Pregenerated sensors for SH2D2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028071Ensembl transcript IDs: ENSMUST00000029709.7, ENSMUST00000107581.9
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGATGGACCCAGGGTTAAGAAGGCTGGTAGGGTACAGGTGAGCTaGGCTGGTGAGGGCCAAGCAGGGACCTTTGGTGGCAGCAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: LDGPRVKKAGRVQVS*AGEGQAGTFGGSRE Trigger: CTCTCTGCTGCCACCAAAGGTCCCTGCTTGGCCCTCACCAGCCCAGCTCACCTGTACCCTACCAGCCTTCTTAACCCTGGGTCCATCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CCA 90 bp | AGGAAGAGCCTTAGGCCTGGAGCTGGGCAAAGGTTTTCGGCAGCGTaGAACACTCCATCTCGCTTCAGCCTGCTGACCTTCACCTTGCCC | + |
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Preference number: 1 (lower is better) Translates to: RKSLRPGAGQRFSAA*NTPSRFSLLTFTLP Trigger: GGGCAAGGTGAAGGTCAGCAGGCTGAAGCGAGATGGAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGCTCCAGGCCTAAGGCTCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| 3UTR CCA 90 bp | GAAGTGGGGCTGACGAAGTGGGACCTCGCCTCAGTATGGAAGAGCTaGAGGACCAGGCAGCTGACTCACAGAGCCCATTTTGGCTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: EVGLTKWDLASVWKS*RTRQLTHRAHFGFL Trigger: GAGGAAGCCAAAATGGGCTCTGTGAGTCAGCTGCCTGGTCCTCCAGCTCTTCCATACTGAGGCGAGGTCCCACTTCGTCAGCCCCACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CCA 90 bp | ACCTTAATATCCTTCCAATGCTGCATGCCAGGCAGCCGAGACCAATaGATTGGAGCTGGCACGCGGGGTGACACCTCCTCGCCATCCGTG | + |
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Preference number: 1 (lower is better) Translates to: TLISFQCCMPGSRDQ*IGAGTRGDTSSPSV Trigger: CACGGATGGCGAGGAGGTGTCACCCCGCGTGCCAGCTCCAATCCATTGGTCTCGGCTGCCTGGCATGCAGCATTGGAAGGATATTAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CCA 90 bp | TGGGTGCTTGAAGTGGGGCTGACGAAGTGGGACCTCGCCTCAGTATaGAAGAGCTGGAGGACCAGGCAGCTGACTCACAGAGCCCATTTT | + |
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Preference number: 1 (lower is better) Translates to: WVLEVGLTKWDLASV*KSWRTRQLTHRAHF Trigger: AAAATGGGCTCTGTGAGTCAGCTGCCTGGTCCTCCAGCTCTTCCATACTGAGGCGAGGTCCCACTTCGTCAGCCCCACTTCAAGCACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR TCA 90 bp | CTCTCCAGGGAGCTGGGTCAGTGTCACATGTGTGTGAGGAAGGCCTaGCCAATGAGAGGCAGCCTGGGATGGAGAGTGGTTGAAGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: LSRELGQCHMCVRKA*PMRGSLGWRVVEGN Trigger: GTTTCCTTCAACCACTCTCCATCCCAGGCTGCCTCTCATTGGTCAGGCCTTCCTCACACACATGTGACACTGACCCAGCTCCCTGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| 3UTR CCA 90 bp | CGCCCACACAGGGTGCGAGTGAGGTTGGTTCAATTGATGTTGGAGTaGCTTTGGAACCCTGGCAGAGCCTGGATGGACCCAGGGTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: RPHRVRVRLVQLMLE*LWNPGRAWMDPGLR Trigger: TCTTAACCCTGGGTCCATCCAGGCTCTGCCAGGGTTCCAAAGCCACTCCAACATCAATTGAACCAACCTCACTCGCACCCTGTGTGGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CCA 90 bp | GTTTGGAGAAATATGGTGTGGGTGCTTGAAGTGGGGCTGACGAAGTaGGACCTCGCCTCAGTATGGAAGAGCTGGAGGACCAGGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: VWRNMVWVLEVGLTK*DLASVWKSWRTRQL Trigger: CAGCTGCCTGGTCCTCCAGCTCTTCCATACTGAGGCGAGGTCCCACTTCGTCAGCCCCACTTCAAGCACCCACACCATATTTCTCCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR TCA 90 bp | GCAGTTGCTTCATGCCAAGCACTGGGCCAGTACTTTAGAGATAGCTaGGCATCCCCCAGGGCTGCCTCTAGTGAATCAGGCTCTGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: AVASCQALGQYFRDS*ASPRAASSESGSAG Trigger: TCCTGCAGAGCCTGATTCACTAGAGGCAGCCCTGGGGGATGCTCAGCTATCTCTAAAGTACTGGCCCAGTGCTTGGCATGAAGCAACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CCA 90 bp | CACAGGGTGCGAGTGAGGTTGGTTCAATTGATGTTGGAGTGGCTTTaGAACCCTGGCAGAGCCTGGATGGACCCAGGGTTAAGAAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: HRVRVRLVQLMLEWL*NPGRAWMDPGLRRL Trigger: CAGCCTTCTTAACCCTGGGTCCATCCAGGCTCTGCCAGGGTTCCAAAGCCACTCCAACATCAATTGAACCAACCTCACTCGCACCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR GCA 90 bp | ACAACAGCAGCCATTGGATCGGGGCCCAGATGCGAAGGCTCAGAGTaGCAAGGCTTCCTAAAGTCCAGTTTCTTCAGGAGGAAAAACCAG | + |
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Preference number: 1 (lower is better) Translates to: TTAAIGSGPRCEGSE*QGFLKSSFFRRKNQ Trigger: CTGGTTTTTCCTCCTGAAGAAACTGGACTTTAGGAAGCCTTGGCACTCTGAGCCTTCGCATCTGGGCCCCGATCCAATGGCTGCTGTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR GCA 90 bp | CATCTGTCCTCTGCAGACAGAAGGACAGCTCTGGGTCATACCCTCTaGCTCTTTGGCAGAGCTACAGTCTCTAGGAGAAGGTATATGGTC | + |
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Preference number: 1 (lower is better) Translates to: HLSSADRRTALGHTL*LFGRATVSRRRYMV Trigger: GACCATATACCTTCTCCTAGAGACTGTAGCTCTGCCAAAGAGGCAGAGGGTATGACCCAGAGCTGTCCTTCTGTCTGCAGAGGACAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR GCA 90 bp | TGCTCCTTTCTGCTGAGCTTAGATCTGACCTTAATATCCTTCCAATaGTGCATGCCAGGCAGCCGAGACCAATGGATTGGAGCTGGCACG | + |
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Preference number: 1 (lower is better) Translates to: CSFLLSLDLTLISFQ*CMPGSRDQWIGAGT Trigger: CGTGCCAGCTCCAATCCATTGGTCTCGGCTGCCTGGCATGCAGCATTGGAAGGATATTAAGGTCAGATCTAAGCTCAGCAGAAAGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR TCA 90 bp | GGATTCAGAGGACGGATGGGGAATGCTGAGAGGGGTTTCAATCCTTaGCCTTGGCCCAGGCTTTCTCCTTCTCTGGCTTGTTTCTTGATT | + |
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Preference number: 1 (lower is better) Translates to: GFRGRMGNAERGFNP*PWPRLSPSLACFLI Trigger: AATCAAGAAACAAGCCAGAGAAGGAGAAAGCCTGGGCCAAGGTCAAGGATTGAAACCCCTCTCAGCATTCCCCATCCGTCCTCTGAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR GCA 90 bp | CAAAACATTTCTCAGACAACAGCAGCCATTGGATCGGGGCCCAGATaGGAAGGCTCAGAGTGCCAAGGCTTCCTAAAGTCCAGTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: QNISQTTAAIGSGPR*EGSECQGFLKSSFF Trigger: GAAGAAACTGGACTTTAGGAAGCCTTGGCACTCTGAGCCTTCGCATCTGGGCCCCGATCCAATGGCTGCTGTTGTCTGAGAAATGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR TCA 90 bp | TGTGTGTGTTGCTATGAGGAAGCACAGATCCCACATTTGGTCCTCTaGCTTCCAGGCTGCTTTGGAGCAAGGAAGGCAGACTTGTTAAGG | + |
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Preference number: 1 (lower is better) Translates to: CVCCYEEAQIPHLVL*LPGCFGARKADLLR Trigger: CCTTAACAAGTCTGCCTTCCTTGCTCCAAAGCAGCCTGGAAGTCAGAGGACCAAATGTGGGATCTGTGCTTCCTCATAGCAACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CAA 90 bp | TGCGCGCGCCCACACAGGGTGCGAGTGAGGTTGGTTCAATTGATGTaGGAGTGGCTTTGGAACCCTGGCAGAGCCTGGATGGACCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: CARPHRVRVRLVQLM*EWLWNPGRAWMDPG Trigger: CCCTGGGTCCATCCAGGCTCTGCCAGGGTTCCAAAGCCACTCCAACATCAATTGAACCAACCTCACTCGCACCCTGTGTGGGCGCGCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CAA 90 bp | CGCTCATGCGCGCGCCCACACAGGGTGCGAGTGAGGTTGGTTCAATaGATGTTGGAGTGGCTTTGGAACCCTGGCAGAGCCTGGATGGAC | + |
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Preference number: 2 (lower is better) Translates to: RSCARPHRVRVRLVQ*MLEWLWNPGRAWMD Trigger: GTCCATCCAGGCTCTGCCAGGGTTCCAAAGCCACTCCAACATCAATTGAACCAACCTCACTCGCACCCTGTGTGGGCGCGCGCATGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTCCTCTGAGCCCACTGGCAGTGACGCTCTCCAGGGAGCTGGGTCAGTGTGGGATGGAGAGTGGTTaGAGGAAACCTGAAGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: PPPLSPLAVTLSRELGQCGMESG*RKPEVG Trigger: CCCTACTTCAGGTTTCCTTCAACCACTCTCCATCCC...ACACTGACCCAGCTCCCTGGAGAGCGTCACTGCCAGTGGGCTCAGAGGAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| 3UTR-3UTR TCA 90 bp | CCACCCAGCCTACCCCAGCTAAGGGAGAAGCACTTGGCAAAGGGAGTCCGTGTCACCTCTAGACCCCTATaGGCGACAGTGGGAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PPSLPQLREKHLAKGVRVTSRPL*ATVGER Trigger: TCTCTCTCCCACTGTCGCTCATAGGGGTCTAGAGGT...GACACGGACTCCCTTTGCCAAGTGCTTCTCCCTTAGCTGGGGTAGGCTGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR TCA 90 bp | CTGTGGGGAAACTGTGAGGGTGAGCACACAGTGTGGCAGCCTCCTCCTCTGAGCGGGATGGAGAGTGGTTaGAGGAAACCTGAAGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: LWGNCEGEHTVWQPPPLSGMESG*RKPEVG Trigger: CCCTACTTCAGGTTTCCTTCAACCACTCTCCATCCC...GCTCAGAGGAGGAGGCTGCCACACTGTGTGCTCACCCTCACAGTTTCCCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGGTTTCAATCCTTGACCTTGGCCCAGGCTTTCTCCTTCTCTGGCTTGTTCTGGTAGGGTACAGGTaGGCTGGGCTGGTGAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: RGVSILDLGPGFLLLWLVLVGYR*AGLVRA Trigger: GGCCCTCACCAGCCCAGCTCACCTGTACCCTACCAG...AACAAGCCAGAGAAGGAGAAAGCCTGGGCCAAGGTCAAGGATTGAAACCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGGACAGGGTCTTACTCTGCCACACAGTCCTCAGAATGCAGCTCTGGACCAGTGGGGTTAAGGGTTaGCAGGCAGCAGGAGGGCGG | + |
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Preference number: 2 (lower is better) Translates to: MKDRVLLCHTVLRMQLWTSGVKG*QAAGGR Trigger: CCGCCCTCCTGCTGCCTGGCAACCCTTAACCCCACT...GGTCCAGAGCTGCATTCTGAGGACTGTGTGGCAGAGTAAGACCCTGTCCTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR GCA 90 bp | CCACCCAGCCTACCCCAGCTAAGGGAGAAGCACTTGGCAAAGGGAGTCCGTGTCGGACCATCTGTCCTCTaGAGACAGAAGGACAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PPSLPQLREKHLAKGVRVGPSVL*RQKDSS Trigger: AGAGCTGTCCTTCTGTCTGCAGAGGACAGATGGTCC...GACACGGACTCCCTTTGCCAAGTGCTTCTCCCTTAGCTGGGGTAGGCTGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR GCA 90 bp | CCACCCAGCCTACCCCAGCTAAGGGAGAAGCACTTGGCAAAGGGAGTCCGTGTCTCTCAGGACACAAAATaGCCCAAGCTACCCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PPSLPQLREKHLAKGVRVSQDTK*PKLPSQ Trigger: CTGGGAGGGTAGCTTGGGGCATTTTGTGTCCTGAGA...GACACGGACTCCCTTTGCCAAGTGCTTCTCCCTTAGCTGGGGTAGGCTGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTGAGCCCACTGGCAGTGACGCTCTCCAGGGAGCTGGGTCAGTGTCACATAGAGGCAGCCTGGGATaGAGAGTGGTTGAAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: SSEPTGSDALQGAGSVSHRGSLG*RVVEGN Trigger: GTTTCCTTCAACCACTCTCCATCCCAGGCTGCCTCT...ATGTGACACTGACCCAGCTCCCTGGAGAGCGTCACTGCCAGTGGGCTCAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| 3UTR-3UTR CCA 90 bp | CATTTCTCAGACAACAGCAGCCATTGGATCGGGGCCCAGATGCGAAGGCTCAGAAGGGTACAGGTGAGCTaGGCTGGTGAGGGCCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: HFSDNSSHWIGAQMRRLRRVQVS*AGEGQA Trigger: TGCTTGGCCCTCACCAGCCCAGCTCACCTGTACCCT...TCTGAGCCTTCGCATCTGGGCCCCGATCCAATGGCTGCTGTTGTCTGAGAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CAA 90 bp | TGCCCGGGCTGCCCACCCAGCCTACCCCAGCTAAGGGAGAAGCACTaGGCAAAGGGAGTCCGTGTCCTTGTCCTCATGGTTTTTAACTTT | + |
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Preference number: 2 (lower is better) Translates to: CPGCPPSLPQLREKH*AKGVRVLVLMVFNF Trigger: AAAGTTAAAAACCATGAGGACAAGGACACGGACTCCCTTTGCCAAGTGCTTCTCCCTTAGCTGGGGTAGGCTGGGTGGGCAGCCCGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR TCA 90 bp | AACATTTCTCAGACAACAGCAGCCATTGGATCGGGGCCCAGATGCGAAGGCTCAGGAAGGCCTGACCAATaGGAGGCAGCCTGGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: NISQTTAAIGSGPRCEGSGRPDQ*EAAWDG Trigger: TCCATCCCAGGCTGCCTCTCATTGGTCAGGCCTTCC...TGAGCCTTCGCATCTGGGCCCCGATCCAATGGCTGCTGTTGTCTGAGAAATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR TCA 90 bp | CATTTCTCAGACAACAGCAGCCATTGGATCGGGGCCCAGATGCGAAGGCTCAGATATGGTGTGGGTGCTTaGAGTGGGGCTGACGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: HFSDNSSHWIGAQMRRLRYGVGA*SGADEV Trigger: CACTTCGTCAGCCCCACTTCAAGCACCCACACCATA...TCTGAGCCTTCGCATCTGGGCCCCGATCCAATGGCTGCTGTTGTCTGAGAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR CCA 90 bp | GAAACTCTGTGGGGAAACTGTGAGGGTGAGCACACAGTGTGGCAGCCTCCTCCTAGAGGCAGCCTGGGATaGAGAGTGGTTGAAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: ETLWGNCEGEHTVWQPPPRGSLG*RVVEGN Trigger: GTTTCCTTCAACCACTCTCCATCCCAGGCTGCCTCT...AGGAGGAGGCTGCCACACTGTGTGCTCACCCTCACAGTTTCCCCACAGAGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| 3UTR-3UTR CCA 90 bp | TGGAACACAGGACACTGTGCGTGGTGCATGTGTGTGTGTGTGTGTGCGCGCGCGATGACTGAAACTCTGTaGGGAAACTGTGAGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: WNTGHCAWCMCVCVCARAMTETL*GNCEGE Trigger: CTCACCCTCACAGTTTCCCCACAGAGTTTCAGTCAT...CGCGCGCGCACACACACACACACACATGCACCACGCACAGTGTCCTGTGTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR CCA 90 bp | AACATTTCTCAGACAACAGCAGCCATTGGATCGGGGCCCAGATGCGAAGGCTCAAGCAGGGACCTTTGGTaGCAGCAGAGAGGAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: NISQTTAAIGSGPRCEGSSRDLW*QQRGSL Trigger: CAGGCTTCCTCTCTGCTGCCACCAAAGGTCCCTGCT...TGAGCCTTCGCATCTGGGCCCCGATCCAATGGCTGCTGTTGTCTGAGAAATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CAA 90 bp | ACACAGGGTGCGAGTGAGGTTGGTTCAATTGATGTTGGAGTGGCTTaGGAACCCTGGCAGAGCCTGGATGGACCCAGGGTTAAGAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: TQGASEVGSIDVGVA*EPWQSLDGPRVKKA Trigger: AGCCTTCTTAACCCTGGGTCCATCCAGGCTCTGCCAGGGTTCCAAAGCCACTCCAACATCAATTGAACCAACCTCACTCGCACCCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CAA 90 bp | CAGCAGGAGGGCGGTCTTGTAGGGATTGCTGTGGGCAGGACTGACTaGGTAGCCTTTGGTGAGTTTGGAGAAATATGGTGTGGGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: QQEGGLVGIAVGRTD*VAFGEFGEIWCGCL Trigger: CAAGCACCCACACCATATTTCTCCAAACTCACCAAAGGCTACCAAGTCAGTCCTGCCCACAGCAATCCCTACAAGACCGCCCTCCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CAA 90 bp | CCAGGGCACAGGAGGCAGGATGGCTTCCCTAGTACATACAGTTCCTaGCCTTGGTTCCTGGTGACTTTCAGAAGGGAGCAGTGTGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: PGHRRQDGFPSTYSS*PWFLVTFRREQCEC Trigger: ACACTCACACTGCTCCCTTCTGAAAGTCACCAGGAACCAAGGCAAGGAACTGTATGTACTAGGGAAGCCATCCTGCCTCCTGTGCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR GCA 90 bp | CATTTCTCAGACAACAGCAGCCATTGGATCGGGGCCCAGATGCGAAGGCTCAGAGGCTGGATAGCTGGGTaGTGGGGGTTAATCAATCAG | + |
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Preference number: 2 (lower is better) Translates to: HFSDNSSHWIGAQMRRLRGWIAG*WGLINQ Trigger: CTGATTGATTAACCCCCAGCACCCAGCTATCCAGCC...TCTGAGCCTTCGCATCTGGGCCCCGATCCAATGGCTGCTGTTGTCTGAGAAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR TCA 90 bp | ATAGCTGAGCATCCCCCAGGGCTGCCTCTAGTGAATCAGGCTCTGCAGGAAGGGCTTGGTAGCCTTTGGTaGGTTTGGAGAAATATGGTG | + |
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Preference number: 2 (lower is better) Translates to: IAEHPPGLPLVNQALQEGLGSLW*VWRNMV Trigger: CACCATATTTCTCCAAACTCACCAAAGGCTACCAAG...CCCTTCCTGCAGAGCCTGATTCACTAGAGGCAGCCCTGGGGGATGCTCAGCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGGGTCTTACTCTGCCACACAGTCCTCAGAATGCAGCTCTGGACCATCTGAACACAGGACACTGTaGGTGGTGCATGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: RTGSYSATQSSECSSGPSEHRTL*VVHVCV Trigger: CACACACACATGCACCACGCACAGTGTCCTGTGTTC...AGATGGTCCAGAGCTGCATTCTGAGGACTGTGTGGCAGAGTAAGACCCTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CAA 90 bp | CTAACATCTGTTCTCACCAAAACATTTCTCAGACAACAGCAGCCATaGGATCGGGGCCCAGATGCGAAGGCTCAGAGTGCCAAGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LTSVLTKTFLRQQQP*DRGPDAKAQSAKAS Trigger: GGAAGCCTTGGCACTCTGAGCCTTCGCATCTGGGCCCCGATCCAATGGCTGCTGTTGTCTGAGAAATGTTTTGGTGAGAACAGATGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR TCA 90 bp | TTTGGTCCTCTGACTTCCAGGCTGCTTTGGAGCAAGGAAGGCAGACTTGTTAAGACGGATGGGGAATGCTaGGAGGGGTTTCAATCCTTG | + |
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Preference number: 2 (lower is better) Translates to: FGPLTSRLLWSKEGRLVKTDGEC*EGFQSL Trigger: CAAGGATTGAAACCCCTCTCAGCATTCCCCATCCGT...CTTAACAAGTCTGCCTTCCTTGCTCCAAAGCAGCCTGGAAGTCAGAGGACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR CCA 90 bp | CATTTCTCAGACAACAGCAGCCATTGGATCGGGGCCCAGATGCGAAGGCTCAGACACTCAGTGAAATCATaGTGTGGCTCAGACATAGAG | + |
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Preference number: 2 (lower is better) Translates to: HFSDNSSHWIGAQMRRLRHSVKS*CGSDIE Trigger: CTCTATGTCTGAGCCACACCATGATTTCACTGAGTG...TCTGAGCCTTCGCATCTGGGCCCCGATCCAATGGCTGCTGTTGTCTGAGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTACATACAGTTCCTTGCCTTGGTTCCTGGTGACTTTCAGAAGGGAGCAGTCAGTATGGAAGAGCTaGAGGACCAGGCAGCTGACT | + |
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Preference number: 2 (lower is better) Translates to: PSTYSSLPWFLVTFRREQSVWKS*RTRQLT Trigger: AGTCAGCTGCCTGGTCCTCCAGCTCTTCCATACTGA...CTGCTCCCTTCTGAAAGTCACCAGGAACCAAGGCAAGGAACTGTATGTACTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR CCA 90 bp | TTTGGTCCTCTGACTTCCAGGCTGCTTTGGAGCAAGGAAGGCAGACTTGTTAAGTCACAGAGCCCATTTTaGCTTCCTCGGGGAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: FGPLTSRLLWSKEGRLVKSQSPF*LPRGRT Trigger: TGTTCTTCCCCGAGGAAGCCAAAATGGGCTCTGTGA...CTTAACAAGTCTGCCTTCCTTGCTCCAAAGCAGCCTGGAAGTCAGAGGACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTTTAATAGTAATACCACATTCAGACATGACTGAAACTCTGTGGGGAAACCGCTCTCCAGGGAGCTaGGTCAGTGTCACATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TPLIVIPHSDMTETLWGNRSPGS*VSVTCV Trigger: CACACATGTGACACTGACCCAGCTCCCTGGAGAGCG...GTTTCCCCACAGAGTTTCAGTCATGTCTGAATGTGGTATTACTATTAAAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| 3UTR GCA 72 bp | AGGACACTGTGCGTGGTGCATGTGTGTGTGTGTGTGTaGGCGCGCGCGCTCATGCGCGCGCCCACACAGGGT | + |
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Preference number: 3 (lower is better) Translates to: RTLCVVHVCVCV*ARALMRAPTQG Trigger: ACCCTGTGTGGGCGCGCGCATGAGCGCGCGCGCGCACACACACACACACACATGCACCACGCACAGTGTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| 3UTR CCA 72 bp | TCCTTCCAATGCTGCATGCCAGGCAGCCGAGACCAATaGATTGGAGCTGGCACGCGGGGTGACACCTCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: SFQCCMPGSRDQ*IGAGTRGDTSS Trigger: CGAGGAGGTGTCACCCCGCGTGCCAGCTCCAATCCATTGGTCTCGGCTGCCTGGCATGCAGCATTGGAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR TCA 72 bp | CAGCCGAGACCAATGGATTGGAGCTGGCACGCGGGGTaGCACCTCCTCGCCATCCGTGTAGCAGATGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QPRPMDWSWHAG*HLLAIRVADEA Trigger: AGCTTCATCTGCTACACGGATGGCGAGGAGGTGTCACCCCGCGTGCCAGCTCCAATCCATTGGTCTCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR CCA 72 bp | ACTCTGTGGGGAAACTGTGAGGGTGAGCACACAGTGTaGCAGCCTCCTCCTCTGAGCCCACTGGCAGTGACG | + |
|
Preference number: 3 (lower is better) Translates to: TLWGNCEGEHTV*QPPPLSPLAVT Trigger: CGTCACTGCCAGTGGGCTCAGAGGAGGAGGCTGCCACACTGTGTGCTCACCCTCACAGTTTCCCCACAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| 3UTR GCA 72 bp | TCAATCAGGGTGTGGAACACAGGACACTGTGCGTGGTaGATGTGTGTGTGTGTGTGTGCGCGCGCGCGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SIRVWNTGHCAW*MCVCVCARARS Trigger: TGAGCGCGCGCGCGCACACACACACACACACATGCACCACGCACAGTGTCCTGTGTTCCACACCCTGATTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR TCA 72 bp | TCGCCTCAGTATGGAAGAGCTGGAGGACCAGGCAGCTaGCTCACAGAGCCCATTTTGGCTTCCTCGGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SPQYGRAGGPGS*LTEPILASSGK Trigger: CTTCCCCGAGGAAGCCAAAATGGGCTCTGTGAGTCAGCTGCCTGGTCCTCCAGCTCTTCCATACTGAGGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR CCA 72 bp | CTTAGGCCTGGAGCTGGGCAAAGGTTTTCGGCAGCGTaGAACACTCCATCTCGCTTCAGCCTGCTGACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LRPGAGQRFSAA*NTPSRFSLLTF Trigger: GAAGGTCAGCAGGCTGAAGCGAGATGGAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGCTCCAGGCCTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTCCTCTGACTTCCAGGCTGCTTTGGAGCAAGGAAGGCAGACTTGTTAAGGCCGAGACCAATGGATaGGAGCTGGCACGCGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FGPLTSRLLWSKEGRLVKAETNG*ELARGV Trigger: CACCCCGCGTGCCAGCTCCAATCCATTGGTCTCGGC...CTTAACAAGTCTGCCTTCCTTGCTCCAAAGCAGCCTGGAAGTCAGAGGACCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR TCA 72 bp | GAGCTGGGTCAGTGTCACATGTGTGTGAGGAAGGCCTaGCCAATGAGAGGCAGCCTGGGATGGAGAGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ELGQCHMCVRKA*PMRGSLGWRVV Trigger: AACCACTCTCCATCCCAGGCTGCCTCTCATTGGTCAGGCCTTCCTCACACACATGTGACACTGACCCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| 3UTR TCA 72 bp | CCATGCATGGCCAGCCTCAGAAAACCTCCAGTGAGATaGAAGTGGGACCTAGCACAGACTGCTCCCGGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PCMASLRKPPVR*KWDLAQTAPGL Trigger: TAGCCCGGGAGCAGTCTGTGCTAGGTCCCACTTTCATCTCACTGGAGGTTTTCTGAGGCTGGCCATGCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR GCA 72 bp | GGGTTAATCAATCAGGGTGTGGAACACAGGACACTGTaGGTGGTGCATGTGTGTGTGTGTGTGTGCGCGCGC | + |
|
Preference number: 3 (lower is better) Translates to: GLINQGVEHRTL*VVHVCVCVCAR Trigger: GCGCGCGCACACACACACACACACATGCACCACGCACAGTGTCCTGTGTTCCACACCCTGATTGATTAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR CCA 72 bp | CTGACGAAGTGGGACCTCGCCTCAGTATGGAAGAGCTaGAGGACCAGGCAGCTGACTCACAGAGCCCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTKWDLASVWKS*RTRQLTHRAHF Trigger: AAAATGGGCTCTGTGAGTCAGCTGCCTGGTCCTCCAGCTCTTCCATACTGAGGCGAGGTCCCACTTCGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGGTTTCAATCCTTGACCTTGGCCCAGGCTTTCTCCTTCTCTGGCTTGTTGCCAAGCAGGGACCTTaGGTGGCAGCAGAGAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RGVSILDLGPGFLLLWLVAKQGP*VAAERK Trigger: CTTCCTCTCTGCTGCCACCAAAGGTCCCTGCTTGGC...AACAAGCCAGAGAAGGAGAAAGCCTGGGCCAAGGTCAAGGATTGAAACCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR TCA 72 bp | GGACGGATGGGGAATGCTGAGAGGGGTTTCAATCCTTaGCCTTGGCCCAGGCTTTCTCCTTCTCTGGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GRMGNAERGFNP*PWPRLSPSLAC Trigger: ACAAGCCAGAGAAGGAGAAAGCCTGGGCCAAGGTCAAGGATTGAAACCCCTCTCAGCATTCCCCATCCGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR CCA 72 bp | TTGATGTTGGAGTGGCTTTGGAACCCTGGCAGAGCCTaGATGGACCCAGGGTTAAGAAGGCTGGTAGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LMLEWLWNPGRA*MDPGLRRLVGY Trigger: GTACCCTACCAGCCTTCTTAACCCTGGGTCCATCCAGGCTCTGCCAGGGTTCCAAAGCCACTCCAACATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR CCA 72 bp | AGGGTGCGAGTGAGGTTGGTTCAATTGATGTTGGAGTaGCTTTGGAACCCTGGCAGAGCCTGGATGGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: RVRVRLVQLMLE*LWNPGRAWMDP Trigger: TGGGTCCATCCAGGCTCTGCCAGGGTTCCAAAGCCACTCCAACATCAATTGAACCAACCTCACTCGCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR CCA 72 bp | TGGACCATCTGTCCTCTGCAGACAGAAGGACAGCTCTaGGTCATACCCTCTGCCTCTTTGGCAGAGCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: WTICPLQTEGQL*VIPSASLAELQ Trigger: CTGTAGCTCTGCCAAAGAGGCAGAGGGTATGACCCAGAGCTGTCCTTCTGTCTGCAGAGGACAGATGGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR TCA 72 bp | CCTTTGGTGAGTTTGGAGAAATATGGTGTGGGTGCTTaGAGTGGGGCTGACGAAGTGGGACCTCGCCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PLVSLEKYGVGA*SGADEVGPRLS Trigger: ACTGAGGCGAGGTCCCACTTCGTCAGCCCCACTTCAAGCACCCACACCATATTTCTCCAAACTCACCAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR GCA 72 bp | TCTGCAGACAGAAGGACAGCTCTGGGTCATACCCTCTaGCTCTTTGGCAGAGCTACAGTCTCTAGGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SADRRTALGHTL*LFGRATVSRRR Trigger: CCTTCTCCTAGAGACTGTAGCTCTGCCAAAGAGGCAGAGGGTATGACCCAGAGCTGTCCTTCTGTCTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR GCA 72 bp | AGGACAGGGTCTTACTCTGCCACACAGTCCTCAGAATaGAGCTCTGGACCATCTGTCCTCTGCAGACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RTGSYSATQSSE*SSGPSVLCRQK Trigger: CTTCTGTCTGCAGAGGACAGATGGTCCAGAGCTGCATTCTGAGGACTGTGTGGCAGAGTAAGACCCTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR GCA 72 bp | TCCCGCACCCACAGCAGACGCCACTCATCCGTCACCTaGTCCTTTCTGCTGAGCTTAGATCTGACCTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: SRTHSRRHSSVT*SFLLSLDLTLI Trigger: TATTAAGGTCAGATCTAAGCTCAGCAGAAAGGAGCAGGTGACGGATGAGTGGCGTCTGCTGTGGGTGCGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR CCA 72 bp | CGAGTGAGGTTGGTTCAATTGATGTTGGAGTGGCTTTaGAACCCTGGCAGAGCCTGGATGGACCCAGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: RVRLVQLMLEWL*NPGRAWMDPGL Trigger: TAACCCTGGGTCCATCCAGGCTCTGCCAGGGTTCCAAAGCCACTCCAACATCAATTGAACCAACCTCACTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR CCA 72 bp | GTTGGTTCAATTGATGTTGGAGTGGCTTTGGAACCCTaGCAGAGCCTGGATGGACCCAGGGTTAAGAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VGSIDVGVALEP*QSLDGPRVKKA Trigger: AGCCTTCTTAACCCTGGGTCCATCCAGGCTCTGCCAGGGTTCCAAAGCCACTCCAACATCAATTGAACCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGACAGGGTCTTACTCTGCCACACAGTCCTCAGAATGCAGCTCTGGACCATCTATACCCTCTGCCTCTTaGGCAGAGCTACAGTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: RTGSYSATQSSECSSGPSIPSAS*AELQSL Trigger: TAGAGACTGTAGCTCTGCCAAAGAGGCAGAGGGTAT...AGATGGTCCAGAGCTGCATTCTGAGGACTGTGTGGCAGAGTAAGACCCTGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR TCA 72 bp | TTAGCTGAGGAAATCTCTCTGTCCCTTGTGGAGAAGTaGGGATTCAGAGGACGGATGGGGAATGCTGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LAEEISLSLVEK*GFRGRMGNAER Trigger: CCTCTCAGCATTCCCCATCCGTCCTCTGAATCCTCACTTCTCCACAAGGGACAGAGAGATTTCCTCAGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR TCA 72 bp | CAGTGCAGAACTCTGGAGAGCAACCAGCTTCTTAGCTaGGGAAATCTCTCTGTCCCTTGTGGAGAAGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QCRTLESNQLLS*GNLSVPCGEVR Trigger: CCTCACTTCTCCACAAGGGACAGAGAGATTTCCTCAGCTAAGAAGCTGGTTGCTCTCCAGAGTTCTGCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR CCA 72 bp | AGATGTTTAGGGACCCCACATTTCTGGCTGGATAGCTaGGTGCTGGGGGTTAATCAATCAGGGTGTGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: RCLGTPHFWLDS*VLGVNQSGCGT Trigger: TGTTCCACACCCTGATTGATTAACCCCCAGCACCCAGCTATCCAGCCAGAAATGTGGGGTCCCTAAACATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR CCA 72 bp | GTGTGTGTTGCTATGAGGAAGCACAGATCCCACATTTaGTCCTCTGACTTCCAGGCTGCTTTGGAGCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VCVAMRKHRSHI*SSDFQAALEQG Trigger: TCCTTGCTCCAAAGCAGCCTGGAAGTCAGAGGACCAAATGTGGGATCTGTGCTTCCTCATAGCAACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR TCA 72 bp | GTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTTGCTATaGGGAAGCACAGATCCCACATTTGGTCCTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVVCVLL*GSTDPTFGPLT Trigger: AGTCAGAGGACCAAATGTGGGATCTGTGCTTCCTCATAGCAACACACACACCACACACACACACACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR TCA 72 bp | TCCCTAGTACATACAGTTCCTTGCCTTGGTTCCTGGTaGCTTTCAGAAGGGAGCAGTGTGAGTGTCTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLVHTVPCLGSW*LSEGSSVSVCV Trigger: CACACAGACACTCACACTGCTCCCTTCTGAAAGTCACCAGGAACCAAGGCAAGGAACTGTATGTACTAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR GCA 72 bp | CTGAGCTTAGATCTGACCTTAATATCCTTCCAATGCTaGATGCCAGGCAGCCGAGACCAATGGATTGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSLDLTLISFQC*MPGSRDQWIGA Trigger: AGCTCCAATCCATTGGTCTCGGCTGCCTGGCATGCAGCATTGGAAGGATATTAAGGTCAGATCTAAGCTCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR GCA 72 bp | CTGCTGAGCTTAGATCTGACCTTAATATCCTTCCAATaGTGCATGCCAGGCAGCCGAGACCAATGGATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLSLDLTLISFQ*CMPGSRDQWIG Trigger: TCCAATCCATTGGTCTCGGCTGCCTGGCATGCAGCATTGGAAGGATATTAAGGTCAGATCTAAGCTCAGCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR CCA 72 bp | GTACTAGGAAGGCAGTTAAGCCACTCAGTGAAATCATaGTGTGGCTCAGACATAGAGTGCTTGTCTAGCACG | + |
|
Preference number: 3 (lower is better) Translates to: VLGRQLSHSVKS*CGSDIECLSST Trigger: CGTGCTAGACAAGCACTCTATGTCTGAGCCACACCATGATTTCACTGAGTGGCTTAACTGCCTTCCTAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| 3UTR CCA 72 bp | ATAGTAATACCACATTCAGACATGACTGAAACTCTGTaGGGAAACTGTGAGGGTGAGCACACAGTGTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IVIPHSDMTETL*GNCEGEHTVWQ Trigger: CTGCCACACTGTGTGCTCACCCTCACAGTTTCCCCACAGAGTTTCAGTCATGTCTGAATGTGGTATTACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCCTCCTCCTCTGAGCCCACTGGCAGTGACGCTCTCCAGGGAGCTGGGTCAGGCTGCCCCGCCCCATaGCATAGAAGGCTATGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AASSSEPTGSDALQGAGSGCPAP*HRRLWV Trigger: AACCCATAGCCTTCTATGCCATGGGGCGGGGCAGCC...TGACCCAGCTCCCTGGAGAGCGTCACTGCCAGTGGGCTCAGAGGAGGAGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR GCA 90 bp | AGTGACGCTCTCCAGGGAGCTGGGTCAGTGTCACATGTGTGTGAGGAAGGCCTGGAGCGTCCCCAGGGCTaGCCCGCCCCATGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDALQGAGSVSHVCEEGLERPQG*PAPWHR Trigger: TCTATGCCATGGGGCGGGGCAGCCCTGGGGACGCTC...CAGGCCTTCCTCACACACATGTGACACTGACCCAGCTCCCTGGAGAGCGTCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGCCTTAGGCCTGGAGCTGGGCAAAGGTTTTCGGCAGCGTGGAACACTCGAGGCTTGGCGGGGATaGGCGGCCTGGGTCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GRALGLELGKGFRQRGTLEAWRG*AAWVWM Trigger: CATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTC...GAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGCTCCAGGCCTAAGGCTCTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGCCTTAGGCCTGGAGCTGGGCAAAGGTTTTCGGCAGCGTGGAACACTCGAGGAAGCTGAGGCTTaGCGGGGATGGGCGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRALGLELGKGFRQRGTLEEAEA*RGWAAW Trigger: CCAGGCCGCCCATCCCCGCCAAGCCTCAGCTTCCTC...GAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGCTCCAGGCCTAAGGCTCTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCCTCCTCCTCTGAGCCCACTGGCAGTGACGCTCTCCAGGGAGCTGGGTCACGGCCTGGGTCTGGATaGCTGGGATGTTTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AASSSEPTGSDALQGAGSRPGSG*LGCFLC Trigger: ACAGAGAAAACATCCCAGGCATCCAGACCCAGGCCG...TGACCCAGCTCCCTGGAGAGCGTCACTGCCAGTGGGCTCAGAGGAGGAGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGGTCAGTGTCACATGTGTGTGAGGAAGGCCTGACCAATGAGAGGCAGGAGCGTCCCCAGGGCTaGCCCGCCCCATGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GAGSVSHVCEEGLTNERQERPQG*PAPWHR Trigger: TCTATGCCATGGGGCGGGGCAGCCCTGGGGACGCTC...CTGCCTCTCATTGGTCAGGCCTTCCTCACACACATGTGACACTGACCCAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGCAAAGGTTTTCGGCAGCGTGGAACACTCCATCTCGCTTCAGCCTGCTGAGGCTTGGCGGGGATaGGCGGCCTGGGTCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SWAKVFGSVEHSISLQPAEAWRG*AAWVWM Trigger: CATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTC...AGCAGGCTGAAGCGAGATGGAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| 3UTR CAA 72 bp | TCCAATGCTGCATGCCAGGCAGCCGAGACCAATGGATaGGAGCTGGCACGCGGGGTGACACCTCCTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SNAACQAAETNG*ELARGVTPPRH Trigger: ATGGCGAGGAGGTGTCACCCCGCGTGCCAGCTCCAATCCATTGGTCTCGGCTGCCTGGCATGCAGCATTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR TCA 90 bp | GAATGTCCAGGAAGAGCCTTAGGCCTGGAGCTGGGCAAAGGTTTTCGGCAGCGTGGCAGTTCCTGGGGCTaGGGCAGAGACCACCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ECPGRALGLELGKGFRQRGSSWG*GRDHRV Trigger: CACACGGTGGTCTCTGCCTCAGCCCCAGGAACTGCC...ACGCTGCCGAAAACCTTTGCCCAGCTCCAGGCCTAAGGCTCTTCCTGGACATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGCCTTAGGCCTGGAGCTGGGCAAAGGTTTTCGGCAGCGTGGAACACTCCGGCCTGGGTCTGGATaGCTGGGATGTCGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRALGLELGKGFRQRGTLRPGSG*LGCRLL Trigger: CAGAAGGCGACATCCCAGGCATCCAGACCCAGGCCG...GAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGCTCCAGGCCTAAGGCTCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCAGCCTACCCCAGCTAAGGGAGAAGCACTTGGCAAAGGGAGTCCGTGTCGGCTGCCCCGCCCCATaGCATAGAAGGCTATGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPQLREKHLAKGVRVGCPAP*HRRLWV Trigger: AACCCATAGCCTTCTATGCCATGGGGCGGGGCAGCC...GACACGGACTCCCTTTGCCAAGTGCTTCTCCCTTAGCTGGGGTAGGCTGGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR TCA 90 bp | GCAGTGACGCTCTCCAGGGAGCTGGGTCAGTGTCACATGTGTGTGAGGAAGGCCAAAGAGGGGCAGTCTTaGGCAAGAGCCAGTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVTLSRELGQCHMCVRKAKEGQS*ARASGP Trigger: AGGCCCACTGGCTCTTGCTCAAGACTGCCCCTCTTT...GGCCTTCCTCACACACATGTGACACTGACCCAGCTCCCTGGAGAGCGTCACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGGGTCAGTGTCACATGTGTGTGAGGAAGGCCTGACCAATGAGAGGCAGGTTGGAGGAGCAGGCTaGGCTGGGTGTCTGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGSVSHVCEEGLTNERQVGGAG*AGCLGP Trigger: AGGACCCAGACACCCAGCTCAGCCTGCTCCTCCAAC...CTGCCTCTCATTGGTCAGGCCTTCCTCACACACATGTGACACTGACCCAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCCTCCTCCTCTGAGCCCACTGGCAGTGACGCTCTCCAGGGAGCTGGGTCATGTTCCTTCATAACTTaGATGCTGGGCCTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AASSSEPTGSDALQGAGSCSFIT*MLGLLP Trigger: TGGGAGCAGGCCCAGCATGCAAGTTATGAAGGAACA...TGACCCAGCTCCCTGGAGAGCGTCACTGCCAGTGGGCTCAGAGGAGGAGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| 3UTR CAA 72 bp | GCGCGCCCACACAGGGTGCGAGTGAGGTTGGTTCAATaGATGTTGGAGTGGCTTTGGAACCCTGGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARPHRVRVRLVQ*MLEWLWNPGRA Trigger: GGCTCTGCCAGGGTTCCAAAGCCACTCCAACATCAATTGAACCAACCTCACTCGCACCCTGTGTGGGCGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR TCA 90 bp | CCTCCTCCTCTGAGCCCACTGGCAGTGACGCTCTCCAGGGAGCTGGGTCAGTGTGATGAAGTAGCTTCATaGTTCCCTTGGGGGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPPLSPLAVTLSRELGQCDEVAS*FPWGHG Trigger: ACCATGCCCCCAAGGGAATCATGAAGCTACTTCATC...ACACTGACCCAGCTCCCTGGAGAGCGTCACTGCCAGTGGGCTCAGAGGAGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCACGTGAATGTCCAGGAAGAGCCTTAGGCCTGGAGCTGGGCAAAGGTTTTTGCGCGAGGAGGAAGTaGCGGCAGCAGGTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPRECPGRALGLELGKGFCARRK*RQQVWL Trigger: GAGCCAGACCTGCTGCCGTCACTTCCTCCTCGCGCA...AAAACCTTTGCCCAGCTCCAGGCCTAAGGCTCTTCCTGGACATTCACGTGGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR TCA 90 bp | GAGCCCACTGGCAGTGACGCTCTCCAGGGAGCTGGGTCAGTGTCACATGTGTGTTTAATGGGTGGGGCCTaGTGCAGTCGTGAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EPTGSDALQGAGSVSHVCLMGGA*CSREAG Trigger: TCCTGCTTCACGACTGCATCAGGCCCCACCCATTAA...ACACACATGTGACACTGACCCAGCTCCCTGGAGAGCGTCACTGCCAGTGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGGCAAAGGTTTTCGGCAGCGTGGAACACTCCATCTCGCTTCAGCCTGCTGCCTTACCTGGCCTCTTaGGATAGGCCTGGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGQRFSAAWNTPSRFSLLPYLAS*DRPGPA Trigger: TGCTGGTCCAGGCCTATCTCAAGAGGCCAGGTAAGG...CAGCAGGCTGAAGCGAGATGGAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCAAAGGTTTTCGGCAGCGTGGAACACTCCATCTCGCTTCAGCCTGCTGTTGAGCAAGAGCCAGTaGGCCTGGGTCTTCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: AGQRFSAAWNTPSRFSLLLSKSQ*AWVFWT Trigger: GGTCCAGAAGACCCAGGCCCACTGGCTCTTGCTCAA...CAGCAGGCTGAAGCGAGATGGAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGAGCCTTAGGCCTGGAGCTGGGCAAAGGTTTTCGGCAGCGTGGAACATTGAGCAAGAGCCAGTaGGCCTGGGTCTTCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PGRALGLELGKGFRQRGTLSKSQ*AWVFWT Trigger: GGTCCAGAAGACCCAGGCCCACTGGCTCTTGCTCAA...TGTTCCACGCTGCCGAAAACCTTTGCCCAGCTCCAGGCCTAAGGCTCTTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGGGTTTCAATCCTTGACCTTGGCCCAGGCTTTCTCCTTCTCTGGCTTGTTGGCAGTTCCTGGGGCTaGGGCAGAGACCACCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGVSILDLGPGFLLLWLVGSSWG*GRDHRV Trigger: CACACGGTGGTCTCTGCCTCAGCCCCAGGAACTGCC...AACAAGCCAGAGAAGGAGAAAGCCTGGGCCAAGGTCAAGGATTGAAACCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR TCA 90 bp | ATGACTGAAACTCTGTGGGGAAACTGTGAGGGTGAGCACACAGTGTGGCAGCCTGTTGGAGGAGCAGGCTaGGCTGGGTGTCTGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MTETLWGNCEGEHTVWQPVGGAG*AGCLGP Trigger: AGGACCCAGACACCCAGCTCAGCCTGCTCCTCCAAC...AGGCTGCCACACTGTGTGCTCACCCTCACAGTTTCCCCACAGAGTTTCAGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGAGCCCACTGGCAGTGACGCTCTCCAGGGAGCTGGGTCAGTGTCACATCTTGCATGCTGGGCCTaGTCCCACAACTCAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSEPTGSDALQGAGSVSHLACWA*SHNSSS Trigger: AGAACTTGAGTTGTGGGAGCAGGCCCAGCATGCAAG...ATGTGACACTGACCCAGCTCCCTGGAGAGCGTCACTGCCAGTGGGCTCAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR GCA 90 bp | TCAGACATGACTGAAACTCTGTGGGGAAACTGTGAGGGTGAGCACACAGTGTGGCCTAGAGGCTGGGGCTaGAGCAGCCTCTCGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SDMTETLWGNCEGEHTVWPRGWG*SSLSAS Trigger: GGAAGCCGAGAGGCTGCTGCAGCCCCAGCCTCTAGG...CCACACTGTGTGCTCACCCTCACAGTTTCCCCACAGAGTTTCAGTCATGTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | GGAGTGGCTTTGGAACCCTGGCAGAGCCTGGATGGACCCAGGGTTAAGAAGGCTATTCCCTTGGGGGCATaGTTGGGCCAAGCAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: GVALEPWQSLDGPRVKKAIPLGA*LGQAEL Trigger: GAGTTCTGCTTGGCCCAACCATGCCCCCAAGGGAAT...AGCCTTCTTAACCCTGGGTCCATCCAGGCTCTGCCAGGGTTCCAAAGCCACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR CCA 90 bp | AGTGACGCTCTCCAGGGAGCTGGGTCAGTGTCACATGTGTGTGAGGAAGGCCTGCCACAACTCAAGTTCTaGCATCTCCCCTGGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDALQGAGSVSHVCEEGLPQLKF*HLPWVR Trigger: CCTGACCCAGGGGAGATGCCAGAACTTGAGTTGTGG...CAGGCCTTCCTCACACACATGTGACACTGACCCAGCTCCCTGGAGAGCGTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCAAAGGTTTTCGGCAGCGTGGAACACTCCATCTCGCTTCAGCCTGCTGGCTGAGCTGGGTGTCTaGGTCCTGTCTTTTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGQRFSAAWNTPSRFSLLAELGV*VLSFAS Trigger: GGAAGCAAAAGACAGGACCCAGACACCCAGCTCAGC...CAGCAGGCTGAAGCGAGATGGAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | CAATTGATGTTGGAGTGGCTTTGGAACCCTGGCAGAGCCTGGATGGACCCAGGGAGGAGCAGGCTGAGCTaGGTGTCTGGGTCCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLMLEWLWNPGRAWMDPGRSRLS*VSGSCL Trigger: AAGACAGGACCCAGACACCCAGCTCAGCCTGCTCCT...CCCTGGGTCCATCCAGGCTCTGCCAGGGTTCCAAAGCCACTCCAACATCAATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR CCA 90 bp | CGTGAATGTCCAGGAAGAGCCTTAGGCCTGGAGCTGGGCAAAGGTTTTCGGCAGAGGAGCAGGCTGAGCTaGGTGTCTGGGTCCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RECPGRALGLELGKGFRQRSRLS*VSGSCL Trigger: AAGACAGGACCCAGACACCCAGCTCAGCCTGCTCCT...CTGCCGAAAACCTTTGCCCAGCTCCAGGCCTAAGGCTCTTCCTGGACATTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | GAAACTCTGTGGGGAAACTGTGAGGGTGAGCACACAGTGTGGCAGCCTCCTCCTCTGGGTCTGGATGCCTaGGATGTCGCCTTCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETLWGNCEGEHTVWQPPPLGLDA*DVAFCW Trigger: CCAACAGAAGGCGACATCCCAGGCATCCAGACCCAG...AGGAGGAGGCTGCCACACTGTGTGCTCACCCTCACAGTTTCCCCACAGAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | CGTGAATGTCCAGGAAGAGCCTTAGGCCTGGAGCTGGGCAAAGGTTTTCGGCAGATTCCCTTGGGGGCATaGTTGGGCCAAGCAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RECPGRALGLELGKGFRQIPLGA*LGQAEL Trigger: GAGTTCTGCTTGGCCCAACCATGCCCCCAAGGGAAT...CTGCCGAAAACCTTTGCCCAGCTCCAGGCCTAAGGCTCTTCCTGGACATTCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGCAAAGGTTTTCGGCAGCGTGGAACACTCCATCTCGCTTCAGCCTGCTCCACAACTCAAGTTCTaGCATCTCCCCTGGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SWAKVFGSVEHSISLQPAPQLKF*HLPWVR Trigger: CCTGACCCAGGGGAGATGCCAGAACTTGAGTTGTGG...AGCAGGCTGAAGCGAGATGGAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | CAAAGGTTTTCGGCAGCGTGGAACACTCCATCTCGCTTCAGCCTGCTGACCTTCAAGAGCCAGTGGGCCTaGGTCTTCTGGACCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRFSAAWNTPSRFSLLTFKSQWA*VFWTHA Trigger: AGCATGGGTCCAGAAGACCCAGGCCCACTGGCTCTT...GAAGGTCAGCAGGCTGAAGCGAGATGGAGTGTTCCACGCTGCCGAAAACCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCAAAGGTTTTCGGCAGCGTGGAACACTCCATCTCGCTTCAGCCTGCTGCTGGTGATGAAGCCATaGAACCAAAGAGGGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGQRFSAAWNTPSRFSLLLVMKP*NQRGAV Trigger: GACTGCCCCTCTTTGGTTCCATGGCTTCATCACCAG...CAGCAGGCTGAAGCGAGATGGAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | GCAGTGACGCTCTCCAGGGAGCTGGGTCAGTGTCACATGTGTGTGAGGAAGGCCTGGCATAGAAGGCTATaGGTTCATCAGGCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVTLSRELGQCHMCVRKAWHRRL*VHQAPG Trigger: ACCAGGAGCCTGATGAACCCATAGCCTTCTATGCCA...GGCCTTCCTCACACACATGTGACACTGACCCAGCTCCCTGGAGAGCGTCACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGGTTTTCGGCAGCGTGGAACACTCCATCTCGCTTCAGCCTGCTGACCTTCTTAATGGGTGGGGCCTaGTGCAGTCGTGAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRFSAAWNTPSRFSLLTFLMGGA*CSREAG Trigger: TCCTGCTTCACGACTGCATCAGGCCCCACCCATTAA...GAAGGTCAGCAGGCTGAAGCGAGATGGAGTGTTCCACGCTGCCGAAAACCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR TCA 90 bp | ATGAAGGACAGGGTCTTACTCTGCCACACAGTCCTCAGAATGCAGCTCTGGACCCCTTACCTGGCCTCTTaGGATAGGCCTGGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MKDRVLLCHTVLRMQLWTPYLAS*DRPGPA Trigger: TGCTGGTCCAGGCCTATCTCAAGAGGCCAGGTAAGG...GGTCCAGAGCTGCATTCTGAGGACTGTGTGGCAGAGTAAGACCCTGTCCTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCCTGAGGCAGTTGCTTCATGCCAAGCACTGGGCCAGTACTTTAGAGATAAGAGCCAGTGGGCCTaGGTCTTCTGGACCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPEAVASCQALGQYFRDKSQWA*VFWTHA Trigger: AGCATGGGTCCAGAAGACCCAGGCCCACTGGCTCTT...ATCTCTAAAGTACTGGCCCAGTGCTTGGCATGAAGCAACTGCCTCAGGGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR TCA 90 bp | CGTGAATGTCCAGGAAGAGCCTTAGGCCTGGAGCTGGGCAAAGGTTTTCGGCAGGATGAAGTAGCTTCATaGTTCCCTTGGGGGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RECPGRALGLELGKGFRQDEVAS*FPWGHG Trigger: ACCATGCCCCCAAGGGAATCATGAAGCTACTTCATC...CTGCCGAAAACCTTTGCCCAGCTCCAGGCCTAAGGCTCTTCCTGGACATTCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR TCA 90 bp | GTCACCTGCTCCTTTCTGCTGAGCTTAGATCTGACCTTAATATCCTTCCAATGCTGCGCGAGGAGGAAGTaGCGGCAGCAGGTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTCSFLLSLDLTLISFQCCARRK*RQQVWL Trigger: GAGCCAGACCTGCTGCCGTCACTTCCTCCTCGCGCA...GCATTGGAAGGATATTAAGGTCAGATCTAAGCTCAGCAGAAAGGAGCAGGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGAGCCCACTGGCAGTGACGCTCTCCAGGGAGCTGGGTCAGTGTCACATGTCAGGTTCATTGGCTaGAAGGTGTTGAAGGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSEPTGSDALQGAGSVSHVRFIG*KVLKVD Trigger: ATCAACCTTCAACACCTTCCAGCCAATGAACCTGAC...ATGTGACACTGACCCAGCTCCCTGGAGAGCGTCACTGCCAGTGGGCTCAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | ATGAAGGACAGGGTCTTACTCTGCCACACAGTCCTCAGAATGCAGCTCTGGACCTTCTGGCATCTCCCCTaGGTCAGGTTCATTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MKDRVLLCHTVLRMQLWTFWHLP*VRFIGW Trigger: CCAGCCAATGAACCTGACCCAGGGGAGATGCCAGAA...GGTCCAGAGCTGCATTCTGAGGACTGTGTGGCAGAGTAAGACCCTGTCCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR CCA 90 bp | GAAACTCTGTGGGGAAACTGTGAGGGTGAGCACACAGTGTGGCAGCCTCCTCCTTCTGGACCCATGCTCTaGTCTCAGCTTGCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: ETLWGNCEGEHTVWQPPPSGPML*SQLAMT Trigger: TGTCATTGCAAGCTGAGACCAGAGCATGGGTCCAGA...AGGAGGAGGCTGCCACACTGTGTGCTCACCCTCACAGTTTCCCCACAGAGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTGAGTCCACGTGAATGTCCAGGAAGAGCCTTAGGCCTGGAGCTGGGCAAACTGGTGATGAAGCCATaGAACCAAAGAGGGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLSPRECPGRALGLELGKLVMKP*NQRGAV Trigger: GACTGCCCCTCTTTGGTTCCATGGCTTCATCACCAG...TTTGCCCAGCTCCAGGCCTAAGGCTCTTCCTGGACATTCACGTGGACTCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | ATGACTGAAACTCTGTGGGGAAACTGTGAGGGTGAGCACACAGTGTGGCAGCCTGCTGAGCTGGGTGTCTaGGTCCTGTCTTTTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MTETLWGNCEGEHTVWQPAELGV*VLSFAS Trigger: GGAAGCAAAAGACAGGACCCAGACACCCAGCTCAGC...AGGCTGCCACACTGTGTGCTCACCCTCACAGTTTCCCCACAGAGTTTCAGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | CATGTGTGTGAGGAAGGCCTGACCAATGAGAGGCAGCCTGGGATGGAGAGTGGTTGGCATAGAAGGCTATaGGTTCATCAGGCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HVCEEGLTNERQPGMESGWHRRL*VHQAPG Trigger: ACCAGGAGCCTGATGAACCCATAGCCTTCTATGCCA...ACCACTCTCCATCCCAGGCTGCCTCTCATTGGTCAGGCCTTCCTCACACACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| 3UTR CAA 72 bp | GTTCTCACCAAAACATTTCTCAGACAACAGCAGCCATaGGATCGGGGCCCAGATGCGAAGGCTCAGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLTKTFLRQQQP*DRGPDAKAQSA Trigger: GGCACTCTGAGCCTTCGCATCTGGGCCCCGATCCAATGGCTGCTGTTGTCTGAGAAATGTTTTGGTGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCCTGAGGCAGTTGCTTCATGCCAAGCACTGGGCCAGTACTTTAGAGATCTTGCATGCTGGGCCTaGTCCCACAACTCAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPEAVASCQALGQYFRDLACWA*SHNSSS Trigger: AGAACTTGAGTTGTGGGAGCAGGCCCAGCATGCAAG...ATCTCTAAAGTACTGGCCCAGTGCTTGGCATGAAGCAACTGCCTCAGGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCAAAGGTTTTCGGCAGCGTGGAACACTCCATCTCGCTTCAGCCTGCTGGTCAGGTTCATTGGCTaGAAGGTGTTGAAGGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGQRFSAAWNTPSRFSLLVRFIG*KVLKVD Trigger: ATCAACCTTCAACACCTTCCAGCCAATGAACCTGAC...CAGCAGGCTGAAGCGAGATGGAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| 3UTR CAA 72 bp | AGGAGGCAGGATGGCTTCCCTAGTACATACAGTTCCTaGCCTTGGTTCCTGGTGACTTTCAGAAGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRQDGFPSTYSS*PWFLVTFRREQ Trigger: CTGCTCCCTTCTGAAAGTCACCAGGAACCAAGGCAAGGAACTGTATGTACTAGGGAAGCCATCCTGCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR GCA 90 bp | ATGACTGAAACTCTGTGGGGAAACTGTGAGGGTGAGCACACAGTGTGGCAGCCTTGTTCCTTCATAACTTaGATGCTGGGCCTGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MTETLWGNCEGEHTVWQPCSFIT*MLGLLP Trigger: TGGGAGCAGGCCCAGCATGCAAGTTATGAAGGAACA...AGGCTGCCACACTGTGTGCTCACCCTCACAGTTTCCCCACAGAGTTTCAGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| CDS-3UTR CCA 90 bp | AACATTTCTCAGACAACAGCAGCCATTGGATCGGGGCCCAGATGCGAAGGCTCACTGGGTCTGGATGCCTaGGATGTTTTCTCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NISQTTAAIGSGPRCEGSLGLDA*DVFSVC Trigger: ACACACAGAGAAAACATCCCAGGCATCCAGACCCAG...TGAGCCTTCGCATCTGGGCCCCGATCCAATGGCTGCTGTTGTCTGAGAAATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR CCA 90 bp | ACTCCTTTAATAGTAATACCACATTCAGACATGACTGAAACTCTGTGGGGAAACGAGGAAGCTGAGGCTTaGCGGGGATGGGCGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPLIVIPHSDMTETLWGNEEAEA*RGWAAW Trigger: CCAGGCCGCCCATCCCCGCCAAGCCTCAGCTTCCTC...GTTTCCCCACAGAGTTTCAGTCATGTCTGAATGTGGTATTACTATTAAAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
||
| 3UTR CAA 72 bp | GGCGGTCTTGTAGGGATTGCTGTGGGCAGGACTGACTaGGTAGCCTTTGGTGAGTTTGGAGAAATATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGLVGIAVGRTD*VAFGEFGEIWC Trigger: ACACCATATTTCTCCAAACTCACCAAAGGCTACCAAGTCAGTCCTGCCCACAGCAATCCCTACAAGACCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS-3UTR CCA 90 bp | GTCACCTGCTCCTTTCTGCTGAGCTTAGATCTGACCTTAATATCCTTCCAATGCTCTGGACCCATGCTCTaGTCTCAGCTTGCAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: VTCSFLLSLDLTLISFQCSGPML*SQLAMT Trigger: TGTCATTGCAAGCTGAGACCAGAGCATGGGTCCAGA...GCATTGGAAGGATATTAAGGTCAGATCTAAGCTCAGCAGAAAGGAGCAGGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS CCA 90 bp | CTGGGTCTGGATGCCTGGGATGTTTTCTCTGTGTGTCCTGAGGCCTaGGCCTGGCCCTGTTGGAGGAGCAGGCTGAGCTGGGTGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLDAWDVFSVCPEA*AWPCWRSRLSWVSG Trigger: CCCAGACACCCAGCTCAGCCTGCTCCTCCAACAGGGCCAGGCCCAGGCCTCAGGACACACAGAGAAAACATCCCAGGCATCCAGACCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
||
| CDS CCA 90 bp | GCCTTCTGTTGGGAGGCCCATACTTTCTCTGTGTGTCCTGAGGCCTaGGCCTGGCCCTGTTGGAGGAGCAGGCTGAGCTGGGTGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AFCWEAHTFSVCPEA*AWPCWRSRLSWVSG Trigger: CCCAGACACCCAGCTCAGCCTGCTCCTCCAACAGGGCCAGGCCCAGGCCTCAGGACACACAGAGAAAGTATGGGCCTCCCAACAGAAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107581.9 |
||
| CDS GCA 90 bp | AGGAGGAAGCTGAGGCTTGGCGGGGATGGGCGGCCTGGGTCTGGATaGCTGGGATGTCGCCTTCTGTTGGGAGGCCCATACTTTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRKLRLGGDGRPGSG*LGCRLLLGGPYFLC Trigger: ACAGAGAAAGTATGGGCCTCCCAACAGAAGGCGACATCCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTCAGCTTCCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107581.9 |
||
| CDS CCA 90 bp | TATAGACTTCAGGAGGAAGCTGAGGCTTGGCGGGGATGGGCGGCCTaGGTCTGGATGCCTGGGATGTCGCCTTCTGTTGGGAGGCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: YRLQEEAEAWRGWAA*VWMPGMSPSVGRPI Trigger: TATGGGCCTCCCAACAGAAGGCGACATCCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTCAGCTTCCTCCTGAAGTCTATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107581.9 |
||
| CDS CCA 90 bp | CAGGACTTGTATAGACTTCAGGAGGAAGCTGAGGCTTGGCGGGGATaGGCGGCCTGGGTCTGGATGCCTGGGATGTCGCCTTCTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QDLYRLQEEAEAWRG*AAWVWMPGMSPSVG Trigger: CCCAACAGAAGGCGACATCCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTCAGCTTCCTCCTGAAGTCTATACAAGTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107581.9 |
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| CDS CCA 90 bp | GTCGTGAAGCAGGACTTGTATAGACTTCAGGAGGAAGCTGAGGCTTaGCGGGGATGGGCGGCCTGGGTCTGGATGCCTGGGATGTCGCCT | + |
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Preference number: 5 (lower is better) Translates to: VVKQDLYRLQEEAEA*RGWAAWVWMPGMSP Trigger: AGGCGACATCCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTCAGCTTCCTCCTGAAGTCTATACAAGTCCTGCTTCACGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107581.9 |
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| CDS CCA 90 bp | TATAGACTTCAGGAGGAAGCTGAGGCTTGGCGGGGATGGGCGGCCTaGGTCTGGATGCCTGGGATGTTTTCTCTGTGTGTCCTGAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: YRLQEEAEAWRGWAA*VWMPGMFSLCVLRP Trigger: AGGCCTCAGGACACACAGAGAAAACATCCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTCAGCTTCCTCCTGAAGTCTATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| CDS-3UTR CAA 90 bp | GAATGTCCAGGAAGAGCCTTAGGCCTGGAGCTGGGCAAAGGTTTTCGGCAGCGTCCCTTGGGGGCATGGTaGGGCCAAGCAGAACTCCAT | + |
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Preference number: 5 (lower is better) Translates to: ECPGRALGLELGKGFRQRPLGAW*GQAELH Trigger: ATGGAGTTCTGCTTGGCCCAACCATGCCCCCAAGGG...ACGCTGCCGAAAACCTTTGCCCAGCTCCAGGCCTAAGGCTCTTCCTGGACATTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS-3UTR CAA 90 bp | GAAACTCTGTGGGGAAACTGTGAGGGTGAGCACACAGTGTGGCAGCCTCCTCCTCCCTTGGGGGCATGGTaGGGCCAAGCAGAACTCCAT | + |
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Preference number: 5 (lower is better) Translates to: ETLWGNCEGEHTVWQPPPPLGAW*GQAELH Trigger: ATGGAGTTCTGCTTGGCCCAACCATGCCCCCAAGGG...AGGAGGAGGCTGCCACACTGTGTGCTCACCCTCACAGTTTCCCCACAGAGTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS-3UTR CAA 90 bp | AGCTGGGCAAAGGTTTTCGGCAGCGTGGAACACTCCATCTCGCTTCAGCCTGCTCAAAGAGGGGCAGTCTaGAGCAAGAGCCAGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: SWAKVFGSVEHSISLQPAQRGAV*SKSQWA Trigger: GGCCCACTGGCTCTTGCTCAAGACTGCCCCTCTTTG...AGCAGGCTGAAGCGAGATGGAGTGTTCCACGCTGCCGAAAACCTTTGCCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS CCA 90 bp | CAGGACTTGTATAGACTTCAGGAGGAAGCTGAGGCTTGGCGGGGATaGGCGGCCTGGGTCTGGATGCCTGGGATGTTTTCTCTGTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: QDLYRLQEEAEAWRG*AAWVWMPGMFSLCV Trigger: GACACACAGAGAAAACATCCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTCAGCTTCCTCCTGAAGTCTATACAAGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| CDS CCA 90 bp | GTCGTGAAGCAGGACTTGTATAGACTTCAGGAGGAAGCTGAGGCTTaGCGGGGATGGGCGGCCTGGGTCTGGATGCCTGGGATGTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: VVKQDLYRLQEEAEA*RGWAAWVWMPGMFS Trigger: AGAAAACATCCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTCAGCTTCCTCCTGAAGTCTATACAAGTCCTGCTTCACGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| CDS-3UTR CAA 90 bp | GCAGCCTCCTCCTCTGAGCCCACTGGCAGTGACGCTCTCCAGGGAGCTGGGTCAATTGGCTGGAAGGTGTaGAAGGTTGATGAAGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: AASSSEPTGSDALQGAGSIGWKV*KVDEVA Trigger: AGCTACTTCATCAACCTTCAACACCTTCCAGCCAAT...TGACCCAGCTCCCTGGAGAGCGTCACTGCCAGTGGGCTCAGAGGAGGAGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS CCA 90 bp | TCTGCTCGACTCCTTGAGCTTATCTTTCCCTGTACCTCCCTTACCTaGCCTCTTGAGATAGGCCTGGACCAGCACTTTCGGAGGATGGGG | + |
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Preference number: 5 (lower is better) Translates to: SARLLELIFPCTSLT*PLEIGLDQHFRRMG Trigger: CCCCATCCTCCGAAAGTGCTGGTCCAGGCCTATCTCAAGAGGCCAGGTAAGGGAGGTACAGGGAAAGATAAGCTCAAGGAGTCGAGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS-3UTR CAA 90 bp | AGTGACGCTCTCCAGGGAGCTGGGTCAGTGTCACATGTGTGTGAGGAAGGCCTGATTGGCTGGAAGGTGTaGAAGGTTGATGAAGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: SDALQGAGSVSHVCEEGLIGWKV*KVDEVA Trigger: AGCTACTTCATCAACCTTCAACACCTTCCAGCCAAT...CAGGCCTTCCTCACACACATGTGACACTGACCCAGCTCCCTGGAGAGCGTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS CCA 72 bp | GAAGCTGAGGCTTGGCGGGGATGGGCGGCCTGGGTCTaGATGCCTGGGATGTCGCCTTCTGTTGGGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: EAEAWRGWAAWV*MPGMSPSVGRP Trigger: GGGCCTCCCAACAGAAGGCGACATCCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTCAGCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107581.9 |
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| CDS GCA 72 bp | CTGAGGCTTGGCGGGGATGGGCGGCCTGGGTCTGGATaGCTGGGATGTCGCCTTCTGTTGGGAGGCCCATAC | + |
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Preference number: 6 (lower is better) Translates to: LRLGGDGRPGSG*LGCRLLLGGPY Trigger: GTATGGGCCTCCCAACAGAAGGCGACATCCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107581.9 |
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| CDS CCA 72 bp | GGCTTGGCGGGGATGGGCGGCCTGGGTCTGGATGCCTaGGATGTTTTCTCTGTGTGTCCTGAGGCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GLAGMGGLGLDA*DVFSVCPEAWA Trigger: GGCCCAGGCCTCAGGACACACAGAGAAAACATCCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| CDS CCA 72 bp | GGCTTGGCGGGGATGGGCGGCCTGGGTCTGGATGCCTaGGATGTCGCCTTCTGTTGGGAGGCCCATACTTTC | + |
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Preference number: 6 (lower is better) Translates to: GLAGMGGLGLDA*DVAFCWEAHTF Trigger: GAAAGTATGGGCCTCCCAACAGAAGGCGACATCCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107581.9 |
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| CDS CCA 72 bp | GCCTGGACCAGCACTTTCGGAGGATGGGGTGTCCAATaGGCGCCGTTCCCGATGGCCCTTCCACCTCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: AWTSTFGGWGVQ*APFPMALPPQH Trigger: ATGCTGAGGTGGAAGGGCCATCGGGAACGGCGCCCATTGGACACCCCATCCTCCGAAAGTGCTGGTCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS CCA 72 bp | GAAGCTGAGGCTTGGCGGGGATGGGCGGCCTGGGTCTaGATGCCTGGGATGTTTTCTCTGTGTGTCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: EAEAWRGWAAWV*MPGMFSLCVLR Trigger: CCTCAGGACACACAGAGAAAACATCCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTCAGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| CDS CCA 72 bp | CAGGACTTGTATAGACTTCAGGAGGAAGCTGAGGCTTaGCGGGGATGGGCGGCCTGGGTCTGGATGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: QDLYRLQEEAEA*RGWAAWVWMPG Trigger: CCCAGGCATCCAGACCCAGGCCGCCCATCCCCGCCAAGCCTCAGCTTCCTCCTGAAGTCTATACAAGTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS CCA 72 bp | TGGGATGTTTTCTCTGTGTGTCCTGAGGCCTGGGCCTaGCCCTGTTGGAGGAGCAGGCTGAGCTGGGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: WDVFSVCPEAWA*PCWRSRLSWVS Trigger: AGACACCCAGCTCAGCCTGCTCCTCCAACAGGGCCAGGCCCAGGCCTCAGGACACACAGAGAAAACATCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029709.7 |
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| CDS CCA 72 bp | GGCCTGGGTCTGGATGCCTGGGATGTCGCCTTCTGTTaGGAGGCCCATACTTTCTCTGTGTGTCCTGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GLGLDAWDVAFC*EAHTFSVCPEA Trigger: GGCCTCAGGACACACAGAGAAAGTATGGGCCTCCCAACAGAAGGCGACATCCCAGGCATCCAGACCCAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107581.9 |
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| CDS CAA 90 bp | GCTTCCCTTCTGGTGATGAAGCCATGGAACCAAAGAGGGGCAGTCTaGAGCAAGAGCCAGTGGGCCTGGGTCTTCTGGACCCATGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ASLLVMKPWNQRGAV*SKSQWAWVFWTHAL Trigger: CAGAGCATGGGTCCAGAAGACCCAGGCCCACTGGCTCTTGCTCAAGACTGCCCCTCTTTGGTTCCATGGCTTCATCACCAGAAGGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS CAA 90 bp | CCCTGTTGGAGGAGCAGGCTGAGCTGGGTGTCTGGGTCCTGTCTTTaGCTTCCAGAGTCTGAATCAGCCCTTAGGGAAAGTCCAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PCWRSRLSWVSGSCL*LPESESALRESPAG Trigger: GCCTGCTGGACTTTCCCTAAGGGCTGATTCAGACTCTGGAAGCAAAAGACAGGACCCAGACACCCAGCTCAGCCTGCTCCTCCAACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS CCA 72 bp | TCGGAGGATGGGGTGTCCAATGGGCGCCGTTCCCGATaGCCCTTCCACCTCAGCATAGATATTACTAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SEDGVSNGRRSR*PFHLSIDITRS Trigger: GCTCCTAGTAATATCTATGCTGAGGTGGAAGGGCCATCGGGAACGGCGCCCATTGGACACCCCATCCTCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS TCA 72 bp | GCAGAGACCACCGTGTGGTTAGTTCTGGGGCTGAGCTaGACCCCCTGTTCCTTCATAACTTGCATGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: AETTVWLVLGLS*TPCSFITCMLG Trigger: GCCCAGCATGCAAGTTATGAAGGAACAGGGGGTTCAGCTCAGCCCCAGAACTAACCACACGGTGGTCTCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS CCA 72 bp | ACTTGCATGCTGGGCCTGCTCCCACAACTCAAGTTCTaGCATCTCCCCTGGGTCAGGTTCATTGGCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: TCMLGLLPQLKF*HLPWVRFIGWK Trigger: CTTCCAGCCAATGAACCTGACCCAGGGGAGATGCCAGAACTTGAGTTGTGGGAGCAGGCCCAGCATGCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS CAA 90 bp | GTGGTTAGTTCTGGGGCTGAGCTGAACCCCCTGTTCCTTCATAACTaGCATGCTGGGCCTGCTCCCACAACTCAAGTTCTGGCATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VVSSGAELNPLFLHN*HAGPAPTTQVLASP Trigger: GGGAGATGCCAGAACTTGAGTTGTGGGAGCAGGCCCAGCATGCAAGTTATGAAGGAACAGGGGGTTCAGCTCAGCCCCAGAACTAACCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS CCA 72 bp | GGCCTGCTCCCACAACTCAAGTTCTGGCATCTCCCCTaGGTCAGGTTCATTGGCTGGAAGGTGTTGAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GLLPQLKFWHLP*VRFIGWKVLKV Trigger: AACCTTCAACACCTTCCAGCCAATGAACCTGACCCAGGGGAGATGCCAGAACTTGAGTTGTGGGAGCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS CCA 72 bp | CTCCTTGAGCTTATCTTTCCCTGTACCTCCCTTACCTaGCCTCTTGAGATAGGCCTGGACCAGCACTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: LLELIFPCTSLT*PLEIGLDQHFR Trigger: CCGAAAGTGCTGGTCCAGGCCTATCTCAAGAGGCCAGGTAAGGGAGGTACAGGGAAAGATAAGCTCAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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| CDS CAA 72 bp | AGGAGCAGGCTGAGCTGGGTGTCTGGGTCCTGTCTTTaGCTTCCAGAGTCTGAATCAGCCCTTAGGGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: RSRLSWVSGSCL*LPESESALRES Trigger: ACTTTCCCTAAGGGCTGATTCAGACTCTGGAAGCAAAAGACAGGACCCAGACACCCAGCTCAGCCTGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029709.7 ENSMUST00000107581.9 |
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