Pregenerated sensors for SH2D3C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059013Ensembl transcript IDs: ENSMUST00000074248.11, ENSMUST00000113242.5
Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGAGCCCCTCTaGCGCCGATGCTGCCCGCAGCTGCAGAGAGGCGAGATCTCCGGG | + |
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Preference number: 1 (lower is better) Translates to: HSVPVVLWRECPEPL*RRCCPQLQRGEISG Trigger: CCCGGAGATCTCGCCTCTCTGCAGCTGCGGGCAGCATCGGCGGCAGAGGGGCTCAGGACATTCCCTCCAGAGCACCACAGGGACACTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR CCA 90 bp | AACCCAGAACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTaGAGGGAATGTCCTGAGCCCCTCTGCCGCCGATGCTGCCCGCAG | + |
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Preference number: 1 (lower is better) Translates to: NPEHSWADHSVPVVL*RECPEPLCRRCCPQ Trigger: CTGCGGGCAGCATCGGCGGCAGAGGGGCTCAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTTCTGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR TCA 90 bp | CAGAGTCCATTCAGGACCCTGGAAGTGCAAGGGAGATCCTGGATTTaGACCCAGAACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: QSPFRTLEVQGRSWI*TQNILGLITVSLWC Trigger: GCACCACAGGGACACTGTGATCAGCCCAAGAATGTTCTGGGTTCAAATCCAGGATCTCCCTTGCACTTCCAGGGTCCTGAATGGACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR GCA 90 bp | CTAACCAGGTATTTCCTGGTGTTGTGGACCGTTCACCTGTGGAATTaGTTCTTTCTACCAAGGCCTCATGGGACAGAAGAAAGAGTCATT | + |
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Preference number: 1 (lower is better) Translates to: LTRYFLVLWTVHLWN*FFLPRPHGTEERVI Trigger: AATGACTCTTTCTTCTGTCCCATGAGGCCTTGGTAGAAAGAAGCAATTCCACAGGTGAACGGTCCACAACACCAGGAAATACCTGGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR TCA 90 bp | CAAGGCCTCATGGGACAGAAGAAAGAGTCATTAAAGTTTATTATATaGAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTAT | + |
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Preference number: 1 (lower is better) Translates to: QGLMGQKKESLKFII*KRAWLLYIHLHQTY Trigger: ATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTCATATAATAAACTTTAATGACTCTTTCTTCTGTCCCATGAGGCCTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTCTCTGCCGCCGATGCTaGCCGCAGCTGCAGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLLCRRC*PQLQRG Trigger: GCCTCTCTGCAGCTGCGGGCAGCATCGGCGGCAGAG...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTCCCCTCTGCCGCCGATaGTGCCCGCAGCTGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLPLCRR*CPQLQR Trigger: TCTCTGCAGCTGCGGGCAGCATCGGCGGCAGAGGGG...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR CAA 90 bp | GGGGGCCAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTaGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GGQRKPVGGAEVPVH*EGRLGACVMEEWSS Trigger: TGAGCTCCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTGGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR GCA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGCCCCTCTGCCGCCGATaGTGCCCGCAGCTGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: NILGLITVSLWCSGGNVLPLCRR*CPQLQR Trigger: TCTCTGCAGCTGCGGGCAGCATCGGCGGCAGAGGGG...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR GCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTACAGTGTCCCTGTGGTaGTCTGGAGGGAATGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLTVSLW*SGGNVL Trigger: CAGGACATTCCCTCCAGAGCACCACAGGGACACTGT...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR GCA 90 bp | GGCGGTCAGGGAGGGGCTGCTGTAAACCTGGTTCCCCATATCATCTGGGAAGTCCTAGGCATAGATGCCTaGAGGAAGGAAGAGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GGQGGAAVNLVPHIIWEVLGIDA*RKEEGW Trigger: CCACCCCTCTTCCTTCCTGCAGGCATCTATGCCTAG...GACTTCCCAGATGATATGGGGAACCAGGTTTACAGCAGCCCCTCCCTGACCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTGTCCATTCAGGACCCTaGAAGTGCAAGGGAGATCCT | + |
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Preference number: 2 (lower is better) Translates to: PAQAGGRSRGSCPFGRETVHSGP*KCKGDP Trigger: AGGATCTCCCTTGCACTTCCAGGGTCCTGAATGGAC...AGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTAGAACATTCTTGGGCTaGTCACAGTGTCCCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: PAQAGGRSRGSCPFGRETRTFLG*SQCPCG Trigger: ACCACAGGGACACTGTGATCAGCCCAAGAATGTTCT...AGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR GCA 90 bp | GGCGGTCAGGGAGGGGCTGCTGTAAACCTGGTTCCCCATATCATCTGGGAAGTCACCTCTAGGCATAGATaGCTGCAGGAAGGAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: GGQGGAAVNLVPHIIWEVTSRHR*LQEGRG Trigger: CCCTCTTCCTTCCTGCAGGCATCTATGCCTAGAGGT...GACTTCCCAGATGATATGGGGAACCAGGTTTACAGCAGCCCCTCCCTGACCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGTCCATTCAGGACCCTaGAAGTGCAAGGGAGATCCT | + |
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Preference number: 2 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLVHSGP*KCKGDP Trigger: AGGATCTCCCTTGCACTTCCAGGGTCCTGAATGGAC...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGGAGATCCTGGATTTaGACCCAGAACATTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLGRSWI*TQNILG Trigger: CCCAAGAATGTTCTGGGTTCAAATCCAGGATCTCCC...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR CCA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGATCACAGTGTCCCTGTaGTGCTCTGGAGGGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: EVPVHLEGRLGACVMEEWITVSL*CSGGNV Trigger: GACATTCCCTCCAGAGCACCACAGGGACACTGTGAT...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR CCA 90 bp | ATTTTATTTGTATGGCTATTTTGCTCACACACCGCATGTGTGCCCGGTACCCAAGCCAGCGCAAGCCGGTaGGAGGAGCAGAGGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: ILFVWLFCSHTACVPGTQASASR*EEQRFL Trigger: CAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTGGC...TTGGGTACCGGGCACACATGCGGTGTGTGAGCAAAATAGCCATACAAATAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR-3UTR GCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGCTCTGCCGCCGATGCTaGCCGCAGCTGCAGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: EHGFCTYIYTRLIYSKMELCRRC*PQLQRG Trigger: GCCTCTCTGCAGCTGCGGGCAGCATCGGCGGCAGAG...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR CAA 90 bp | GCTAACCAGGTATTTCCTGGTGTTGTGGACCGTTCACCTGTGGAATaGCTTCTTTCTACCAAGGCCTCATGGGACAGAAGAAAGAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: ANQVFPGVVDRSPVE*LLSTKASWDRRKSH Trigger: ATGACTCTTTCTTCTGTCCCATGAGGCCTTGGTAGAAAGAAGCAATTCCACAGGTGAACGGTCCACAACACCAGGAAATACCTGGTTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR CAA 90 bp | GTGCTGGGATTGAGCCAGAGTCCTCTGAAAGATCACTCAGTGCTCTaGGCCACTAAGCCATCTCTTCTGGTCTCTAGATTTTTAAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: VLGLSQSPLKDHSVL*ATKPSLLVSRFLKA Trigger: GGCTTTTAAAAATCTAGAGACCAGAAGAGATGGCTTAGTGGCCAAGAGCACTGAGTGATCTTTCAGAGGACTCTGGCTCAATCCCAGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR-3UTR GCA 90 bp | AAGATCACTCAGTGCTCTTGGCCACTAAGCCATCTCTTCTGGTCTCTAGATTTTTCAGGACCCTGGAAGTaGAAGGGAGATCCTGGATTT | + |
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Preference number: 2 (lower is better) Translates to: KITQCSWPLSHLFWSLDFSGPWK*KGDPGF Trigger: AAATCCAGGATCTCCCTTGCACTTCCAGGGTCCTGA...AAAATCTAGAGACCAGAAGAGATGGCTTAGTGGCCAAGAGCACTGAGTGATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGGTCCCTGTGGTGCTCTaGAGGGAATGTCCTGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: EREHGFCTYIYTRLIYSKVPVVL*RECPEP Trigger: GGGCTCAGGACATTCCCTCCAGAGCACCACAGGGAC...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGAGTCCCTGTGGTGCTCTaGAGGGAATGTCCTGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: KESMASVHTFTPDLFTVRVPVVL*RECPEP Trigger: GGGCTCAGGACATTCCCTCCAGAGCACCACAGGGAC...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR CCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGGTGGGGAGCCTCCCATaGCTCAAAAACAGGGAACCT | + |
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Preference number: 2 (lower is better) Translates to: EHGFCTYIYTRLIYSKMEVGSLP*LKNREP Trigger: AGGTTCCCTGTTTTTGAGCCATGGGAGGCTCCCCAC...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGGTGGGGAGCCTCCCATaGCTCAAAAACAGGGAACCT | + |
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Preference number: 2 (lower is better) Translates to: EREHGFCTYIYTRLIYSKVGSLP*LKNREP Trigger: AGGTTCCCTGTTTTTGAGCCATGGGAGGCTCCCCAC...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR TCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGGGGAGATCCTGGATTTaGACCCAGAACATTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: EREHGFCTYIYTRLIYSKGRSWI*TQNILG Trigger: CCCAAGAATGTTCTGGGTTCAAATCCAGGATCTCCC...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR TCA 90 bp | TATGAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAGAACATTCTTGGGCTaGTCACAGTGTCCCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: YEREHGFCTYIYTRLIYSRTFLG*SQCPCG Trigger: ACCACAGGGACACTGTGATCAGCCCAAGAATGTTCT...ACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR GCA 90 bp | TATGAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTTCAGGACCCTGGAAGTaGAAGGGAGATCCTGGATTT | + |
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Preference number: 2 (lower is better) Translates to: YEREHGFCTYIYTRLIYSSGPWK*KGDPGF Trigger: AAATCCAGGATCTCCCTTGCACTTCCAGGGTCCTGA...ACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR GCA 72 bp | CTCTGGAGGGAATGTCCTGAGCCCCTCTGCCGCCGATaGTGCCCGCAGCTGCAGAGAGGCGAGATCTCCGGG | + |
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Preference number: 3 (lower is better) Translates to: LWRECPEPLCRR*CPQLQRGEISG Trigger: CCCGGAGATCTCGCCTCTCTGCAGCTGCGGGCAGCATCGGCGGCAGAGGGGCTCAGGACATTCCCTCCAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR GCA 72 bp | AAGATGGAGGCTGTGGCACCTCTAGGCATAGATGCCTaGAGGAAGGAAGAGGGGTGGGGAGCCTCCCATGGC | + |
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Preference number: 3 (lower is better) Translates to: KMEAVAPLGIDA*RKEEGWGASHG Trigger: GCCATGGGAGGCTCCCCACCCCTCTTCCTTCCTGCAGGCATCTATGCCTAGAGGTGCCACAGCCTCCATCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR CCA 72 bp | CATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTaGAGGGAATGTCCTGAGCCCCTCTGCCGCCGATGC | + |
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Preference number: 3 (lower is better) Translates to: HSWADHSVPVVL*RECPEPLCRRC Trigger: GCATCGGCGGCAGAGGGGCTCAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR TCA 72 bp | CACTGCTCTGGACTGACCGTCTCCCCTGCTAATACCTaGGCTCATGGCGGTCAGGGAGGGGCTGCTGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: HCSGLTVSPANT*AHGGQGGAAVN Trigger: GTTTACAGCAGCCCCTCCCTGACCGCCATGAGCTCAGGTATTAGCAGGGGAGACGGTCAGTCCAGAGCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR GCA 72 bp | CAGAACATTCTTGGGCTGATCACAGTGTCCCTGTGGTaGTCTGGAGGGAATGTCCTGAGCCCCTCTGCCGCC | + |
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Preference number: 3 (lower is better) Translates to: QNILGLITVSLW*SGGNVLSPSAA Trigger: GGCGGCAGAGGGGCTCAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR CAA 90 bp | GGCGGTCAGGGAGGGGCTGCTGTAAACCTGGTTCCCCATATCATCTGGGAAGTCAGGTATTTCCTGGTGTaGTGGACCGTTCACCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: GGQGGAAVNLVPHIIWEVRYFLV*WTVHLW Trigger: CCACAGGTGAACGGTCCACAACACCAGGAAATACCT...GACTTCCCAGATGATATGGGGAACCAGGTTTACAGCAGCCCCTCCCTGACCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR TCA 72 bp | GAGAAGACTGAGGCCCCTACTTACACTGCTCTGGACTaGCCGTCTCCCCTGCTAATACCTGAGCTCATGGCG | + |
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Preference number: 3 (lower is better) Translates to: EKTEAPTYTALD*PSPLLIPELMA Trigger: CGCCATGAGCTCAGGTATTAGCAGGGGAGACGGTCAGTCCAGAGCAGTGTAAGTAGGGGCCTCAGTCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR TCA 72 bp | TGGTTTCTCCTGACAAGCCCTGGGCTCAGAGAAGACTaGGGCCCCTACTTACACTGCTCTGGACTGACCGTC | + |
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Preference number: 3 (lower is better) Translates to: WFLLTSPGLRED*GPYLHCSGLTV Trigger: GACGGTCAGTCCAGAGCAGTGTAAGTAGGGGCCTCAGTCTTCTCTGAGCCCAGGGCTTGTCAGGAGAAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR CCA 72 bp | AGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTaGCGCGTGTGTGATGGAAGAATGGAGCTCAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: RSRGSCPFGRET*RVCDGRMELRV Trigger: GACTCTGAGCTCCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR TCA 72 bp | GGAGATCCTGGATTTGAACCCAGAACATTCTTGGGCTaGTCACAGTGTCCCTGTGGTGCTCTGGAGGGAATG | + |
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Preference number: 3 (lower is better) Translates to: GDPGFEPRTFLG*SQCPCGALEGM Trigger: CATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTTCTGGGTTCAAATCCAGGATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR-3UTR CAA 90 bp | CGGTACCCAAGGAGGTCAGAAGAGGGCTTAAGACCCCTTAGCACTGGAGTTCTAGATCACTCAGTGCTCTaGGCCACTAAGCCATCTCTT | + |
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Preference number: 3 (lower is better) Translates to: RYPRRSEEGLRPLSTGVLDHSVL*ATKPSL Trigger: AAGAGATGGCTTAGTGGCCAAGAGCACTGAGTGATC...TAGAACTCCAGTGCTAAGGGGTCTTAAGCCCTCTTCTGACCTCCTTGGGTACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR TCA 72 bp | TTCAGGACCCTGGAAGTGCAAGGGAGATCCTGGATTTaGACCCAGAACATTCTTGGGCTGATCACAGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: FRTLEVQGRSWI*TQNILGLITVS Trigger: GGACACTGTGATCAGCCCAAGAATGTTCTGGGTTCAAATCCAGGATCTCCCTTGCACTTCCAGGGTCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| 3UTR CCA 72 bp | ACCAGGTATTTCCTGGTGTTGTGGACCGTTCACCTGTaGAATTGCTTCTTTCTACCAAGGCCTCATGGGACA | + |
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Preference number: 3 (lower is better) Translates to: TRYFLVLWTVHL*NCFFLPRPHGT Trigger: TGTCCCATGAGGCCTTGGTAGAAAGAAGCAATTCCACAGGTGAACGGTCCACAACACCAGGAAATACCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| 3UTR GCA 72 bp | TATTTCCTGGTGTTGTGGACCGTTCACCTGTGGAATTaGTTCTTTCTACCAAGGCCTCATGGGACAGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: YFLVLWTVHLWN*FFLPRPHGTEE Trigger: TTCTTCTGTCCCATGAGGCCTTGGTAGAAAGAAGCAATTCCACAGGTGAACGGTCCACAACACCAGGAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| CDS-3UTR GCA 90 bp | CCAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTCGTGGTGGGCCACAGTaGGGGCGGCCTCCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PAQAGGRSRGSCPFGRETRGGPQ*GRPPGG Trigger: CCCACCTGGAGGCCGCCCGCACTGTGGCCCACCACG...AGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR TCA 90 bp | GGCGGTCAGGGAGGGGCTGCTGTAAACCTGGTTCCCCATATCATCTGGGAAGTCGGCCATGGGGGAGGGTaGGCAGCTCCATGCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GGQGGAAVNLVPHIIWEVGHGGG*AAPCPS Trigger: GCTGGGGCATGGAGCTGCTCACCCTCCCCCATGGCC...GACTTCCCAGATGATATGGGGAACCAGGTTTACAGCAGCCCCTCCCTGACCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| CDS-3UTR GCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTCCGGGGAGTCTCTCCTaGGGCCTGCTCTCGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLPGSLS*GLLSAA Trigger: GGCAGCCGAGAGCAGGCCGCAGGAGAGACTCCCCGG...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | GGCGGTCAGGGAGGGGCTGCTGTAAACCTGGTTCCCCATATCATCTGGGAAGTCCCGGGGAGTCTCTCCTaGGGCCTGCTCTCGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGQGGAAVNLVPHIIWEVPGSLS*GLLSAA Trigger: GGCAGCCGAGAGCAGGCCGCAGGAGAGACTCCCCGG...GACTTCCCAGATGATATGGGGAACCAGGTTTACAGCAGCCCCTCCCTGACCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | CCAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTGTGAGGGGCCCTGTCTaGCTCCCCAGGAGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAQAGGRSRGSCPFGRETVRGPV*LPRRLW Trigger: CCAAAGCCTCCTGGGGAGTCAGACAGGGCCCCTCAC...AGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTCGTAGCTGCCGGCCATaGGGGAGGGTGAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLRSCRP*GRVSSS Trigger: GGAGCTGCTCACCCTCCCCCATGGCCGGCAGCTACG...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | CCAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTCGGGCGGCCTCCAGGTaGGCTAGCACAACCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PAQAGGRSRGSCPFGRETRAASR*ASTTST Trigger: TGTGGAGGTTGTGCTAGCCCACCTGGAGGCCGCCCG...AGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGTGAGGGGCCCTGTCTaGCTCCCCAGGAGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLVRGPV*LPRRLW Trigger: CCAAAGCCTCCTGGGGAGTCAGACAGGGCCCCTCAC...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | GGCGGTCAGGGAGGGGCTGCTGTAAACCTGGTTCCCCATATCATCTGGGAAGTCTGGGATGGGCTTGCGTaGGGGGCCCTGTCTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGQGGAAVNLVPHIIWEVWDGLA*GALSDS Trigger: GGAGTCAGACAGGGCCCCTCACGCAAGCCCATCCCA...GACTTCCCAGATGATATGGGGAACCAGGTTTACAGCAGCCCCTCCCTGACCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | CCAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTGGCAGTCAACCTTGGTaGCATGCCGGGCCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAQAGGRSRGSCPFGRETGSQPW*HAGPVS Trigger: GGACACTGGCCCGGCATGTCACCAAGGTTGACTGCC...AGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTAGGGGCTGGCTGGGCTaGCAGTCTTGCTGCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLRGWLG*QSCCCP Trigger: AGGGCAGCAGCAAGACTGCCAGCCCAGCCAGCCCCT...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GGCGGTCAGGGAGGGGCTGCTGTAAACCTGGTTCCCCATATCATCTGGGAAGTCAGGGGCTGGCTGGGCTaGCAGTCTTGCTGCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGQGGAAVNLVPHIIWEVRGWLG*QSCCCP Trigger: AGGGCAGCAGCAAGACTGCCAGCCCAGCCAGCCCCT...GACTTCCCAGATGATATGGGGAACCAGGTTTACAGCAGCCCCTCCCTGACCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | CCAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTTTCCAGGACATAGCTaGGGTTCGCTGGAGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PAQAGGRSRGSCPFGRETFPGHS*GSLERR Trigger: CCGCCGCTCCAGCGAACCTCAGCTATGTCCTGGAAA...AGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | GGCGGTCAGGGAGGGGCTGCTGTAAACCTGGTTCCCCATATCATCTGGGAAGTCGGCAGTCAACCTTGGTaGCATGCCGGGCCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGQGGAAVNLVPHIIWEVGSQPW*HAGPVS Trigger: GGACACTGGCCCGGCATGTCACCAAGGTTGACTGCC...GACTTCCCAGATGATATGGGGAACCAGGTTTACAGCAGCCCCTCCCTGACCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCTGGCAGTCTTGCTaGTGCCCTGGCTCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLGWQSC*CPGSGH Trigger: ATGGCCTGAGCCAGGGCAGCAGCAAGACTGCCAGCC...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR GCA 90 bp | GCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAACTTGTGCAGCAGAGCTaGCCGCTCCTCCGCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AEVPVHLEGRLGACVMEELVQQS*PLLRRA Trigger: GGCTCGGCGGAGGAGCGGGCAGCTCTGCTGCACAAG...TTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | CCAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTAGCTGTATGGTCTTGTaGAGCAGAGCTGCCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAQAGGRSRGSCPFGRETSCMVL*SRAARS Trigger: GGAGCGGGCAGCTCTGCTGCACAAGACCATACAGCT...AGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR GCA 90 bp | CCAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTCACCGTGTTCTGTGCTaGCCCAAGGTTCAGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAQAGGRSRGSCPFGRETHRVLC*PKVQDP Trigger: AGGGTCCTGAACCTTGGGGCAGCACAGAACACGGTG...AGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGCTGCTGTTGGCACCCTaGCTGCCCCAGAGGAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EVPVHLEGRLGACVMEEWLLLAP*LPQRSR Trigger: GCGGCTCCTCTGGGGCAGCCAGGGTGCCAACAGCAG...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTTTGAAGTGCAAGGCCTaGTTGTGCCAGCGGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLLKCKA*LCQRHV Trigger: CACGTGCCGCTGGCACAATCAGGCCTTGCACTTCAA...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTAAGTCGCCGTTCCGCTaGACCAGAGTCTCAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLKSPFR*TRVSET Trigger: GGTCTCTGAGACTCTGGTGCAGCGGAACGGCGACTT...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR GCA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGCTGGGCTGGCAGTCTTaGTGCTGCCCTGGCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NILGLITVSLWCSGGNVLLGWQS*CCPGSG Trigger: GCCTGAGCCAGGGCAGCAGCAAGACTGCCAGCCCAG...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | CGGTACCCAAGGAGGTCAGAAGAGGGCTTAAGACCCCTTAGCACTGGAGTTCTACTGGGCTGGCAGTCTTaGTGCTGCCCTGGCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RYPRRSEEGLRPLSTGVLLGWQS*CCPGSG Trigger: GCCTGAGCCAGGGCAGCAGCAAGACTGCCAGCCCAG...TAGAACTCCAGTGCTAAGGGGTCTTAAGCCCTCTTCTGACCTCCTTGGGTACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| CDS-3UTR CCA 90 bp | CCAGAACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTTGGAGCCTGAGGGGCTaGCTGGGCTGGCAGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PEHSWADHSVPVVLWRECWSLRG*LGWQSC Trigger: GCAAGACTGCCAGCCCAGCCAGCCCCTCAGGCTCCA...ACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR CCA 90 bp | GCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGAGCCTGAGGGGCTaGCTGGGCTGGCAGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AEVPVHLEGRLGACVMEEWSLRG*LGWQSC Trigger: GCAAGACTGCCAGCCCAGCCAGCCCCTCAGGCTCCA...TTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR CCA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGGCAGAGGGTGTGGGATaGGCTTGCGTGAGGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EVPVHLEGRLGACVMEEWAEGVG*ACVRGP Trigger: AGGGCCCCTCACGCAAGCCCATCCCACACCCTCTGC...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR TCA 90 bp | CGGTACCCAAGGAGGTCAGAAGAGGGCTTAAGACCCCTTAGCACTGGAGTTCTATGTGCCAGCGGCACGTaGGCACATAGTCCCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RYPRRSEEGLRPLSTGVLCASGT*AHSPLG Trigger: GCCTAGGGGACTATGTGCTCACGTGCCGCTGGCACA...TAGAACTCCAGTGCTAAGGGGTCTTAAGCCCTCTTCTGACCTCCTTGGGTACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | CCAGAACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTGGCTGGCAGTCTTGCTaGTGCCCTGGCTCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PEHSWADHSVPVVLWRECGWQSC*CPGSGH Trigger: ATGGCCTGAGCCAGGGCAGCAGCAAGACTGCCAGCC...ACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR GCA 90 bp | GCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAAGCCTCTTCATGTGGCTaGCCTTGGAGCCTGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AEVPVHLEGRLGACVMEEASSCG*PWSLRG Trigger: GCCCCTCAGGCTCCAAGGGCAGCCACATGAAGAGGC...TTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR GCA 90 bp | CTTATTTACAGTAAGATGGAGGCTGTGGCACCTCTAGGCATAGATGCCTGCAGGAGCGCCAGGCCTGGCTaGTGTTGGCACCCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LIYSKMEAVAPLGIDACRSARPG*CWHPGC Trigger: GCAGCCAGGGTGCCAACAGCAGCCAGGCCTGGCGCT...CCTGCAGGCATCTATGCCTAGAGGTGCCACAGCCTCCATCTTACTGTAAATAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAAACGAGGGCAGGCACGTaGTCGAAGCTCTCCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AEVPVHLEGRLGACVMEETRAGT*SKLSCS Trigger: CGAGCAGGAGAGCTTCGACCACGTGCCTGCCCTCGT...TTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR CCA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGGGCTCAGGCCATAGCTaGCCTCGAGGTAGCGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVPVHLEGRLGACVMEEWGSGHS*PRGSAV Trigger: CACTGCGCTACCTCGAGGCCAGCTATGGCCTGAGCC...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGGGCTCAGGCCATAGCTaGCCTCGAGGTAGCGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NILGLITVSLWCSGGNVLGSGHS*PRGSAV Trigger: CACTGCGCTACCTCGAGGCCAGCTATGGCCTGAGCC...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | CTTATTTACAGTAAGATGGAGGCTGTGGCACCTCTAGGCATAGATGCCTGCAGGCGTAGCTGCCGGCCATaGGGGAGGGTGAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIYSKMEAVAPLGIDACRRSCRP*GRVSSS Trigger: GGAGCTGCTCACCCTCCCCCATGGCCGGCAGCTACG...CCTGCAGGCATCTATGCCTAGAGGTGCCACAGCCTCCATCTTACTGTAAATAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| 3UTR CAA 72 bp | CGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTaGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKPVGGAEVPVH*EGRLGACVMEE Trigger: TTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGCAGACAGCAGCTCCTTaGCCTTGCGCAGAAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVPVHLEGRLGACVMEEWQTAAP*PCAEGP Trigger: TGGCCCTTCTGCGCAAGGTCAAGGAGCTGCTGTCTG...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTTCTGGAACTCTGTGCTaGATACTTCCAGGAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLSGTLC*ILPGAP Trigger: CGGAGCTCCTGGAAGTATTCAGCACAGAGTTCCAGA...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTTCTTCCAGCTCCTTGTaGAGTTTCTCTGGCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLSSSSL*SFSGEE Trigger: CTCCTCGCCAGAGAAACTGCACAAGGAGCTGGAAGA...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGTGGCAGTCTTGCTGCTaGCCTGGCTCAGGCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: NILGLITVSLWCSGGNVLWQSCC*PGSGHS Trigger: GCTATGGCCTGAGCCAGGGCAGCAGCAAGACTGCCA...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGCCCAGGATATCCACTaGCAGCATGATGGACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLAQDIH*QHDGHG Trigger: ACCATGTCCATCATGCTGGCAGTGGATATCCTGGGC...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAACTCGAGGTAGCGCAGTaGGAAGGTGCGGTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEVPVHLEGRLGACVMEELEVAQ*EGAVDR Trigger: CCTGTCAACCGCACCTTCCCACTGCGCTACCTCGAG...TTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGGTAATGAGGTGCTGTTaGGGCAGCCATCGCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NILGLITVSLWCSGGNVLVMRCC*GSHRCG Trigger: CCCGCAGCGATGGCTGCCCCAACAGCACCTCATTAC...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGGGTCACTGTAGCTGCTaGGTGATGGTGATGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVPVHLEGRLGACVMEEWGHCSC*VMVMAR Trigger: CCTCGCCATCACCATCACTCAGCAGCTACAGTGACC...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGCTACTACAGGGACTGTaGAGGTCTTGCCCCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NILGLITVSLWCSGGNVLLLQGL*RSCPTP Trigger: GGGAGTGGGGCAAGACCTTCACAGTCCCTGTAGTAG...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGCTTCGAGAAACCAGGTaGGACTCTCGGCTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVPVHLEGRLGACVMEEWLRETR*DSRLTS Trigger: GGAGGTCAGCCGAGAGTCGCACCTGGTTTCTCGAAG...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR GCA 90 bp | GGCGGTCAGGGAGGGGCTGCTGTAAACCTGGTTCCCCATATCATCTGGGAAGTCAGGGTCATCCATGTCTaGTCCAGCCTTGAAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGQGGAAVNLVPHIIWEVRVIHV*SSLEIW Trigger: CCAGATTTCAAGGCTGGAGCAGACATGGATGACCCT...GACTTCCCAGATGATATGGGGAACCAGGTTTACAGCAGCCCCTCCCTGACCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGTCCTTGGGGATCAGCTaGGACTGGAAGGTAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVPVHLEGRLGACVMEEWSLGIS*DWKVAR Trigger: CCTGGCTACCTTCCAGTCCCAGCTGATCCCCAAGGA...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | CCAGAACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTGGTGTTGCTCAGCGGTaGGCCTTCTTTGCCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PEHSWADHSVPVVLWRECGVAQR*AFFALV Trigger: AACGAGGGCAAAGAAGGCCCACCGCTGAGCAACACC...ACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | CCAGAACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTGTACGTGTGGAAACGTaGTGTTGCTCAGCGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PEHSWADHSVPVVLWRECVRVET*CCSAVG Trigger: GCCCACCGCTGAGCAACACCACGTTTCCACACGTAC...ACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | CGGTACCCAAGGAGGTCAGAAGAGGGCTTAAGACCCCTTAGCACTGGAGTTCTATGTCTGCTCCAGCCTTaGAATCTGGGCCATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RYPRRSEEGLRPLSTGVLCLLQP*NLGHLQ Trigger: CTGGAGATGGCCCAGATTTCAAGGCTGGAGCAGACA...TAGAACTCCAGTGCTAAGGGGTCTTAAGCCCTCTTCTGACCTCCTTGGGTACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | ATTTTATTTGTATGGCTATTTTGCTCACACACCGCATGTGTGCCCGGTACCCAACTTGTGCAGCAGAGCTaGCCGCTCCTCCGCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILFVWLFCSHTACVPGTQLVQQS*PLLRRA Trigger: GGCTCGGCGGAGGAGCGGGCAGCTCTGCTGCACAAG...TTGGGTACCGGGCACACATGCGGTGTGTGAGCAAAATAGCCATACAAATAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGAGATCTGGGATCTaGTCCATGCTGAGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AEVPVHLEGRLGACVMEEWRSGI*SMLRAQ Trigger: CTGTGCCCTCAGCATGGACCAGATCCCAGATCTCCA...TTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | CTTATTTACAGTAAGATGGAGGCTGTGGCACCTCTAGGCATAGATGCCTGCAGGCTACTACAGGGACTGTaGAGGTCTTGCCCCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LIYSKMEAVAPLGIDACRLLQGL*RSCPTP Trigger: GGGAGTGGGGCAAGACCTTCACAGTCCCTGTAGTAG...CCTGCAGGCATCTATGCCTAGAGGTGCCACAGCCTCCATCTTACTGTAAATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGTATCCACTGCCAGCATaGTGGACATGGTGTGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: EVPVHLEGRLGACVMEEWYPLPA*WTWCGT Trigger: GGTTCCACACCATGTCCATCATGCTGGCAGTGGATA...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATATCCACTGCCAGCATaGTGGACATGGTGTGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: AEVPVHLEGRLGACVMEEYPLPA*WTWCGT Trigger: GGTTCCACACCATGTCCATCATGCTGGCAGTGGATA...TTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGACTCCCATTAGGGTCTaGATCTCCTTGGTAACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NILGLITVSLWCSGGNVLTPIRV*ISLVTP Trigger: GGGCGTTACCAAGGAGATGCAGACCCTAATGGGAGT...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | CCAGAACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTGCCCAGGATATCCACTaGCAGCATGATGGACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PEHSWADHSVPVVLWRECAQDIH*QHDGHG Trigger: ACCATGTCCATCATGCTGGCAGTGGATATCCTGGGC...ACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGCGTGGTGGGCCACAGTaGGGGCGGCCTCCAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMERGGPQ*GRPPGG Trigger: CCCACCTGGAGGCCGCCCGCACTGTGGCCCACCACG...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGGGCCATGGGGGAGGGTaGGCAGCTCCATGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMEGHGGG*AAPCPS Trigger: GCTGGGGCATGGAGCTGCTCACCCTCCCCCATGGCC...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | CTTATTTACAGTAAGATGGAGGCTGTGGCACCTCTAGGCATAGATGCCTGCAGGTGTCTGCTCCAGCCTTaGAATCTGGGCCATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIYSKMEAVAPLGIDACRCLLQP*NLGHLQ Trigger: CTGGAGATGGCCCAGATTTCAAGGCTGGAGCAGACA...CCTGCAGGCATCTATGCCTAGAGGTGCCACAGCCTCCATCTTACTGTAAATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAAACATCCCCAGGGACTTaGTCCTTCTCTGTGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: AEVPVHLEGRLGACVMEETSPGT*SFSVST Trigger: AGTAGACACAGAGAAGGAGCAAGTCCCTGGGGATGT...TTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR GCA 90 bp | ATTTTATTTGTATGGCTATTTTGCTCACACACCGCATGTGTGCCCGGTACCCAAAGGTCTAGTCGTAGCTaGCGGCCATGGGGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILFVWLFCSHTACVPGTQRSSRS*RPWGRV Trigger: CACCCTCCCCCATGGCCGGCAGCTACGACTAGACCT...TTGGGTACCGGGCACACATGCGGTGTGTGAGCAAAATAGCCATACAAATAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | CTTATTTACAGTAAGATGGAGGCTGTGGCACCTCTAGGCATAGATGCCTGCAGGGTGGAAACGTGGTGTTaGTCAGCGGTGGGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIYSKMEAVAPLGIDACRVETWC*SAVGLL Trigger: AAGAAGGCCCACCGCTGAGCAACACCACGTTTCCAC...CCTGCAGGCATCTATGCCTAGAGGTGCCACAGCCTCCATCTTACTGTAAATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGATGGAGTCTCGAGGATaGGGTAATGAGGTGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVPVHLEGRLGACVMEEWMESRG*GNEVLL Trigger: CAACAGCACCTCATTACCCCATCCTCGAGACTCCAT...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | AAGATCACTCAGTGCTCTTGGCCACTAAGCCATCTCTTCTGGTCTCTAGATTTTTTTCCAGGACATAGCTaGGGTTCGCTGGAGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KITQCSWPLSHLFWSLDFFPGHS*GSLERR Trigger: CCGCCGCTCCAGCGAACCTCAGCTATGTCCTGGAAA...AAAATCTAGAGACCAGAAGAGATGGCTTAGTGGCCAAGAGCACTGAGTGATCTT 51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | AAGATCACTCAGTGCTCTTGGCCACTAAGCCATCTCTTCTGGTCTCTAGATTTTTCAACCTTGGTGACATaGCGGGCCAGTGTCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KITQCSWPLSHLFWSLDFSTLVT*RASVRA Trigger: TGCCCGGACACTGGCCCGGCATGTCACCAAGGTTGA...AAAATCTAGAGACCAGAAGAGATGGCTTAGTGGCCAAGAGCACTGAGTGATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | ATTTTATTTGTATGGCTATTTTGCTCACACACCGCATGTGTGCCCGGTACCCAACTCGAGGTAGCGCAGTaGGAAGGTGCGGTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILFVWLFCSHTACVPGTQLEVAQ*EGAVDR Trigger: CCTGTCAACCGCACCTTCCCACTGCGCTACCTCGAG...TTGGGTACCGGGCACACATGCGGTGTGTGAGCAAAATAGCCATACAAATAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | AAGATCACTCAGTGCTCTTGGCCACTAAGCCATCTCTTCTGGTCTCTAGATTTTCGGCCGCCAGCTGTATaGTCTTGTGCAGCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KITQCSWPLSHLFWSLDFRPPAV*SCAAEL Trigger: CAGCTCTGCTGCACAAGACCATACAGCTGGCGGCCG...AAAATCTAGAGACCAGAAGAGATGGCTTAGTGGCCAAGAGCACTGAGTGATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | CTTATTTACAGTAAGATGGAGGCTGTGGCACCTCTAGGCATAGATGCCTGCAGGTCTTCTCGTACAGAATaGCACCCTCCGTGTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIYSKMEAVAPLGIDACRSSRTE*HPPCVA Trigger: AGCGACACACGGAGGGTGCCATTCTGTACGAGAAGA...CCTGCAGGCATCTATGCCTAGAGGTGCCACAGCCTCCATCTTACTGTAAATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAAGAAAGGAAGTACGTGTaGAAACGTGGTGTTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AEVPVHLEGRLGACVMEEERKYV*KRGVAQ Trigger: CTGAGCAACACCACGTTTCCACACGTACTTCCTTTC...TTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | AAGATCACTCAGTGCTCTTGGCCACTAAGCCATCTCTTCTGGTCTCTAGATTTTGGATCTGGTCCATGCTaGGGGCACAGTTTCGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: KITQCSWPLSHLFWSLDFGSGPC*GHSFGW Trigger: CCATCCGAAACTGTGCCCTCAGCATGGACCAGATCC...AAAATCTAGAGACCAGAAGAGATGGCTTAGTGGCCAAGAGCACTGAGTGATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGTGGGATGGGCTTGCGTaGGGGGCCCTGTCTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMEWDGLA*GALSDS Trigger: GGAGTCAGACAGGGCCCCTCACGCAAGCCCATCCCA...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGCTTGTGCAGTTTCTCTaGCGAGGAGTCAAGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: EVPVHLEGRLGACVMEEWLVQFL*RGVKNV Trigger: TACATTCTTGACTCCTCGCCAGAGAAACTGCACAAG...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | ATTTTATTTGTATGGCTATTTTGCTCACACACCGCATGTGTGCCCGGTACCCAAGGTGTTGCTCAGCGGTaGGCCTTCTTTGCCCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILFVWLFCSHTACVPGTQGVAQR*AFFALV Trigger: AACGAGGGCAAAGAAGGCCCACCGCTGAGCAACACC...TTGGGTACCGGGCACACATGCGGTGTGTGAGCAAAATAGCCATACAAATAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGCGGGCGGCCTCCAGGTaGGCTAGCACAACCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMERAASR*ASTTST Trigger: TGTGGAGGTTGTGCTAGCCCACCTGGAGGCCGCCCG...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGCCTCCGCCGAGCCTGTaGAGCCCAGGATATCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMEPPPSL*SPGYPL Trigger: CAGTGGATATCCTGGGCTGCACAGGCTCGGCGGAGG...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | TATGAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAGCGCCAGGCCTGGCTaGTGTTGGCACCCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YEREHGFCTYIYTRLIYSSARPG*CWHPGC Trigger: GCAGCCAGGGTGCCAACAGCAGCCAGGCCTGGCGCT...ACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | CTTATTTACAGTAAGATGGAGGCTGTGGCACCTCTAGGCATAGATGCCTGCAGGGGCATGGTACCCATGTaGCTGTACATGTCACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LIYSKMEAVAPLGIDACRGMVPM*LYMSLE Trigger: TTCTAGTGACATGTACAGCCACATGGGTACCATGCC...CCTGCAGGCATCTATGCCTAGAGGTGCCACAGCCTCCATCTTACTGTAAATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR CCA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGGAATGTACTTCTCCTTaGAGAACTTCACATAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EVPVHLEGRLGACVMEEWECTSP*RTSHSP Trigger: GGGACTATGTGAAGTTCTCCAAGGAGAAGTACATTC...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGTCATGTGGCTGCCCTTaGAGCCTGAGGGGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMESCGCP*SLRGWL Trigger: CAGCCAGCCCCTCAGGCTCCAAGGGCAGCCACATGA...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | CTTATTTACAGTAAGATGGAGGCTGTGGCACCTCTAGGCATAGATGCCTGCAGGATGATGGACATGGTGTaGAACCTTTCCAGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIYSKMEAVAPLGIDACRMMDMV*NLSSRS Trigger: AGACCTGCTGGAAAGGTTCCACACCATGTCCATCAT...CCTGCAGGCATCTATGCCTAGAGGTGCCACAGCCTCCATCTTACTGTAAATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGACTGCTGTTGGCACCCTaGCTGCCCCAGAGGAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KESMASVHTFTPDLFTVRLLLAP*LPQRSR Trigger: GCGGCTCCTCTGGGGCAGCCAGGGTGCCAACAGCAG...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| 3UTR CAA 72 bp | GTATTTCCTGGTGTTGTGGACCGTTCACCTGTGGAATaGCTTCTTTCTACCAAGGCCTCATGGGACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFPGVVDRSPVE*LLSTKASWDRR Trigger: TCTTCTGTCCCATGAGGCCTTGGTAGAAAGAAGCAATTCCACAGGTGAACGGTCCACAACACCAGGAAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| 3UTR CAA 72 bp | GGGAAGTCTTTGGCGCTAACCAGGTATTTCCTGGTGTaGTGGACCGTTCACCTGTGGAATTGCTTCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GKSLALTRYFLV*WTVHLWNCFFL Trigger: TAGAAAGAAGCAATTCCACAGGTGAACGGTCCACAACACCAGGAAATACCTGGTTAGCGCCAAAGACTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | TATGAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTGGTGCGACTCTCGGCTaGCCTCCTGGGCCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YEREHGFCTYIYTRLIYSGATLG*PPGPSG Trigger: TCCAGAAGGCCCAGGAGGTCAGCCGAGAGTCGCACC...ACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR GCA 90 bp | ATTTTATTTGTATGGCTATTTTGCTCACACACCGCATGTGTGCCCGGTACCCAATCTTCCAGCTCCTTGTaGAGTTTCTCTGGCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILFVWLFCSHTACVPGTQSSSSL*SFSGEE Trigger: CTCCTCGCCAGAGAAACTGCACAAGGAGCTGGAAGA...TTGGGTACCGGGCACACATGCGGTGTGTGAGCAAAATAGCCATACAAATAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGTCAACCTTGGTGACATaGCGGGCCAGTGTCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMESTLVT*RASVRA Trigger: TGCCCGGACACTGGCCCGGCATGTCACCAAGGTTGA...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | AAGATCACTCAGTGCTCTTGGCCACTAAGCCATCTCTTCTGGTCTCTAGATTTTACTCCCATTAGGGTCTaGATCTCCTTGGTAACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KITQCSWPLSHLFWSLDFTPIRV*ISLVTP Trigger: GGGCGTTACCAAGGAGATGCAGACCCTAATGGGAGT...AAAATCTAGAGACCAGAAGAGATGGCTTAGTGGCCAAGAGCACTGAGTGATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGAGGACCGCGGGAGATTaGAAAGGCTCCCAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMERTAGD*KGSQGP Trigger: AGGGCCTTGGGAGCCTTTCCAATCTCCCGCGGTCCT...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGACGAGGGCAGGCACGTaGTCGAAGCTCTCCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EREHGFCTYIYTRLIYSKTRAGT*SKLSCS Trigger: CGAGCAGGAGAGCTTCGACCACGTGCCTGCCCTCGT...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGTCATGTGGCTGCCCTTaGAGCCTGAGGGGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EREHGFCTYIYTRLIYSKSCGCP*SLRGWL Trigger: CAGCCAGCCCCTCAGGCTCCAAGGGCAGCCACATGA...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGAGCAGAGGGTGTGGGATaGGCTTGCGTGAGGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KESMASVHTFTPDLFTVRAEGVG*ACVRGP Trigger: AGGGCCCCTCACGCAAGCCCATCCCACACCCTCTGC...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | ATTTTATTTGTATGGCTATTTTGCTCACACACCGCATGTGTGCCCGGTACCCAATCTTCTCGTACAGAATaGCACCCTCCGTGTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILFVWLFCSHTACVPGTQSSRTE*HPPCVA Trigger: AGCGACACACGGAGGGTGCCATTCTGTACGAGAAGA...TTGGGTACCGGGCACACATGCGGTGTGTGAGCAAAATAGCCATACAAATAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | TATGAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTTGTGCCAGCGGCACGTaGGCACATAGTCCCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YEREHGFCTYIYTRLIYSCASGT*AHSPLG Trigger: GCCTAGGGGACTATGTGCTCACGTGCCGCTGGCACA...ACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | TATGAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAGGTCTAGTCGTAGCTaGCGGCCATGGGGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YEREHGFCTYIYTRLIYSRSSRS*RPWGRV Trigger: CACCCTCCCCCATGGCCGGCAGCTACGACTAGACCT...ACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGACCTCCGCCGAGCCTGTaGAGCCCAGGATATCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KESMASVHTFTPDLFTVRPPPSL*SPGYPL Trigger: CAGTGGATATCCTGGGCTGCACAGGCTCGGCGGAGG...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGAGCTGTATGGTCTTGTaGAGCAGAGCTGCCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMESCMVL*SRAARS Trigger: GGAGCGGGCAGCTCTGCTGCACAAGACCATACAGCT...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGTCTCGGCTGACCTCCTaGGCCTTCTGGACAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EREHGFCTYIYTRLIYSKSRLTS*AFWTAC Trigger: ACAGGCTGTCCAGAAGGCCCAGGAGGTCAGCCGAGA...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGGTAATGAGGTGCTGTTaGGGCAGCCATCGCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EREHGFCTYIYTRLIYSKVMRCC*GSHRCG Trigger: CCCGCAGCGATGGCTGCCCCAACAGCACCTCATTAC...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGCGGCCGCCAGCTGTATaGTCTTGTGCAGCAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EREHGFCTYIYTRLIYSKRPPAV*SCAAEL Trigger: CAGCTCTGCTGCACAAGACCATACAGCTGGCGGCCG...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| 3UTR CAA 72 bp | TTGAGCCAGAGTCCTCTGAAAGATCACTCAGTGCTCTaGGCCACTAAGCCATCTCTTCTGGTCTCTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LSQSPLKDHSVL*ATKPSLLVSRF Trigger: AAATCTAGAGACCAGAAGAGATGGCTTAGTGGCCAAGAGCACTGAGTGATCTTTCAGAGGACTCTGGCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGGGATCTGGTCCATGCTaGGGGCACAGTTTCGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: EREHGFCTYIYTRLIYSKGSGPC*GHSFGW Trigger: CCATCCGAAACTGTGCCCTCAGCATGGACCAGATCC...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR TCA 90 bp | TATGAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTCAGACAGCAGCTCCTTaGCCTTGCGCAGAAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YEREHGFCTYIYTRLIYSQTAAP*PCAEGP Trigger: TGGCCCTTCTGCGCAAGGTCAAGGAGCTGCTGTCTG...ACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGCAGTCTTGCTGCTaGCCTGGCTCAGGCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: KESMASVHTFTPDLFTVRWQSCC*PGSGHS Trigger: GCTATGGCCTGAGCCAGGGCAGCAGCAAGACTGCCA...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGGATGGGGTAATGAGGTaGTGTTGGGGCAGCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: EREHGFCTYIYTRLIYSKDGVMR*CWGSHR Trigger: GCGATGGCTGCCCCAACAGCACCTCATTACCCCATC...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR GCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGGTGGAAACGTGGTGTTaGTCAGCGGTGGGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMEVETWC*SAVGLL Trigger: AAGAAGGCCCACCGCTGAGCAACACCACGTTTCCAC...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGTGGAGATCTGGGATCTaGTCCATGCTGAGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMEWRSGI*SMLRAQ Trigger: CTGTGCCCTCAGCATGGACCAGATCCCAGATCTCCA...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR CCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGGGAGACAGGGGTGAGTaGAGATCTGGGATCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EREHGFCTYIYTRLIYSKGDRGE*RSGIWS Trigger: GGACCAGATCCCAGATCTCCACTCACCCCTGTCTCC...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGTCCTTGGGGATCAGCTaGGACTGGAAGGTAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EREHGFCTYIYTRLIYSKSLGIS*DWKVAR Trigger: CCTGGCTACCTTCCAGTCCCAGCTGATCCCCAAGGA...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR CCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGGCAGGTTCCAGCTTGTaGGACAAGGCAGTGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMEAGSSL*DKAVRT Trigger: AGTCCTCACTGCCTTGTCCCACAAGCTGGAACCTGC...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR GCA 90 bp | TATGAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTCACCGTGTTCTGTGCTaGCCCAAGGTTCAGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: YEREHGFCTYIYTRLIYSHRVLC*PKVQDP Trigger: AGGGTCCTGAACCTTGGGGCAGCACAGAACACGGTG...ACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CCA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGAGGAGACAGGGGTGAGTaGAGATCTGGGATCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KESMASVHTFTPDLFTVRGDRGE*RSGIWS Trigger: GGACCAGATCCCAGATCTCCACTCACCCCTGTCTCC...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR GCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGAGGGTCATCCATGTCTaGTCCAGCCTTGAAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMERVIHV*SSLEIW Trigger: CCAGATTTCAAGGCTGGAGCAGACATGGATGACCCT...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR CCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGGGCAGGAGGACTCTTTaGGAGTGTCACCATGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: EREHGFCTYIYTRLIYSKGRRTL*ECHHVI Trigger: GATGACATGGTGACACTCCCAAAGAGTCCTCCTGCC...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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| CDS-3UTR TCA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGGATACTAGCAGAGGCTaGAGACCGTCTCAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EHGFCTYIYTRLIYSKMEDTSRG*RPSQRK Trigger: TTTTCTCTGAGACGGTCTTCAGCCTCTGCTAGTATC...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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| CDS-3UTR TCA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATCTGGAACTCTGTGCTaGATACTTCCAGGAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KESMASVHTFTPDLFTVRSGTLC*ILPGAP Trigger: CGGAGCTCCTGGAAGTATTCAGCACAGAGTTCCAGA...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR CCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGCCATGTCATCCTGTGTaGCTTCAAAGGTGTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EREHGFCTYIYTRLIYSKPCHPV*LQRCQA Trigger: AGCCTGACACCTTTGAAGCCACACAGGATGACATGG...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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| CDS-3UTR CCA 90 bp | TATGAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTATGGAGTCTCGAGGATaGGGTAATGAGGTGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YEREHGFCTYIYTRLIYSMESRG*GNEVLL Trigger: CAACAGCACCTCATTACCCCATCCTCGAGACTCCAT...ACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR CCA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGATGGACATGGTGTaGAACCTTTCCAGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EREHGFCTYIYTRLIYSKMMDMV*NLSSRS Trigger: AGACCTGCTGGAAAGGTTCCACACCATGTCCATCAT...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR TCA 90 bp | TATGAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTACAGCCTGTTGTTTCTaGGCCTTCTTGATGTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YEREHGFCTYIYTRLIYSTACCF*AFLMLG Trigger: CCCTAACATCAAGAAGGCTCAGAAACAACAGGCTGT...ACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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| CDS-3UTR CCA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGAGAAAGGAAGTACGTGTaGAAACGTGGTGTTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KESMASVHTFTPDLFTVRERKYV*KRGVAQ Trigger: CTGAGCAACACCACGTTTCCACACGTACTTCCTTTC...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR CCA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGACTTGTGCAGTTTCTCTaGCGAGGAGTCAAGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KESMASVHTFTPDLFTVRLVQFL*RGVKNV Trigger: TACATTCTTGACTCCTCGCCAGAGAAACTGCACAAG...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR CCA 90 bp | TATGAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTGAATGTACTTCTCCTTaGAGAACTTCACATAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YEREHGFCTYIYTRLIYSECTSP*RTSHSP Trigger: GGGACTATGTGAAGTTCTCCAAGGAGAAGTACATTC...ACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS GCA 90 bp | TTGCCCATCGTCCCCCGCAGCTCGGCCGCCAGCTGTATGGTCTTGTaGAGCAGAGCTGCCCGCTCCTCCGCCGAGCCTGTGCAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPIVPRSSAASCMVL*SRAARSSAEPVQPR Trigger: CCTGGGCTGCACAGGCTCGGCGGAGGAGCGGGCAGCTCTGCTGCACAAGACCATACAGCTGGCGGCCGAGCTGCGGGGGACGATGGGCAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS GCA 90 bp | CCCCCGCAGCTCGGCCGCCAGCTGTATGGTCTTGTGCAGCAGAGCTaGCCGCTCCTCCGCCGAGCCTGTGCAGCCCAGGATATCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPQLGRQLYGLVQQS*PLLRRACAAQDIHC Trigger: GCAGTGGATATCCTGGGCTGCACAGGCTCGGCGGAGGAGCGGGCAGCTCTGCTGCACAAGACCATACAGCTGGCGGCCGAGCTGCGGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS GCA 90 bp | GGGCGGCCTCCAGGTGGGCTAGCACAACCTCCACACCGTGTTCTGTaGTGCCCCAAGGTTCAGGACCCTCGGCGGGGGCAGAGTCACATT | + |
|
Preference number: 5 (lower is better) Translates to: GRPPGGLAQPPHRVL*CPKVQDPRRGQSHI Trigger: AATGTGACTCTGCCCCCGCCGAGGGTCCTGAACCTTGGGGCAGCACAGAACACGGTGTGGAGGTTGTGCTAGCCCACCTGGAGGCCGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS GCA 90 bp | CGGCCTCCAGGTGGGCTAGCACAACCTCCACACCGTGTTCTGTGCTaGCCCAAGGTTCAGGACCCTCGGCGGGGGCAGAGTCACATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RPPGGLAQPPHRVLC*PKVQDPRRGQSHIP Trigger: TGGAATGTGACTCTGCCCCCGCCGAGGGTCCTGAACCTTGGGGCAGCACAGAACACGGTGTGGAGGTTGTGCTAGCCCACCTGGAGGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CCA 90 bp | GCTGCTGCCCTGGCTCAGGCCATAGCTGGCCTCGAGGTAGCGCAGTaGGAAGGTGCGGTTGACAGGGCAGTAGATGATAGCCCCGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AAALAQAIAGLEVAQ*EGAVDRAVDDSPAL Trigger: CAGAGCGGGGCTATCATCTACTGCCCTGTCAACCGCACCTTCCCACTGCGCTACCTCGAGGCCAGCTATGGCCTGAGCCAGGGCAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CCA 90 bp | GCCTGGCTGCTGTTGGCACCCTGGCTGCCCCAGAGGAGCCGCATCTaGAACTCTGTGCTGAATACTTCCAGGAGCTCCGGTCGGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AWLLLAPWLPQRSRI*NSVLNTSRSSGRAW Trigger: CCAAGCCCGACCGGAGCTCCTGGAAGTATTCAGCACAGAGTTCCAGATGCGGCTCCTCTGGGGCAGCCAGGGTGCCAACAGCAGCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS TCA 90 bp | CTGAGGTTCGCTGGAGCGGCGGGCAACTGGGGAGGCAGGCTGTGCTaGAGTAGAGGGGGTGGCAGAAGGAGCATGGACTCGGGTTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRFAGAAGNWGGRLC*SRGGGRRSMDSGYS Trigger: ACTGTAACCCGAGTCCATGCTCCTTCTGCCACCCCCTCTACTTCAGCACAGCCTGCCTCCCCAGTTGCCCGCCGCTCCAGCGAACCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS TCA 90 bp | CTCCGTGTGTCGCTGTCGCAGGGTCATCCATGTCTGCTCCAGCCTTaGAATCTGGGCCATCTCCAGGGCGCCCATGACAGCGGCGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRVSLSQGHPCLLQP*NLGHLQGAHDSGEA Trigger: AGCTTCGCCGCTGTCATGGGCGCCCTGGAGATGGCCCAGATTTCAAGGCTGGAGCAGACATGGATGACCCTGCGACAGCGACACACGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS TCA 90 bp | TGGCACCCTGGCTGCCCCAGAGGAGCCGCATCTGGAACTCTGTGCTaGATACTTCCAGGAGCTCCGGTCGGGCTTGGAACCCTTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WHPGCPRGAASGTLC*ILPGAPVGLGTLAA Trigger: AGCTGCAAGGGTTCCAAGCCCGACCGGAGCTCCTGGAAGTATTCAGCACAGAGTTCCAGATGCGGCTCCTCTGGGGCAGCCAGGGTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS TCA 90 bp | GCTGGAGCTGACAGTAGTGACCAGAGTCCGGGTCACTGTAGCTGCTaGGTGATGGTGATGGCGAGGCCTTGCAGAGGGTGTGGGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGADSSDQSPGHCSC*VMVMARPCRGCGMG Trigger: GCCCATCCCACACCCTCTGCAAGGCCTCGCCATCACCATCACTCAGCAGCTACAGTGACCCGGACTCTGGTCACTACTGTCAGCTCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS GCA 90 bp | GCTGCCTCTAAGTCTGGTGGCTCTGGCAGCCTTCGAGAAACCAGGTaGGACTCTCGGCTGACCTCCTGGGCCTTCTGGACAGCCTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AASKSGGSGSLRETR*DSRLTSWAFWTACC Trigger: ACAACAGGCTGTCCAGAAGGCCCAGGAGGTCAGCCGAGAGTCGCACCTGGTTTCTCGAAGGCTGCCAGAGCCACCAGACTTAGAGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS GCA 90 bp | CCTAGGCTGGTGAGTGAGTCTCGGATGAGGAAGTCGCCGTTCCGCTaGACCAGAGTCTCAGAGACCTCACGAGGGATGCGTCCGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PRLVSESRMRKSPFR*TRVSETSRGMRPWY Trigger: GTACCACGGACGCATCCCTCGTGAGGTCTCTGAGACTCTGGTGCAGCGGAACGGCGACTTCCTCATCCGAGACTCACTCACCAGCCTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CCA 90 bp | GTGCCGTGTCCTCCAGTAGGGCTTCAGTTCCCTCCCCTGCCTCCTTaGCTGCCTCTAAGTCTGGTGGCTCTGGCAGCCTTCGAGAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: VPCPPVGLQFPPLPP*LPLSLVALAAFEKP Trigger: TGGTTTCTCGAAGGCTGCCAGAGCCACCAGACTTAGAGGCAGCCAAGGAGGCAGGGGAGGGAACTGAAGCCCTACTGGAGGACACGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR CAA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGCGAAGCTGAACATGTaGCCCATCGTCCCCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLAKLNM*PIVPRS Trigger: GCTGCGGGGGACGATGGGCAACATGTTCAGCTTCGC...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS TCA 90 bp | CTGGTGGCTCTGGCAGCCTTCGAGAAACCAGGTGCGACTCTCGGCTaGCCTCCTGGGCCTTCTGGACAGCCTGTTGTTTCTGAGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVALAAFEKPGATLG*PPGPSGQPVVSEPS Trigger: AGAAGGCTCAGAAACAACAGGCTGTCCAGAAGGCCCAGGAGGTCAGCCGAGAGTCGCACCTGGTTTCTCGAAGGCTGCCAGAGCCACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS GCA 90 bp | GTAACGCCCAGTATCCTAGCAACCAGGCAGTCAACCTTGGTGACATaGCGGGCCAGTGTCCGGGCATCCACCTCAGACAGCAGCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTPSILATRQSTLVT*RASVRASTSDSSSL Trigger: CAAGGAGCTGCTGTCTGAGGTGGATGCCCGGACACTGGCCCGGCATGTCACCAAGGTTGACTGCCTGGTTGCTAGGATACTGGGCGTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS GCA 90 bp | GGGAGGGTGAGCAGCTCCATGCCCCAGCGGACTCCCATTAGGGTCTaGATCTCCTTGGTAACGCCCAGTATCCTAGCAACCAGGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRVSSSMPQRTPIRV*ISLVTPSILATRQS Trigger: TGACTGCCTGGTTGCTAGGATACTGGGCGTTACCAAGGAGATGCAGACCCTAATGGGAGTCCGCTGGGGCATGGAGCTGCTCACCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS GCA 90 bp | AGAATGGCACCCTCCGTGTGTCGCTGTCGCAGGGTCATCCATGTCTaGTCCAGCCTTGAAATCTGGGCCATCTCCAGGGCGCCCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: RMAPSVCRCRRVIHV*SSLEIWAISRAPMT Trigger: TGTCATGGGCGCCCTGGAGATGGCCCAGATTTCAAGGCTGGAGCAGACATGGATGACCCTGCGACAGCGACACACGGAGGGTGCCATTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CCA 90 bp | AGGGCCACCTCCAGAGGCCGGTTCTCCTTGGGGATCAGCTGGGACTaGAAGGTAGCCAGGTTGAAAGAGGAGGTGGCTTCTACTACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RATSRGRFSLGISWD*KVARLKEEVASTTG Trigger: CCCTGTAGTAGAAGCCACCTCCTCTTTCAACCTGGCTACCTTCCAGTCCCAGCTGATCCCCAAGGAGAACCGGCCTCTGGAGGTGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | GAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGGGGTGTGGGATGGGCTaGCGTGAGGGGCCCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVPVHLEGRLGACVMEEWGCGMG*REGPCL Trigger: CAGACAGGGCCCCTCACGCAAGCCCATCCCACACCC...CCATTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTACCAGGCAGTCAACCTaGGTGACATGCCGGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLTRQST*VTCRAS Trigger: ACTGGCCCGGCATGTCACCAAGGTTGACTGCCTGGT...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS TCA 90 bp | GACTCTCGGCTGACCTCCTGGGCCTTCTGGACAGCCTGTTGTTTCTaGGCCTTCTTGATGTTAGGGCGGGGCATGGTACCCATGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DSRLTSWAFWTACCF*AFLMLGRGMVPMWL Trigger: CAGCCACATGGGTACCATGCCCCGCCCTAACATCAAGAAGGCTCAGAAACAACAGGCTGTCCAGAAGGCCCAGGAGGTCAGCCGAGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS CCA 90 bp | GGGCTCTCGGAGATAGGAGACAGGGGTGAGTGGAGATCTGGGATCTaGTCCATGCTGAGGGCACAGTTTCGGATGGAGTCTCGAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GLSEIGDRGEWRSGI*SMLRAQFRMESRGW Trigger: CCATCCTCGAGACTCCATCCGAAACTGTGCCCTCAGCATGGACCAGATCCCAGATCTCCACTCACCCCTGTCTCCTATCTCCGAGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGGGTAATGAGGTGCTGTaGGGGCAGCCATCGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: NILGLITVSLWCSGGNVLGNEVL*GQPSLR Trigger: CCGCAGCGATGGCTGCCCCAACAGCACCTCATTACC...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | CCAGAACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTGGGACTGTGAAGGTCTaGCCCCACTCCCCGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PEHSWADHSVPVVLWRECGTVKV*PHSPSE Trigger: CTCTGACGGGGAGTGGGGCAAGACCTTCACAGTCCC...ACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGGCCAGCTGTATGGTCTaGTGCAGCAGAGCTGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: NILGLITVSLWCSGGNVLASCMV*CSRAAR Trigger: GCGGGCAGCTCTGCTGCACAAGACCATACAGCTGGC...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR CAA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGGCGAAGCTGAACATGTaGCCCATCGTCCCCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NILGLITVSLWCSGGNVLAKLNM*PIVPRS Trigger: GCTGCGGGGGACGATGGGCAACATGTTCAGCTTCGC...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | CCAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTACTCCCCAGGAGGCTTaGGAGTATTTCCAGGACATA | + |
|
Preference number: 5 (lower is better) Translates to: PAQAGGRSRGSCPFGRETTPQEA*EYFQDI Trigger: TATGTCCTGGAAATACTCCAAAGCCTCCTGGGGAGT...AGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | GGCGGTCAGGGAGGGGCTGCTGTAAACCTGGTTCCCCATATCATCTGGGAAGTCAGGGTCTGCATCTCCTaGGTAACGCCCAGTATCCTA | + |
|
Preference number: 5 (lower is better) Translates to: GGQGGAAVNLVPHIIWEVRVCIS*VTPSIL Trigger: TAGGATACTGGGCGTTACCAAGGAGATGCAGACCCT...GACTTCCCAGATGATATGGGGAACCAGGTTTACAGCAGCCCCTCCCTGACCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | CAGCGCAAGCCGGTGGGAGGAGCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGCCTTCACCACCACCTaGTTGATCTTGAAGTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QRKPVGGAEVPVHLEGRLAFTTT*LILKCK Trigger: CTTGCACTTCAAGATCAACAAGGTGGTGGTGAAGGC...AAGTCTCCCTTCCAAATGGACAGGAACCTCTGCTCCTCCCACCGGCTTGCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | CTTATTTACAGTAAGATGGAGGCTGTGGCACCTCTAGGCATAGATGCCTGCAGGGGTAATGAGGTGCTGTaGGGGCAGCCATCGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LIYSKMEAVAPLGIDACRGNEVL*GQPSLR Trigger: CCGCAGCGATGGCTGCCCCAACAGCACCTCATTACC...CCTGCAGGCATCTATGCCTAGAGGTGCCACAGCCTCCATCTTACTGTAAATAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS GCA 90 bp | TCCAGCTCTGCAGCAGTCCTTTCTGGGCTCACATCCCCAGGGACTTaGTCCTTCTCTGTGTCTACTGTGAGATCCTCCAGTTCCCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: SSSAAVLSGLTSPGT*SFSVSTVRSSSSLI Trigger: TATGAGGGAACTGGAGGATCTCACAGTAGACACAGAGAAGGAGCAAGTCCCTGGGGATGTGAGCCCAGAAAGGACTGCTGCAGAGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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| CDS CCA 90 bp | CCTTGTGCAGTTTCTCTGGCGAGGAGTCAAGAATGTACTTCTCCTTaGAGAACTTCACATAGTCCCCAGCGGCCTCCAGCTCTGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PCAVSLARSQECTSP*RTSHSPQRPPALQQ Trigger: CTGCTGCAGAGCTGGAGGCCGCTGGGGACTATGTGAAGTTCTCCAAGGAGAAGTACATTCTTGACTCCTCGCCAGAGAAACTGCACAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CCA 90 bp | GGGGGCAGAGTCACATTCCAGCAGAGTAATGAAAGGAAGTACGTGTaGAAACGTGGTGTTGCTCAGCGGTGGGCCTTCTTTGCCCTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGRVTFQQSNERKYV*KRGVAQRWAFFALV Trigger: AACGAGGGCAAAGAAGGCCCACCGCTGAGCAACACCACGTTTCCACACGTACTTCCTTTCATTACTCTGCTGGAATGTGACTCTGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGCACATCCCCAGGGACTaGCTCCTTCTCTGTGTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: NILGLITVSLWCSGGNVLHIPRD*LLLCVY Trigger: GTAGACACAGAGAAGGAGCAAGTCCCTGGGGATGTG...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR CAA 90 bp | AAGATCACTCAGTGCTCTTGGCCACTAAGCCATCTCTTCTGGTCTCTAGATTTTGGGTGTGGGATGGGCTaGCGTGAGGGGCCCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KITQCSWPLSHLFWSLDFGCGMG*REGPCL Trigger: CAGACAGGGCCCCTCACGCAAGCCCATCCCACACCC...AAAATCTAGAGACCAGAAGAGATGGCTTAGTGGCCAAGAGCACTGAGTGATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
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| CDS-3UTR CAA 90 bp | GCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAAAGGCAGGAGGACTCTTaGGGAGTGTCACCATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AEVPVHLEGRLGACVMEERQEDS*GVSPCH Trigger: ATGACATGGTGACACTCCCAAAGAGTCCTCCTGCCT...TTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR CAA 90 bp | GCAGAGGTTCCTGTCCATTTGGAAGGGAGACTTGGCGCGTGTGTGATGGAAGAATGGAAGGTAGCCAGGTaGAAAGAGGAGGTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AEVPVHLEGRLGACVMEEWKVAR*KEEVAS Trigger: AGAAGCCACCTCCTCTTTCAACCTGGCTACCTTCCA...TTCTTCCATCACACACGCGCCAAGTCTCCCTTCCAAATGGACAGGAACCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CCA 90 bp | GTGGCTGTACATGTCACTAGAACGTGCATAGGCAGGAGGACTCTTTaGGAGTGTCACCATGTCATCCTGTGTGGCTTCAAAGGTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAVHVTRTCIGRRTL*ECHHVILCGFKGVR Trigger: CCTGACACCTTTGAAGCCACACAGGATGACATGGTGACACTCCCAAAGAGTCCTCCTGCCTATGCACGTTCTAGTGACATGTACAGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR CAA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGTTCACCACCACCTTGTaGATCTTGAAGTGCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NILGLITVSLWCSGGNVLFTTTL*ILKCKA Trigger: GGCCTTGCACTTCAAGATCAACAAGGTGGTGGTGAA...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | AACATTCTTGGGCTGATCACAGTGTCCCTGTGGTGCTCTGGAGGGAATGTCCTGCCAAGGCCCTTGAACTaGAAGAACTTGAACTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NILGLITVSLWCSGGNVLPRPLN*KNLNFL Trigger: CAGAAAGTTCAAGTTCTTCAAGTTCAAGGGCCTTGG...CAGGACATTCCCTCCAGAGCACCACAGGGACACTGTGATCAGCCCAAGAATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR CAA 90 bp | ATTTTATTTGTATGGCTATTTTGCTCACACACCGCATGTGTGCCCGGTACCCAATCGCTGCGGGTGACCTaGTCAGTGGTGAGTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ILFVWLFCSHTACVPGTQSLRVT*SVVSPS Trigger: TGATGGACTCACCACTGACAAGGTCACCCGCAGCGA...TTGGGTACCGGGCACACATGCGGTGTGTGAGCAAAATAGCCATACAAATAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | CTTATTTACAGTAAGATGGAGGCTGTGGCACCTCTAGGCATAGATGCCTGCAGGACTCCCCAGGAGGCTTaGGAGTATTTCCAGGACATA | + |
|
Preference number: 5 (lower is better) Translates to: LIYSKMEAVAPLGIDACRTPQEA*EYFQDI Trigger: TATGTCCTGGAAATACTCCAAAGCCTCCTGGGGAGT...CCTGCAGGCATCTATGCCTAGAGGTGCCACAGCCTCCATCTTACTGTAAATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGGGGACTGTGAAGGTCTaGCCCCACTCCCCGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EREHGFCTYIYTRLIYSKGTVKV*PHSPSE Trigger: CTCTGACGGGGAGTGGGGCAAGACCTTCACAGTCCC...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | AAGATCACTCAGTGCTCTTGGCCACTAAGCCATCTCTTCTGGTCTCTAGATTTTTTCACCACCACCTTGTaGATCTTGAAGTGCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KITQCSWPLSHLFWSLDFFTTTL*ILKCKA Trigger: GGCCTTGCACTTCAAGATCAACAAGGTGGTGGTGAA...AAAATCTAGAGACCAGAAGAGATGGCTTAGTGGCCAAGAGCACTGAGTGATCTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | ATTTTATTTGTATGGCTATTTTGCTCACACACCGCATGTGTGCCCGGTACCCAAGCCTTCACCACCACCTaGTTGATCTTGAAGTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILFVWLFCSHTACVPGTQAFTTT*LILKCK Trigger: CTTGCACTTCAAGATCAACAAGGTGGTGGTGAAGGC...TTGGGTACCGGGCACACATGCGGTGTGTGAGCAAAATAGCCATACAAATAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGTCGCTGCGGGTGACCTaGTCAGTGGTGAGTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: EHGFCTYIYTRLIYSKMESLRVT*SVVSPS Trigger: TGATGGACTCACCACTGACAAGGTCACCCGCAGCGA...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGTCAGACAGCAGCTCCTaGACCTTGCGCAGAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EREHGFCTYIYTRLIYSKSDSSS*TLRRRA Trigger: GGCCCTTCTGCGCAAGGTCAAGGAGCTGCTGTCTGA...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGAGCCAGCTGTATGGTCTaGTGCAGCAGAGCTGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KESMASVHTFTPDLFTVRASCMV*CSRAAR Trigger: GCGGGCAGCTCTGCTGCACAAGACCATACAGCTGGC...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGATGGCAGGTTCCAGCTaGTGGGACAAGGCAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EHGFCTYIYTRLIYSKMEMAGSS*WDKAVR Trigger: CCTCACTGCCTTGTCCCACAAGCTGGAACCTGCCAT...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATCAGACAGCAGCTCCTaGACCTTGCGCAGAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KESMASVHTFTPDLFTVRSDSSS*TLRRRA Trigger: GGCCCTTCTGCGCAAGGTCAAGGAGCTGCTGTCTGA...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGAACCAGGCAGTCAACCTaGGTGACATGCCGGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KESMASVHTFTPDLFTVRTRQST*VTCRAS Trigger: ACTGGCCCGGCATGTCACCAAGGTTGACTGCCTGGT...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | AAGATCACTCAGTGCTCTTGGCCACTAAGCCATCTCTTCTGGTCTCTAGATTTTCTCTTGAGGAAAGGCTaGAGCTTCTTCTCGTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: KITQCSWPLSHLFWSLDFLLRKG*SFFSYR Trigger: TCTGTACGAGAAGAAGCTCAAGCCTTTCCTCAAGAG...AAAATCTAGAGACCAGAAGAGATGGCTTAGTGGCCAAGAGCACTGAGTGATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGCCCTCGTTCAGGCTCTaGAGGAAAGGCTTGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EHGFCTYIYTRLIYSKMEPSFRL*RKGLSF Trigger: GAAGCTCAAGCCTTTCCTCAAGAGCCTGAACGAGGG...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGTGGAAGGTAGCCAGGTaGAAAGAGGAGGTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EHGFCTYIYTRLIYSKMEWKVAR*KEEVAS Trigger: AGAAGCCACCTCCTCTTTCAACCTGGCTACCTTCCA...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGAATGGCAGGTTCCAGCTaGTGGGACAAGGCAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KESMASVHTFTPDLFTVRMAGSS*WDKAVR Trigger: CCTCACTGCCTTGTCCCACAAGCTGGAACCTGCCAT...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGACCCTCGTTCAGGCTCTaGAGGAAAGGCTTGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KESMASVHTFTPDLFTVRPSFRL*RKGLSF Trigger: GAAGCTCAAGCCTTTCCTCAAGAGCCTGAACGAGGG...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGAGGCTCCCAAGGCCCTaGAACTTGAAGAACTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EREHGFCTYIYTRLIYSKRLPRP*NLKNLN Trigger: GTTCAAGTTCTTCAAGTTCAAGGGCCTTGGGAGCCT...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR CAA 90 bp | GAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATGGAGCTTCTGGACAGCCTGTaGTTTCTGAGCCTTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: EHGFCTYIYTRLIYSKMELLDSL*FLSLLD Trigger: ATCAAGAAGGCTCAGAAACAACAGGCTGTCCAGAAG...CTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGAAGGGTCTGCATCTCCTaGGTAACGCCCAGTATCCTA | + |
|
Preference number: 5 (lower is better) Translates to: KESMASVHTFTPDLFTVRRVCIS*VTPSIL Trigger: TAGGATACTGGGCGTTACCAAGGAGATGCAGACCCT...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGCTCTTGAGGAAAGGCTaGAGCTTCTTCTCGTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: EREHGFCTYIYTRLIYSKLLRKG*SFFSYR Trigger: TCTGTACGAGAAGAAGCTCAAGCCTTTCCTCAAGAG...CTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS-3UTR CAA 90 bp | AAAGAGAGCATGGCTTCTGTACATACATTTACACCAGACTTATTTACAGTAAGATTGAACTTGAAGAACTaGAACTTTCTGCCTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KESMASVHTFTPDLFTVRLNLKN*NFLPVF Trigger: GAAAACAGGCAGAAAGTTCAAGTTCTTCAAGTTCAA...TCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCCATGCTCTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS CCA 72 bp | TGCCCATCGTCCCCCGCAGCTCGGCCGCCAGCTGTATaGTCTTGTGCAGCAGAGCTGCCCGCTCCTCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: CPSSPAARPPAV*SCAAELPAPPP Trigger: CGGCGGAGGAGCGGGCAGCTCTGCTGCACAAGACCATACAGCTGGCGGCCGAGCTGCGGGGGACGATGGGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CAA 90 bp | ATGTTGCCCATCGTCCCCCGCAGCTCGGCCGCCAGCTGTATGGTCTaGTGCAGCAGAGCTGCCCGCTCCTCCGCCGAGCCTGTGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: MLPIVPRSSAASCMV*CSRAARSSAEPVQP Trigger: GGGCTGCACAGGCTCGGCGGAGGAGCGGGCAGCTCTGCTGCACAAGACCATACAGCTGGCGGCCGAGCTGCGGGGGACGATGGGCAACAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS GCA 72 bp | CGTTGGTGTGGTAGAGGCCCCCGTGGTGGGCCACAGTaGGGGCGGCCTCCAGGTGGGCTAGCACAACCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RWCGRGPRGGPQ*GRPPGGLAQPP Trigger: TGGAGGTTGTGCTAGCCCACCTGGAGGCCGCCCGCACTGTGGCCCACCACGGGGGCCTCTACCACACCAACG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CCA 72 bp | CCCCCGTGGTGGGCCACAGTGCGGGCGGCCTCCAGGTaGGCTAGCACAACCTCCACACCGTGTTCTGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PPWWATVRAASR*ASTTSTPCSVL Trigger: CAGCACAGAACACGGTGTGGAGGTTGTGCTAGCCCACCTGGAGGCCGCCCGCACTGTGGCCCACCACGGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CAA 72 bp | ATCGTCCCCCGCAGCTCGGCCGCCAGCTGTATGGTCTaGTGCAGCAGAGCTGCCCGCTCCTCCGCCGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: IVPRSSAASCMV*CSRAARSSAEP Trigger: AGGCTCGGCGGAGGAGCGGGCAGCTCTGCTGCACAAGACCATACAGCTGGCGGCCGAGCTGCGGGGGACGAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS GCA 72 bp | CCTTCCGGGGAGTCTCTCCTGCGGCCTGCTCTCGGCTaGCACGGACCGGAGGCTGGAGCTGACAGTAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PSGESLLRPALG*HGPEAGADSSD Trigger: GTCACTACTGTCAGCTCCAGCCTCCGGTCCGTGGCAGCCGAGAGCAGGCCGCAGGAGAGACTCCCCGGAAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CAA 72 bp | TCCAGGGCGCCCATGACAGCGGCGAAGCTGAACATGTaGCCCATCGTCCCCCGCAGCTCGGCCGCCAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRAPMTAAKLNM*PIVPRSSAASC Trigger: ACAGCTGGCGGCCGAGCTGCGGGGGACGATGGGCAACATGTTCAGCTTCGCCGCTGTCATGGGCGCCCTGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS TCA 72 bp | GCTGGAGCGGCGGGCAACTGGGGAGGCAGGCTGTGCTaGAGTAGAGGGGGTGGCAGAAGGAGCATGGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: AGAAGNWGGRLC*SRGGGRRSMDS Trigger: CGAGTCCATGCTCCTTCTGCCACCCCCTCTACTTCAGCACAGCCTGCCTCCCCAGTTGCCCGCCGCTCCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS TCA 72 bp | GCAGGTCTAGTCGTAGCTGCCGGCCATGGGGGAGGGTaGGCAGCTCCATGCCCCAGCGGACTCCCATTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGLVVAAGHGGG*AAPCPSGLPLG Trigger: CCCTAATGGGAGTCCGCTGGGGCATGGAGCTGCTCACCCTCCCCCATGGCCGGCAGCTACGACTAGACCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS GCA 72 bp | CCAGGTGGGCTAGCACAACCTCCACACCGTGTTCTGTaGTGCCCCAAGGTTCAGGACCCTCGGCGGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGGLAQPPHRVL*CPKVQDPRRGQ Trigger: CTGCCCCCGCCGAGGGTCCTGAACCTTGGGGCAGCACAGAACACGGTGTGGAGGTTGTGCTAGCCCACCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CAA 90 bp | TGGGCCATCTCCAGGGCGCCCATGACAGCGGCGAAGCTGAACATGTaGCCCATCGTCCCCCGCAGCTCGGCCGCCAGCTGTATGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WAISRAPMTAAKLNM*PIVPRSSAASCMVL Trigger: CAAGACCATACAGCTGGCGGCCGAGCTGCGGGGGACGATGGGCAACATGTTCAGCTTCGCCGCTGTCATGGGCGCCCTGGAGATGGCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS TCA 72 bp | CCAGTGTCCGGGCATCCACCTCAGACAGCAGCTCCTTaGCCTTGCGCAGAAGGGCCACCTCCAGAGGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PVSGHPPQTAAP*PCAEGPPPEAG Trigger: ACCGGCCTCTGGAGGTGGCCCTTCTGCGCAAGGTCAAGGAGCTGCTGTCTGAGGTGGATGCCCGGACACTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS TCA 72 bp | GGCTGCCCCAGAGGAGCCGCATCTGGAACTCTGTGCTaGATACTTCCAGGAGCTCCGGTCGGGCTTGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: GCPRGAASGTLC*ILPGAPVGLGT Trigger: GGTTCCAAGCCCGACCGGAGCTCCTGGAAGTATTCAGCACAGAGTTCCAGATGCGGCTCCTCTGGGGCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS GCA 72 bp | CCCTCCGTGTGTCGCTGTCGCAGGGTCATCCATGTCTaGTCCAGCCTTGAAATCTGGGCCATCTCCAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSVCRCRRVIHV*SSLEIWAISRA Trigger: CGCCCTGGAGATGGCCCAGATTTCAAGGCTGGAGCAGACATGGATGACCCTGCGACAGCGACACACGGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CCA 72 bp | CCTCCAGTAGGGCTTCAGTTCCCTCCCCTGCCTCCTTaGCTGCCTCTAAGTCTGGTGGCTCTGGCAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PPVGLQFPPLPP*LPLSLVALAAF Trigger: GAAGGCTGCCAGAGCCACCAGACTTAGAGGCAGCCAAGGAGGCAGGGGAGGGAACTGAAGCCCTACTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS CCA 72 bp | CGCAGGGTCATCCATGTCTGCTCCAGCCTTGAAATCTaGGCCATCTCCAGGGCGCCCATGACAGCGGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RRVIHVCSSLEI*AISRAPMTAAK Trigger: CTTCGCCGCTGTCATGGGCGCCCTGGAGATGGCCCAGATTTCAAGGCTGGAGCAGACATGGATGACCCTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS TCA 72 bp | TCGCTGTCGCAGGGTCATCCATGTCTGCTCCAGCCTTaGAATCTGGGCCATCTCCAGGGCGCCCATGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSQGHPCLLQP*NLGHLQGAHDS Trigger: GCTGTCATGGGCGCCCTGGAGATGGCCCAGATTTCAAGGCTGGAGCAGACATGGATGACCCTGCGACAGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS GCA 72 bp | AAGTCTGGTGGCTCTGGCAGCCTTCGAGAAACCAGGTaGGACTCTCGGCTGACCTCCTGGGCCTTCTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: KSGGSGSLRETR*DSRLTSWAFWT Trigger: TGTCCAGAAGGCCCAGGAGGTCAGCCGAGAGTCGCACCTGGTTTCTCGAAGGCTGCCAGAGCCACCAGACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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| CDS CAA 72 bp | GTAACGCCCAGTATCCTAGCAACCAGGCAGTCAACCTaGGTGACATGCCGGGCCAGTGTCCGGGCATCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VTPSILATRQST*VTCRASVRAST Trigger: GGTGGATGCCCGGACACTGGCCCGGCATGTCACCAAGGTTGACTGCCTGGTTGCTAGGATACTGGGCGTTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS GCA 72 bp | GTGAGTGAGTCTCGGATGAGGAAGTCGCCGTTCCGCTaGACCAGAGTCTCAGAGACCTCACGAGGGATGCGT | + |
|
Preference number: 6 (lower is better) Translates to: VSESRMRKSPFR*TRVSETSRGMR Trigger: ACGCATCCCTCGTGAGGTCTCTGAGACTCTGGTGCAGCGGAACGGCGACTTCCTCATCCGAGACTCACTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS GCA 72 bp | CTCCTCCGCCGAGCCTGTGCAGCCCAGGATATCCACTaGCAGCATGATGGACATGGTGTGGAACCTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLRRACAAQDIH*QHDGHGVEPFQ Trigger: CTGGAAAGGTTCCACACCATGTCCATCATGCTGGCAGTGGATATCCTGGGCTGCACAGGCTCGGCGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS CAA 90 bp | CAGGTGCGACTCTCGGCTGACCTCCTGGGCCTTCTGGACAGCCTGTaGTTTCTGAGCCTTCTTGATGTTAGGGCGGGGCATGGTACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QVRLSADLLGLLDSL*FLSLLDVRAGHGTH Trigger: ATGGGTACCATGCCCCGCCCTAACATCAAGAAGGCTCAGAAACAACAGGCTGTCCAGAAGGCCCAGGAGGTCAGCCGAGAGTCGCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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| CDS TCA 72 bp | CTGACCTCCTGGGCCTTCTGGACAGCCTGTTGTTTCTaGGCCTTCTTGATGTTAGGGCGGGGCATGGTACCC | + |
|
Preference number: 6 (lower is better) Translates to: LTSWAFWTACCF*AFLMLGRGMVP Trigger: GGGTACCATGCCCCGCCCTAACATCAAGAAGGCTCAGAAACAACAGGCTGTCCAGAAGGCCCAGGAGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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| CDS TCA 72 bp | ACAGGGGTGAGTGGAGATCTGGGATCTGGTCCATGCTaGGGGCACAGTTTCGGATGGAGTCTCGAGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGVSGDLGSGPC*GHSFGWSLEDG Trigger: CCCATCCTCGAGACTCCATCCGAAACTGTGCCCTCAGCATGGACCAGATCCCAGATCTCCACTCACCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS GCA 72 bp | AGCAGCTCCATGCCCCAGCGGACTCCCATTAGGGTCTaGATCTCCTTGGTAACGCCCAGTATCCTAGCAACC | + |
|
Preference number: 6 (lower is better) Translates to: SSSMPQRTPIRV*ISLVTPSILAT Trigger: GGTTGCTAGGATACTGGGCGTTACCAAGGAGATGCAGACCCTAATGGGAGTCCGCTGGGGCATGGAGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS CCA 72 bp | ATGCTGAGGGCACAGTTTCGGATGGAGTCTCGAGGATaGGGTAATGAGGTGCTGTTGGGGCAGCCATCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: MLRAQFRMESRG*GNEVLLGQPSL Trigger: CAGCGATGGCTGCCCCAACAGCACCTCATTACCCCATCCTCGAGACTCCATCCGAAACTGTGCCCTCAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS CCA 72 bp | TCCAGAGGCCGGTTCTCCTTGGGGATCAGCTGGGACTaGAAGGTAGCCAGGTTGAAAGAGGAGGTGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRGRFSLGISWD*KVARLKEEVAS Trigger: AGAAGCCACCTCCTCTTTCAACCTGGCTACCTTCCAGTCCCAGCTGATCCCCAAGGAGAACCGGCCTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS CAA 72 bp | CTCTCGGCTGACCTCCTGGGCCTTCTGGACAGCCTGTaGTTTCTGAGCCTTCTTGATGTTAGGGCGGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LSADLLGLLDSL*FLSLLDVRAGH Trigger: ATGCCCCGCCCTAACATCAAGAAGGCTCAGAAACAACAGGCTGTCCAGAAGGCCCAGGAGGTCAGCCGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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| CDS CAA 90 bp | TGGGGTAATGAGGTGCTGTTGGGGCAGCCATCGCTGCGGGTGACCTaGTCAGTGGTGAGTCCATCAGTCATGGTAATGCTTCGCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WGNEVLLGQPSLRVT*SVVSPSVMVMLRLF Trigger: GAAGAGGCGAAGCATTACCATGACTGATGGACTCACCACTGACAAGGTCACCCGCAGCGATGGCTGCCCCAACAGCACCTCATTACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS CAA 90 bp | GGCCGGTTCTCCTTGGGGATCAGCTGGGACTGGAAGGTAGCCAGGTaGAAAGAGGAGGTGGCTTCTACTACAGGGACTGTGAAGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GRFSLGISWDWKVAR*KEEVASTTGTVKVL Trigger: CAAGACCTTCACAGTCCCTGTAGTAGAAGCCACCTCCTCTTTCAACCTGGCTACCTTCCAGTCCCAGCTGATCCCCAAGGAGAACCGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS TCA 72 bp | GTCAGGCTCCGGACAAGACCGGATACTAGCAGAGGCTaGAGACCGTCTCAGAGAAAAGGACCGCGGGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: VRLRTRPDTSRG*RPSQRKGPREI Trigger: AATCTCCCGCGGTCCTTTTCTCTGAGACGGTCTTCAGCCTCTGCTAGTATCCGGTCTTGTCCGGAGCCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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| CDS CAA 72 bp | GAGGTGCTGTTGGGGCAGCCATCGCTGCGGGTGACCTaGTCAGTGGTGAGTCCATCAGTCATGGTAATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EVLLGQPSLRVT*SVVSPSVMVML Trigger: AAGCATTACCATGACTGATGGACTCACCACTGACAAGGTCACCCGCAGCGATGGCTGCCCCAACAGCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS CAA 72 bp | ATGCCCCAGCGGACTCCCATTAGGGTCTGCATCTCCTaGGTAACGCCCAGTATCCTAGCAACCAGGCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: MPQRTPIRVCIS*VTPSILATRQS Trigger: TGACTGCCTGGTTGCTAGGATACTGGGCGTTACCAAGGAGATGCAGACCCTAATGGGAGTCCGCTGGGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS CAA 90 bp | CTCCAGCTCTGCAGCAGTCCTTTCTGGGCTCACATCCCCAGGGACTaGCTCCTTCTCTGTGTCTACTGTGAGATCCTCCAGTTCCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LQLCSSPFWAHIPRD*LLLCVYCEILQFPH Trigger: ATGAGGGAACTGGAGGATCTCACAGTAGACACAGAGAAGGAGCAAGTCCCTGGGGATGTGAGCCCAGAAAGGACTGCTGCAGAGCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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| CDS CCA 72 bp | GAGGACTCTTTGGGAGTGTCACCATGTCATCCTGTGTaGCTTCAAAGGTGTCAGGCTCCGGACAAGACCGGA | + |
|
Preference number: 6 (lower is better) Translates to: EDSLGVSPCHPV*LQRCQAPDKTG Trigger: TCCGGTCTTGTCCGGAGCCTGACACCTTTGAAGCCACACAGGATGACATGGTGACACTCCCAAAGAGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS CCA 72 bp | GAGATAGGAGACAGGGGTGAGTGGAGATCTGGGATCTaGTCCATGCTGAGGGCACAGTTTCGGATGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: EIGDRGEWRSGI*SMLRAQFRMES Trigger: AGACTCCATCCGAAACTGTGCCCTCAGCATGGACCAGATCCCAGATCTCCACTCACCCCTGTCTCCTATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CAA 72 bp | TGCAGCAGTCCTTTCTGGGCTCACATCCCCAGGGACTaGCTCCTTCTCTGTGTCTACTGTGAGATCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CSSPFWAHIPRD*LLLCVYCEILQ Trigger: CTGGAGGATCTCACAGTAGACACAGAGAAGGAGCAAGTCCCTGGGGATGTGAGCCCAGAAAGGACTGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS CCA 72 bp | CACAGCTCGCTAGAGCGGATGGCAGGTTCCAGCTTGTaGGACAAGGCAGTGAGGACTTTGTCAAACTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: HSSLERMAGSSL*DKAVRTLSNFS Trigger: TGAGAAGTTTGACAAAGTCCTCACTGCCTTGTCCCACAAGCTGGAACCTGCCATCCGCTCTAGCGAGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CAA 72 bp | GCTGAAGACCGTCTCAGAGAAAAGGACCGCGGGAGATaGGAAAGGCTCCCAAGGCCCTTGAACTTGAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: AEDRLREKDRGR*ERLPRPLNLKN Trigger: GTTCTTCAAGTTCAAGGGCCTTGGGAGCCTTTCCAATCTCCCGCGGTCCTTTTCTCTGAGACGGTCTTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
||
| CDS CAA 72 bp | CCTTCTTTGCCCTCGTTCAGGCTCTTGAGGAAAGGCTaGAGCTTCTTCTCGTACAGAATGGCACCCTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PSLPSFRLLRKG*SFFSYRMAPSV Trigger: CACGGAGGGTGCCATTCTGTACGAGAAGAAGCTCAAGCCTTTCCTCAAGAGCCTGAACGAGGGCAAAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CAA 72 bp | CTCAGCGGTGGGCCTTCTTTGCCCTCGTTCAGGCTCTaGAGGAAAGGCTTGAGCTTCTTCTCGTACAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: LSGGPSLPSFRL*RKGLSFFSYRM Trigger: CATTCTGTACGAGAAGAAGCTCAAGCCTTTCCTCAAGAGCCTGAACGAGGGCAAAGAAGGCCCACCGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
||
| CDS CAA 90 bp | CTACGGAGGTCCGTGCTGCTGAGCTTCAGTTCCTCTTCCAGCTCCTaGTGCAGTTTCTCTGGCGAGGAGTCAAGAATGTACTTCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRRSVLLSFSSSSSS*CSFSGEESRMYFSL Trigger: CAAGGAGAAGTACATTCTTGACTCCTCGCCAGAGAAACTGCACAAGGAGCTGGAAGAGGAACTGAAGCTCAGCAGCACGGACCTCCGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS CCA 72 bp | GTTTCTCTGGCGAGGAGTCAAGAATGTACTTCTCCTTaGAGAACTTCACATAGTCCCCAGCGGCCTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: VSLARSQECTSP*RTSHSPQRPPA Trigger: AGCTGGAGGCCGCTGGGGACTATGTGAAGTTCTCCAAGGAGAAGTACATTCTTGACTCCTCGCCAGAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS CAA 72 bp | AGAGTAATGAAAGGAAGTACGTGTGGAAACGTGGTGTaGCTCAGCGGTGGGCCTTCTTTGCCCTCGTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RVMKGSTCGNVV*LSGGPSLPSFR Trigger: CCTGAACGAGGGCAAAGAAGGCCCACCGCTGAGCAACACCACGTTTCCACACGTACTTCCTTTCATTACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS CCA 72 bp | CATGTCACTAGAACGTGCATAGGCAGGAGGACTCTTTaGGAGTGTCACCATGTCATCCTGTGTGGCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: HVTRTCIGRRTL*ECHHVILCGFK Trigger: TTTGAAGCCACACAGGATGACATGGTGACACTCCCAAAGAGTCCTCCTGCCTATGCACGTTCTAGTGACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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| CDS CCA 72 bp | GTCACATTCCAGCAGAGTAATGAAAGGAAGTACGTGTaGAAACGTGGTGTTGCTCAGCGGTGGGCCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VTFQQSNERKYV*KRGVAQRWAFF Trigger: AAAGAAGGCCCACCGCTGAGCAACACCACGTTTCCACACGTACTTCCTTTCATTACTCTGCTGGAATGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074248.11 ENSMUST00000113242.5 |
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| CDS CAA 72 bp | TTGGAAAGGCTCCCAAGGCCCTTGAACTTGAAGAACTaGAACTTTCTGCCTGTTTTCTTGGGCATCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LERLPRPLNLKN*NFLPVFLGISV Trigger: GACAGAGATGCCCAAGAAAACAGGCAGAAAGTTCAAGTTCTTCAAGTTCAAGGGCCTTGGGAGCCTTTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074248.11 |
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