Pregenerated sensors for SGTA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004937Ensembl transcript IDs: ENSMUST00000005067.6, ENSMUST00000218208.2, ENSMUST00000219401.2, ENSMUST00000220317.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACAGGCCACTGGAATAAGGCAGGCGGGGGCACCTGCTGGGACCTaGAACCAGGCGAGGGTGTGGGACGCTGGTGCCCAGCTGGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: AQATGIRQAGAPAGT*NQARVWDAGAQLGL Trigger: CAGCCCCAGCTGGGCACCAGCGTCCCACACCCTCGCCTGGTTGCAGGTCCCAGCAGGTGCCCCCGCCTGCCTTATTCCAGTGGCCTGTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR GCA 90 bp | GTCCTATGTGGCACAGGCCACTGGAATAAGGCAGGCGGGGGCACCTaGTGGGACCTGCAACCAGGCGAGGGTGTGGGACGCTGGTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: VLCGTGHWNKAGGGT*WDLQPGEGVGRWCP Trigger: TGGGCACCAGCGTCCCACACCCTCGCCTGGTTGCAGGTCCCAGCAGGTGCCCCCGCCTGCCTTATTCCAGTGGCCTGTGCCACATAGGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR TCA 90 bp | CGAGGGTGTGGGACGCTGGTGCCCAGCTGGGGCTGGCAGTGGGGATaGGAGTCAGCTACTCAAGTCCCTTTAGGAGGAACCCGGCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: RGCGTLVPSWGWQWG*ESATQVPLGGTRQG Trigger: ACCCTGCCGGGTTCCTCCTAAAGGGACTTGAGTAGCTGACTCTCATCCCCACTGCCAGCCCCAGCTGGGCACCAGCGTCCCACACCCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR CCA 90 bp | GCTGGGCAGAAGTCACAGGCCTCAGTCCTATGTGGCACAGGCCACTaGAATAAGGCAGGCGGGGGCACCTGCTGGGACCTGCAACCAGGC | + |
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Preference number: 1 (lower is better) Translates to: AGQKSQASVLCGTGH*NKAGGGTCWDLQPG Trigger: GCCTGGTTGCAGGTCCCAGCAGGTGCCCCCGCCTGCCTTATTCCAGTGGCCTGTGCCACATAGGACTGAGGCCTGTGACTTCTGCCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR GCA 90 bp | TCACCCCACCCCTCCCTGCAGCTCCTAGGTGGCTGGAGGAACTGGTaGTGGTGTGTCGTCTTCTGTAGACTCCTCCAGGGAGGTGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: SPHPSLQLLGGWRNW*WCVVFCRLLQGGVG Trigger: CCCCACACCTCCCTGGAGGAGTCTACAGAAGACGACACACCAGCACCAGTTCCTCCAGCCACCTAGGAGCTGCAGGGAGGGGTGGGGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR CCA 90 bp | CACTCACCCCACCCCTCCCTGCAGCTCCTAGGTGGCTGGAGGAACTaGTGCTGGTGTGTCGTCTTCTGTAGACTCCTCCAGGGAGGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: HSPHPSLQLLGGWRN*CWCVVFCRLLQGGV Trigger: CACACCTCCCTGGAGGAGTCTACAGAAGACGACACACCAGCACCAGTTCCTCCAGCCACCTAGGAGCTGCAGGGAGGGGTGGGGTGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR CCA 90 bp | TGTGCCCAAGGTGGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTaGCTACCTACCACACACACAGCTCTGACACTATCTGCCAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: CAQGGAAALGGPSSY*LPTTHTALTLSAKA Trigger: GGCTTTGGCAGATAGTGTCAGAGCTGTGTGTGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTGGGCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR CCA 90 bp | ATGAGAGTCAGCTACTCAAGTCCCTTTAGGAGGAACCCGGCAGGGTaGGGCCTGAGACCTGAGGGCCCAGGCTGTCACTCAGTGACTCAC | + |
|
Preference number: 1 (lower is better) Translates to: MRVSYSSPFRRNPAG*GLRPEGPGCHSVTH Trigger: GTGAGTCACTGAGTGACAGCCTGGGCCCTCAGGTCTCAGGCCCCACCCTGCCGGGTTCCTCCTAAAGGGACTTGAGTAGCTGACTCTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR CCA 90 bp | GAGCGTCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTaGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTAC | + |
|
Preference number: 1 (lower is better) Translates to: ERHHCLYSPGTLCPR*RCCPRGPIFLLATY Trigger: GTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGACGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005067.6 |
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| 3UTR GCA 90 bp | CATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTaGTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACACA | + |
|
Preference number: 1 (lower is better) Translates to: HHCLYSPGTLCPRWR*CPRGPIFLLATYHT Trigger: TGTGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR CCA 90 bp | AAAGATGGAGGGGAAGCTGGAAAGAGACACGGATGGTCCACACGCTaGGCAGAAGTCACAGGCCTCAGTCCTATGTGGCACAGGCCACTG | + |
|
Preference number: 1 (lower is better) Translates to: KDGGEAGKRHGWSTR*AEVTGLSPMWHRPL Trigger: CAGTGGCCTGTGCCACATAGGACTGAGGCCTGTGACTTCTGCCCAGCGTGTGGACCATCCGTGTCTCTTTCCAGCTTCCCCTCCATCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR CCA 90 bp | GCTGATGGCTGTAAAGATGGAGGGGAAGCTGGAAAGAGACACGGATaGTCCACACGCTGGGCAGAAGTCACAGGCCTCAGTCCTATGTGG | + |
|
Preference number: 1 (lower is better) Translates to: ADGCKDGGEAGKRHG*STRWAEVTGLSPMW Trigger: CCACATAGGACTGAGGCCTGTGACTTCTGCCCAGCGTGTGGACCATCCGTGTCTCTTTCCAGCTTCCCCTCCATCTTTACAGCCATCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR GCA 90 bp | AGATGGTTCTGGTGGCTGCTTCAGGGCCGATACCCCGAAACTCCCTaGCAACCCCAGACATTGAATTCCCATGAGATCAAGGATAGGATG | + |
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Preference number: 1 (lower is better) Translates to: RWFWWLLQGRYPETP*QPQTLNSHEIKDRM Trigger: CATCCTATCCTTGATCTCATGGGAATTCAATGTCTGGGGTTGGCAGGGAGTTTCGGGGTATCGGCCCTGAAGCAGCCACCAGAACCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGGTGGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACAGGCGGGGGCACCTGCTaGGACCTGCAACCAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: QGGAAALGGPSSYWLPTTGGGTC*DLQPGE Trigger: CTCGCCTGGTTGCAGGTCCCAGCAGGTGCCCCCGCC...TGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACACACACAGCTGGCGGGGGCACCTGCTaGGACCTGCAACCAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: AAALGGPSSYWLPTTHTAGGGTC*DLQPGE Trigger: CTCGCCTGGTTGCAGGTCCCAGCAGGTGCCCCCGCC...AGCTGTGTGTGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR GCA 90 bp | CACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCTCGGGGTGTGGGACGCTGGTaGCCAGCTGGGGCTGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: HCLYSPGTLCPRWRCCPRGVGRW*PAGAGS Trigger: ACTGCCAGCCCCAGCTGGGCACCAGCGTCCCACACC...CCGAGGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR GCA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCGCAGGCGGGGGCACCTaGTGGGACCTGCAACCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SSLSLFSRHSVPKVALLPAGGGT*WDLQPG Trigger: GCCTGGTTGCAGGTCCCAGCAGGTGCCCCCGCCTGC...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGATGGAGGGGAAGCTGGAAAGAGACACGGATGGTCCACACGCTGGGCAGAAGAGGGTGTGGGACGCTaGTGCCCAGCTGGGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: KDGGEAGKRHGWSTRWAEEGVGR*CPAGAG Trigger: GCCAGCCCCAGCTGGGCACCAGCGTCCCACACCCTC...TTCTGCCCAGCGTGTGGACCATCCGTGTCTCTTTCCAGCTTCCCCTCCATCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGCCAAGAATGTGTGTGGGAACATCCACACCCTCACTCAGACTGACCCCAGAGGGTGTGGGACGCTaGTGCCCAGCTGGGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LGPRMCVGTSTPSLRLTPEGVGR*CPAGAG Trigger: GCCAGCCCCAGCTGGGCACCAGCGTCCCACACCCTC...TGGGGTCAGTCTGAGTGAGGGTGTGGATGTTCCCACACACATTCTTGGCCCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACACACACAGCTACCGAAGGGGAGGGATaGAGGAAAACACAAGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: AAALGGPSSYWLPTTHTATEGEG*RKTQGG Trigger: CCCACCTTGTGTTTTCCTTCATCCCTCCCCTTCGGT...AGCTGTGTGTGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCTCGGGGCTGGCAGTGGGGATaGGAGTCAGCTACTCAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: HCLYSPGTLCPRWRCCPRGWQWG*ESATQV Trigger: GACTTGAGTAGCTGACTCTCATCCCCACTGCCAGCC...CCGAGGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATGGTGCTGGGTGTGGGACGCTGGTaGCCAGCTGGGGCTGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: MTQMGQCLCLLPRLRMVLGVGRW*PAGAGS Trigger: ACTGCCAGCCCCAGCTGGGCACCAGCGTCCCACACC...CAGCACCATCCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATGGTGCTGAGGAACCCGGCAGGGTaGGGCCTGAGACCTGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: MTQMGQCLCLLPRLRMVLRNPAG*GLRPEG Trigger: GCCCTCAGGTCTCAGGCCCCACCCTGCCGGGTTCCT...CAGCACCATCCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGATGGAGGGGAAGCTGGAAAGAGACACGGATGGTCCACACGCTGGGCAGAAAACCAGGCGAGGGTGTaGGACGCTGGTGCCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KDGGEAGKRHGWSTRWAENQARV*DAGAQL Trigger: CAGCTGGGCACCAGCGTCCCACACCCTCGCCTGGTT...TTCTGCCCAGCGTGTGGACCATCCGTGTCTCTTTCCAGCTTCCCCTCCATCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR TCA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCCAGGCTGTCACTCAGTaGCTCACACTCACCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: SSLSLFSRHSVPKVALLPQAVTQ*LTLTPP Trigger: GGGTGGGGTGAGTGTGAGTCACTGAGTGACAGCCTG...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGCTGGACTGGACACAAAGTTAGGATTGGCTGATGGCTGTAAAGATGGAGGGGTGGGGCCTGAGACCTaGGGGCCCAGGCTGTCACTC | + |
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Preference number: 2 (lower is better) Translates to: GAGLDTKLGLADGCKDGGVGPET*GPRLSL Trigger: GAGTGACAGCCTGGGCCCTCAGGTCTCAGGCCCCAC...CCCTCCATCTTTACAGCCATCAGCCAATCCTAACTTTGTGTCCAGTCCAGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGCTGGCAGTGGGGATGAGAGTCAGCTACTCAAGTCCCTTTAGGAGGAACCCTGCAGCTCCTAGGTaGCTGGAGGAACTGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LGLAVGMRVSYSSPFRRNPAAPR*LEELVL Trigger: CAGCACCAGTTCCTCCAGCCACCTAGGAGCTGCAGG...GTTCCTCCTAAAGGGACTTGAGTAGCTGACTCTCATCCCCACTGCCAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGATGGAGGGGAAGCTGGAAAGAGACACGGATGGTCCACACGCTGGGCAGAACAGGCTGTCACTCAGTaGCTCACACTCACCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: KDGGEAGKRHGWSTRWAEQAVTQ*LTLTPP Trigger: GGGTGGGGTGAGTGTGAGTCACTGAGTGACAGCCTG...TTCTGCCCAGCGTGTGGACCATCCGTGTCTCTTTCCAGCTTCCCCTCCATCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGGTGGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACAGAGTCCGTCTTAACATaGAGGTCCAGTTTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: QGGAAALGGPSSYWLPTTESVLT*RSSFSL Trigger: GAGAGAGAAACTGGACCTGCATGTTAAGACGGACTC...TGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR TCA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCACCGAAGGGGAGGGATaGAGGAAAACACAAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SSLSLFSRHSVPKVALLPTEGEG*RKTQGG Trigger: CCCACCTTGTGTTTTCCTTCATCCCTCCCCTTCGGT...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATGGTGCTGCCTGCAGCTCCTAGGTaGCTGGAGGAACTGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: MTQMGQCLCLLPRLRMVLPAAPR*LEELVL Trigger: CAGCACCAGTTCCTCCAGCCACCTAGGAGCTGCAGG...CAGCACCATCCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCCAACCCCAGACATTGAATTCCCATGAGATCAAGGATAGGATGACACAGAACCAGGCGAGGGTGTaGGACGCTGGTGCCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: PCQPQTLNSHEIKDRMTQNQARV*DAGAQL Trigger: CAGCTGGGCACCAGCGTCCCACACCCTCGCCTGGTT...CTGTGTCATCCTATCCTTGATCTCATGGGAATTCAATGTCTGGGGTTGGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTGGACTGGACACAAAGTTAGGATTGGCTGATGGCTGTAAAGATGGAGGGTGTGGCACAGGCCACTaGAATAAGGCAGGCGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: GAGLDTKLGLADGCKDGGCGTGH*NKAGGG Trigger: GCCCCCGCCTGCCTTATTCCAGTGGCCTGTGCCACA...CCCTCCATCTTTACAGCCATCAGCCAATCCTAACTTTGTGTCCAGTCCAGCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCCAACAAAGATGGTTCTaGTGGCTGCTTCAGGGCCGA | + |
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Preference number: 2 (lower is better) Translates to: SSLSLFSRHSVPKVALLPQQRWF*WLLQGR Trigger: TCGGCCCTGAAGCAGCCACCAGAACCATCTTTGTTG...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR CAA 90 bp | GCTGCCCAGGCTGAGGATGGTGCTGGACTGGACACAAAGTTAGGATaGGCTGATGGCTGTAAAGATGGAGGGGAAGCTGGAAAGAGACAC | + |
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Preference number: 2 (lower is better) Translates to: AAQAEDGAGLDTKLG*ADGCKDGGEAGKRH Trigger: GTGTCTCTTTCCAGCTTCCCCTCCATCTTTACAGCCATCAGCCAATCCTAACTTTGTGTCCAGTCCAGCACCATCCTCAGCCTGGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGATAGGATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGGGCTGGCAGTGGGGATaGGAGTCAGCTACTCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: KDRMTQMGQCLCLLPRLRGWQWG*ESATQV Trigger: GACTTGAGTAGCTGACTCTCATCCCCACTGCCAGCC...CCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCATCCTATCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGCCAAGAATGTGTGTGGGAACATCCACACCCTCACTCAGACTGACCCCAAGATGGAGGGGAAGCTaGAAAGAGACACGGATGGTC | + |
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Preference number: 2 (lower is better) Translates to: LGPRMCVGTSTPSLRLTPRWRGS*KETRMV Trigger: GACCATCCGTGTCTCTTTCCAGCTTCCCCTCCATCT...TGGGGTCAGTCTGAGTGAGGGTGTGGATGTTCCCACACACATTCTTGGCCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGGGCCAAGAATGTGTGTGGGAACATCCACACCCTCACTCAGACTGACCCCAGCCAACCCCAGACATTaGATTCCCATGAGATCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LGPRMCVGTSTPSLRLTPANPRH*IPMRSR Trigger: CCTTGATCTCATGGGAATTCAATGTCTGGGGTTGGC...TGGGGTCAGTCTGAGTGAGGGTGTGGATGTTCCCACACACATTCTTGGCCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR GCA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCGAGTCCGTCTTAACATaGAGGTCCAGTTTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SSLSLFSRHSVPKVALLPESVLT*RSSFSL Trigger: GAGAGAGAAACTGGACCTGCATGTTAAGACGGACTC...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCAAGGAAAACACAAGGTaGGGACGAGTCCGTCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: SSLSLFSRHSVPKVALLPKENTR*GRVRLN Trigger: GTTAAGACGGACTCGTCCCCACCTTGTGTTTTCCTT...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR TCA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCAGATCAAGGATAGGATaGCACAGATGGGTCAATGTC | + |
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Preference number: 2 (lower is better) Translates to: SSLSLFSRHSVPKVALLPRSRIG*HRWVNV Trigger: GACATTGACCCATCTGTGTCATCCTATCCTTGATCT...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR-3UTR CCA 90 bp | CTACTGGCTACCTACCACACACACAGCTCTGACACTATCTGCCAAAGCCTGATGAAGGAAAACACAAGGTaGGGACGAGTCCGTCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: LLATYHTHSSDTICQSLMKENTR*GRVRLN Trigger: GTTAAGACGGACTCGTCCCCACCTTGTGTTTTCCTT...CATCAGGCTTTGGCAGATAGTGTCAGAGCTGTGTGTGTGGTAGGTAGCCAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR GCA 72 bp | GGCACAGGCCACTGGAATAAGGCAGGCGGGGGCACCTaGTGGGACCTGCAACCAGGCGAGGGTGTGGGACGC | + |
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Preference number: 3 (lower is better) Translates to: GTGHWNKAGGGT*WDLQPGEGVGR Trigger: GCGTCCCACACCCTCGCCTGGTTGCAGGTCCCAGCAGGTGCCCCCGCCTGCCTTATTCCAGTGGCCTGTGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR CCA 72 bp | ACAGGCCACTGGAATAAGGCAGGCGGGGGCACCTGCTaGGACCTGCAACCAGGCGAGGGTGTGGGACGCTGG | + |
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Preference number: 3 (lower is better) Translates to: TGHWNKAGGGTC*DLQPGEGVGRW Trigger: CCAGCGTCCCACACCCTCGCCTGGTTGCAGGTCCCAGCAGGTGCCCCCGCCTGCCTTATTCCAGTGGCCTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR GCA 72 bp | CTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTaGTGCCCTCGGGGGCCCATCTTCCTACTGGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: LYSPGTLCPRWR*CPRGPIFLLAT Trigger: GGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| 3UTR GCA 72 bp | GAGCGTCATCACTGTCTTTATTCTCCAGGCACTCTGTaGCCAAGGTGGCGCTGCTGCCCTCGGGGGCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: ERHHCLYSPGTL*PRWRCCPRGPI Trigger: GATGGGCCCCCGAGGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGACGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005067.6 |
||
| 3UTR CCA 72 bp | GGTGGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTaGCTACCTACCACACACACAGCTCTGACACTATCT | + |
|
Preference number: 3 (lower is better) Translates to: GGAAALGGPSSY*LPTTHTALTLS Trigger: AGATAGTGTCAGAGCTGTGTGTGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| 3UTR CCA 72 bp | CACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTaGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: HCLYSPGTLCPR*RCCPRGPIFLL Trigger: CAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| 3UTR GCA 72 bp | ACTCAGACTGACCCCAACAAAGATGGTTCTGGTGGCTaGTTCAGGGCCGATACCCCGAAACTCCCTGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: TQTDPNKDGSGG*FRADTPKLPAN Trigger: GTTGGCAGGGAGTTTCGGGGTATCGGCCCTGAAGCAGCCACCAGAACCATCTTTGTTGGGGTCAGTCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| 3UTR GCA 72 bp | AGGAAAACACAAGGTGGGGACGAGTCCGTCTTAACATaGAGGTCCAGTTTCTCTCTCGAGCTGCCCGACGGA | + |
|
Preference number: 3 (lower is better) Translates to: RKTQGGDESVLT*RSSFSLELPDG Trigger: TCCGTCGGGCAGCTCGAGAGAGAAACTGGACCTGCATGTTAAGACGGACTCGTCCCCACCTTGTGTTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| 3UTR GCA 72 bp | TGGTGGCTGCTTCAGGGCCGATACCCCGAAACTCCCTaGCAACCCCAGACATTGAATTCCCATGAGATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: WWLLQGRYPETP*QPQTLNSHEIK Trigger: CTTGATCTCATGGGAATTCAATGTCTGGGGTTGGCAGGGAGTTTCGGGGTATCGGCCCTGAAGCAGCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGGCCAAGAATGTGTGTGGGAACATCCACACCCTCACTCAGACTGACCCCATGCCAACCCCAGACATaGAATTCCCATGAGATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGPRMCVGTSTPSLRLTPCQPQT*NSHEIK Trigger: CTTGATCTCATGGGAATTCAATGTCTGGGGTTGGCA...TGGGGTCAGTCTGAGTGAGGGTGTGGATGTTCCCACACACATTCTTGGCCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| 3UTR TCA 72 bp | CACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTaGGGATGGTGCTGGACTGGACACAAAGTTAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: HRWVNVYVCCPG*GWCWTGHKVRI Trigger: AATCCTAACTTTGTGTCCAGTCCAGCACCATCCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| 3UTR TCA 72 bp | CATCTTCCTACTGGCTACCTACCACACACACAGCTCTaGCACTATCTGCCAAAGCCTGATGCCATCATGACC | + |
|
Preference number: 3 (lower is better) Translates to: HLPTGYLPHTQL*HYLPKPDAIMT Trigger: GGTCATGATGGCATCAGGCTTTGGCAGATAGTGTCAGAGCTGTGTGTGTGGTAGGTAGCCAGTAGGAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGTGGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACAGTTGGCCCGCCTGGATaGGGCTGGCCAGGTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGGAAALGGPSSYWLPTTVGPPG*GWPGHS Trigger: AGAGTGACCTGGCCAGCCTCATCCAGGCGGGCCAAC...TGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | GGCGGGGGCACCTGCTGGGACCTGCAACCAGGCGAGGGTGTGGGACGCTGGTGCTTCTGCTGCTGCATCTaGTGTGCAAACTGTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGGTCWDLQPGEGVGRWCFCCCI*CANCWP Trigger: GGGCCAACAGTTTGCACAGCAGATGCAGCAGCAGAA...GCACCAGCGTCCCACACCCTCGCCTGGTTGCAGGTCCCAGCAGGTGCCCCCGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | GGCGGGGGCACCTGCTGGGACCTGCAACCAGGCGAGGGTGTGGGACGCTGGTGCCTGCTCCACAAACTCTaGGTTCTGCTGCTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGGTCWDLQPGEGVGRWCLLHKL*VLLLHL Trigger: CAGATGCAGCAGCAGAACCCAGAGTTTGTGGAGCAG...GCACCAGCGTCCCACACCCTCGCCTGGTTGCAGGTCCCAGCAGGTGCCCCCGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACACACACAGCTGTTGGCCCGCCTGGATaGGGCTGGCCAGGTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAALGGPSSYWLPTTHTAVGPPG*GWPGHS Trigger: AGAGTGACCTGGCCAGCCTCATCCAGGCGGGCCAAC...AGCTGTGTGTGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACACACACAGCTCTGGCCAGGTCACTCTaGTGCGGACTGCTGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAALGGPSSYWLPTTHTALARSL*CGLLPG Trigger: GCCAGGCAGCAGTCCGCAGCAGAGTGACCTGGCCAG...AGCTGTGTGTGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | GATGGTCCACACGCTGGGCAGAAGTCACAGGCCTCAGTCCTATGTGGCACAGGCCGGCTGCGCACCACCTaGCTCCGGATCTGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: DGPHAGQKSQASVLCGTGRLRTT*LRICST Trigger: TGTGGAGCAGATCCGGAGCCAGGTGGTGCGCAGCCG...GCCTGTGCCACATAGGACTGAGGCCTGTGACTTCTGCCCAGCGTGTGGACCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | CACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCTCGGCTGCGGACTGCTGCCTaGCGTGCCCAGAGGGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: HCLYSPGTLCPRWRCCPRLRTAA*RAQRVM Trigger: CATAACCCTCTGGGCACGCCAGGCAGCAGTCCGCAG...CCGAGGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCCTGGCCAGGTCACTCTaGTGCGGACTGCTGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLSLFSRHSVPKVALLPLARSL*CGLLPG Trigger: GCCAGGCAGCAGTCCGCAGCAGAGTGACCTGGCCAG...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGTGGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACATGCCGCAACTGGCCATaGAGGAACTGGATGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGGAAALGGPSSYWLPTTCRNWP*RNWMMA Trigger: TGCCATCATCCAGTTCCTCCATGGCCAGTTGCGGCA...TGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR TCA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCGCGCTCTGCCTCAGCTaGGTCCTCTTCAGAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLSLFSRHSVPKVALLPALCLS*VLFRGW Trigger: CCACCCTCTGAAGAGGACTCAGCTGAGGCAGAGCGC...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACACACACAGCTCATTACCTTCCGTTTTaGGGCGCTCTGCCTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAALGGPSSYWLPTTHTAHYLPF*GALPQL Trigger: CAGCTGAGGCAGAGCGCCTCAAAACGGAAGGTAATG...AGCTGTGTGTGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACACACACAGCTACCTGGCTCCGGATCTaGTCCACAAACTCTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAALGGPSSYWLPTTHTATWLRI*STNSGF Trigger: GAACCCAGAGTTTGTGGAGCAGATCCGGAGCCAGGT...AGCTGTGTGTGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGTGGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACATGCTTCAAATATCTCTaGCAGGGTCTGGGGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGGAAALGGPSSYWLPTTCFKYL*QGLGES Trigger: GCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCA...TGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTGGCAGTGGGGATGAGAGTCAGCTACTCAAGTCCCTTTAGGAGGAACCTGCGGACTGCTGCCTaGCGTGCCCAGAGGGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: LGLAVGMRVSYSSPFRRNLRTAA*RAQRVM Trigger: CATAACCCTCTGGGCACGCCAGGCAGCAGTCCGCAG...GTTCCTCCTAAAGGGACTTGAGTAGCTGACTCTCATCCCCACTGCCAGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGTGGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACACTGCTCCACAAACTCTaGGTTCTGCTGCTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGGAAALGGPSSYWLPTTLLHKL*VLLLHL Trigger: CAGATGCAGCAGCAGAACCCAGAGTTTGTGGAGCAG...TGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | AAAGATGGAGGGGAAGCTGGAAAGAGACACGGATGGTCCACACGCTGGGCAGAACGGCTGCGCACCACCTaGCTCCGGATCTGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KDGGEAGKRHGWSTRWAERLRTT*LRICST Trigger: TGTGGAGCAGATCCGGAGCCAGGTGGTGCGCAGCCG...TTCTGCCCAGCGTGTGGACCATCCGTGTCTCTTTCCAGCTTCCCCTCCATCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACACACACAGCTTTCTGCTGCTGCATCTaGTGTGCAAACTGTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAALGGPSSYWLPTTHTAFCCCI*CANCWP Trigger: GGGCCAACAGTTTGCACAGCAGATGCAGCAGCAGAA...AGCTGTGTGTGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGTGGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACAAACTCTGGGTTCTGCTaGTGCATCTGCTGTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QGGAAALGGPSSYWLPTTNSGFC*CICCAN Trigger: GTTTGCACAGCAGATGCAGCAGCAGAACCCAGAGTT...TGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCCCACCGTGCCGCAACTaGCCATGGAGGAACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSLSLFSRHSVPKVALLPPPCRN*PWRNWM Trigger: CATCCAGTTCCTCCATGGCCAGTTGCGGCACGGTGG...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGTGGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACAATGAGCTGCTGTAGCTaGGGGCTGTTCATTAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGGAAALGGPSSYWLPTTMSCCS*GLFIKL Trigger: GAGCTTAATGAACAGCCCCCAGCTACAGCAGCTCAT...TGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTGGCAGTGGGGATGAGAGTCAGCTACTCAAGTCCCTTTAGGAGGAACAACTGTTGGCCCGCCTaGATGAGGCTGGCCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLAVGMRVSYSSPFRRNNCWPA*MRLARS Trigger: TGACCTGGCCAGCCTCATCCAGGCGGGCCAACAGTT...GTTCCTCCTAAAGGGACTTGAGTAGCTGACTCTCATCCCCACTGCCAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | CACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCTCGGGTATGCCACAGCCTCTaGATGCTTGTTCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HCLYSPGTLCPRWRCCPRVCHSL*MLVQAG Trigger: TCCAGCCTGAACAAGCATGCAGAGGCTGTGGCATAC...CCGAGGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCCTGCTGCATCTGCTGTaGAAACTGTTGGCCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLSLFSRHSVPKVALLPLLHLL*KLLARL Trigger: CAGGCGGGCCAACAGTTTGCACAGCAGATGCAGCAG...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACACACACAGCTACAAACTCTGGGTTCTaGTGCTGCATCTGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAALGGPSSYWLPTTHTATNSGF*CCICCA Trigger: TGCACAGCAGATGCAGCAGCAGAACCCAGAGTTTGT...AGCTGTGTGTGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGTGGCGCTGCTGCCCTCGGGGGCCCATCTTCCTACTGGCTACCTACCACAGTGGCATCTCCTTGCTaGAAGTGGCTGCTTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: QGGAAALGGPSSYWLPTTVASPC*KWLLQI Trigger: TATTTGAAGCAGCCACTTCCAGCAAGGAGATGCCAC...TGTGGTAGGTAGCCAGTAGGAAGATGGGCCCCCGAGGGCAGCAGCGCCACCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218208.2 |
||
| CDS-3UTR TCA 90 bp | GGTGCTGGACTGGACACAAAGTTAGGATTGGCTGATGGCTGTAAAGATGGAGGGGCGCTCTGCCTCAGCTaGGTCCTCTTCAGAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GAGLDTKLGLADGCKDGGALCLS*VLFRGW Trigger: CCACCCTCTGAAGAGGACTCAGCTGAGGCAGAGCGC...CCCTCCATCTTTACAGCCATCAGCCAATCCTAACTTTGTGTCCAGTCCAGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | GATGGTCCACACGCTGGGCAGAAGTCACAGGCCTCAGTCCTATGTGGCACAGGCTCTGGGTTCTGCTGCTaGATCTGCTGTGCAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DGPHAGQKSQASVLCGTGSGFCC*ICCANC Trigger: ACAGTTTGCACAGCAGATGCAGCAGCAGAACCCAGA...GCCTGTGCCACATAGGACTGAGGCCTGTGACTTCTGCCCAGCGTGTGGACCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTGGCAGTGGGGATGAGAGTCAGCTACTCAAGTCCCTTTAGGAGGAACGCTGTCTCCAGACACTaGATGGCAACCTCTAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLAVGMRVSYSSPFRRNAVSRH*MATSRL Trigger: GAGCCTAGAGGTTGCCATCCAGTGTCTGGAGACAGC...GTTCCTCCTAAAGGGACTTGAGTAGCTGACTCTCATCCCCACTGCCAGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR TCA 90 bp | ATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATGGTGCTGCATGGAGGAACTGGATaGTGGCATAGGCCAGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MTQMGQCLCLLPRLRMVLHGGTG*WHRPGA Trigger: AGCGCCTGGCCTATGCCATCATCCAGTTCCTCCATG...CAGCACCATCCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | ATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATGGTGCTGCTGCTGCATCTGCTGTaGAAACTGTTGGCCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MTQMGQCLCLLPRLRMVLLLHLL*KLLARL Trigger: CAGGCGGGCCAACAGTTTGCACAGCAGATGCAGCAG...CAGCACCATCCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | CTAGGGCCAAGAATGTGTGTGGGAACATCCACACCCTCACTCAGACTGACCCCAACCTGGCTCCGGATCTaGTCCACAAACTCTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGPRMCVGTSTPSLRLTPTWLRI*STNSGF Trigger: GAACCCAGAGTTTGTGGAGCAGATCCGGAGCCAGGT...TGGGGTCAGTCTGAGTGAGGGTGTGGATGTTCCCACACACATTCTTGGCCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | AAAGATGGAGGGGAAGCTGGAAAGAGACACGGATGGTCCACACGCTGGGCAGAATGCCGCAACTGGCCATaGAGGAACTGGATGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KDGGEAGKRHGWSTRWAECRNWP*RNWMMA Trigger: TGCCATCATCCAGTTCCTCCATGGCCAGTTGCGGCA...TTCTGCCCAGCGTGTGGACCATCCGTGTCTCTTTCCAGCTTCCCCTCCATCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | AAGGATAGGATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGCCACCGTGCCGCAACTaGCCATGGAGGAACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KDRMTQMGQCLCLLPRLRPPCRN*PWRNWM Trigger: CATCCAGTTCCTCCATGGCCAGTTGCGGCACGGTGG...CCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCATCCTATCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTGGCAGTGGGGATGAGAGTCAGCTACTCAAGTCCCTTTAGGAGGAACTGCTTCAAATATCTCTaGCAGGGTCTGGGGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLAVGMRVSYSSPFRRNCFKYL*QGLGES Trigger: GCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCA...GTTCCTCCTAAAGGGACTTGAGTAGCTGACTCTCATCCCCACTGCCAGCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CCA 90 bp | AAGGATAGGATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGAACTGTTGGCCCGCCTaGATGAGGCTGGCCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KDRMTQMGQCLCLLPRLRNCWPA*MRLARS Trigger: TGACCTGGCCAGCCTCATCCAGGCGGGCCAACAGTT...CCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCATCCTATCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR TCA 90 bp | GGTGCTGGACTGGACACAAAGTTAGGATTGGCTGATGGCTGTAAAGATGGAGGGCATGGAGGAACTGGATaGTGGCATAGGCCAGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGLDTKLGLADGCKDGGHGGTG*WHRPGA Trigger: AGCGCCTGGCCTATGCCATCATCCAGTTCCTCCATG...CCCTCCATCTTTACAGCCATCAGCCAATCCTAACTTTGTGTCCAGTCCAGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR TCA 90 bp | CACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCTCGGTCAGCTCTGCAATCTTaGGGTTGGACTTGTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HCLYSPGTLCPRWRCCPRSALQS*GWTCMC Trigger: ACACATACAAGTCCAACCTCAAGATTGCAGAGCTGA...CCGAGGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR GCA 90 bp | ACACGCTGGGCAGAAGTCACAGGCCTCAGTCCTATGTGGCACAGGCCACTGGAACTTGCTGGAAGTGGCTaGTTCAAATATCTCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRWAEVTGLSPMWHRPLELAGSG*FKYLWQ Trigger: CTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAG...TTCCAGTGGCCTGTGCCACATAGGACTGAGGCCTGTGACTTCTGCCCAGCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR GCA 90 bp | ATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATGGTGCTGGTGGCATCTCCTGCTTaGTGGAAGTGGCTGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MTQMGQCLCLLPRLRMVLVASPA*WKWLLQ Trigger: TTGAAGCAGCCACTTCCAGCAAGCAGGAGATGCCAC...CAGCACCATCCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005067.6 |
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| 3UTR CAA 72 bp | GCTGAGGATGGTGCTGGACTGGACACAAAGTTAGGATaGGCTGATGGCTGTAAAGATGGAGGGGAAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AEDGAGLDTKLG*ADGCKDGGEAG Trigger: TCCAGCTTCCCCTCCATCTTTACAGCCATCAGCCAATCCTAACTTTGTGTCCAGTCCAGCACCATCCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| 3UTR CAA 72 bp | GGCCGATACCCCGAAACTCCCTGCCAACCCCAGACATaGAATTCCCATGAGATCAAGGATAGGATGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: GRYPETPCQPQT*NSHEIKDRMTQ Trigger: CTGTGTCATCCTATCCTTGATCTCATGGGAATTCAATGTCTGGGGTTGGCAGGGAGTTTCGGGGTATCGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR GCA 90 bp | AAGGATAGGATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGGTATGCCACAGCCTCTaGATGCTTGTTCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KDRMTQMGQCLCLLPRLRVCHSL*MLVQAG Trigger: TCCAGCCTGAACAAGCATGCAGAGGCTGTGGCATAC...CCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCATCCTATCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR GCA 90 bp | GGTGCTGGACTGGACACAAAGTTAGGATTGGCTGATGGCTGTAAAGATGGAGGGACAAACTCTGGGTTCTaGTGCTGCATCTGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAGLDTKLGLADGCKDGGTNSGF*CCICCA Trigger: TGCACAGCAGATGCAGCAGCAGAACCCAGAGTTTGT...CCCTCCATCTTTACAGCCATCAGCCAATCCTAACTTTGTGTCCAGTCCAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR CCA 90 bp | AAGGATAGGATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATGAGCTGCTGTAGCTaGGGGCTGTTCATTAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KDRMTQMGQCLCLLPRLRMSCCS*GLFIKL Trigger: GAGCTTAATGAACAGCCCCCAGCTACAGCAGCTCAT...CCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCATCCTATCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR TCA 90 bp | ATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATGGTGCTGTCAGCTCTGCAATCTTaGGGTTGGACTTGTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MTQMGQCLCLLPRLRMVLSALQS*GWTCMC Trigger: ACACATACAAGTCCAACCTCAAGATTGCAGAGCTGA...CAGCACCATCCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | CTACTGGCTACCTACCACACACACAGCTCTGACACTATCTGCCAAAGCCTGATGCTTGCTGGAAGTGGCTaGTTCAAATATCTCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLATYHTHSSDTICQSLMLAGSG*FKYLWQ Trigger: CTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAG...CATCAGGCTTTGGCAGATAGTGTCAGAGCTGTGTGTGTGGTAGGTAGCCAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGCCAACCCCAGACATTGAATTCCCATGAGATCAAGGATAGGATGACACAGTCTGGGTTCTGCTGCTaGATCTGCTGTGCAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PCQPQTLNSHEIKDRMTQSGFCC*ICCANC Trigger: ACAGTTTGCACAGCAGATGCAGCAGCAGAACCCAGA...CTGTGTCATCCTATCCTTGATCTCATGGGAATTCAATGTCTGGGGTTGGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR GCA 90 bp | CCCTGCCAACCCCAGACATTGAATTCCCATGAGATCAAGGATAGGATGACACAGAACTCTGGGTTCTGCTaGTGCATCTGCTGTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PCQPQTLNSHEIKDRMTQNSGFC*CICCAN Trigger: GTTTGCACAGCAGATGCAGCAGCAGAACCCAGAGTT...CTGTGTCATCCTATCCTTGATCTCATGGGAATTCAATGTCTGGGGTTGGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS GCA 90 bp | GCAAACTGTTGGCCCGCCTGGATGAGGCTGGCCAGGTCACTCTGCTaGGGACTGCTGCCTGGCGTGCCCAGAGGGTTATGGCCTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ANCWPAWMRLARSLC*GLLPGVPRGLWPPE Trigger: CTCCGGAGGCCATAACCCTCTGGGCACGCCAGGCAGCAGTCCGCAGCAGAGTGACCTGGCCAGCCTCATCCAGGCGGGCCAACAGTTTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS CCA 90 bp | GGCCCATGCGGCCATAGGCCTTGCTATACCCAGGGTCGATGCCAATaGCGCGCTCGCAGTCCTGCACGGCCCCCACGTAGTTCCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPCGHRPCYTQGRCQ*RARSPARPPRSSPA Trigger: AGCTGGGGAACTACGTGGGGGCCGTGCAGGACTGCGAGCGCGCCATTGGCATCGACCCTGGGTATAGCAAGGCCTATGGCCGCATGGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS GCA 90 bp | GTGCAAGGCCCATGCGGCCATAGGCCTTGCTATACCCAGGGTCGATaGCAATGGCGCGCTCGCAGTCCTGCACGGCCCCCACGTAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VQGPCGHRPCYTQGR*QWRARSPARPPRSS Trigger: GGAACTACGTGGGGGCCGTGCAGGACTGCGAGCGCGCCATTGGCATCGACCCTGGGTATAGCAAGGCCTATGGCCGCATGGGCCTTGCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS GCA 90 bp | TGTGCAAACTGTTGGCCCGCCTGGATGAGGCTGGCCAGGTCACTCTaGTGCGGACTGCTGCCTGGCGTGCCCAGAGGGTTATGGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CANCWPAWMRLARSL*CGLLPGVPRGLWPP Trigger: CGGAGGCCATAACCCTCTGGGCACGCCAGGCAGCAGTCCGCAGCAGAGTGACCTGGCCAGCCTCATCCAGGCGGGCCAACAGTTTGCACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS CCA 90 bp | CGCCTGGATGAGGCTGGCCAGGTCACTCTGCTGCGGACTGCTGCCTaGCGTGCCCAGAGGGTTATGGCCTCCGGAGATCATGCCCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: RLDEAGQVTLLRTAA*RAQRVMASGDHARH Trigger: ATGTCGGGCATGATCTCCGGAGGCCATAACCCTCTGGGCACGCCAGGCAGCAGTCCGCAGCAGAGTGACCTGGCCAGCCTCATCCAGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS CCA 90 bp | CACTGTCCTCCAGCGTCACCCCGAAGGCTGTCTCCAGACACTGGATaGCAACCTCTAGGCTCTCCTGGGCGTCACACGAGAGCCCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: HCPPASPRRLSPDTG*QPLGSPGRHTRAHR Trigger: ACGGTGGGCTCTCGTGTGACGCCCAGGAGAGCCTAGAGGTTGCCATCCAGTGTCTGGAGACAGCCTTCGGGGTGACGCTGGAGGACAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 ENSMUST00000220317.2 |
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| CDS CCA 90 bp | TGCTGCTCCTCATGGCTGGCACTGGGTGTCCGGCTGCGCACCACCTaGCTCCGGATCTGCTCCACAAACTCTGGGTTCTGCTGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: CCSSWLALGVRLRTT*LRICSTNSGFCCCI Trigger: GATGCAGCAGCAGAACCCAGAGTTTGTGGAGCAGATCCGGAGCCAGGTGGTGCGCAGCCGGACACCCAGTGCCAGCCATGAGGAGCAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS GCA 90 bp | GTGGTGTCCTGTCAGGGGCCCGCGGGTCCTGTGGCATCTCCTGCTTaGTGGAAGTGGCTGCTTCAAATATCTCTGGCAGGGTCTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVSCQGPAGPVASPA*WKWLLQISLAGSGG Trigger: TCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGCAGGAGATGCCACAGGACCCGCGGGCCCCTGACAGGACACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000220317.2 |
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| CDS GCA 90 bp | TGGCTGGCACTGGGTGTCCGGCTGCGCACCACCTGGCTCCGGATCTaGTCCACAAACTCTGGGTTCTGCTGCTGCATCTGCTGTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WLALGVRLRTTWLRI*STNSGFCCCICCAN Trigger: GTTTGCACAGCAGATGCAGCAGCAGAACCCAGAGTTTGTGGAGCAGATCCGGAGCCAGGTGGTGCGCAGCCGGACACCCAGTGCCAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS GCA 90 bp | AGGGTGGTGTCCTGTCAGGGGCCCGCGGGTCCTGTGGCATCTCCTTaGTGGAAGTGGCTGCTTCAAATATCTCTGGCAGGGTCTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RVVSCQGPAGPVASP*WKWLLQISLAGSGG Trigger: TCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGGAGATGCCACAGGACCCGCGGGCCCCTGACAGGACACCACCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS CCA 90 bp | AGGTCACTGTCCTCCAGCGTCACCCCGAAGGCTGTCTCCAGACACTaGATGGCAACCTCTAGGCTCTCCTGGGCGTCACACGAGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSLSSSVTPKAVSRH*MATSRLSWASHESP Trigger: TGGGCTCTCGTGTGACGCCCAGGAGAGCCTAGAGGTTGCCATCCAGTGTCTGGAGACAGCCTTCGGGGTGACGCTGGAGGACAGTGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 ENSMUST00000220317.2 |
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| CDS GCA 90 bp | AGGGGCCCGCGGGTCCTGTGGCATCTCCTGCTTGCTGGAAGTGGCTaGTTCAAATATCTCTGGCAGGGTCTGGGGGAGAGCAAGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RGPRVLWHLLLAGSG*FKYLWQGLGESKVT Trigger: AGTGACCTTGCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGCAGGAGATGCCACAGGACCCGCGGGCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000220317.2 |
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| CDS GCA 90 bp | GTCAGGGGCCCGCGGGTCCTGTGGCATCTCCTTGCTGGAAGTGGCTaGTTCAAATATCTCTGGCAGGGTCTGGGGGAGAGCAAGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: VRGPRVLWHLLAGSG*FKYLWQGLGESKVT Trigger: AGTGACCTTGCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGGAGATGCCACAGGACCCGCGGGCCCCTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS CCA 90 bp | TGTCAGGGGCCCGCGGGTCCTGTGGCATCTCCTGCTTGCTGGAAGTaGCTGCTTCAAATATCTCTGGCAGGGTCTGGGGGAGAGCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CQGPAGPVASPACWK*LLQISLAGSGGEQG Trigger: ACCTTGCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGCAGGAGATGCCACAGGACCCGCGGGCCCCTGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000220317.2 |
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| CDS CCA 90 bp | TCCTGTCAGGGGCCCGCGGGTCCTGTGGCATCTCCTTGCTGGAAGTaGCTGCTTCAAATATCTCTGGCAGGGTCTGGGGGAGAGCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SCQGPAGPVASPCWK*LLQISLAGSGGEQG Trigger: ACCTTGCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGGAGATGCCACAGGACCCGCGGGCCCCTGACAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS TCA 90 bp | CTTCATCTGCTCATTACCTTCCGTTTTGAGGCGCTCTGCCTCAGCTaGGTCCTCTTCAGAGGGTGGTGTCCTGTCAGGGGCCCGCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHLLITFRFEALCLS*VLFRGWCPVRGPRV Trigger: GACCCGCGGGCCCCTGACAGGACACCACCCTCTGAAGAGGACTCAGCTGAGGCAGAGCGCCTCAAAACGGAAGGTAATGAGCAGATGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 ENSMUST00000220317.2 |
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| CDS GCA 90 bp | CCACAGCCTCTGCATGCTTGTTCAGGCTGGATAGTGCAAGGCCCATaGGGCCATAGGCCTTGCTATACCCAGGGTCGATGCCAATGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PQPLHACSGWIVQGP*GHRPCYTQGRCQWR Trigger: GCGCCATTGGCATCGACCCTGGGTATAGCAAGGCCTATGGCCGCATGGGCCTTGCACTATCCAGCCTGAACAAGCATGCAGAGGCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS CCA 90 bp | TCCTGCTTGCTGGAAGTGGCTGCTTCAAATATCTCTGGCAGGGTCTaGGGGAGAGCAAGGTCACTGTCCTCCAGCGTCACCCCGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCLLEVAASNISGRV*GRARSLSSSVTPKA Trigger: AGCCTTCGGGGTGACGCTGGAGGACAGTGACCTTGCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000220317.2 |
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| CDS CCA 90 bp | CTGTGGCATCTCCTGCTTGCTGGAAGTGGCTGCTTCAAATATCTCTaGCAGGGTCTGGGGGAGAGCAAGGTCACTGTCCTCCAGCGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LWHLLLAGSGCFKYL*QGLGESKVTVLQRH Trigger: GTGACGCTGGAGGACAGTGACCTTGCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGCAGGAGATGCCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000220317.2 |
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| CDS CCA 90 bp | ATCTCCTTGCTGGAAGTGGCTGCTTCAAATATCTCTGGCAGGGTCTaGGGGAGAGCAAGGTCACTGTCCTCCAGCGTCACCCCGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISLLEVAASNISGRV*GRARSLSSSVTPKA Trigger: AGCCTTCGGGGTGACGCTGGAGGACAGTGACCTTGCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS CCA 90 bp | GTCCTGTGGCATCTCCTTGCTGGAAGTGGCTGCTTCAAATATCTCTaGCAGGGTCTGGGGGAGAGCAAGGTCACTGTCCTCCAGCGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLWHLLAGSGCFKYL*QGLGESKVTVLQRH Trigger: GTGACGCTGGAGGACAGTGACCTTGCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGGAGATGCCACAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS CCA 90 bp | GGGCCTTCTTGTAGTATGCCACAGCCTCTGCATGCTTGTTCAGGCTaGATAGTGCAAGGCCCATGCGGCCATAGGCCTTGCTATACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPSCSMPQPLHACSG*IVQGPCGHRPCYTQ Trigger: CTGGGTATAGCAAGGCCTATGGCCGCATGGGCCTTGCACTATCCAGCCTGAACAAGCATGCAGAGGCTGTGGCATACTACAAGAAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS-3UTR CAA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCTGTGGCATCTCCTGCTaGCTGGAAGTGGCTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLSLFSRHSVPKVALLPCGISC*LEVAAS Trigger: TGAAGCAGCCACTTCCAGCAAGCAGGAGATGCCACA...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005067.6 |
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| CDS-3UTR CAA 90 bp | TCATCACTGTCTTTATTCTCCAGGCACTCTGTGCCCAAGGTGGCGCTGCTGCCCGTGATGAAGTGTGGGTaGTTCAGCAGGCCAGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSLSLFSRHSVPKVALLPVMKCG*FSRPAM Trigger: CATCGCTGGCCTGCTGAACAACCCACACTTCATCAC...GGGCAGCAGCGCCACCTTGGGCACAGAGTGCCTGGAGAATAAAGACAGTGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR CAA 90 bp | CTGGGGCTGGCAGTGGGGATGAGAGTCAGCTACTCAAGTCCCTTTAGGAGGAACACAGCCTCTGCATGCTaGTTCAGGCTGGATAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGLAVGMRVSYSSPFRRNTASAC*FRLDSA Trigger: TGCACTATCCAGCCTGAACAAGCATGCAGAGGCTGT...GTTCCTCCTAAAGGGACTTGAGTAGCTGACTCTCATCCCCACTGCCAGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR CAA 90 bp | AAAGATGGAGGGGAAGCTGGAAAGAGACACGGATGGTCCACACGCTGGGCAGAATCATTACCTTCCGTTTaGAGGCGCTCTGCCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KDGGEAGKRHGWSTRWAESLPSV*RRSASA Trigger: AGCTGAGGCAGAGCGCCTCAAAACGGAAGGTAATGA...TTCTGCCCAGCGTGTGGACCATCCGTGTCTCTTTCCAGCTTCCCCTCCATCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CAA 90 bp | ATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATGGTGCTGGACTTGTATGTGTCGTaGTCAGGGTCCAGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MTQMGQCLCLLPRLRMVLDLYVS*SGSSSR Trigger: CCTGGAGCTGGACCCTGACAACGACACATACAAGTC...CAGCACCATCCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CAA 90 bp | GATGGTCCACACGCTGGGCAGAAGTCACAGGCCTCAGTCCTATGTGGCACAGGCTCTGCAATCTTGAGGTaGGACTTGTATGTGTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGPHAGQKSQASVLCGTGSAILR*DLYVSL Trigger: CAACGACACATACAAGTCCAACCTCAAGATTGCAGA...GCCTGTGCCACATAGGACTGAGGCCTGTGACTTCTGCCCAGCGTGTGGACCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CAA 90 bp | GATGGTCCACACGCTGGGCAGAAGTCACAGGCCTCAGTCCTATGTGGCACAGGCTTCAGCTCTGCAATCTaGAGGTTGGACTTGTATGTG | + |
|
Preference number: 5 (lower is better) Translates to: DGPHAGQKSQASVLCGTGFSSAI*RLDLYV Trigger: CACATACAAGTCCAACCTCAAGATTGCAGAGCTGAA...GCCTGTGCCACATAGGACTGAGGCCTGTGACTTCTGCCCAGCGTGTGGACCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
||
| CDS-3UTR CAA 90 bp | ATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATGGTGCTGTCCTGTGGCATCTCCTaGCTGGAAGTGGCTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MTQMGQCLCLLPRLRMVLSCGIS*LEVAAS Trigger: TGAAGCAGCCACTTCCAGCAAGGAGATGCCACAGGA...CAGCACCATCCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218208.2 |
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| CDS-3UTR CAA 90 bp | ATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATGGTGCTGACAGCCTCTGCATGCTaGTTCAGGCTGGATAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: MTQMGQCLCLLPRLRMVLTASAC*FRLDSA Trigger: TGCACTATCCAGCCTGAACAAGCATGCAGAGGCTGT...CAGCACCATCCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR CAA 90 bp | CTACTGGCTACCTACCACACACACAGCTCTGACACTATCTGCCAAAGCCTGATGGACTTGTATGTGTCGTaGTCAGGGTCCAGCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLATYHTHSSDTICQSLMDLYVS*SGSSSR Trigger: CCTGGAGCTGGACCCTGACAACGACACATACAAGTC...CATCAGGCTTTGGCAGATAGTGTCAGAGCTGTGTGTGTGGTAGGTAGCCAGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR CAA 90 bp | CTACTGGCTACCTACCACACACACAGCTCTGACACTATCTGCCAAAGCCTGATGGTGATGAAGTGTGGGTaGTTCAGCAGGCCAGCGATG | + |
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Preference number: 5 (lower is better) Translates to: LLATYHTHSSDTICQSLMVMKCG*FSRPAM Trigger: CATCGCTGGCCTGCTGAACAACCCACACTTCATCAC...CATCAGGCTTTGGCAGATAGTGTCAGAGCTGTGTGTGTGGTAGGTAGCCAGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR CAA 90 bp | AAGGATAGGATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGTCATTACCTTCCGTTTaGAGGCGCTCTGCCTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: KDRMTQMGQCLCLLPRLRSLPSV*RRSASA Trigger: AGCTGAGGCAGAGCGCCTCAAAACGGAAGGTAATGA...CCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCATCCTATCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR CAA 90 bp | AAGGATAGGATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATCTTGAGGTTGGACTaGTATGTGTCGTTGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: KDRMTQMGQCLCLLPRLRILRLD*YVSLSG Trigger: CCCTGACAACGACACATACAAGTCCAACCTCAAGAT...CCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCATCCTATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR CAA 90 bp | ATGACACAGATGGGTCAATGTCTATGTCTGCTGCCCAGGCTGAGGATGGTGCTGTCTGCAATCTTGAGGTaGGACTTGTATGTGTCGTTG | + |
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Preference number: 5 (lower is better) Translates to: MTQMGQCLCLLPRLRMVLSAILR*DLYVSL Trigger: CAACGACACATACAAGTCCAACCTCAAGATTGCAGA...CAGCACCATCCTCAGCCTGGGCAGCAGACATAGACATTGACCCATCTGTGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS-3UTR CAA 90 bp | CCCTGCCAACCCCAGACATTGAATTCCCATGAGATCAAGGATAGGATGACACAGTTCAGCTCTGCAATCTaGAGGTTGGACTTGTATGTG | + |
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Preference number: 5 (lower is better) Translates to: PCQPQTLNSHEIKDRMTQFSSAI*RLDLYV Trigger: CACATACAAGTCCAACCTCAAGATTGCAGAGCTGAA...CTGTGTCATCCTATCCTTGATCTCATGGGAATTCAATGTCTGGGGTTGGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS GCA 72 bp | CCATGCGGCCATAGGCCTTGCTATACCCAGGGTCGATaGCAATGGCGCGCTCGCAGTCCTGCACGGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: PCGHRPCYTQGR*QWRARSPARPP Trigger: TGGGGGCCGTGCAGGACTGCGAGCGCGCCATTGGCATCGACCCTGGGTATAGCAAGGCCTATGGCCGCATGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 ENSMUST00000220317.2 |
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| CDS GCA 72 bp | TGTTGGCCCGCCTGGATGAGGCTGGCCAGGTCACTCTaGTGCGGACTGCTGCCTGGCGTGCCCAGAGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: CWPAWMRLARSL*CGLLPGVPRGL Trigger: TAACCCTCTGGGCACGCCAGGCAGCAGTCCGCAGCAGAGTGACCTGGCCAGCCTCATCCAGGCGGGCCAACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS CCA 72 bp | GGCCATAGGCCTTGCTATACCCAGGGTCGATGCCAATaGCGCGCTCGCAGTCCTGCACGGCCCCCACGTAGT | + |
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Preference number: 6 (lower is better) Translates to: GHRPCYTQGRCQ*RARSPARPPRS Trigger: ACTACGTGGGGGCCGTGCAGGACTGCGAGCGCGCCATTGGCATCGACCCTGGGTATAGCAAGGCCTATGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 ENSMUST00000220317.2 |
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| CDS CCA 72 bp | GAGGCTGGCCAGGTCACTCTGCTGCGGACTGCTGCCTaGCGTGCCCAGAGGGTTATGGCCTCCGGAGATCAT | + |
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Preference number: 6 (lower is better) Translates to: EAGQVTLLRTAA*RAQRVMASGDH Trigger: ATGATCTCCGGAGGCCATAACCCTCTGGGCACGCCAGGCAGCAGTCCGCAGCAGAGTGACCTGGCCAGCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS GCA 72 bp | CTGGGTGTCCGGCTGCGCACCACCTGGCTCCGGATCTaGTCCACAAACTCTGGGTTCTGCTGCTGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: LGVRLRTTWLRI*STNSGFCCCIC Trigger: GCAGATGCAGCAGCAGAACCCAGAGTTTGTGGAGCAGATCCGGAGCCAGGTGGTGCGCAGCCGGACACCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS CAA 90 bp | GGTGGTGTCCTGTCAGGGGCCCGCGGGTCCTGTGGCATCTCCTGCTaGCTGGAAGTGGCTGCTTCAAATATCTCTGGCAGGGTCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GGVLSGARGSCGISC*LEVAASNISGRVWG Trigger: CCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGCAGGAGATGCCACAGGACCCGCGGGCCCCTGACAGGACACCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000220317.2 |
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| CDS CAA 90 bp | GAGGGTGGTGTCCTGTCAGGGGCCCGCGGGTCCTGTGGCATCTCCTaGCTGGAAGTGGCTGCTTCAAATATCTCTGGCAGGGTCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: EGGVLSGARGSCGIS*LEVAASNISGRVWG Trigger: CCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGGAGATGCCACAGGACCCGCGGGCCCCTGACAGGACACCACCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS CCA 72 bp | TCCTCCAGCGTCACCCCGAAGGCTGTCTCCAGACACTaGATGGCAACCTCTAGGCTCTCCTGGGCGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: SSSVTPKAVSRH*MATSRLSWASH Trigger: GTGTGACGCCCAGGAGAGCCTAGAGGTTGCCATCCAGTGTCTGGAGACAGCCTTCGGGGTGACGCTGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 ENSMUST00000220317.2 |
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| CDS GCA 72 bp | GTCCTGTCAGGGGCCCGCGGGTCCTGTGGCATCTCCTaGTTGCTGGAAGTGGCTGCTTCAAATATCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VLSGARGSCGIS*LLEVAASNISG Trigger: GCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGCAGGAGATGCCACAGGACCCGCGGGCCCCTGACAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000220317.2 |
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| CDS GCA 72 bp | CCGCGGGTCCTGTGGCATCTCCTTGCTGGAAGTGGCTaGTTCAAATATCTCTGGCAGGGTCTGGGGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PRVLWHLLAGSG*FKYLWQGLGES Trigger: GCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGGAGATGCCACAGGACCCGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS CCA 72 bp | CCCGCGGGTCCTGTGGCATCTCCTGCTTGCTGGAAGTaGCTGCTTCAAATATCTCTGGCAGGGTCTGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: PAGPVASPACWK*LLQISLAGSGG Trigger: TCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGCAGGAGATGCCACAGGACCCGCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000220317.2 |
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| CDS CAA 72 bp | CTGTCAGGGGCCCGCGGGTCCTGTGGCATCTCCTGCTaGCTGGAAGTGGCTGCTTCAAATATCTCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSGARGSCGISC*LEVAASNISGR Trigger: CCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGCAGGAGATGCCACAGGACCCGCGGGCCCCTGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000220317.2 |
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| CDS GCA 72 bp | CTCCACAAACTCTGGGTTCTGCTGCTGCATCTGCTGTaGAAACTGTTGGCCCGCCTGGATGAGGCTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LHKLWVLLLHLL*KLLARLDEAGQ Trigger: CTGGCCAGCCTCATCCAGGCGGGCCAACAGTTTGCACAGCAGATGCAGCAGCAGAACCCAGAGTTTGTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS CAA 90 bp | CCGCCCGTAGGGCTTGGCGCCTCCCGTAACTTCAGCTCTGCAATCTaGAGGTTGGACTTGTATGTGTCGTTGTCAGGGTCCAGCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PPVGLGASRNFSSAI*RLDLYVSLSGSSSR Trigger: CCTGGAGCTGGACCCTGACAACGACACATACAAGTCCAACCTCAAGATTGCAGAGCTGAAGTTACGGGAGGCGCCAAGCCCTACGGGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS CAA 90 bp | TGGGGGCTGTTCATTAAGCTCGAAGCCATGGTGATGAAGTGTGGGTaGTTCAGCAGGCCAGCGATGTCTAAGCTGCCCACGCCGCCCGTA | + |
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Preference number: 6 (lower is better) Translates to: WGLFIKLEAMVMKCG*FSRPAMSKLPTPPV Trigger: TACGGGCGGCGTGGGCAGCTTAGACATCGCTGGCCTGCTGAACAACCCACACTTCATCACCATGGCTTCGAGCTTAATGAACAGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS TCA 72 bp | CTCATTACCTTCCGTTTTGAGGCGCTCTGCCTCAGCTaGGTCCTCTTCAGAGGGTGGTGTCCTGTCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LITFRFEALCLS*VLFRGWCPVRG Trigger: GCCCCTGACAGGACACCACCCTCTGAAGAGGACTCAGCTGAGGCAGAGCGCCTCAAAACGGAAGGTAATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 ENSMUST00000220317.2 |
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| CDS GCA 72 bp | CTGCATGCTTGTTCAGGCTGGATAGTGCAAGGCCCATaGGGCCATAGGCCTTGCTATACCCAGGGTCGATGC | + |
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Preference number: 6 (lower is better) Translates to: LHACSGWIVQGP*GHRPCYTQGRC Trigger: GCATCGACCCTGGGTATAGCAAGGCCTATGGCCGCATGGGCCTTGCACTATCCAGCCTGAACAAGCATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS GCA 72 bp | CTCCGGATCTGCTCCACAAACTCTGGGTTCTGCTGCTaGATCTGCTGTGCAAACTGTTGGCCCGCCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: LRICSTNSGFCC*ICCANCWPAWM Trigger: CATCCAGGCGGGCCAACAGTTTGCACAGCAGATGCAGCAGCAGAACCCAGAGTTTGTGGAGCAGATCCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS CAA 90 bp | GTAGGGCTTGGCGCCTCCCGTAACTTCAGCTCTGCAATCTTGAGGTaGGACTTGTATGTGTCGTTGTCAGGGTCCAGCTCCAGGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VGLGASRNFSSAILR*DLYVSLSGSSSRAF Trigger: GAAGGCCCTGGAGCTGGACCCTGACAACGACACATACAAGTCCAACCTCAAGATTGCAGAGCTGAAGTTACGGGAGGCGCCAAGCCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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| CDS CCA 72 bp | CTCCTGCTTGCTGGAAGTGGCTGCTTCAAATATCTCTaGCAGGGTCTGGGGGAGAGCAAGGTCACTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LLLAGSGCFKYL*QGLGESKVTVL Trigger: GAGGACAGTGACCTTGCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGCAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000220317.2 |
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| CDS TCA 72 bp | CAGCTCTGTTACAGAAGTAGACAGCATTGGCAGGGTTaGGCTCAATGGCCTTGCCGTAGAGGTGCACAGCCG | + |
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Preference number: 6 (lower is better) Translates to: QLCYRSRQHWQG*AQWPCRRGAQP Trigger: CGGCTGTGCACCTCTACGGCAAGGCCATTGAGCTCAACCCTGCCAATGCTGTCTACTTCTGTAACAGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 ENSMUST00000220317.2 |
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| CDS GCA 72 bp | AGGTGCACAGCCGCCTCGAAGTTCTCCAGCTTCATCTaGTCATTACCTTCCGTTTTGAGGCGCTCTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: RCTAASKFSSFI*SLPSVLRRSAS Trigger: TGAGGCAGAGCGCCTCAAAACGGAAGGTAATGAGCAGATGAAGCTGGAGAACTTCGAGGCGGCTGTGCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 ENSMUST00000220317.2 |
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| CDS CCA 72 bp | CATCTCCTTGCTGGAAGTGGCTGCTTCAAATATCTCTaGCAGGGTCTGGGGGAGAGCAAGGTCACTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HLLAGSGCFKYL*QGLGESKVTVL Trigger: GAGGACAGTGACCTTGCTCTCCCCCAGACCCTGCCAGAGATATTTGAAGCAGCCACTTCCAGCAAGGAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS CAA 72 bp | GGCGCCTCCCGTAACTTCAGCTCTGCAATCTTGAGGTaGGACTTGTATGTGTCGTTGTCAGGGTCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GASRNFSSAILR*DLYVSLSGSSS Trigger: GGAGCTGGACCCTGACAACGACACATACAAGTCCAACCTCAAGATTGCAGAGCTGAAGTTACGGGAGGCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS CAA 72 bp | GGGCTTGGCGCCTCCCGTAACTTCAGCTCTGCAATCTaGAGGTTGGACTTGTATGTGTCGTTGTCAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLGASRNFSSAI*RLDLYVSLSGS Trigger: GGACCCTGACAACGACACATACAAGTCCAACCTCAAGATTGCAGAGCTGAAGTTACGGGAGGCGCCAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS TCA 72 bp | GGCTTGGCGCCTCCCGTAACTTCAGCTCTGCAATCTTaGGGTTGGACTTGTATGTGTCGTTGTCAGGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLAPPVTSALQS*GWTCMCRCQGP Trigger: TGGACCCTGACAACGACACATACAAGTCCAACCTCAAGATTGCAGAGCTGAAGTTACGGGAGGCGCCAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS CAA 72 bp | TCCCGTAACTTCAGCTCTGCAATCTTGAGGTTGGACTaGTATGTGTCGTTGTCAGGGTCCAGCTCCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRNFSSAILRLD*YVSLSGSSSRA Trigger: GGCCCTGGAGCTGGACCCTGACAACGACACATACAAGTCCAACCTCAAGATTGCAGAGCTGAAGTTACGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 ENSMUST00000219401.2 |
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| CDS CAA 72 bp | TTCATTAAGCTCGAAGCCATGGTGATGAAGTGTGGGTaGTTCAGCAGGCCAGCGATGTCTAAGCTGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: FIKLEAMVMKCG*FSRPAMSKLPT Trigger: CGTGGGCAGCTTAGACATCGCTGGCCTGCTGAACAACCCACACTTCATCACCATGGCTTCGAGCTTAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005067.6 ENSMUST00000218208.2 |
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