Pregenerated sensors for SH2D4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053886Ensembl transcript IDs: ENSMUST00000066594.4, ENSMUST00000212166.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCTCAGGCAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTaGCACACTTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SLRQLGGGSQSPPPQ*HTSSNKATPPPTRP Trigger: TGGCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTGCCTGAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| 3UTR CCA 90 bp | TGCAGAAGAGAGGTTTCAATGAAGACCTCAGACGTTGTTCACTGTTaGCTCTGTCACAGAGAGATTTTGGCATCACACACAAATGTCCAT | + |
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Preference number: 1 (lower is better) Translates to: CRREVSMKTSDVVHC*LCHREILASHTNVH Trigger: ATGGACATTTGTGTGTGATGCCAAAATCTCTCTGTGACAGAGCCAACAGTGAACAACGTCTGAGGTCTTCATTGAAACCTCTCTTCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| 3UTR CCA 90 bp | CATATCCTTCAAGGTCCTATCCTTCATATTAGGATGTTGCAAATGTaGGTACCTTCCCCCTTTTCCTTTCAGAATGAGGATGAGAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: HILQGPILHIRMLQM*VPSPFSFQNEDERE Trigger: CTCTCTCTCATCCTCATTCTGAAAGGAAAAGGGGGAAGGTACCCACATTTGCAACATCCTAATATGAAGGATAGGACCTTGAAGGATATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGGAGGAGCTGAGAGTTCTGCATCTTCTTCCGAAGGGAACCAGAAGACTAAACCAGCTGGAAGTTaGAGGCTGATCTGGATGAGA | + |
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Preference number: 2 (lower is better) Translates to: GRGGAESSASSSEGNQKTKPAGS*RLIWMR Trigger: TCTCATCCAGATCAGCCTCCAACTTCCAGCTGGTTT...AGTCTTCTGGTTCCCTTCGGAAGAAGATGCAGAACTCTCAGCTCCTCCTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTGACACACTTCTTCCAAGTCACAGAGAGATTTTaGCATCACACACAAATGTCC | + |
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Preference number: 2 (lower is better) Translates to: AARRRVSKPTPTVTHFFQVTERF*HHTQMS Trigger: GGACATTTGTGTGTGATGCCAAAATCTCTCTGTGAC...TTGGAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| 3UTR-3UTR CCA 90 bp | TCCGAAGGGAACCAGAAGACTGAATCTCTCAGGCAGCTAGGAGGAGGGTCTCAAAATCTCATCCCTCAGTaGGGACATTTTTCCACCATT | + |
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Preference number: 2 (lower is better) Translates to: SEGNQKTESLRQLGGGSQNLIPQ*GHFSTI Trigger: AATGGTGGAAAAATGTCCCCACTGAGGGATGAGATT...TTGAGACCCTCCTCCTAGCTGCCTGAGAGATTCAGTCTTCTGGTTCCCTTCGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| 3UTR-3UTR CCA 90 bp | ACACACTTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCACACCTCCTAATTTATATACATCATCATaGTCATATCCTTCAAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: THFFQQSHTSSNKATPPNLYTSS*SYPSRS Trigger: GGACCTTGAAGGATATGACCATGATGATGTATATAA...ATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| 3UTR-3UTR TCA 90 bp | ACCTCACTCCAACAGACACAGAAAGGGTGGTCTTTTGAAGATAATCTCATCCCTACTGAGACCTTTGAGTaGATAACAAAAAGGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: TSLQQTQKGWSFEDNLIPTETFE*ITKREC Trigger: ACACTCCCTTTTTGTTATTCACTCAAAGGTCTCAGT...AGGGATGAGATTATCTTCAAAAGACCACCCTTTCTGTGTCTGTTGGAGTGAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| 3UTR-3UTR CAA 90 bp | CAGGCAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTGACACACTTCTTCGAAACCAGCTGGAAGTaGGAGGCTGATCTGGATGAG | + |
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Preference number: 3 (lower is better) Translates to: QAARRRVSKPTPTVTHFFETSWK*EADLDE Trigger: CTCATCCAGATCAGCCTCCAACTTCCAGCTGGTTTC...GAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| 3UTR TCA 72 bp | CAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTaGCACACTTCTTCCAACAAAGCCACACCTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: QLGGGSQSPPPQ*HTSSNKATPPP Trigger: TGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| 3UTR TCA 72 bp | GAGTTCTGCATCTTCTTCCGAAGGGAACCAGAAGACTaGATCTCTCAGGCAGCTAGGAGGAGGGTCTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: EFCIFFRREPED*ISQAARRRVSK Trigger: CTTTGAGACCCTCCTCCTAGCTGCCTGAGAGATTCAGTCTTCTGGTTCCCTTCGGAAGAAGATGCAGAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAGGGTCTCAAAGCCCACCCCCACAGTGACACACTTCTTCCAACAAAGCCACTGTCACAGAGAGATTTaGGCATCACACACAAATGTC | + |
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Preference number: 3 (lower is better) Translates to: RRVSKPTPTVTHFFQQSHCHREI*ASHTNV Trigger: GACATTTGTGTGTGATGCCAAAATCTCTCTGTGACA...GTGGCTTTGTTGGAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| 3UTR-3UTR CAA 90 bp | TCCGAAGGGAACCAGAAGACTGAATCTCTCAGGCAGCTAGGAGGAGGGTCTCAAGTCACAATAAAACCTTaGGTTGGTTGGTTGGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: SEGNQKTESLRQLGGGSQVTIKP*VGWLVF Trigger: AAAAACCAACCAACCAACCAAAGGTTTTATTGTGAC...TTGAGACCCTCCTCCTAGCTGCCTGAGAGATTCAGTCTTCTGGTTCCCTTCGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| 3UTR CCA 72 bp | GAGGTTTCAATGAAGACCTCAGACGTTGTTCACTGTTaGCTCTGTCACAGAGAGATTTTGGCATCACACACA | + |
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Preference number: 3 (lower is better) Translates to: EVSMKTSDVVHC*LCHREILASHT Trigger: TGTGTGTGATGCCAAAATCTCTCTGTGACAGAGCCAACAGTGAACAACGTCTGAGGTCTTCATTGAAACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| 3UTR TCA 72 bp | ACTGAATCCAGCATTTATGCAGAAGAGAGGTTTCAATaGAGACCTCAGACGTTGTTCACTGTTGGCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: TESSIYAEERFQ*RPQTLFTVGSV Trigger: GACAGAGCCAACAGTGAACAACGTCTGAGGTCTTCATTGAAACCTCTCTTCTGCATAAATGCTGGATTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| 3UTR CCA 72 bp | CAAGGTCCTATCCTTCATATTAGGATGTTGCAAATGTaGGTACCTTCCCCCTTTTCCTTTCAGAATGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: QGPILHIRMLQM*VPSPFSFQNED Trigger: ATCCTCATTCTGAAAGGAAAAGGGGGAAGGTACCCACATTTGCAACATCCTAATATGAAGGATAGGACCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| 3UTR GCA 72 bp | ATATCCTTCAAGGTCCTATCCTTCATATTAGGATGTTaGAAATGTGGGTACCTTCCCCCTTTTCCTTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: ISFKVLSFILGC*KCGYLPPFPFR Trigger: TCTGAAAGGAAAAGGGGGAAGGTACCCACATTTGCAACATCCTAATATGAAGGATAGGACCTTGAAGGATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| CDS-3UTR TCA 90 bp | CAGGCAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTGACACACTTCTTCGTTTCTGCTCTTCGCTaGGCTCTGCCAGCAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: QAARRRVSKPTPTVTHFFVSALR*ALPAGQ Trigger: CTGACCTGCTGGCAGAGCTCAGCGAAGAGCAGAAAC...GAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| CDS-3UTR GCA 90 bp | ACCTCCTCCAACAAGGCCACACCTCCTAATACTACCACTCCCTGTGGGCCAAGCACCCAAACCCACACCTaGTTATCGGCGCCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: TSSNKATPPNTTTPCGPSTQTHT*LSAPSF Trigger: GAAGCTGGGCGCCGATAAGCAGGTGTGGGTTTGGGT...GCTTGGCCCACAGGGAGTGGTAGTATTAGGAGGTGTGGCCTTGTTGGAGGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR GCA 90 bp | CCCACCCCCACAGTGACACACTTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCAGTGTAGCATGCTaGAGCTGGTCCACACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PTPTVTHFFQQSHTSSNKASVAC*SWSTPR Trigger: CCTGGGTGTGGACCAGCTGCAGCATGCTACACTGGC...CTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGTCACTGTGGGGGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR GCA 90 bp | CACCCCCACAGTGACACACTTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCGCCAGTGTAGCATGCTaGAGCTGGTCCACACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HPHSDTLLPTKPHLLQQGASVAC*SWSTPR Trigger: CCTGGGTGTGGACCAGCTGCAGCATGCTACACTGGC...GCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGTCACTGTGGGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CCA 90 bp | GCAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTGACACACTTCTTCCAACGAATGGTGTCCATCTaGGCGGAGCTGATCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: AARRRVSKPTPTVTHFFQRMVSI*AELISV Trigger: GACCGAGATCAGCTCCGCCCAGATGGACACCATTCG...TTGGAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR GCA 90 bp | GCCCACCCCCACAGTGACACACTTCTTCCAACAAAGCCACACCTCCTCCAACAATTCGCTGCTCTCAGATaGTCCCTCTCCGCAAGGATC | + |
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Preference number: 4 (lower is better) Translates to: AHPHSDTLLPTKPHLLQQFAALR*SLSARI Trigger: GATCCTTGCGGAGAGGGAGCATCTGAGAGCAGCGAA...TTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGTCACTGTGGGGGTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR TCA 90 bp | ACCTCCTCCAACAAGGCCACACCTCCTAATACTACCACTCCCTGTGGGCCAAGCAAGCTGCTTTCCTGGTaGCATTCTGAGGCTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: TSSNKATPPNTTTPCGPSKLLSW*HSEALS Trigger: AGACAGAGCCTCAGAATGTCACCAGGAAAGCAGCTT...GCTTGGCCCACAGGGAGTGGTAGTATTAGGAGGTGTGGCCTTGTTGGAGGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR TCA 90 bp | GCAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTGACACACTTCTTCCAAAAGCTGCTTTCCTGGTaGCATTCTGAGGCTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: AARRRVSKPTPTVTHFFQKLLSW*HSEALS Trigger: AGACAGAGCCTCAGAATGTCACCAGGAAAGCAGCTT...TTGGAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR GCA 90 bp | GAAGGGAACCAGAAGACTGAATCTCTCAGGCAGCTAGGAGGAGGGTCTCAAAGCCTCTTCGCTGAGCTCTaGCAGCAGGTCAGGGTCTAT | + |
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Preference number: 4 (lower is better) Translates to: EGNQKTESLRQLGGGSQSLFAEL*QQVRVY Trigger: ATAGACCCTGACCTGCTGGCAGAGCTCAGCGAAGAG...GCTTTGAGACCCTCCTCCTAGCTGCCTGAGAGATTCAGTCTTCTGGTTCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| CDS-3UTR CCA 90 bp | CAGGCAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTGACACACTTCTTCAGTGTGAGAATCCCATaGAACCAAGGAGCAATGGTG | + |
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Preference number: 4 (lower is better) Translates to: QAARRRVSKPTPTVTHFFSVRIP*NQGAMV Trigger: CACCATTGCTCCTTGGTTCCATGGGATTCTCACACT...GAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR TCA 90 bp | CACCCCCACAGTGACACACTTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCGAGACTGAGTTTTCCTaGGCTCTGAATCCTTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: HPHSDTLLPTKPHLLQQGETEFS*ALNPSL Trigger: CAGCGAAGGATTCAGAGCTCAGGAAAACTCAGTCTC...GCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGTCACTGTGGGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR GCA 90 bp | GCCACACCTCCTAATACTACCACTCCCTGTGGGCCAAGCATATTCAAACCATCAACCCAAACCCACACCTaGTTATCGGCGCCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ATPPNTTTPCGPSIFKPSTQTHT*LSAPSF Trigger: GAAGCTGGGCGCCGATAAGCAGGTGTGGGTTTGGGT...TGATGGTTTGAATATGCTTGGCCCACAGGGAGTGGTAGTATTAGGAGGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR GCA 90 bp | GCCACACCTCCTCCAACAAGGCCACACCTCCTAATACTACCACTCCCTGTGGGCTTCTCATCCTCTGTCTaGTTCATTTCCTCGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: ATPPPTRPHLLILPLPVGFSSSV*FISSWS Trigger: AGACCACGAGGAAATGAAGCAGACAGAGGATGAGAA...GCCCACAGGGAGTGGTAGTATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CCA 90 bp | GCCACACCTCCTCCAACAAGGCCACACCTCCTAATACTACCACTCCCTGTGGGCTGCTTCATTTCCTCGTaGTCTTTTTCCTTGACGGGT | + |
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Preference number: 4 (lower is better) Translates to: ATPPPTRPHLLILPLPVGCFISS*SFSLTG Trigger: ACCCGTCAAGGAAAAAGACCACGAGGAAATGAAGCA...GCCCACAGGGAGTGGTAGTATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CCA 90 bp | GAGCTGAGAGTTCTGCATCTTCTTCCGAAGGGAACCAGAAGACTGAATCTCTCACTGTGGACCTGTCAGTaGGTTCTGCAGTCCGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: ELRVLHLLPKGTRRLNLSLWTCQ*VLQSVP Trigger: GGGGACGGACTGCAGAACCCACTGACAGGTCCACAG...TGAGAGATTCAGTCTTCTGGTTCCCTTCGGAAGAAGATGCAGAACTCTCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR TCA 90 bp | GCAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTGACACACTTCTTCCAAAGATGCTTGCCATTCTaGGTCTTCTTTCCAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: AARRRVSKPTPTVTHFFQRCLPF*VFFPAL Trigger: AAGAGCTGGAAAGAAGACTCAGAATGGCAAGCATCT...TTGGAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CCA 90 bp | GAGCTGAGAGTTCTGCATCTTCTTCCGAAGGGAACCAGAAGACTGAATCTCTCAGTAGCATGCTGCAGCTaGTCCACACCCAGGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ELRVLHLLPKGTRRLNLSVACCS*STPRKL Trigger: CAGCTTCCTGGGTGTGGACCAGCTGCAGCATGCTAC...TGAGAGATTCAGTCTTCTGGTTCCCTTCGGAAGAAGATGCAGAACTCTCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CCA 90 bp | CAGGCAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTGACACACTTCTTCAATCTCATCCCTCAGTaGGGACATTTTTCCACCATT | + |
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Preference number: 4 (lower is better) Translates to: QAARRRVSKPTPTVTHFFNLIPQ*GHFSTI Trigger: AATGGTGGAAAAATGTCCCCACTGAGGGATGAGATT...GAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000212166.2 |
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| CDS-3UTR GCA 90 bp | CAGGCAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTGACACACTTCTTCCAGCTCTTGTATATCTaGTTGGTTTTCTCATCCTCT | + |
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Preference number: 4 (lower is better) Translates to: QAARRRVSKPTPTVTHFFQLLYI*LVFSSS Trigger: AGAGGATGAGAAAACCAAGCAGATATACAAGAGCTG...GAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CCA 90 bp | CAGGCAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTGACACACTTCTTCCAGACACAGAAAGGGTaGTCTTTTGAAGATAATCTC | + |
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Preference number: 4 (lower is better) Translates to: QAARRRVSKPTPTVTHFFQTQKG*SFEDNL Trigger: GAGATTATCTTCAAAAGACCACCCTTTCTGTGTCTG...GAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212166.2 |
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| CDS-3UTR TCA 90 bp | GCCACACCTCCTAATACTACCACTCCCTGTGGGCCAAGCATATTCAAACCATCAATTGCTCTGGGTCCTTaGCCTGATGCCTCTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: ATPPNTTTPCGPSIFKPSIALGP*PDASSE Trigger: TTCAGAAGAGGCATCAGGTCAAGGACCCAGAGCAAT...TGATGGTTTGAATATGCTTGGCCCACAGGGAGTGGTAGTATTAGGAGGTGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR TCA 90 bp | ACACACTTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCACACCTCCTAATATGGGCTCCTCCTTGTaGTATTCCACCAAATCTGCC | + |
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Preference number: 4 (lower is better) Translates to: THFFQQSHTSSNKATPPNMGSSL*YSTKSA Trigger: GGCAGATTTGGTGGAATATCACAAGGAGGAGCCCAT...ATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| CDS-3UTR GCA 90 bp | GGATGTTGCAAATGTGGGTACCTTCCCCCTTTTCCTTTCAGAATGAGGATGAGATTCGCTGCTCTCAGATaGTCCCTCTCCGCAAGGATC | + |
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Preference number: 4 (lower is better) Translates to: GCCKCGYLPPFPFRMRMRFAALR*SLSARI Trigger: GATCCTTGCGGAGAGGGAGCATCTGAGAGCAGCGAA...TCTCATCCTCATTCTGAAAGGAAAAGGGGGAAGGTACCCACATTTGCAACATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| CDS-3UTR CCA 90 bp | CACACTTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCACACCTCCTAATATGGTTGGTATTGCTCTaGGTCCTTGACCTGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: HTSSNKATPPPTRPHLLIWLVLL*VLDLMP Trigger: AGGCATCAGGTCAAGGACCCAGAGCAATACCAACCA...TATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CCA 90 bp | CATTTATGCAGAAGAGAGGTTTCAATGAAGACCTCAGACGTTGTTCACTGTTGGCTGTGGACCTGTCAGTaGGTTCTGCAGTCCGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: HLCRREVSMKTSDVVHCWLWTCQ*VLQSVP Trigger: GGGGACGGACTGCAGAACCCACTGACAGGTCCACAG...CCAACAGTGAACAACGTCTGAGGTCTTCATTGAAACCTCTCTTCTGCATAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| CDS-3UTR CCA 90 bp | GGCAGAGGAGGAGCTGAGAGTTCTGCATCTTCTTCCGAAGGGAACCAGAAGACTGTAACCTGCACGGAATaGCAACTGTTCCTCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: GRGGAESSASSSEGNQKTVTCTE*QLFLFE Trigger: TTCAAAGAGGAACAGTTGCCATTCCGTGCAGGTTAC...AGTCTTCTGGTTCCCTTCGGAAGAAGATGCAGAACTCTCAGCTCCTCCTCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CCA 90 bp | GAAGGGAACCAGAAGACTGAATCTCTCAGGCAGCTAGGAGGAGGGTCTCAAAGCGGAACCAAGGAGCAATaGTGTCTGAGTTTTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: EGNQKTESLRQLGGGSQSGTKEQ*CLSFSG Trigger: ACCAGAAAAACTCAGACACCATTGCTCCTTGGTTCC...GCTTTGAGACCCTCCTCCTAGCTGCCTGAGAGATTCAGTCTTCTGGTTCCCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR TCA 90 bp | CCTCCTAATACTACCACTCCCTGTGGGCCAAGCATATTCAAACCATCACACTCAGAGACTGAGTTTTCCTaGGCTCTGAATCCTTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: PPNTTTPCGPSIFKPSHSETEFS*ALNPSL Trigger: CAGCGAAGGATTCAGAGCTCAGGAAAACTCAGTCTC...TGAGTGTGATGGTTTGAATATGCTTGGCCCACAGGGAGTGGTAGTATTAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR TCA 90 bp | ACACACTTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCACACCTCCTAATGTCCTTATCACCCCCTaGTTCCCTAAAGACTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: THFFQQSHTSSNKATPPNVLITP*FPKDFG Trigger: TCCAAAGTCTTTAGGGAATCAGGGGGTGATAAGGAC...ATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGCCACACCTCCTCCAACAAGGCCACACCTCCTAATACTACCACTCCCTGTGTCTTCTTCATTGCTTaGAGATCACAGTTCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSHTSSNKATPPNTTTPCVFFIA*RSQFCD Trigger: GTCACAGAACTGTGATCTGCAAGCAATGAAGAAGAC...ACAGGGAGTGGTAGTATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCTAGGAGGAGGGTCTCAAAGCCCACCCCCACAGTGACACACTTCTTCCAAGCTCAGAAGTTCATTTaGTTTCTTCAGTGTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AARRRVSKPTPTVTHFFQAQKFI*FLQCEN Trigger: ATTCTCACACTGAAGAAAGCAAATGAACTTCTGAGC...TTGGAAGAAGTGTGTCACTGTGGGGGTGGGCTTTGAGACCCTCCTCCTAGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR GCA 90 bp | GCCACACCTCCTAATACTACCACTCCCTGTGGGCCAAGCATATTCAAACCATCATTCCCGGCACACCTGTaGTCAGAAGTTCATTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ATPPNTTTPCGPSIFKPSFPAHL*SEVHLL Trigger: AAGCAAATGAACTTCTGAGCACAGGTGTGCCGGGAA...TGATGGTTTGAATATGCTTGGCCCACAGGGAGTGGTAGTATTAGGAGGTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCTGCATCTTCTTCCGAAGGGAACCAGAAGACTGAATCTCTCAGGCAGCTGGCCTGGATTTCACTaGCAAGGACTCCTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVLHLLPKGTRRLNLSGSWPGFH*QGLLSF Trigger: GAAAGAAAGGAGTCCTTGCCAGTGAAATCCAGGCCA...GCTGCCTGAGAGATTCAGTCTTCTGGTTCCCTTCGGAAGAAGATGCAGAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTTCCAGACTGGTTGGTATTGCTCTaGGTCCTTGACCTGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASEFQSFIIKAGARHFPDWLVLL*VLDLMP Trigger: AGGCATCAGGTCAAGGACCCAGAGCAATACCAACCA...GTCTGGAAAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | ACACACTTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCACACCTCCTAATAGTGTGAGAATCCCATaGAACCAAGGAGCAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: THFFQQSHTSSNKATPPNSVRIP*NQGAMV Trigger: CACCATTGCTCCTTGGTTCCATGGGATTCTCACACT...ATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCTGCATCTTCTTCCGAAGGGAACCAGAAGACTGAATCTCTCAGGCAGCTCCCCAGAGAGGTTATaGGCTCCTCCTTGTGATATT | + |
|
Preference number: 4 (lower is better) Translates to: RVLHLLPKGTRRLNLSGSSPERL*APPCDI Trigger: AATATCACAAGGAGGAGCCCATAACCTCTCTGGGGA...GCTGCCTGAGAGATTCAGTCTTCTGGTTCCCTTCGGAAGAAGATGCAGAACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
||
| CDS-3UTR TCA 90 bp | GAGCTGAGAGTTCTGCATCTTCTTCCGAAGGGAACCAGAAGACTGAATCTCTCAGCGAGTTCTAGAGACTaGGTTTTCCTGAGCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELRVLHLLPKGTRRLNLSASSRD*VFLSSE Trigger: TTCAGAGCTCAGGAAAACTCAGTCTCTAGAACTCGC...TGAGAGATTCAGTCTTCTGGTTCCCTTCGGAAGAAGATGCAGAACTCTCAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR TCA 90 bp | GCTTACAGCTTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTATTGCTCTGGGTCCTTaGCCTGATGCCTCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AYSFRVSVLYNQGRSAAFIALGP*PDASSE Trigger: TTCAGAAGAGGCATCAGGTCAAGGACCCAGAGCAAT...AAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAAGCTGTAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR TCA 90 bp | ACACACTTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCACACCTCCTAATAGATGCTTGCCATTCTaGGTCTTCTTTCCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: THFFQQSHTSSNKATPPNRCLPF*VFFPAL Trigger: AAGAGCTGGAAAGAAGACTCAGAATGGCAAGCATCT...ATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTTCCAGACGCAACTGTTCCTCTTTaGACCATCGAATGGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASEFQSFIIKAGARHFPDATVPL*TIEWCP Trigger: TGGACACCATTCGATGGTTCAAAGAGGAACAGTTGC...GTCTGGAAAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR GCA 90 bp | ACACACTTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCACACCTCCTAATTTCTCATCCTCTGTCTaGTTCATTTCCTCGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: THFFQQSHTSSNKATPPNFSSSV*FISSWS Trigger: AGACCACGAGGAAATGAAGCAGACAGAGGATGAGAA...ATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR GCA 90 bp | GCCACACCTCCTAATACTACCACTCCCTGTGGGCCAAGCATATTCAAACCATCAATATTCCACCAAATCTaGCAGTGTAGCATGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATPPNTTTPCGPSIFKPSIFHQI*QCSMLQ Trigger: CTGCAGCATGCTACACTGGCAGATTTGGTGGAATAT...TGATGGTTTGAATATGCTTGGCCCACAGGGAGTGGTAGTATTAGGAGGTGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCACACCTCCTAATACTACCGGAACCAAGGAGCAATaGTGTCTGAGTTTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FFQQSHTSSNKATPPNTTGTKEQ*CLSFSG Trigger: ACCAGAAAAACTCAGACACCATTGCTCCTTGGTTCC...GGTAGTATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR TCA 90 bp | GAGCTGAGAGTTCTGCATCTTCTTCCGAAGGGAACCAGAAGACTGAATCTCTCAGCAGGTCAGGGTCTATaGACATATCTGACAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: ELRVLHLLPKGTRRLNLSAGQGL*TYLTVS Trigger: AGATACTGTCAGATATGTTCATAGACCCTGACCTGC...TGAGAGATTCAGTCTTCTGGTTCCCTTCGGAAGAAGATGCAGAACTCTCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
||
| CDS-3UTR GCA 90 bp | TTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCACACCTCCTAATACTACCTTTCGCAGAGATGCTTaGCATTCTGAGTCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFQQSHTSSNKATPPNTTFRRDA*HSESSF Trigger: GAAAGAAGACTCAGAATGGCAAGCATCTCTGCGAAA...GGTAGTATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR GCA 90 bp | GCTTACAGCTTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTTTCCCGGCACACCTGTaGTCAGAAGTTCATTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AYSFRVSVLYNQGRSAAFFPAHL*SEVHLL Trigger: AAGCAAATGAACTTCTGAGCACAGGTGTGCCGGGAA...AAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAAGCTGTAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTTCCAGACATATTCCACCAAATCTaGCAGTGTAGCATGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASEFQSFIIKAGARHFPDIFHQI*QCSMLQ Trigger: CTGCAGCATGCTACACTGGCAGATTTGGTGGAATAT...GTCTGGAAAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAGAGTTCTGCATCTTCTTCCGAAGGGAACCAGAAGACTGAATCTCTCAACTCCTTTCTTTCCATaGCCGCTTCTCTTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELRVLHLLPKGTRRLNLSTPFFP*PLLFLS Trigger: GGAAAGAAAGAGAAGCGGCCATGGAAAGAAAGGAGT...TGAGAGATTCAGTCTTCTGGTTCCCTTCGGAAGAAGATGCAGAACTCTCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | TACAGCTTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTTCCTGGCCTGGATTTCACTaGCAAGGACTCCTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSFRVSVLYNQGRSAAFSWPGFH*QGLLSF Trigger: GAAAGAAAGGAGTCCTTGCCAGTGAAATCCAGGCCA...GGAAAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAAGCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | GCCCACCCCCACAGTGACACACTTCTTCCAACAAAGCCACACCTCCTCCAACAATTATTTTTAAGCTATTaGCGAGTTCTAGAGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AHPHSDTLLPTKPHLLQQLFLSY*RVLETE Trigger: CTCAGTCTCTAGAACTCGCCAATAGCTTAAAAATAA...TTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTGTCACTGTGGGGGTGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCATATTCAAACCATCACACTCAGGGTTACTGTCACAATAAAACCTTTGGTCGAATGGTGTCCATCTaGGCGGAGCTGATCTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QAYSNHHTQGYCHNKTFGRMVSI*AELISV Trigger: GACCGAGATCAGCTCCGCCCAGATGGACACCATTCG...ACCAAAGGTTTTATTGTGACAGTAACCCTGAGTGTGATGGTTTGAATATGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTAATACTACCACTCCCTGTGGGCCAAGCATATTCAAACCATCACACTCAGTAACCTGCACGGAATaGCAACTGTTCCTCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPNTTTPCGPSIFKPSHSVTCTE*QLFLFE Trigger: TTCAAAGAGGAACAGTTGCCATTCCGTGCAGGTTAC...TGAGTGTGATGGTTTGAATATGCTTGGCCCACAGGGAGTGGTAGTATTAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTAATTGGGGCTGGCTTACAGCTTCAGAGTTTCAGTCCTTTATAATCAAGGTAGCATGCTGCAGCTaGTCCACACCCAGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TFNWGWLTASEFQSFIIKVACCS*STPRKL Trigger: CAGCTTCCTGGGTGTGGACCAGCTGCAGCATGCTAC...CTTGATTATAAAGGACTGAAACTCTGAAGCTGTAAGCCAGCCCCAATTAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCACACCTCCTAATACTACCCAGCTCTTGTATATCTaGTTGGTTTTCTCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFQQSHTSSNKATPPNTTQLLYI*LVFSSS Trigger: AGAGGATGAGAAAACCAAGCAGATATACAAGAGCTG...GGTAGTATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | GCTTACAGCTTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTACTCCTTTCTTTCCATaGCCGCTTCTCTTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AYSFRVSVLYNQGRSAAFTPFFP*PLLFLS Trigger: GGAAAGAAAGAGAAGCGGCCATGGAAAGAAAGGAGT...AAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAAGCTGTAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTTCCAGACAGTGCTTCATTTCCTCGTaGTCTTTTTCCTTGACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FRVSVLYNQGRSAAFSRQCFISS*SFSLTG Trigger: ACCCGTCAAGGAAAAAGACCACGAGGAAATGAAGCA...CTGTCTGGAAAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | GGCCAAGCATATTCAAACCATCACACTCAGGGTTACTGTCACAATAAAACCTTTTCTTCTGGGCTTCTGTaGACCTGTCAGTGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQAYSNHHTQGYCHNKTFSSGLL*TCQWVL Trigger: CAGAACCCACTGACAGGTCCACAGAAGCCCAGAAGA...AAAGGTTTTATTGTGACAGTAACCCTGAGTGTGATGGTTTGAATATGCTTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| 3UTR CAA 72 bp | AGAGGTTTCAATGAAGACCTCAGACGTTGTTCACTGTaGGCTCTGTCACAGAGAGATTTTGGCATCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: RGFNEDLRRCSL*ALSQRDFGITH Trigger: GTGTGTGATGCCAAAATCTCTCTGTGACAGAGCCAACAGTGAACAACGTCTGAGGTCTTCATTGAAACCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTTCCAGACAGGTCTTCTTCATTGCTTaGAGATCACAGTTCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FRVSVLYNQGRSAAFSRQVFFIA*RSQFCD Trigger: GTCACAGAACTGTGATCTGCAAGCAATGAAGAAGAC...CTGTCTGGAAAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR GCA 90 bp | TACAGCTTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTTCCCTCTGTCTTCTTCATTaGTTGCAGATCACAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSFRVSVLYNQGRSAAFSLCLLH*LQITVL Trigger: CAGAACTGTGATCTGCAAGCAATGAAGAAGACAGAG...GGAAAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAAGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGAGAGTTCTGCATCTTCTTCCGAAGGGAACCAGAAGACTGAATCTCTCTCTTGTATATCTGCTTaGTTTTCTCATCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAESSASSSEGNQKTESLSCISA*FSHPLS Trigger: AGACAGAGGATGAGAAAACCAAGCAGATATACAAGA...GAGAGATTCAGTCTTCTGGTTCCCTTCGGAAGAAGATGCAGAACTCTCAGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTAATTGGGGCTGGCTTACAGCTTCAGAGTTTCAGTCCTTTATAATCAAGTCTTCTGGGCTTCTGTaGACCTGTCAGTGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TFNWGWLTASEFQSFIIKSSGLL*TCQWVL Trigger: CAGAACCCACTGACAGGTCCACAGAAGCCCAGAAGA...CTTGATTATAAAGGACTGAAACTCTGAAGCTGTAAGCCAGCCCCAATTAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR TCA 90 bp | GGCCAAGCATATTCAAACCATCACACTCAGGGTTACTGTCACAATAAAACCTTTGCAACTGTTCCTCTTTaGACCATCGAATGGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQAYSNHHTQGYCHNKTFATVPL*TIEWCP Trigger: TGGACACCATTCGATGGTTCAAAGAGGAACAGTTGC...AAAGGTTTTATTGTGACAGTAACCCTGAGTGTGATGGTTTGAATATGCTTGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTTTCAATGAAGACCTCAGACGTTGTTCACTGTTGGCTCTGTCACAGAGAGGCTCAGAAGTTCATTTaGTTTCTTCAGTGTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EVSMKTSDVVHCWLCHREAQKFI*FLQCEN Trigger: ATTCTCACACTGAAGAAAGCAAATGAACTTCTGAGC...CTCTCTGTGACAGAGCCAACAGTGAACAACGTCTGAGGTCTTCATTGAAACCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
||
| CDS-3UTR CCA 90 bp | GAGGTTTCAATGAAGACCTCAGACGTTGTTCACTGTTGGCTCTGTCACAGAGAGTCTTGTATATCTGCTTaGTTTTCTCATCCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVSMKTSDVVHCWLCHRESCISA*FSHPLS Trigger: AGACAGAGGATGAGAAAACCAAGCAGATATACAAGA...CTCTCTGTGACAGAGCCAACAGTGAACAACGTCTGAGGTCTTCATTGAAACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
||
| 3UTR CAA 72 bp | CATATCCTTCAAGGTCCTATCCTTCATATTAGGATGTaGCAAATGTGGGTACCTTCCCCCTTTTCCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HILQGPILHIRM*QMWVPSPFSFQ Trigger: CTGAAAGGAAAAGGGGGAAGGTACCCACATTTGCAACATCCTAATATGAAGGATAGGACCTTGAAGGATATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
||
| CDS-3UTR TCA 90 bp | ACATTTAATTGGGGCTGGCTTACAGCTTCAGAGTTTCAGTCCTTTATAATCAAGGTCCTTATCACCCCCTaGTTCCCTAAAGACTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TFNWGWLTASEFQSFIIKVLITP*FPKDFG Trigger: TCCAAAGTCTTTAGGGAATCAGGGGGTGATAAGGAC...CTTGATTATAAAGGACTGAAACTCTGAAGCTGTAAGCCAGCCCCAATTAAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS-3UTR TCA 90 bp | GGCCAAGCATATTCAAACCATCACACTCAGGGTTACTGTCACAATAAAACCTTTTTTCCACCATTCTTGTaGTATTCCACCAAATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQAYSNHHTQGYCHNKTFFPPFL*YSTKSA Trigger: GGCAGATTTGGTGGAATATCACAAGAATGGTGGAAA...AAAGGTTTTATTGTGACAGTAACCCTGAGTGTGATGGTTTGAATATGCTTGGCC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000212166.2 |
||
| CDS-3UTR GCA 90 bp | CAAGCATATTCAAACCATCACACTCAGGGTTACTGTCACAATAAAACCTTTGGTTTTCGCAGAGATGCTTaGCATTCTGAGTCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QAYSNHHTQGYCHNKTFGFRRDA*HSESSF Trigger: GAAAGAAGACTCAGAATGGCAAGCATCTCTGCGAAA...ACCAAAGGTTTTATTGTGACAGTAACCCTGAGTGTGATGGTTTGAATATGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
||
| CDS GCA 90 bp | CCCCAGAGAGGTTATGGGCTCCTCCTTGTGATATTCCACCAAATCTaGCAGTGTAGCATGCTGCAGCTGGTCCACACCCAGGAAGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PQRGYGLLLVIFHQI*QCSMLQLVHTQEAV Trigger: TACAGCTTCCTGGGTGTGGACCAGCTGCAGCATGCTACACTGGCAGATTTGGTGGAATATCACAAGGAGGAGCCCATAACCTCTCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
||
| CDS-3UTR CAA 90 bp | CACACTTCTTCCAACAAAGCCACACCTCCTCCAACAAGGCCACACCTCCTAATAGGGCAGCTTGTCTTGTaGACCACAGGGGTACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HTSSNKATPPPTRPHLLIGQLVL*TTGVQK Trigger: CTTCTGTACCCCTGTGGTCAACAAGACAAGCTGCCC...TATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCTTTGTTGGAAGAAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
||
| CDS-3UTR CAA 90 bp | GAAGACCTCAGACGTTGTTCACTGTTGGCTCTGTCACAGAGAGATTTTGGCATCCCTTCCTGGTTGGTATaGCTCTGGGTCCTTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: EDLRRCSLLALSQRDFGIPSWLV*LWVLDL Trigger: CAGGTCAAGGACCCAGAGCAATACCAACCAGGAAGG...GATGCCAAAATCTCTCTGTGACAGAGCCAACAGTGAACAACGTCTGAGGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| CDS GCA 90 bp | CAGTGGGGACATTTTTCCACCATTCTTGTGATATTCCACCAAATCTaGCAGTGTAGCATGCTGCAGCTGGTCCACACCCAGGAAGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: QWGHFSTILVIFHQI*QCSMLQLVHTQEAV Trigger: TACAGCTTCCTGGGTGTGGACCAGCTGCAGCATGCTACACTGGCAGATTTGGTGGAATATCACAAGAATGGTGGAAAAATGTCCCCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212166.2 |
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| CDS-3UTR CAA 90 bp | TCTTCTTCCGAAGGGAACCAGAAGACTGAATCTCTCAGGCAGCTAGGAGGAGGGTCTATAAGGAAATGTTaGCAGCCTTCCTCAGACAGG | + |
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Preference number: 5 (lower is better) Translates to: SSSEGNQKTESLRQLGGGSIRKC*QPSSDR Trigger: CCTGTCTGAGGAAGGCTGCAAACATTTCCTTATAGA...CCCTCCTCCTAGCTGCCTGAGAGATTCAGTCTTCTGGTTCCCTTCGGAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CAA 90 bp | TGGCTTACAGCTTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTCGTGGTCTTTTTCCTaGACGGGTTTAGTTTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: WLTASEFQSFIIKAGARHSWSFS*TGLVWA Trigger: AGCCCAAACTAAACCCGTCAAGGAAAAAGACCACGA...ATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAAGCTGTAAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CAA 90 bp | GCTTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTTCCAGACTCGTGGTCTTTTTCCTaGACGGGTTTAGTTTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: ASEFQSFIIKAGARHFPDSWSFS*TGLVWA Trigger: AGCCCAAACTAAACCCGTCAAGGAAAAAGACCACGA...GTCTGGAAAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CAA 90 bp | GCATATTCAAACCATCACACTCAGGGTTACTGTCACAATAAAACCTTTGGTTGGCCTTCCTGGTTGGTATaGCTCTGGGTCCTTGACCTG | + |
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Preference number: 5 (lower is better) Translates to: AYSNHHTQGYCHNKTFGWPSWLV*LWVLDL Trigger: CAGGTCAAGGACCCAGAGCAATACCAACCAGGAAGG...CCAACCAAAGGTTTTATTGTGACAGTAACCCTGAGTGTGATGGTTTGAATATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS TCA 90 bp | TTTCTTCAGTGTGAGAATCCCATGGAACCAAGGAGCAATGGTGTCTaGGTTTTTCTGGTAACCTGCACGGAATGGCAACTGTTCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: FLQCENPMEPRSNGV*VFLVTCTEWQLFLF Trigger: AAAGAGGAACAGTTGCCATTCCGTGCAGGTTACCAGAAAAACTCAGACACCATTGCTCCTTGGTTCCATGGGATTCTCACACTGAAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CAA 90 bp | GCTTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTTCCAGACCTCTTGTATATCTGCTaGGTTTTCTCATCCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: ASEFQSFIIKAGARHFPDLLYIC*VFSSSV Trigger: GACAGAGGATGAGAAAACCAAGCAGATATACAAGAG...GTCTGGAAAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS-3UTR CAA 90 bp | TTCAGAGTTTCAGTCCTTTATAATCAAGGCAGGAGCGCGGCATTTTCCAGACAGTCTATAAGGAAATGTTaGCAGCCTTCCTCAGACAGG | + |
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Preference number: 5 (lower is better) Translates to: FRVSVLYNQGRSAAFSRQSIRKC*QPSSDR Trigger: CCTGTCTGAGGAAGGCTGCAAACATTTCCTTATAGA...CTGTCTGGAAAATGCCGCGCTCCTGCCTTGATTATAAAGGACTGAAACTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS TCA 90 bp | CAGTTCTGTGACTTTATTTTTAAGCTATTGGCGAGTTCTAGAGACTaGGTTTTCCTGAGCTCTGAATCCTTCGCTGCTCTCAGATGCTCC | + |
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Preference number: 5 (lower is better) Translates to: QFCDFIFKLLASSRD*VFLSSESFAALRCS Trigger: GGAGCATCTGAGAGCAGCGAAGGATTCAGAGCTCAGGAAAACTCAGTCTCTAGAACTCGCCAATAGCTTAAAAATAAAGTCACAGAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS CCA 90 bp | CAGACACAGAAAGGGTGGTCTTTTGAAGATAATCTCATCCCTCAGTaGGGACATTTTTCCACCATTCTTGTGATATTCCACCAAATCTGC | + |
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Preference number: 5 (lower is better) Translates to: QTQKGWSFEDNLIPQ*GHFSTILVIFHQIC Trigger: GCAGATTTGGTGGAATATCACAAGAATGGTGGAAAAATGTCCCCACTGAGGGATGAGATTATCTTCAAAAGACCACCCTTTCTGTGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212166.2 |
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| CDS GCA 72 bp | GGTCTTCTGGGCTTCTGTGGACCTGTCAGTGGGTTCTaGAGTCCGTCCCCACTCCTCCCCCTTTGGGATAGC | + |
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Preference number: 6 (lower is better) Translates to: GLLGFCGPVSGF*SPSPLLPLWDS Trigger: GCTATCCCAAAGGGGGAGGAGTGGGGACGGACTGCAGAACCCACTGACAGGTCCACAGAAGCCCAGAAGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS CCA 72 bp | GTAGGAACTGGGGCTTCGGAGGAAGAGGAGGTCTTCTaGGCTTCTGTGGACCTGTCAGTGGGTTCTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: VGTGASEEEEVF*ASVDLSVGSAV Trigger: GACTGCAGAACCCACTGACAGGTCCACAGAAGCCCAGAAGACCTCCTCTTCCTCCGAAGCCCCAGTTCCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS TCA 72 bp | ATCTGGGCGGAGCTGATCTCGGTCCTTATCACCCCCTaGTTCCCTAAAGACTTTGGAGGGATTCCCAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: IWAELISVLITP*FPKDFGGIPSG Trigger: GCCGCTGGGAATCCCTCCAAAGTCTTTAGGGAATCAGGGGGTGATAAGGACCGAGATCAGCTCCGCCCAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS CCA 72 bp | AAAGACTTTGGAGGGATTCCCAGCGGCTGTAGGAACTaGGGCTTCGGAGGAAGAGGAGGTCTTCTGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KDFGGIPSGCRN*GFGGRGGLLGF Trigger: GAAGCCCAGAAGACCTCCTCTTCCTCCGAAGCCCCAGTTCCTACAGCCGCTGGGAATCCCTCCAAAGTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS CAA 72 bp | TCACTGGAAGAGCTCCAGGTAGTCGGGCAGCTTGTCTaGTTGACCACAGGGGTACAGAAGGAGTTCCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: SLEELQVVGQLV*LTTGVQKEFLP Trigger: GGGAAGGAACTCCTTCTGTACCCCTGTGGTCAACAAGACAAGCTGCCCGACTACCTGGAGCTCTTCCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066594.4 |
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| CDS GCA 72 bp | GTTTTCCTGAGCTCTGAATCCTTCGCTGCTCTCAGATaGTCCCTCTCCGCAAGGATCTCATCACACAGCACA | + |
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Preference number: 6 (lower is better) Translates to: VFLSSESFAALR*SLSARISSHST Trigger: TGTGCTGTGTGATGAGATCCTTGCGGAGAGGGAGCATCTGAGAGCAGCGAAGGATTCAGAGCTCAGGAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS TCA 72 bp | TTGTCATCCTTCCTGGTTGGTATTGCTCTGGGTCCTTaGCCTGATGCCTCTTCTGAAGCTGCTTTCCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LSSFLVGIALGP*PDASSEAAFLV Trigger: CACCAGGAAAGCAGCTTCAGAAGAGGCATCAGGTCAAGGACCCAGAGCAATACCAACCAGGAAGGATGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS CCA 72 bp | TTTGGGCTTTGTCATCCTTCCTGGTTGGTATTGCTCTaGGTCCTTGACCTGATGCCTCTTCTGAAGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: FGLCHPSWLVLL*VLDLMPLLKLL Trigger: AAGCAGCTTCAGAAGAGGCATCAGGTCAAGGACCCAGAGCAATACCAACCAGGAAGGATGACAAAGCCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS TCA 72 bp | TTAAGCTATTGGCGAGTTCTAGAGACTGAGTTTTCCTaGGCTCTGAATCCTTCGCTGCTCTCAGATGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LSYWRVLETEFS*ALNPSLLSDAP Trigger: GGGAGCATCTGAGAGCAGCGAAGGATTCAGAGCTCAGGAAAACTCAGTCTCTAGAACTCGCCAATAGCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS TCA 72 bp | GATGCCTCTTCTGAAGCTGCTTTCCTGGTGACATTCTaGGGCTCTGTCTTCTTCATTGCTTGCAGATCACAG | + |
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Preference number: 6 (lower is better) Translates to: DASSEAAFLVTF*GSVFFIACRSQ Trigger: CTGTGATCTGCAAGCAATGAAGAAGACAGAGCCTCAGAATGTCACCAGGAAAGCAGCTTCAGAAGAGGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS TCA 72 bp | TGTGAGAATCCCATGGAACCAAGGAGCAATGGTGTCTaGGTTTTTCTGGTAACCTGCACGGAATGGCAACTG | + |
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Preference number: 6 (lower is better) Translates to: CENPMEPRSNGV*VFLVTCTEWQL Trigger: CAGTTGCCATTCCGTGCAGGTTACCAGAAAAACTCAGACACCATTGCTCCTTGGTTCCATGGGATTCTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS CAA 72 bp | TCGTGGTCTTTTTCCTTGACGGGTTTAGTTTGGGCTTaGTCATCCTTCCTGGTTGGTATTGCTCTGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SWSFSLTGLVWA*SSFLVGIALGP Trigger: AGGACCCAGAGCAATACCAACCAGGAAGGATGACAAAGCCCAAACTAAACCCGTCAAGGAAAAAGACCACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS GCA 72 bp | AAAACTTCCCGGCACACCTGTGCTCAGAAGTTCATTTaGTTTCTTCAGTGTGAGAATCCCATGGAACCAAGG | + |
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Preference number: 6 (lower is better) Translates to: KTSRHTCAQKFI*FLQCENPMEPR Trigger: CCTTGGTTCCATGGGATTCTCACACTGAAGAAAGCAAATGAACTTCTGAGCACAGGTGTGCCGGGAAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS CAA 72 bp | TCCTCTGTCTGCTTCATTTCCTCGTGGTCTTTTTCCTaGACGGGTTTAGTTTGGGCTTTGTCATCCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSVCFISSWSFS*TGLVWALSSFL Trigger: CAGGAAGGATGACAAAGCCCAAACTAAACCCGTCAAGGAAAAAGACCACGAGGAAATGAAGCAGACAGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS CCA 72 bp | ATTTCCTCGTGGTCTTTTTCCTTGACGGGTTTAGTTTaGGCTTTGTCATCCTTCCTGGTTGGTATTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ISSWSFSLTGLV*ALSSFLVGIAL Trigger: CAGAGCAATACCAACCAGGAAGGATGACAAAGCCCAAACTAAACCCGTCAAGGAAAAAGACCACGAGGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS CAA 72 bp | CATTTCCTCGTGGTCTTTTTCCTTGACGGGTTTAGTTaGGGCTTTGTCATCCTTCCTGGTTGGTATTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HFLVVFFLDGFS*GFVILPGWYCS Trigger: AGAGCAATACCAACCAGGAAGGATGACAAAGCCCAAACTAAACCCGTCAAGGAAAAAGACCACGAGGAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS CAA 90 bp | GTTTTCTCATCCTCTGTCTGCTTCATTTCCTCGTGGTCTTTTTCCTaGACGGGTTTAGTTTGGGCTTTGTCATCCTTCCTGGTTGGTATT | + |
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Preference number: 6 (lower is better) Translates to: VFSSSVCFISSWSFS*TGLVWALSSFLVGI Trigger: AATACCAACCAGGAAGGATGACAAAGCCCAAACTAAACCCGTCAAGGAAAAAGACCACGAGGAAATGAAGCAGACAGAGGATGAGAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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| CDS TCA 72 bp | GACTTTATTTTTAAGCTATTGGCGAGTTCTAGAGACTaGGTTTTCCTGAGCTCTGAATCCTTCGCTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: DFIFKLLASSRD*VFLSSESFAAL Trigger: GAGAGCAGCGAAGGATTCAGAGCTCAGGAAAACTCAGTCTCTAGAACTCGCCAATAGCTTAAAAATAAAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066594.4 ENSMUST00000212166.2 |
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