTCCTGAACCATTGGTGATAAAGTCTTaGCTCTTGCTCGTGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLPSDQGIELLSPSPEPLVIKS*LLLVVL Trigger: CAGAACCACGAGCAAGAGGCAAGACTTTATCACCAA...TGGTTCAGGAGAAGGAGATAAGAGTTCTATACCTTGATCTGAAGGCAACTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR CAA 72 bp | CTTTGCAACAATAAAACCCTAAGGAAGACTCCATCCTaGAGAGTTACTGAGTTACAGGGAGGTTACTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCNNKTLRKTPS*RVTELQGGYSH Trigger: ATGAGAGTAACCTCCCTGTAACTCAGTAACTCTCAAGGATGGAGTCTTCCTTAGGGTTTTATTGTTGCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR CAA 72 bp | AGAACCTGCCATCTTGCTGCAACATCTGCTATCTCCTaGTCTATCACCATAAGGAAACAACATGATTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTCHLAATSAIS*SITIRKQHDYA Trigger: AGCATAATCATGTTGTTTCCTTATGGTGATAGACAAGGAGATAGCAGATGTTGCAGCAAGATGGCAGGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| 3UTR CAA 72 bp | ATGGTGGATCTTCCAAAACGTCATGAGGCTTTGAGTTaGGATATTCTTAAGCTCAGTTCAAAATCAGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: MVDLPKRHEALS*DILKLSSKSGY Trigger: GTATCCTGATTTTGAACTGAGCTTAAGAATATCCAAACTCAAAGCCTCATGACGTTTTGGAAGATCCACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
||
| CDS TCA 90 bp | TTGTTGCTCGCTCTCTTGACCTTTGCGGGCCTCAGGCCCTCTGCCTaGGCCAGGGCATCCCACGCCTCCCGTTCCCTCCATCGCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLALLTFAGLRPSA*ARASHASRSLHRRS Trigger: GCTGCGGCGATGGAGGGAACGGGAGGCGTGGGATGCCCTGGCTCAGGCAGAGGGCCTGAGGCCCGCAAAGGTCAAGAGAGCGAGCAACAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
||
| CDS TCA 90 bp | TGGATGGCTCGGAGTGAATGGCGCCGGTACTCATCCCGGGCTCGCTaGGCACGACGGCTCCTCTCTTCATCAGCAGCCTTGGATCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: WMARSEWRRYSSRAR*ARRLLSSSAALDLR Trigger: GCGGAGATCCAAGGCTGCTGATGAAGAGAGGAGCCGTCGTGCTCAGCGAGCCCGGGATGAGTACCGGCGCCATTCACTCCGAGCCATCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
||
| CDS GCA 90 bp | TCCCAGAAGCCACTGGAGATGCTTGTTGCTCGCTCTCTTGACCTTTaGGGGCCTCAGGCCCTCTGCCTGAGCCAGGGCATCCCACGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQKPLEMLVARSLDL*GPQALCLSQGIPRL Trigger: GAGGCGTGGGATGCCCTGGCTCAGGCAGAGGGCCTGAGGCCCGCAAAGGTCAAGAGAGCGAGCAACAAGCATCTCCAGTGGCTTCTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
||
| CDS CCA 90 bp | CAGCTGTTCCTCCTTGAACCAGCGCACGATGACTTCTCTGGAGAGTaGACGCAGAGGTCGCTCCCAGGTCCTGTCAGGTCCTGTGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLFLLEPAHDDFSGE*TQRSLPGPVRSCEG Trigger: CCCCTCACAGGACCTGACAGGACCTGGGAGCGACCTCTGCGTCCACTCTCCAGAGAAGTCATCGTGCGCTGGTTCAAGGAGGAACAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
||
| CDS CCA 90 bp | GCTCTTGGAACATGGTGCTTAGGCCAGCAACAGTGCCCTTCTGGATaGCTCGGAGTGAATGGCGCCGGTACTCATCCCGGGCTCGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALGTWCLGQQQCPSG*LGVNGAGTHPGLAE Trigger: CTCAGCGAGCCCGGGATGAGTACCGGCGCCATTCACTCCGAGCCATCCAGAAGGGCACTGTTGCTGGCCTAAGCACCATGTTCCAAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
||
| CDS GCA 90 bp | GTCTCCAGGGCCTTCGCCCATGACCCACACCCAGACCTCACCATCTaGTCCCAGAAGCCACTGGAGATGCTTGTTGCTCGCTCTCTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VSRAFAHDPHPDLTI*SQKPLEMLVARSLD Trigger: GTCAAGAGAGCGAGCAACAAGCATCTCCAGTGGCTTCTGGGAGCAGATGGTGAGGTCTGGGTGTGGGTCATGGGCGAAGGCCCTGGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
||
| CDS GCA 90 bp | TTGGCTGTGCAGCTGGGCCTGCTTCAGAGTCCAGTAGAGTTCCTTTaGCCTCTGCTCCTCTTGGAGCCGAATCTGTTCTTCCCCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LAVQLGLLQSPVEFL*PLLLLEPNLFFPSP Trigger: CGGCGAGGGGAAGAACAGATTCGGCTCCAAGAGGAGCAGAGGGCAAAGGAACTCTACTGGACTCTGAAGCAGGCCCAGCTGCACAGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
||
| CDS GCA 90 bp | GGTTCTGGCCAAGCTCTTGGAACATGGTGCTTAGGCCAGCAACAGTaGCCTTCTGGATGGCTCGGAGTGAATGGCGCCGGTACTCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSGQALGTWCLGQQQ*PSGWLGVNGAGTHP Trigger: GGGATGAGTACCGGCGCCATTCACTCCGAGCCATCCAGAAGGGCACTGTTGCTGGCCTAAGCACCATGTTCCAAGAGCTTGGCCAGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
||
| CDS TCA 90 bp | TGGAGAGTGGACGCAGAGGTCGCTCCCAGGTCCTGTCAGGTCCTGTaGGGGGTGATGGTGGACTGGTGTCAGGAAGTTGGTGATAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WRVDAEVAPRSCQVL*GVMVDWCQEVGDKV Trigger: GACTTTATCACCAACTTCCTGACACCAGTCCACCATCACCCCTCACAGGACCTGACAGGACCTGGGAGCGACCTCTGCGTCCACTCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
||
| CDS GCA 90 bp | TCCATGAAACCAAGGGGCGATGGACTTGGTGTTCCTCTCAAAGCCTaGTCGGCGAGGCAGCTGTTCCTCCTTGAACCAGCGCACGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SMKPRGDGLGVPLKA*SARQLFLLEPAHDD Trigger: GTCATCGTGCGCTGGTTCAAGGAGGAACAGCTGCCTCGCCGAGCAGGCTTTGAGAGGAACACCAAGTCCATCGCCCCTTGGTTTCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
||
| CDS TCA 90 bp | GCTCCTCTCGCATCTTATAGAAGAGGATGTGCTTCTGCACATCGCTaGGCTCGGCCAACAGCTCCGGGTCGATGTACATGTCCTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: APLASYRRGCASAHR*ARPTAPGRCTCPAG Trigger: TCCTGCAGGACATGTACATCGACCCGGAGCTGTTGGCCGAGCTCAGCGATGTGCAGAAGCACATCCTCTTCTATAAGATGCGAGAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
||
| CDS GCA 90 bp | GTCTTGCCTCTTGCTCGTGGTTCTGGCCAAGCTCTTGGAACATGGTaGTTAGGCCAGCAACAGTGCCCTTCTGGATGGCTCGGAGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VLPLARGSGQALGTW*LGQQQCPSGWLGVN Trigger: ATTCACTCCGAGCCATCCAGAAGGGCACTGTTGCTGGCCTAAGCACCATGTTCCAAGAGCTTGGCCAGAACCACGAGCAAGAGGCAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
||
| CDS CCA 90 bp | TGGATCTCCGCAGCTGTTCTTCCCATTCACGCTCCTCATTCTCACTaGCTTGGCTGTGCAGCTGGGCCTGCTTCAGAGTCCAGTAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: WISAAVLPIHAPHSH*LGCAAGPASESSRV Trigger: AACTCTACTGGACTCTGAAGCAGGCCCAGCTGCACAGCCAAGCCAGTGAGAATGAGGAGCGTGAATGGGAAGAACAGCTGCGGAGATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
||
| CDS CCA 90 bp | AAAGTCTTGCCTCTTGCTCGTGGTTCTGGCCAAGCTCTTGGAACATaGTGCTTAGGCCAGCAACAGTGCCCTTCTGGATGGCTCGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVLPLARGSGQALGT*CLGQQQCPSGWLGV Trigger: CACTCCGAGCCATCCAGAAGGGCACTGTTGCTGGCCTAAGCACCATGTTCCAAGAGCTTGGCCAGAACCACGAGCAAGAGGCAAGACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
||
| CDS TCA 90 bp | CTCTCTGCAGGCGGTAGGACAGGGTATAACCCCAGATCTTCTCACTaGCCCGGACCAGAAATGCTCCCTCGGTCATATTCTCCAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSAGGRTGYNPRSSH*PGPEMLPRSYSPEG Trigger: ACCTTCTGGAGAATATGACCGAGGGAGCATTTCTGGTCCGGGTCAGTGAGAAGATCTGGGGTTATACCCTGTCCTACCGCCTGCAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
||
| CDS GCA 90 bp | GGACAGGGTATAACCCCAGATCTTCTCACTGACCCGGACCAGAAATaGTCCCTCGGTCATATTCTCCAGAAGGTCTTCTGCACTCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GQGITPDLLTDPDQK*SLGHILQKVFCTLS Trigger: CGAGAGAGTGCAGAAGACCTTCTGGAGAATATGACCGAGGGAGCATTTCTGGTCCGGGTCAGTGAGAAGATCTGGGGTTATACCCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
||
| CDS TCA 90 bp | CCAGAAAGCTGTAGAAGTCCCCAGAAGCATCCACAAGGAAGTGTTTaGAGCCTCTCTGCAGGCGGTAGGACAGGGTATAACCCCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: PESCRSPQKHPQGSV*SLSAGGRTGYNPRS Trigger: AGATCTGGGGTTATACCCTGTCCTACCGCCTGCAGAGAGGCTTCAAACACTTCCTTGTGGATGCTTCTGGGGACTTCTACAGCTTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
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| CDS GCA 90 bp | CCGGACCAGAAATGCTCCCTCGGTCATATTCTCCAGAAGGTCTTCTaGACTCTCTCGGCTAATAATTCCATGAAACCAAGGGGCGATGGA | + |
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Preference number: 5 (lower is better) Translates to: PDQKCSLGHILQKVF*TLSANNSMKPRGDG Trigger: TCCATCGCCCCTTGGTTTCATGGAATTATTAGCCGAGAGAGTGCAGAAGACCTTCTGGAGAATATGACCGAGGGAGCATTTCTGGTCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
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| CDS-3UTR CAA 90 bp | TCCCAGTTGCCTTCAGATCAAGGTATAGAACTCTTATCTCCTTCTCCTGAACCATCCACAAGGAAGTGTTaGAAGCCTCTCTGCAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: SQLPSDQGIELLSPSPEPSTRKC*KPLCRR Trigger: CCGCCTGCAGAGAGGCTTCAAACACTTCCTTGTGGA...TGGTTCAGGAGAAGGAGATAAGAGTTCTATACCTTGATCTGAAGGCAACTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| CDS-3UTR CAA 90 bp | CATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGCAGAAGAATATGGTCAAGGGGCGATGGACTaGGTGTTCCTCTCAAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: HVWQSPIVICTCEAEEYGQGAMD*VFLSKP Trigger: AGGCTTTGAGAGGAACACCAAGTCCATCGCCCCTTG...ACCATATTCTTCTGCCTCACATGTACATATGACAATGGGACTTTGCCACACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| CDS-3UTR CAA 90 bp | ATGATCCCAAAGAACCATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGATAAAGTCTTGCCTCTaGCTCGTGGTTCTGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: MIPKNHVWQSPIVICTCEIKSCL*LVVLAK Trigger: CTTGGCCAGAACCACGAGCAAGAGGCAAGACTTTAT...CTCACATGTACATATGACAATGGGACTTTGCCACACATGGTTCTTTGGGATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| CDS-3UTR CAA 90 bp | ATGATCCCAAAGAACCATGTGTGGCAAAGTCCCATTGTCATATGTACATGTGAGGTGATGATCTCCTCCTaGTGGAAATCAATGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: MIPKNHVWQSPIVICTCEVMISS*WKSMRS Trigger: AGATCTCATTGATTTCCACAAGGAGGAGATCATCAC...CTCACATGTACATATGACAATGGGACTTTGCCACACATGGTTCTTTGGGATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070328.10 |
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| CDS TCA 72 bp | CGGAGTGAATGGCGCCGGTACTCATCCCGGGCTCGCTaGGCACGACGGCTCCTCTCTTCATCAGCAGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RSEWRRYSSRAR*ARRLLSSSAAL Trigger: CAAGGCTGCTGATGAAGAGAGGAGCCGTCGTGCTCAGCGAGCCCGGGATGAGTACCGGCGCCATTCACTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS TCA 72 bp | CCAGAAGCCACTGGAGATGCTTGTTGCTCGCTCTCTTaGCCTTTGCGGGCCTCAGGCCCTCTGCCTGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PEATGDACCSLS*PLRASGPLPEP Trigger: TGGCTCAGGCAGAGGGCCTGAGGCCCGCAAAGGTCAAGAGAGCGAGCAACAAGCATCTCCAGTGGCTTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS GCA 72 bp | CCAAGGGGCGATGGACTTGGTGTTCCTCTCAAAGCCTaGTCGGCGAGGCAGCTGTTCCTCCTTGAACCAGCG | + |
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Preference number: 6 (lower is better) Translates to: PRGDGLGVPLKA*SARQLFLLEPA Trigger: CGCTGGTTCAAGGAGGAACAGCTGCCTCGCCGAGCAGGCTTTGAGAGGAACACCAAGTCCATCGCCCCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
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| CDS GCA 72 bp | GCCTTCGCCCATGACCCACACCCAGACCTCACCATCTaGTCCCAGAAGCCACTGGAGATGCTTGTTGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: AFAHDPHPDLTI*SQKPLEMLVAR Trigger: GCGAGCAACAAGCATCTCCAGTGGCTTCTGGGAGCAGATGGTGAGGTCTGGGTGTGGGTCATGGGCGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS CCA 72 bp | CTCCTTGAACCAGCGCACGATGACTTCTCTGGAGAGTaGACGCAGAGGTCGCTCCCAGGTCCTGTCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLEPAHDDFSGE*TQRSLPGPVRS Trigger: GGACCTGACAGGACCTGGGAGCGACCTCTGCGTCCACTCTCCAGAGAAGTCATCGTGCGCTGGTTCAAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
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| CDS CCA 72 bp | ACATGGTGCTTAGGCCAGCAACAGTGCCCTTCTGGATaGCTCGGAGTGAATGGCGCCGGTACTCATCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: TWCLGQQQCPSG*LGVNGAGTHPG Trigger: CCCGGGATGAGTACCGGCGCCATTCACTCCGAGCCATCCAGAAGGGCACTGTTGCTGGCCTAAGCACCATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS CAA 72 bp | TCACCATCTGCTCCCAGAAGCCACTGGAGATGCTTGTaGCTCGCTCTCTTGACCTTTGCGGGCCTCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SPSAPRSHWRCL*LALLTFAGLRP Trigger: GGGCCTGAGGCCCGCAAAGGTCAAGAGAGCGAGCAACAAGCATCTCCAGTGGCTTCTGGGAGCAGATGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS CAA 90 bp | CTTGGCTGTGCAGCTGGGCCTGCTTCAGAGTCCAGTAGAGTTCCTTaGCCCTCTGCTCCTCTTGGAGCCGAATCTGTTCTTCCCCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: LGCAAGPASESSRVP*PSAPLGAESVLPLA Trigger: GGCGAGGGGAAGAACAGATTCGGCTCCAAGAGGAGCAGAGGGCAAAGGAACTCTACTGGACTCTGAAGCAGGCCCAGCTGCACAGCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS CAA 90 bp | TTGGTGTTCCTCTCAAAGCCTGCTCGGCGAGGCAGCTGTTCCTCCTaGAACCAGCGCACGATGACTTCTCTGGAGAGTGGACGCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: LVFLSKPARRGSCSS*NQRTMTSLESGRRG Trigger: ACCTCTGCGTCCACTCTCCAGAGAAGTCATCGTGCGCTGGTTCAAGGAGGAACAGCTGCCTCGCCGAGCAGGCTTTGAGAGGAACACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
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| CDS CAA 90 bp | GGCCTGCTTCAGAGTCCAGTAGAGTTCCTTTGCCCTCTGCTCCTCTaGGAGCCGAATCTGTTCTTCCCCTCGCCGCCTCTCTTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GLLQSPVEFLCPLLL*EPNLFFPSPPLFFL Trigger: GAGGAAGAAGAGAGGCGGCGAGGGGAAGAACAGATTCGGCTCCAAGAGGAGCAGAGGGCAAAGGAACTCTACTGGACTCTGAAGCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS GCA 72 bp | CAGACCTCACCATCTGCTCCCAGAAGCCACTGGAGATaGTTGTTGCTCGCTCTCTTGACCTTTGCGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: QTSPSAPRSHWR*LLLALLTFAGL Trigger: GAGGCCCGCAAAGGTCAAGAGAGCGAGCAACAAGCATCTCCAGTGGCTTCTGGGAGCAGATGGTGAGGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS CAA 72 bp | CTCTCAAAGCCTGCTCGGCGAGGCAGCTGTTCCTCCTaGAACCAGCGCACGATGACTTCTCTGGAGAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LSKPARRGSCSS*NQRTMTSLESG Trigger: TCCACTCTCCAGAGAAGTCATCGTGCGCTGGTTCAAGGAGGAACAGCTGCCTCGCCGAGCAGGCTTTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
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| CDS CAA 72 bp | ACCTCACCATCTGCTCCCAGAAGCCACTGGAGATGCTaGTTGCTCGCTCTCTTGACCTTTGCGGGCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TSPSAPRSHWRC*LLALLTFAGLR Trigger: CCTGAGGCCCGCAAAGGTCAAGAGAGCGAGCAACAAGCATCTCCAGTGGCTTCTGGGAGCAGATGGTGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS CAA 72 bp | CAGAGTCCAGTAGAGTTCCTTTGCCCTCTGCTCCTCTaGGAGCCGAATCTGTTCTTCCCCTCGCCGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: QSPVEFLCPLLL*EPNLFFPSPPL Trigger: GAGAGGCGGCGAGGGGAAGAACAGATTCGGCTCCAAGAGGAGCAGAGGGCAAAGGAACTCTACTGGACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS GCA 72 bp | CTTGCTCGTGGTTCTGGCCAAGCTCTTGGAACATGGTaGTTAGGCCAGCAACAGTGCCCTTCTGGATGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LARGSGQALGTW*LGQQQCPSGWL Trigger: GAGCCATCCAGAAGGGCACTGTTGCTGGCCTAAGCACCATGTTCCAAGAGCTTGGCCAGAACCACGAGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS CCA 72 bp | CCTCTTGCTCGTGGTTCTGGCCAAGCTCTTGGAACATaGTGCTTAGGCCAGCAACAGTGCCCTTCTGGATGG | + |
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Preference number: 6 (lower is better) Translates to: PLARGSGQALGT*CLGQQQCPSGW Trigger: CCATCCAGAAGGGCACTGTTGCTGGCCTAAGCACCATGTTCCAAGAGCTTGGCCAGAACCACGAGCAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS CCA 72 bp | AGTCTTGCCTCTTGCTCGTGGTTCTGGCCAAGCTCTTaGAACATGGTGCTTAGGCCAGCAACAGTGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLASCSWFWPSS*NMVLRPATVPF Trigger: GAAGGGCACTGTTGCTGGCCTAAGCACCATGTTCCAAGAGCTTGGCCAGAACCACGAGCAAGAGGCAAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS CAA 72 bp | GCAGCTGGGCCTGCTTCAGAGTCCAGTAGAGTTCCTTaGCCCTCTGCTCCTCTTGGAGCCGAATCTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: AAGPASESSRVP*PSAPLGAESVL Trigger: AAGAACAGATTCGGCTCCAAGAGGAGCAGAGGGCAAAGGAACTCTACTGGACTCTGAAGCAGGCCCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS TCA 72 bp | GGCGGTAGGACAGGGTATAACCCCAGATCTTCTCACTaGCCCGGACCAGAAATGCTCCCTCGGTCATATTCT | + |
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Preference number: 6 (lower is better) Translates to: GGRTGYNPRSSH*PGPEMLPRSYS Trigger: AGAATATGACCGAGGGAGCATTTCTGGTCCGGGTCAGTGAGAAGATCTGGGGTTATACCCTGTCCTACCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
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| CDS GCA 72 bp | AGCCTTGCGGTCCTCCATCTCCACTTTCCACTTCTCTaGCAGAATCCGAGCTTTCTCATTGGCCAAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: SLAVLHLHFPLL*QNPSFLIGQGI Trigger: GATGCCTTGGCCAATGAGAAAGCTCGGATTCTGGCAGAGAAGTGGAAAGTGGAGATGGAGGACCGCAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS TCA 72 bp | GCATCTTATAGAAGAGGATGTGCTTCTGCACATCGCTaGGCTCGGCCAACAGCTCCGGGTCGATGTACATGT | + |
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Preference number: 6 (lower is better) Translates to: ASYRRGCASAHR*ARPTAPGRCTC Trigger: ACATGTACATCGACCCGGAGCTGTTGGCCGAGCTCAGCGATGTGCAGAAGCACATCCTCTTCTATAAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS CAA 90 bp | TCCATCTCCACTTTCCACTTCTCTGCCAGAATCCGAGCTTTCTCATaGGCCAAGGCATCCCGGAACTTCTTGGTGATCTCTGCTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SISTFHFSARIRAFS*AKASRNFLVISASF Trigger: GAAGGAAGCAGAGATCACCAAGAAGTTCCGGGATGCCTTGGCCAATGAGAAAGCTCGGATTCTGGCAGAGAAGTGGAAAGTGGAGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS GCA 72 bp | ATAACCCCAGATCTTCTCACTGACCCGGACCAGAAATaGTCCCTCGGTCATATTCTCCAGAAGGTCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ITPDLLTDPDQK*SLGHILQKVFC Trigger: GCAGAAGACCTTCTGGAGAATATGACCGAGGGAGCATTTCTGGTCCGGGTCAGTGAGAAGATCTGGGGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
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| CDS CAA 72 bp | ATGGTGGACTGGTGTCAGGAAGTTGGTGATAAAGTCTaGCCTCTTGCTCGTGGTTCTGGCCAAGCTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: MVDWCQEVGDKV*PLARGSGQALG Trigger: TCCAAGAGCTTGGCCAGAACCACGAGCAAGAGGCAAGACTTTATCACCAACTTCCTGACACCAGTCCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
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| CDS CAA 72 bp | ACTTTCCACTTCTCTGCCAGAATCCGAGCTTTCTCATaGGCCAAGGCATCCCGGAACTTCTTGGTGATCTCT | + |
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Preference number: 6 (lower is better) Translates to: TFHFSARIRAFS*AKASRNFLVIS Trigger: AGAGATCACCAAGAAGTTCCGGGATGCCTTGGCCAATGAGAAAGCTCGGATTCTGGCAGAGAAGTGGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS CAA 72 bp | ACTGGTGTCAGGAAGTTGGTGATAAAGTCTTGCCTCTaGCTCGTGGTTCTGGCCAAGCTCTTGGAACATGGT | + |
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Preference number: 6 (lower is better) Translates to: TGVRKLVIKSCL*LVVLAKLLEHG Trigger: ACCATGTTCCAAGAGCTTGGCCAGAACCACGAGCAAGAGGCAAGACTTTATCACCAACTTCCTGACACCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096000.4 |
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| CDS CCA 72 bp | AACTCTCCCCCTGAAACAGTGATGATCTCCTCCTTGTaGAAATCAATGAGATCTGTTAGGGTGGCATGGCGA | + |
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Preference number: 6 (lower is better) Translates to: NSPPETVMISSL*KSMRSVRVAWR Trigger: TCGCCATGCCACCCTAACAGATCTCATTGATTTCCACAAGGAGGAGATCATCACTGTTTCAGGGGGAGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
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| CDS CAA 72 bp | AGCAACTCTCCCCCTGAAACAGTGATGATCTCCTCCTaGTGGAAATCAATGAGATCTGTTAGGGTGGCATGG | + |
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Preference number: 6 (lower is better) Translates to: SNSPPETVMISS*WKSMRSVRVAW Trigger: CCATGCCACCCTAACAGATCTCATTGATTTCCACAAGGAGGAGATCATCACTGTTTCAGGGGGAGAGTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
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| CDS GCA 72 bp | AAATGCTCCCTCGGTCATATTCTCCAGAAGGTCTTCTaGACTCTCTCGGCTAATAATTCCATGAAACCAAGG | + |
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Preference number: 6 (lower is better) Translates to: KCSLGHILQKVF*TLSANNSMKPR Trigger: CCTTGGTTTCATGGAATTATTAGCCGAGAGAGTGCAGAAGACCTTCTGGAGAATATGACCGAGGGAGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070328.10 ENSMUST00000096000.4 |
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