Pregenerated sensors for SGTB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042743Ensembl transcript IDs: ENSMUST00000044385.14, ENSMUST00000159574.2, ENSMUST00000160322.8
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGCTGGGCAAGCACTATGCACTGATCTGTGTTCCCAGGCGCTCTaGTTGTCCTTTAACAGCTCCAGGATCTGTTCCATGGGGCATCTA | + |
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Preference number: 1 (lower is better) Translates to: HAGQALCTDLCSQAL*LSFNSSRICSMGHL Trigger: TAGATGCCCCATGGAACAGATCCTGGAGCTGTTAAAGGACAACCAGAGCGCCTGGGAACACAGATCAGTGCATAGTGCTTGCCCAGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR CCA 90 bp | CCCAGGCGCTCTGGTTGTCCTTTAACAGCTCCAGGATCTGTTCCATaGGGCATCTACTCTCTGTTCCTACTTATTTCCTCTCTAATGCAG | + |
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Preference number: 1 (lower is better) Translates to: PRRSGCPLTAPGSVP*GIYSLFLLISSLMQ Trigger: CTGCATTAGAGAGGAAATAAGTAGGAACAGAGAGTAGATGCCCCATGGAACAGATCCTGGAGCTGTTAAAGGACAACCAGAGCGCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR GCA 90 bp | ATGAAGATAGAGTTCCCAAGCTGGGAATTCTTATCCGAGTCCTACTaGTCACATGAGTTGGGGGCTGTTTCTTCCTTGTCTGCTTCCCGA | + |
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Preference number: 1 (lower is better) Translates to: MKIEFPSWEFLSESY*SHELGAVSSLSASR Trigger: TCGGGAAGCAGACAAGGAAGAAACAGCCCCCAACTCATGTGAGCAGTAGGACTCGGATAAGAATTCCCAGCTTGGGAACTCTATCTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR GCA 90 bp | TCCTTCCTTCCCAAAGAAACAAAACTAGAAACGTGCAGTGAAAGATaGACTGGTTCCTGTGTCCCACCTAAGAAGAGCTGCCTTCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: SFLPKETKLETCSER*TGSCVPPKKSCLQQ Trigger: TTGCTGAAGGCAGCTCTTCTTAGGTGGGACACAGGAACCAGTGCATCTTTCACTGCACGTTTCTAGTTTTGTTTCTTTGGGAAGGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR CCA 90 bp | ACCCTTAACAAGGCTACTGATCACTGCTTTCCAAAGGAGTCTGTCTaGATTACGTTCAAGTCTGCTTGTGGTAAACTATTATCTAAACAG | + |
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Preference number: 1 (lower is better) Translates to: TLNKATDHCFPKESV*ITFKSACGKLLSKQ Trigger: CTGTTTAGATAATAGTTTACCACAAGCAGACTTGAACGTAATCCAGACAGACTCCTTTGGAAAGCAGTGATCAGTAGCCTTGTTAAGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR-3UTR GCA 90 bp | TGTTCCCAGGCGCTCTGGTTGTCCTTTAACAGCTCCAGGATCTGTTCCATGGGGCATGCCAAGCCAAACTaGACCAAAGGATTACACAAG | + |
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Preference number: 2 (lower is better) Translates to: CSQALWLSFNSSRICSMGHAKPN*TKGLHK Trigger: CTTGTGTAATCCTTTGGTGCAGTTTGGCTTGGCATG...CCCCATGGAACAGATCCTGGAGCTGTTAAAGGACAACCAGAGCGCCTGGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR-3UTR GCA 90 bp | ACTCACTGTGTAGCCAAGAGTGATGCTGAATTCCTGGTCCTGACCCTTACCTCCGCCATTCCCTTTGCATaGAGTACTAGGGAAGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: THCVAKSDAEFLVLTLTSAIPFA*STREGV Trigger: TACCCCTTCCCTAGTACTGCATGCAAAGGGAATGGC...GGAGGTAAGGGTCAGGACCAGGAATTCAGCATCACTCTTGGCTACACAGTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR-3UTR GCA 90 bp | AGCACACTGCCTTCGCTTTCTGGGCATTCACAGTATCTTCCAAGTGCCACTCTCAAGGCTACTGATCACTaGTTTCCAAAGGAGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: STLPSLSGHSQYLPSATLKATDH*FPKESV Trigger: GACAGACTCCTTTGGAAAGCAGTGATCAGTAGCCTT...GAGAGTGGCACTTGGAAGATACTGTGAATGCCCAGAAAGCGAAGGCAGTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR-3UTR TCA 90 bp | CACATAATTAAATCCCACTTAGGAAACCCGGAATCTGGGGACACGTCAGTGGCTTCTATGCAGAAAACCTaGGCACACTGCCTTCGCTTT | + |
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Preference number: 2 (lower is better) Translates to: HIIKSHLGNPESGDTSVASMQKT*AHCLRF Trigger: AAAGCGAAGGCAGTGTGCTCAGGTTTTCTGCATAGA...AGCCACTGACGTGTCCCCAGATTCCGGGTTTCCTAAGTGGGATTTAATTATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR-3UTR TCA 90 bp | GCTGCCTTCAGCAAGGGGCATCAGCACATGAAGATAGAGTTCCCAAGCTGGGAACAGTTCCATTTGAAATaGGCCTTCTTATCCATCAGT | + |
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Preference number: 2 (lower is better) Translates to: AAFSKGHQHMKIEFPSWEQFHLK*AFLSIS Trigger: ACTGATGGATAAGAAGGCTCATTTCAAATGGAACTG...TTCCCAGCTTGGGAACTCTATCTTCATGTGCTGATGCCCCTTGCTGAAGGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR-3UTR GCA 90 bp | GCTGCCTTCAGCAAGGGGCATCAGCACATGAAGATAGAGTTCCCAAGCTGGGAATGTTTCTTCCTTGTCTaGTTCCCGAAAGAGTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: AAFSKGHQHMKIEFPSWECFFLV*FPKELK Trigger: CTTTAACTCTTTCGGGAAGCAGACAAGGAAGAAACA...TTCCCAGCTTGGGAACTCTATCTTCATGTGCTGATGCCCCTTGCTGAAGGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR-3UTR GCA 90 bp | AATAAATTAAAGTTAAGCATAAGAACCGACATGCCAAGCCAAACTGCACCAAAGACTGATGGTAGCGCGTaGCAGCGCTTCTCTCTGACG | + |
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Preference number: 2 (lower is better) Translates to: NKLKLSIRTDMPSQTAPKTDGSA*QRFSLT Trigger: CGTCAGAGAGAAGCGCTGGCACGCGCTACCATCAGT...CTTTGGTGCAGTTTGGCTTGGCATGTCGGTTCTTATGCTTAACTTTAATTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR-3UTR GCA 90 bp | CACATAATTAAATCCCACTTAGGAAACCCGGAATCTGGGGACACGTCAGTGGCTAACTGGCCATGCGAATaGTATAAACACGAAGCTACA | + |
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Preference number: 2 (lower is better) Translates to: HIIKSHLGNPESGDTSVANWPCE*YKHEAT Trigger: TGTAGCTTCGTGTTTATAGCATTCGCATGGCCAGTT...AGCCACTGACGTGTCCCCAGATTCCGGGTTTCCTAAGTGGGATTTAATTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR-3UTR CCA 90 bp | GCTGCCTTCAGCAAGGGGCATCAGCACATGAAGATAGAGTTCCCAAGCTGGGAACATTATGTACTTAACTaGCCATGCGAATGCTATAAA | + |
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Preference number: 2 (lower is better) Translates to: AAFSKGHQHMKIEFPSWEHYVLN*PCECYK Trigger: TTTATAGCATTCGCATGGCCAGTTAAGTACATAATG...TTCCCAGCTTGGGAACTCTATCTTCATGTGCTGATGCCCCTTGCTGAAGGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR-3UTR CCA 90 bp | CATCTACTCTCTGTTCCTACTTATTTCCTCTCTAATGCAGTGATGGGATACGAACCAAAGGAGTCTGTCTaGATTACGTTCAAGTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: HLLSVPTYFLSNAVMGYEPKESV*ITFKSA Trigger: AGCAGACTTGAACGTAATCCAGACAGACTCCTTTGG...TTCGTATCCCATCACTGCATTAGAGAGGAAATAAGTAGGAACAGAGAGTAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR CAA 90 bp | TTCCTCCGTTATGTTCAGACTCTGTATAGGGTGGGTTTTGTTACTTaGTTTTTGGCTATTATCTACAAGTGTACACGTCAGAATGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: FLRYVQTLYRVGFVT*FLAIIYKCTRQNVC Trigger: ACAAACATTCTGACGTGTACACTTGTAGATAATAGCCAAAAACAAAGTAACAAAACCCACCCTATACAGAGTCTGAACATAACGGAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR TCA 72 bp | AAGCTGGGAATTCTTATCCGAGTCCTACTGCTCACATaGGTTGGGGGCTGTTTCTTCCTTGTCTGCTTCCCG | + |
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Preference number: 3 (lower is better) Translates to: KLGILIRVLLLT*VGGCFFLVCFP Trigger: CGGGAAGCAGACAAGGAAGAAACAGCCCCCAACTCATGTGAGCAGTAGGACTCGGATAAGAATTCCCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR GCA 72 bp | AGATGCACTGGTTCCTGTGTCCCACCTAAGAAGAGCTaGCTTCAGCAAGGGGCATCAGCACATGAAGATAGA | + |
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Preference number: 3 (lower is better) Translates to: RCTGSCVPPKKS*LQQGASAHEDR Trigger: TCTATCTTCATGTGCTGATGCCCCTTGCTGAAGGCAGCTCTTCTTAGGTGGGACACAGGAACCAGTGCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR CCA 72 bp | CAAGCACTATGCACTGATCTGTGTTCCCAGGCGCTCTaGTTGTCCTTTAACAGCTCCAGGATCTGTTCCATG | + |
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Preference number: 3 (lower is better) Translates to: QALCTDLCSQAL*LSFNSSRICSM Trigger: CATGGAACAGATCCTGGAGCTGTTAAAGGACAACCAGAGCGCCTGGGAACACAGATCAGTGCATAGTGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR GCA 72 bp | GAGTTCCCAAGCTGGGAATTCTTATCCGAGTCCTACTaGTCACATGAGTTGGGGGCTGTTTCTTCCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: EFPSWEFLSESY*SHELGAVSSLS Trigger: AGACAAGGAAGAAACAGCCCCCAACTCATGTGAGCAGTAGGACTCGGATAAGAATTCCCAGCTTGGGAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR CCA 72 bp | CTATGCAGAAAACCTGAGCACACTGCCTTCGCTTTCTaGGCATTCACAGTATCTTCCAAGTGCCACTCTCGA | + |
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Preference number: 3 (lower is better) Translates to: LCRKPEHTAFAF*AFTVSSKCHSR Trigger: TCGAGAGTGGCACTTGGAAGATACTGTGAATGCCCAGAAAGCGAAGGCAGTGTGCTCAGGTTTTCTGCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR CCA 72 bp | GGGAATTCTTATCCGAGTCCTACTGCTCACATGAGTTaGGGGCTGTTTCTTCCTTGTCTGCTTCCCGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: GNSYPSPTAHMS*GLFLPCLLPER Trigger: TCTTTCGGGAAGCAGACAAGGAAGAAACAGCCCCCAACTCATGTGAGCAGTAGGACTCGGATAAGAATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR GCA 72 bp | CAGGCTGTATTCACCCTTAACAAGGCTACTGATCACTaGTTTCCAAAGGAGTCTGTCTGGATTACGTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: QAVFTLNKATDH*FPKESVWITFK Trigger: CTTGAACGTAATCCAGACAGACTCCTTTGGAAAGCAGTGATCAGTAGCCTTGTTAAGGGTGAATACAGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR GCA 72 bp | CCAGTTCCATTTGAAATGAGCCTTCTTATCCATCAGTaGACTAAGAGTCCTCCCATCGATAGCTCGTGTCAT | + |
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Preference number: 3 (lower is better) Translates to: PVPFEMSLLIHQ*TKSPPIDSSCH Trigger: ATGACACGAGCTATCGATGGGAGGACTCTTAGTGCACTGATGGATAAGAAGGCTCATTTCAAATGGAACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR CCA 72 bp | TCTGGTTGTCCTTTAACAGCTCCAGGATCTGTTCCATaGGGCATCTACTCTCTGTTCCTACTTATTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: SGCPLTAPGSVP*GIYSLFLLISS Trigger: AGAGGAAATAAGTAGGAACAGAGAGTAGATGCCCCATGGAACAGATCCTGGAGCTGTTAAAGGACAACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR-3UTR CAA 90 bp | AATAAATTAAAGTTAAGCATAAGAACCGACATGCCAAGCCAAACTGCACCAAAGTACACGTCAGAATGTTaGTACTGGGGCGAGGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: NKLKLSIRTDMPSQTAPKYTSEC*YWGEGP Trigger: AGGACCCTCGCCCCAGTACAAACATTCTGACGTGTA...CTTTGGTGCAGTTTGGCTTGGCATGTCGGTTCTTATGCTTAACTTTAATTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR CCA 72 bp | AAGGCTACTGATCACTGCTTTCCAAAGGAGTCTGTCTaGATTACGTTCAAGTCTGCTTGTGGTAAACTATTA | + |
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Preference number: 3 (lower is better) Translates to: KATDHCFPKESV*ITFKSACGKLL Trigger: TAATAGTTTACCACAAGCAGACTTGAACGTAATCCAGACAGACTCCTTTGGAAAGCAGTGATCAGTAGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR-3UTR CAA 90 bp | CATCTACTCTCTGTTCCTACTTATTTCCTCTCTAATGCAGTGATGGGATACGAATGTATAGGGTGGGTTTaGTTACTTTGTTTTTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: HLLSVPTYFLSNAVMGYECIGWV*LLCFWL Trigger: TAGCCAAAAACAAAGTAACAAAACCCACCCTATACA...TTCGTATCCCATCACTGCATTAGAGAGGAAATAAGTAGGAACAGAGAGTAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR GCA 72 bp | AGTATGTTTCATTATGTACTTAACTGGCCATGCGAATaGTATAAACACGAAGCTACAGACAAGCTTAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: SMFHYVLNWPCE*YKHEATDKLSL Trigger: TAAACTAAGCTTGTCTGTAGCTTCGTGTTTATAGCATTCGCATGGCCAGTTAAGTACATAATGAAACATACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| 3UTR CAA 72 bp | GCACTATGCACTGATCTGTGTTCCCAGGCGCTCTGGTaGTCCTTTAACAGCTCCAGGATCTGTTCCATGGGG | + |
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Preference number: 4 (lower is better) Translates to: ALCTDLCSQALW*SFNSSRICSMG Trigger: CCCCATGGAACAGATCCTGGAGCTGTTAAAGGACAACCAGAGCGCCTGGGAACACAGATCAGTGCATAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR TCA 90 bp | GGGGGCTGTTTCTTCCTTGTCTGCTTCCCGAAAGAGTTAAAGAGAAGGGATATCCGTCTGCACTGCTGCTaGACGATCTGCTCCGGATGT | + |
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Preference number: 4 (lower is better) Translates to: GGCFFLVCFPKELKRRDIRLHCC*TICSGC Trigger: ACATCCGGAGCAGATCGTTCAGCAGCAGTGCAGACG...GATATCCCTTCTCTTTAACTCTTTCGGGAAGCAGACAAGGAAGAAACAGCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR GCA 90 bp | TGTTCCCAGGCGCTCTGGTTGTCCTTTAACAGCTCCAGGATCTGTTCCATGGGGAGGATCGAGATCCAGTaGCTTCTGGTAGCTTGTAAC | + |
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Preference number: 4 (lower is better) Translates to: CSQALWLSFNSSRICSMGRIEIQ*LLVACN Trigger: GTTACAAGCTACCAGAAGGCACTGGATCTCGATCCT...CCCCATGGAACAGATCCTGGAGCTGTTAAAGGACAACCAGAGCGCCTGGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR GCA 90 bp | ACTCACTGTGTAGCCAAGAGTGATGCTGAATTCCTGGTCCTGACCCTTACCTCCCGTGTAGCAGTCCACTaGCGCAGCGTAATTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: THCVAKSDAEFLVLTLTSRVAVH*RSVIFF Trigger: GAAGAAAATTACGCTGCGGCAGTGGACTGCTACACG...GGAGGTAAGGGTCAGGACCAGGAATTCAGCATCACTCTTGGCTACACAGTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR TCA 90 bp | TGTTCCCAGGCGCTCTGGTTGTCCTTTAACAGCTCCAGGATCTGTTCCATGGGGGTATATGCATCCATCTaGCTTTGTTCCCGCAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: CSQALWLSFNSSRICSMGVYASI*LCSRKK Trigger: TTTCTTGCGGGAACAAAGTCAGATGGATGCATATAC...CCCCATGGAACAGATCCTGGAGCTGTTAAAGGACAACCAGAGCGCCTGGGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR TCA 90 bp | AGCACACTGCCTTCGCTTTCTGGGCATTCACAGTATCTTCCAAGTGCCACTCTCTTCTGTCAAAGGCTGTaGAACTGCCAGATGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: STLPSLSGHSQYLPSATLFCQRL*NCQMCV Trigger: GACACACATCTGGCAGTTTCACAGCCTTTGACAGAA...GAGAGTGGCACTTGGAAGATACTGTGAATGCCCAGAAAGCGAAGGCAGTGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR TCA 90 bp | TGTTCCCAGGCGCTCTGGTTGTCCTTTAACAGCTCCAGGATCTGTTCCATGGGGTACAGACGGAGTTTGTaGACATTTCTGTCAAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: CSQALWLSFNSSRICSMGYRRSL*TFLSKA Trigger: AGCCTTTGACAGAAATGTTCACAAACTCCGTCTGTA...CCCCATGGAACAGATCCTGGAGCTGTTAAAGGACAACCAGAGCGCCTGGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR GCA 90 bp | GCTGTATTCACCCTTAACAAGGCTACTGATCACTGCTTTCCAAAGGAGTCTGTCTTCTGCTGTTGTATCTaGTGCGCAAACTGCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: AVFTLNKATDHCFPKESVFCCCI*CANCCP Trigger: GGGGCAGCAGTTTGCGCAGCAGATACAACAGCAGAA...GACAGACTCCTTTGGAAAGCAGTGATCAGTAGCCTTGTTAAGGGTGAATACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR CCA 90 bp | GGGGGCTGTTTCTTCCTTGTCTGCTTCCCGAAAGAGTTAAAGAGAAGGGATATCGATCTGCTCCGGATGTaGTTTCTCAGCTGCTCTATG | + |
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Preference number: 4 (lower is better) Translates to: GGCFFLVCFPKELKRRDIDLLRM*FLSCSM Trigger: CATAGAGCAGCTGAGAAACCACATCCGGAGCAGATC...GATATCCCTTCTCTTTAACTCTTTCGGGAAGCAGACAAGGAAGAAACAGCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR GCA 90 bp | CACATAATTAAATCCCACTTAGGAAACCCGGAATCTGGGGACACGTCAGTGGCTATGTGGTTTCTCAGCTaGTCTATGAGTTCCGGATTC | + |
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Preference number: 4 (lower is better) Translates to: HIIKSHLGNPESGDTSVAMWFLS*SMSSGF Trigger: GAATCCGGAACTCATAGAGCAGCTGAGAAACCACAT...AGCCACTGACGTGTCCCCAGATTCCGGGTTTCCTAAGTGGGATTTAATTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR GCA 90 bp | GGGGGCTGTTTCTTCCTTGTCTGCTTCCCGAAAGAGTTAAAGAGAAGGGATATCCTTTCATGTGGTTATTaGCTTCATCCTTCAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GGCFFLVCFPKELKRRDILSCGY*LHPSAG Trigger: ACCAGCTGAAGGATGAAGGCAATAACCACATGAAAG...GATATCCCTTCTCTTTAACTCTTTCGGGAAGCAGACAAGGAAGAAACAGCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR CCA 90 bp | CATCTACTCTCTGTTCCTACTTATTTCCTCTCTAATGCAGTGATGGGATACGAATCCAACTCCGGCAGCTaGTCCTCCAATGGCATTTGT | + |
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Preference number: 4 (lower is better) Translates to: HLLSVPTYFLSNAVMGYESNSGS*SSNGIC Trigger: ACAAATGCCATTGGAGGACCAGCTGCCGGAGTTGGA...TTCGTATCCCATCACTGCATTAGAGAGGAAATAAGTAGGAACAGAGAGTAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR CCA 90 bp | TATTCTCTCAGGTTTACACAGGAGACTTTCCTCCGTTATGTTCAGACTCTGTATCAGCTGGTCCTCCAATaGCATTTGTCATCATCCCTG | + |
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Preference number: 4 (lower is better) Translates to: YSLRFTQETFLRYVQTLYQLVLQ*HLSSSL Trigger: CAGGGATGATGACAAATGCCATTGGAGGACCAGCTG...ATACAGAGTCTGAACATAACGGAGGAAAGTCTCCTGTGTAAACCTGAGAGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR CCA 90 bp | GCTGTATTCACCCTTAACAAGGCTACTGATCACTGCTTTCCAAAGGAGTCTGTCAATAAACGGCATTGTTaGGATCCAGTTCTATTGCCT | + |
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Preference number: 4 (lower is better) Translates to: AVFTLNKATDHCFPKESVNKRHC*DPVLLP Trigger: AGGCAATAGAACTGGATCCCAACAATGCCGTTTATT...GACAGACTCCTTTGGAAAGCAGTGATCAGTAGCCTTGTTAAGGGTGAATACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR CCA 90 bp | GATGTATTCTCTCAGGTTTACACAGGAGACTTTCCTCCGTTATGTTCAGACTCTCAGATGTGTGTCTTCTaGACTGATCTTAAAAACGGT | + |
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Preference number: 4 (lower is better) Translates to: DVFSQVYTGDFPPLCSDSQMCVF*TDLKNG Trigger: ACCGTTTTTAAGATCAGTCCAGAAGACACACATCTG...AGAGTCTGAACATAACGGAGGAAAGTCTCCTGTGTAAACCTGAGAGAATACATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR GCA 90 bp | TATTCTCTCAGGTTTACACAGGAGACTTTCCTCCGTTATGTTCAGACTCTGTATTTCATCAGAAGTATATaGATCCATCTGACTTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: YSLRFTQETFLRYVQTLYFIRSI*IHLTLF Trigger: GAACAAAGTCAGATGGATGCATATACTTCTGATGAA...ATACAGAGTCTGAACATAACGGAGGAAAGTCTCCTGTGTAAACCTGAGAGAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR CAA 90 bp | GCTGCCTTCAGCAAGGGGCATCAGCACATGAAGATAGAGTTCCCAAGCTGGGAACCTCGGGCACTGAGTTaGAAAGCGGCCGTATGTCAT | + |
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Preference number: 5 (lower is better) Translates to: AAFSKGHQHMKIEFPSWEPRALS*KAAVCH Trigger: ATGACATACGGCCGCTTTCAAACTCAGTGCCCGAGG...TTCCCAGCTTGGGAACTCTATCTTCATGTGCTGATGCCCCTTGCTGAAGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS GCA 90 bp | TGCTCTATGAGTTCCGGATTCTGCTGTTGTATCTGCTGCGCAAACTaGTGCCCCGCTTGGATTAGGCTAGACAGGTCTGTTAGGCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: CSMSSGFCCCICCAN*CPAWIRLDRSVRPP Trigger: TGGAGGCCTAACAGACCTGTCTAGCCTAATCCAAGCGGGGCAGCAGTTTGCGCAGCAGATACAACAGCAGAATCCGGAACTCATAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 |
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| CDS-3UTR CAA 90 bp | TGTTCCCAGGCGCTCTGGTTGTCCTTTAACAGCTCCAGGATCTGTTCCATGGGGTTCCGGATTCTGCTGTaGTATCTGCTGCGCAAACTG | + |
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Preference number: 5 (lower is better) Translates to: CSQALWLSFNSSRICSMGFRILL*YLLRKL Trigger: CAGTTTGCGCAGCAGATACAACAGCAGAATCCGGAA...CCCCATGGAACAGATCCTGGAGCTGTTAAAGGACAACCAGAGCGCCTGGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS GCA 90 bp | TCTATGAGTTCCGGATTCTGCTGTTGTATCTGCTGCGCAAACTGCTaGCCCGCTTGGATTAGGCTAGACAGGTCTGTTAGGCCTCCAACT | + |
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Preference number: 5 (lower is better) Translates to: SMSSGFCCCICCANC*PAWIRLDRSVRPPT Trigger: AGTTGGAGGCCTAACAGACCTGTCTAGCCTAATCCAAGCGGGGCAGCAGTTTGCGCAGCAGATACAACAGCAGAATCCGGAACTCATAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 |
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| CDS GCA 90 bp | TCTGCACTGCTGCTGAACGATCTGCTCCGGATGTGGTTTCTCAGCTaGTCTATGAGTTCCGGATTCTGCTGTTGTATCTGCTGCGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: SALLLNDLLRMWFLS*SMSSGFCCCICCAN Trigger: GTTTGCGCAGCAGATACAACAGCAGAATCCGGAACTCATAGAGCAGCTGAGAAACCACATCCGGAGCAGATCGTTCAGCAGCAGTGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS CCA 90 bp | ATTTGCTTTGAGCAGCAGCCCTGTTGCAATAATAAACGGCATTGTTaGGATCCAGTTCTATTGCCTGCGTGTAGCAGTCCACTGCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: ICFEQQPCCNNKRHC*DPVLLPACSSPLPQ Trigger: CTGCGGCAGTGGACTGCTACACGCAGGCAATAGAACTGGATCCCAACAATGCCGTTTATTATTGCAACAGGGCTGCTGCTCAAAGCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 ENSMUST00000160322.8 |
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| CDS-3UTR CAA 90 bp | AGCACACTGCCTTCGCTTTCTGGGCATTCACAGTATCTTCCAAGTGCCACTCTCTCTTTCATGTGGTTATaGCCTTCATCCTTCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: STLPSLSGHSQYLPSATLSFMWL*PSSFSW Trigger: CCAGCTGAAGGATGAAGGCAATAACCACATGAAAGA...GAGAGTGGCACTTGGAAGATACTGTGAATGCCCAGAAAGCGAAGGCAGTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS-3UTR CAA 90 bp | ACTCACTGTGTAGCCAAGAGTGATGCTGAATTCCTGGTCCTGACCCTTACCTCCGTCCTCCAATGGCATTaGTCATCATCCCTGACATTA | + |
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Preference number: 5 (lower is better) Translates to: THCVAKSDAEFLVLTLTSVLQWH*SSSLTL Trigger: TAATGTCAGGGATGATGACAAATGCCATTGGAGGAC...GGAGGTAAGGGTCAGGACCAGGAATTCAGCATCACTCTTGGCTACACAGTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS GCA 90 bp | GGCATTGTTGGGATCCAGTTCTATTGCCTGCGTGTAGCAGTCCACTaGCGCAGCGTAATTTTCTTCTTTCATGTGGTTATTGCCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: GIVGIQFYCLRVAVH*RSVIFFFHVVIAFI Trigger: GATGAAGGCAATAACCACATGAAAGAAGAAAATTACGCTGCGGCAGTGGACTGCTACACGCAGGCAATAGAACTGGATCCCAACAATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 ENSMUST00000160322.8 |
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| CDS TCA 90 bp | CCTTGCTGTATTTCGAGTCAATTGCAATGGCTTTCTCGCAGTCCTTaGTTGCGTCTGTGTAGTGACTTAATTTGCTTTGAGCAGCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: PCCISSQLQWLSRSP*LRLCSDLICFEQQP Trigger: GGGCTGCTGCTCAAAGCAAATTAAGTCACTACACAGACGCAATCAAGGACTGCGAGAAAGCCATTGCAATTGACTCGAAATACAGCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 ENSMUST00000160322.8 |
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| CDS GCA 90 bp | AGCCCTGTTGCAATAATAAACGGCATTGTTGGGATCCAGTTCTATTaGCTGCGTGTAGCAGTCCACTGCCGCAGCGTAATTTTCTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: SPVAIINGIVGIQFY*LRVAVHCRSVIFFF Trigger: AAAGAAGAAAATTACGCTGCGGCAGTGGACTGCTACACGCAGGCAATAGAACTGGATCCCAACAATGCCGTTTATTATTGCAACAGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 ENSMUST00000160322.8 |
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| CDS-3UTR CAA 90 bp | GATGTATTCTCTCAGGTTTACACAGGAGACTTTCCTCCGTTATGTTCAGACTCTTGCATCCATCTGACTTaGTTCCCGCAAGAAACGAAT | + |
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Preference number: 5 (lower is better) Translates to: DVFSQVYTGDFPPLCSDSCIHLT*FPQETN Trigger: ATTCGTTTCTTGCGGGAACAAAGTCAGATGGATGCA...AGAGTCTGAACATAACGGAGGAAAGTCTCCTGTGTAAACCTGAGAGAATACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS TCA 90 bp | GTCATTCTTACAGACGGAGTTTGTGAACATTTCTGTCAAAGGCTGTaGAACTGCCAGATGTGTGTCTTCTGGACTGATCTTAAAAACGGT | + |
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Preference number: 5 (lower is better) Translates to: VILTDGVCEHFCQRL*NCQMCVFWTDLKNG Trigger: ACCGTTTTTAAGATCAGTCCAGAAGACACACATCTGGCAGTTTCACAGCCTTTGACAGAAATGTTCACAAACTCCGTCTGTAAGAATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000160322.8 |
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| CDS-3UTR CAA 90 bp | CATCTACTCTCTGTTCCTACTTATTTCCTCTCTAATGCAGTGATGGGATACGAATGTATTTCGAGTCAATaGCAATGGCTTTCTCGCAGT | + |
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Preference number: 5 (lower is better) Translates to: HLLSVPTYFLSNAVMGYECISSQ*QWLSRS Trigger: ACTGCGAGAAAGCCATTGCAATTGACTCGAAATACA...TTCGTATCCCATCACTGCATTAGAGAGGAAATAAGTAGGAACAGAGAGTAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS GCA 90 bp | ACACTGGATGGCAACTTCCAAACTTTCTTGTTCATCAGAAGTATATaGATCCATCTGACTTTGTTCCCGCAAGAAACGAATAACTGCATA | + |
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Preference number: 5 (lower is better) Translates to: TLDGNFQTFLFIRSI*IHLTLFPQETNNCI Trigger: TATGCAGTTATTCGTTTCTTGCGGGAACAAAGTCAGATGGATGCATATACTTCTGATGAACAAGAAAGTTTGGAAGTTGCCATCCAGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000160322.8 |
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| CDS CAA 72 bp | GCTGGTCCGCCTTTCCCACATCCTCGGGCACTGAGTTaGAAAGCGGCCGTATGTCATTCTTACAGACGGAGT | + |
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Preference number: 6 (lower is better) Translates to: AGPPFPHPRALS*KAAVCHSYRRS Trigger: ACTCCGTCTGTAAGAATGACATACGGCCGCTTTCAAACTCAGTGCCCGAGGATGTGGGAAAGGCGGACCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000160322.8 |
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| CDS GCA 72 bp | TCCGGATTCTGCTGTTGTATCTGCTGCGCAAACTGCTaGCCCGCTTGGATTAGGCTAGACAGGTCTGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: SGFCCCICCANC*PAWIRLDRSVR Trigger: CCTAACAGACCTGTCTAGCCTAATCCAAGCGGGGCAGCAGTTTGCGCAGCAGATACAACAGCAGAATCCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 |
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| CDS CAA 72 bp | GGCCTCCAACTCCGGCAGCTGGTCCTCCAATGGCATTaGTCATCATCCCTGACATTAGCTGCTGAACTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GLQLRQLVLQWH*SSSLTLAAELE Trigger: CTCAAGTTCAGCAGCTAATGTCAGGGATGATGACAAATGCCATTGGAGGACCAGCTGCCGGAGTTGGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 |
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| CDS CAA 90 bp | GGTCTGTTAGGCCTCCAACTCCGGCAGCTGGTCCTCCAATGGCATTaGTCATCATCCCTGACATTAGCTGCTGAACTTGAGGGTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GLLGLQLRQLVLQWH*SSSLTLAAELEGSA Trigger: TGCAGAACCCTCAAGTTCAGCAGCTAATGTCAGGGATGATGACAAATGCCATTGGAGGACCAGCTGCCGGAGTTGGAGGCCTAACAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 |
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| CDS GCA 72 bp | AGTTCCGGATTCTGCTGTTGTATCTGCTGCGCAAACTaGTGCCCCGCTTGGATTAGGCTAGACAGGTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: SSGFCCCICCAN*CPAWIRLDRSV Trigger: AACAGACCTGTCTAGCCTAATCCAAGCGGGGCAGCAGTTTGCGCAGCAGATACAACAGCAGAATCCGGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 |
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| CDS CAA 72 bp | GCTGGTCCGCCTTTCCCACATCCTCGGGCACTGAGTTaGAAAGCGGCCGTATGTCATTCTTCCAAACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: AGPPFPHPRALS*KAAVCHSSKLS Trigger: AGAAAGTTTGGAAGAATGACATACGGCCGCTTTCAAACTCAGTGCCCGAGGATGTGGGAAAGGCGGACCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159574.2 |
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| CDS GCA 72 bp | CTGCTGAACGATCTGCTCCGGATGTGGTTTCTCAGCTaGTCTATGAGTTCCGGATTCTGCTGTTGTATCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLNDLLRMWFLS*SMSSGFCCCIC Trigger: GCAGATACAACAGCAGAATCCGGAACTCATAGAGCAGCTGAGAAACCACATCCGGAGCAGATCGTTCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044385.14 |
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| CDS CAA 90 bp | CATCCTTCAGCTGGTCCGCCTTTCCCACATCCTCGGGCACTGAGTTaGAAAGCGGCCGTATGTCATTCTTCCAAACTTTCTTGTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: HPSAGPPFPHPRALS*KAAVCHSSKLSCSS Trigger: TGATGAACAAGAAAGTTTGGAAGAATGACATACGGCCGCTTTCAAACTCAGTGCCCGAGGATGTGGGAAAGGCGGACCAGCTGAAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159574.2 |
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| CDS CCA 72 bp | GAGCAGCAGCCCTGTTGCAATAATAAACGGCATTGTTaGGATCCAGTTCTATTGCCTGCGTGTAGCAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: EQQPCCNNKRHC*DPVLLPACSSP Trigger: TGGACTGCTACACGCAGGCAATAGAACTGGATCCCAACAATGCCGTTTATTATTGCAACAGGGCTGCTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 ENSMUST00000160322.8 |
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| CDS GCA 72 bp | GCAATAATAAACGGCATTGTTGGGATCCAGTTCTATTaGCTGCGTGTAGCAGTCCACTGCCGCAGCGTAATT | + |
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Preference number: 6 (lower is better) Translates to: AIINGIVGIQFY*LRVAVHCRSVI Trigger: AATTACGCTGCGGCAGTGGACTGCTACACGCAGGCAATAGAACTGGATCCCAACAATGCCGTTTATTATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 ENSMUST00000160322.8 |
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| CDS CAA 90 bp | CAGCCCTGTTGCAATAATAAACGGCATTGTTGGGATCCAGTTCTATaGCCTGCGTGTAGCAGTCCACTGCCGCAGCGTAATTTTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: QPCCNNKRHCWDPVL*PACSSPLPQRNFLL Trigger: AAGAAGAAAATTACGCTGCGGCAGTGGACTGCTACACGCAGGCAATAGAACTGGATCCCAACAATGCCGTTTATTATTGCAACAGGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 ENSMUST00000160322.8 |
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| CDS TCA 72 bp | ACAGACGGAGTTTGTGAACATTTCTGTCAAAGGCTGTaGAACTGCCAGATGTGTGTCTTCTGGACTGATCTT | + |
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Preference number: 6 (lower is better) Translates to: TDGVCEHFCQRL*NCQMCVFWTDL Trigger: AAGATCAGTCCAGAAGACACACATCTGGCAGTTTCACAGCCTTTGACAGAAATGTTCACAAACTCCGTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000160322.8 |
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| CDS TCA 72 bp | ATTTCGAGTCAATTGCAATGGCTTTCTCGCAGTCCTTaGTTGCGTCTGTGTAGTGACTTAATTTGCTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: ISSQLQWLSRSP*LRLCSDLICFE Trigger: CTCAAAGCAAATTAAGTCACTACACAGACGCAATCAAGGACTGCGAGAAAGCCATTGCAATTGACTCGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 ENSMUST00000160322.8 |
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| CDS GCA 72 bp | TGTAGTGACTTAATTTGCTTTGAGCAGCAGCCCTGTTaGAATAATAAACGGCATTGTTGGGATCCAGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: CSDLICFEQQPC*NNKRHCWDPVL Trigger: TAGAACTGGATCCCAACAATGCCGTTTATTATTGCAACAGGGCTGCTGCTCAAAGCAAATTAAGTCACTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044385.14 ENSMUST00000159574.2 ENSMUST00000160322.8 |
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| CDS CAA 72 bp | GGTCTCCAAACACTGGATGGCAACTTCCAAACTTTCTaGTTCATCAGAAGTATATGCATCCATCTGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: GLQTLDGNFQTF*FIRSICIHLTL Trigger: CAAAGTCAGATGGATGCATATACTTCTGATGAACAAGAAAGTTTGGAAGTTGCCATCCAGTGTTTGGAGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000160322.8 |
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| CDS CAA 90 bp | CTTAAAAACGGTCTCCAAACACTGGATGGCAACTTCCAAACTTTCTaGTTCATCAGAAGTATATGCATCCATCTGACTTTGTTCCCGCAA | + |
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Preference number: 6 (lower is better) Translates to: LKNGLQTLDGNFQTF*FIRSICIHLTLFPQ Trigger: TTGCGGGAACAAAGTCAGATGGATGCATATACTTCTGATGAACAAGAAAGTTTGGAAGTTGCCATCCAGTGTTTGGAGACCGTTTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000160322.8 |
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| CDS CCA 72 bp | TCTTCTGGACTGATCTTAAAAACGGTCTCCAAACACTaGATGGCAACTTCCAAACTTTCTTGTTCATCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSGLILKTVSKH*MATSKLSCSSE Trigger: TTCTGATGAACAAGAAAGTTTGGAAGTTGCCATCCAGTGTTTGGAGACCGTTTTTAAGATCAGTCCAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044385.14 ENSMUST00000160322.8 |
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| CDS CAA 72 bp | TTTGAAAGCGGCCGTATGTCATTCTTCCAAACTTTCTaGTTCATCAGAAGTATATGCATCCATCTGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: FESGRMSFFQTF*FIRSICIHLTL Trigger: CAAAGTCAGATGGATGCATATACTTCTGATGAACAAGAAAGTTTGGAAGAATGACATACGGCCGCTTTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159574.2 |
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