Pregenerated sensors for SGSM3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042303

Ensembl transcript IDs: ENSMUST00000124845.9, ENSMUST00000137004.2, ENSMUST00000137255.3, ENSMUST00000139517.9, ENSMUST00000143147.8, ENSMUST00000154904.3, ENSMUST00000228971.2, ENSMUST00000229727.2

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	AGAGTGTCTTTCCCTGAACCTCCTAGCCTGAGGGAGGCTCGAGGCTaGCCAGGGCTCTGCCTTCTGTTGAAGGGAGCCTTCCAGGCAGTC	+
Preference number: 1 (lower is better) Translates to: RVSFPEPPSLREARG*PGLCLLLKGAFQAV Trigger: GACTGCCTGGAAGGCTCCCTTCAACAGAAGGCAGAGCCCTGGCCAGCCTCGAGCCTCCCTCAGGCTAGGAGGTTCAGGGAAAGACACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
3UTR CAA 90 bp	CCTAGCCTGAGGGAGGCTCGAGGCTGGCCAGGGCTCTGCCTTCTGTaGAAGGGAGCCTTCCAGGCAGTCTATGATGGGCGGGCCTGGCAG	+
Preference number: 2 (lower is better) Translates to: PSLREARGWPGLCLL*KGAFQAVYDGRAWQ Trigger: CTGCCAGGCCCGCCCATCATAGACTGCCTGGAAGGCTCCCTTCAACAGAAGGCAGAGCCCTGGCCAGCCTCGAGCCTCCCTCAGGCTAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
3UTR-3UTR TCA 90 bp	GACGTACTTGAAATAAACACTGAGCAAGGGCCTGGGAGTCAGACCATTTCAGGAGGCTCTGCCTTCTGTTaGAGGGAGCCTTCCAGGCAG	+
Preference number: 2 (lower is better) Translates to: DVLEINTEQGPGSQTISGGSAFC*REPSRQ Trigger: CTGCCTGGAAGGCTCCCTTCAACAGAAGGCAGAGCC...TCCTGAAATGGTCTGACTCCCAGGCCCTTGCTCAGTGTTTATTTCAAGTACGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
3UTR-3UTR TCA 90 bp	CTAATTGCATCAGACGTACTTGAAATAAACACTGAGCAAGGGCCTGGGAGTCAGGGGAGGCCCAGACACTaGTCATGGGTCCTGAGTAAG	+
Preference number: 2 (lower is better) Translates to: LIASDVLEINTEQGPGSQGRPRH*SWVLSK Trigger: CTTACTCAGGACCCATGATCAGTGTCTGGGCCTCCC...CTGACTCCCAGGCCCTTGCTCAGTGTTTATTTCAAGTACGTCTGATGCAATTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
3UTR-3UTR GCA 90 bp	CAGAACCTTCCTTGTCCACACGGAAACCAAACTCATCATAGCAGAGCTCTGGCTGAGGATTCTTCTTTCTaGAAAGGTAAATCTCTTCAT	+
Preference number: 2 (lower is better) Translates to: QNLPCPHGNQTHHSRALAEDSSF*KGKSLH Trigger: ATGAAGAGATTTACCTTTGCAGAAAGAAGAATCCTC...AGCCAGAGCTCTGCTATGATGAGTTTGGTTTCCGTGTGGACAAGGAAGGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143147.8
3UTR-3UTR CCA 90 bp	TGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATGTTAAGGAAAGCAGCTaGGCTGGCCACCACTGTATG	+
Preference number: 2 (lower is better) Translates to: WLNKRWEACSSKRFIYNNVKESS*AGHHCM Trigger: CATACAGTGGTGGCCAGCCCAGCTGCTTTCCTTAAC...ATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
3UTR TCA 72 bp	GGGAGGCTCGAGGCTGGCCAGGGCTCTGCCTTCTGTTaGAGGGAGCCTTCCAGGCAGTCTATGATGGGCGGG	+
Preference number: 3 (lower is better) Translates to: GRLEAGQGSAFC*REPSRQSMMGG Trigger: CCCGCCCATCATAGACTGCCTGGAAGGCTCCCTTCAACAGAAGGCAGAGCCCTGGCCAGCCTCGAGCCTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
3UTR TCA 72 bp	AGCTCTGGAGAGTGTCTTTCCCTGAACCTCCTAGCCTaGGGGAGGCTCGAGGCTGGCCAGGGCTCTGCCTTC	+
Preference number: 3 (lower is better) Translates to: SSGECLSLNLLA*GRLEAGQGSAF Trigger: GAAGGCAGAGCCCTGGCCAGCCTCGAGCCTCCCTCAGGCTAGGAGGTTCAGGGAAAGACACTCTCCAGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
3UTR TCA 72 bp	CTGCCTTCTGTTGAAGGGAGCCTTCCAGGCAGTCTATaGTGGGCGGGCCTGGCAGCCACAGAGCAGCTGGAA	+
Preference number: 3 (lower is better) Translates to: LPSVEGSLPGSL*WAGLAATEQLE Trigger: TTCCAGCTGCTCTGTGGCTGCCAGGCCCGCCCATCATAGACTGCCTGGAAGGCTCCCTTCAACAGAAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
3UTR CCA 72 bp	GCTGGCACTCCTCAGGACCATGTTAAGGAAAGCAGCTaGGCTGGCCACCACTGTATGCTTTTGACAGCCGTG	+
Preference number: 3 (lower is better) Translates to: AGTPQDHVKESS*AGHHCMLLTAV Trigger: CACGGCTGTCAAAAGCATACAGTGGTGGCCAGCCCAGCTGCTTTCCTTAACATGGTCCTGAGGAGTGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
3UTR TCA 72 bp	CTGAACTGGGGAGGCCCAGACACTGATCATGGGTCCTaGGTAAGCTCTGGAGAGTGTCTTTCCCTGAACCTC	+
Preference number: 3 (lower is better) Translates to: LNWGGPDTDHGS*VSSGECLSLNL Trigger: GAGGTTCAGGGAAAGACACTCTCCAGAGCTTACTCAGGACCCATGATCAGTGTCTGGGCCTCCCCAGTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
3UTR GCA 72 bp	GAACTCAGGGCTTGGCTCAACAAAAGATGGGAGGCTTaGTCTAGTAAAAGGTTTATTTACAATAATGTCCCC	+
Preference number: 3 (lower is better) Translates to: ELRAWLNKRWEA*SSKRFIYNNVP Trigger: GGGGACATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCAAGCCCTGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGCCCGGTAGGCCAGGTGCTTaGGACGCTGGGTCTCCACGG	+
Preference number: 4 (lower is better) Translates to: GWGPGSIPCWHLEATQWPGRPGA*DAGSPR Trigger: CCGTGGAGACCCAGCGTCGCAAGCACCTGGCCTACC...GGGCCACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	GAGGCTCGAGGCTGGCCAGGGCTCTGCCTTCTGTTGAAGGGAGCCTTCCAGGCACCACAGTGGGCAGGCTaGAGCAGAGAACCTCCAGCC	+
Preference number: 4 (lower is better) Translates to: EARGWPGLCLLLKGAFQAPQWAG*SREPPA Trigger: GGCTGGAGGTTCTCTGCTCCAGCCTGCCCACTGTGG...TGCCTGGAAGGCTCCCTTCAACAGAAGGCAGAGCCCTGGCCAGCCTCGAGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	TCCAGGCAGTCTATGATGGGCGGGCCTGGCAGCCACAGAGCAGCTGGAAGGAGCAGGTGCTTGCGACGCTaGGTCTCCACGGCCACATCA	+
Preference number: 4 (lower is better) Translates to: SRQSMMGGPGSHRAAGRSRCLRR*VSTATS Trigger: TGATGTGGCCGTGGAGACCCAGCGTCGCAAGCACCT...GCTCCTTCCAGCTGCTCTGTGGCTGCCAGGCCCGCCCATCATAGACTGCCTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGCCCGCGGGGGAGGGAGACTaGAATCTTGTCCCAGGTGAG	+
Preference number: 4 (lower is better) Translates to: GWGPGSIPCWHLEATQWPAGEGD*NLVPGE Trigger: CTCACCTGGGACAAGATTGCAGTCTCCCTCCCCCGC...GGGCCACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GAGGCTCGAGGCTGGCCAGGGCTCTGCCTTCTGTTGAAGGGAGCCTTCCAGGCAGAGTTCTTCTTCTTCTaGAGCGCCCCAGAGAGCCGC	+
Preference number: 4 (lower is better) Translates to: EARGWPGLCLLLKGAFQAEFFFF*SAPESR Trigger: GCGGCTCTCTGGGGCGCTGCAGAAGAAGAAGAACTC...TGCCTGGAAGGCTCCCTTCAACAGAAGGCAGAGCCCTGGCCAGCCTCGAGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	TCCAGGCAGTCTATGATGGGCGGGCCTGGCAGCCACAGAGCAGCTGGAAGGAGCAAGCGAGGCAGGTACTaGACAATCAGGTGGCGCAGG	+
Preference number: 4 (lower is better) Translates to: SRQSMMGGPGSHRAAGRSKRGRY*TIRWRR Trigger: CCTGCGCCACCTGATTGTCCAGTACCTGCCTCGCTT...GCTCCTTCCAGCTGCTCTGTGGCTGCCAGGCCCGCCCATCATAGACTGCCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	CCTCCTAGCCTGAGGGAGGCTCGAGGCTGGCCAGGGCTCTGCCTTCTGTTGAAGATGCCCAGCGTAGTCTaGAACAACACCAGGGAGCCC	+
Preference number: 4 (lower is better) Translates to: PPSLREARGWPGLCLLLKMPSVV*NNTREP Trigger: GGGCTCCCTGGTGTTGTTCCAGACTACGCTGGGCAT...CTTCAACAGAAGGCAGAGCCCTGGCCAGCCTCGAGCCTCCCTCAGGCTAGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	TCCAGGCAGTCTATGATGGGCGGGCCTGGCAGCCACAGAGCAGCTGGAAGGAGCAGCTCACACTTGATCTaGACCCAGCCAGGGCTTCGC	+
Preference number: 4 (lower is better) Translates to: SRQSMMGGPGSHRAAGRSSSHLI*TQPGLR Trigger: GCGAAGCCCTGGCTGGGTCCAGATCAAGTGTGAGCT...GCTCCTTCCAGCTGCTCTGTGGCTGCCAGGCCCGCCCATCATAGACTGCCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	TCCAGGCAGTCTATGATGGGCGGGCCTGGCAGCCACAGAGCAGCTGGAAGGAGCTCATGCCATGTGGGATaGCAGCCAGCACTAGGGAAC	+
Preference number: 4 (lower is better) Translates to: SRQSMMGGPGSHRAAGRSSCHVG*QPALGN Trigger: GTTCCCTAGTGCTGGCTGGCATCCCACATGGCATGA...GCTCCTTCCAGCTGCTCTGTGGCTGCCAGGCCCGCCCATCATAGACTGCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	TGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGCCAGCAGCAGTCTGATGTaGACCACGCTGGCGAAGGCC	+
Preference number: 4 (lower is better) Translates to: WLGSWVYSMLASRGHTVASSSLM*TTLAKA Trigger: GGCCTTCGCCAGCGTGGTGCACATCAGACTGCTGCT...GGCCACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	TGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGCCTTGGGGTCTGTGCACTaGAAGTGGCGTGCCACACGC	+
Preference number: 4 (lower is better) Translates to: WLGSWVYSMLASRGHTVALGSVH*KWRATR Trigger: GCGTGTGGCACGCCACTTCCAGTGCACAGACCCCAA...GGCCACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	GCAAGGGCCTGGGAGTCAGACCATTTCAGGAGGGGTAGCTTTTGTGGAACTCAGTTGGCCCGGCGCCGGTaGCTGCGTAAGCATGCCACG	+
Preference number: 4 (lower is better) Translates to: ARAWESDHFRRGSFCGTQLARRR*LRKHAT Trigger: CGTGGCATGCTTACGCAGCCACCGGCGCCGGGCCAA...CTGAGTTCCACAAAAGCTACCCCTCCTGAAATGGTCTGACTCCCAGGCCCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGTAGAGCCAGGCCAGTaGTCGGAGGACTCTGCGCAG	+
Preference number: 4 (lower is better) Translates to: VWLGSWVYSMLASRGHTVVEPGQ*SEDSAQ Trigger: CTGCGCAGAGTCCTCCGAGCACTGGCCTGGCTCTAC...CACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GCAAGGGCCTGGGAGTCAGACCATTTCAGGAGGGGTAGCTTTTGTGGAACTCAGCCCGGCGCCGGTGGCTaGGTAAGCATGCCACGTAGT	+
Preference number: 4 (lower is better) Translates to: ARAWESDHFRRGSFCGTQPGAGG*VSMPRS Trigger: ACTACGTGGCATGCTTACGCAGCCACCGGCGCCGGG...CTGAGTTCCACAAAAGCTACCCCTCCTGAAATGGTCTGACTCCCAGGCCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	GAAGTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACATGGCGCAGGACCCGCTaGTCAGTCTGGACTCCCAGC	+
Preference number: 4 (lower is better) Translates to: EVWLGSWVYSMLASRGHTWRRTR*SVWTPS Trigger: GCTGGGAGTCCAGACTGACCAGCGGGTCCTGCGCCA...TGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	TCCAGGCAGTCTATGATGGGCGGGCCTGGCAGCCACAGAGCAGCTGGAAGGAGCGGACCTCCACAAACTTaGCTGGAAACCAGCCTCTCA	+
Preference number: 4 (lower is better) Translates to: SRQSMMGGPGSHRAAGRSGPPQT*LETSLS Trigger: TGAGAGGCTGGTTTCCAGCCAAGTTTGTGGAGGTCC...GCTCCTTCCAGCTGCTCTGTGGCTGCCAGGCCCGCCCATCATAGACTGCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	CCTCCTAGCCTGAGGGAGGCTCGAGGCTGGCCAGGGCTCTGCCTTCTGTTGAAGGCGTGTGCTGCATCATaGGTCACATTCACAGACTGC	+
Preference number: 4 (lower is better) Translates to: PPSLREARGWPGLCLLLKACAAS*VTFTDC Trigger: GCAGTCTGTGAATGTGACCCATGATGCAGCACACGC...CTTCAACAGAAGGCAGAGCCCTGGCCAGCCTCGAGCCTCCCTCAGGCTAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	TGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGCCGCACTGGAAGTGGCGTaGCACACGCAAAATGGCTTC	+
Preference number: 4 (lower is better) Translates to: WLGSWVYSMLASRGHTVAALEVA*HTQNGF Trigger: GAAGCCATTTTGCGTGTGGCACGCCACTTCCAGTGC...GGCCACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	GGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGCCCTCCCAGCTGAAGAGATaGTGCTTCACCAGCATGTCC	+
Preference number: 4 (lower is better) Translates to: GWGPGSIPCWHLEATQWPSQLKR*CFTSMS Trigger: GGACATGCTGGTGAAGCACCATCTCTTCAGCTGGGA...GGGCCACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GAGGCTCGAGGCTGGCCAGGGCTCTGCCTTCTGTTGAAGGGAGCCTTCCAGGCACTTGACATCCATTTGTaGGTGTGCTGCATCATGGGT	+
Preference number: 4 (lower is better) Translates to: EARGWPGLCLLLKGAFQALDIHL*VCCIMG Trigger: ACCCATGATGCAGCACACGCACAAATGGATGTCAAG...TGCCTGGAAGGCTCCCTTCAACAGAAGGCAGAGCCCTGGCCAGCCTCGAGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	CCTCCTAGCCTGAGGGAGGCTCGAGGCTGGCCAGGGCTCTGCCTTCTGTTGAAGCCTTTTCGATCTGTTTaGCAGCGATGGTCTCATCGT	+
Preference number: 4 (lower is better) Translates to: PPSLREARGWPGLCLLLKPFRSV*QRWSHR Trigger: ACGATGAGACCATCGCTGCCAAACAGATCGAAAAGG...CTTCAACAGAAGGCAGAGCCCTGGCCAGCCTCGAGCCTCCCTCAGGCTAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR TCA 90 bp	TTGAAGGGAGCCTTCCAGGCAGTCTATGATGGGCGGGCCTGGCAGCCACAGAGCTGTCTGACAGCGTGTTaGAGATGGAAGCTGAGTTCT	+
Preference number: 4 (lower is better) Translates to: LKGAFQAVYDGRAWQPQSCLTAC*RWKLSS Trigger: AGAACTCAGCTTCCATCTTCAACACGCTGTCAGACA...GCTCTGTGGCTGCCAGGCCCGCCCATCATAGACTGCCTGGAAGGCTCCCTTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GAAGTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACACAGCCACCATGCCTGTaGCCTGGCAGTAGCCAATCT	+
Preference number: 4 (lower is better) Translates to: EVWLGSWVYSMLASRGHTQPPCL*PGSSQS Trigger: AGATTGGCTACTGCCAGGGCACAGGCATGGTGGCTG...TGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	CTCCTCAGGACCATGTTAAGGAAAGCAGCTGGGCTGGCCACCACTGTATGCTTTCCCCAGCAGCAGCTCTaGGTCATCCATCTGTGCAGG	+
Preference number: 4 (lower is better) Translates to: LLRTMLRKAAGLATTVCFPQQQL*VIHLCR Trigger: CCTGCACAGATGGATGACGCAGAGCTGCTGCTGGGG...AAAGCATACAGTGGTGGCCAGCCCAGCTGCTTTCCTTAACATGGTCCTGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	TACCATATGGCTGGCACTCCTCAGGACCATGTTAAGGAAAGCAGCTGGGCTGGCGCTGGTGGCTCTCCATaGTGTAGTCTGGGGTCAGCT	+
Preference number: 4 (lower is better) Translates to: YHMAGTPQDHVKESSWAGAGGSP*CSLGSA Trigger: AGCTGACCCCAGACTACAGCATGGAGAGCCACCAGC...GCCAGCCCAGCTGCTTTCCTTAACATGGTCCTGAGGAGTGCCAGCCATATGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	TACCATATGGCTGGCACTCCTCAGGACCATGTTAAGGAAAGCAGCTGGGCTGGCTTCACCAGCATGTCCTaGACACCCTCCTTCAGGGGC	+
Preference number: 4 (lower is better) Translates to: YHMAGTPQDHVKESSWAGFTSMS*TPSFRG Trigger: GCCCCTGAAGGAGGGTGTGCAGGACATGCTGGTGAA...GCCAGCCCAGCTGCTTTCCTTAACATGGTCCTGAGGAGTGCCAGCCATATGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	TGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGCCTCTGTTTGGCAGCGATaGTCTCATCGTTGGAGCTGT	+
Preference number: 4 (lower is better) Translates to: WLGSWVYSMLASRGHTVASVWQR*SHRWSC Trigger: ACAGCTCCAACGATGAGACCATCGCTGCCAAACAGA...GGCCACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	TCCAGGCAGTCTATGATGGGCGGGCCTGGCAGCCACAGAGCAGCTGGAAGGAGCCAGTGCTCATCCTTCTaGGAAATGATCGTGATGATG	+
Preference number: 4 (lower is better) Translates to: SRQSMMGGPGSHRAAGRSQCSSF*EMIVMM Trigger: CATCATCACGATCATTTCCCAGAAGGATGAGCACTG...GCTCCTTCCAGCTGCTCTGTGGCTGCCAGGCCCGCCCATCATAGACTGCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	GTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGCTCCACAAACTTGGCTaGAAACCAGCCTCTCAGGCC	+
Preference number: 4 (lower is better) Translates to: VWLGSWVYSMLASRGHTVLHKLG*KPASQA Trigger: GGCCTGAGAGGCTGGTTTCCAGCCAAGTTTGTGGAG...CACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR TCA 90 bp	GAAGTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACACCCCACGCAGATAAGTaGGCGGAGCTTGACATCCAT	+
Preference number: 4 (lower is better) Translates to: EVWLGSWVYSMLASRGHTPHADK*AELDIH Trigger: ATGGATGTCAAGCTCCGCTCACTTATCTGCGTGGGG...TGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGCCCGCTACCAGCTCTGTTTaGTTGATGTTCTTTGCCTTG	+
Preference number: 4 (lower is better) Translates to: GWGPGSIPCWHLEATQWPATSSV*LMFFAL Trigger: CAAGGCAAAGAACATCAAGCAAACAGAGCTGGTAGC...GGGCCACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	CTCCTCAGGACCATGTTAAGGAAAGCAGCTGGGCTGGCCACCACTGTATGCTTTCAAAGCAGGCGTTGCTaGGCATGGTACGGAGCAGGT	+
Preference number: 4 (lower is better) Translates to: LLRTMLRKAAGLATTVCFQSRRC*AWYGAG Trigger: ACCTGCTCCGTACCATGCCCAGCAACGCCTGCTTTG...AAAGCATACAGTGGTGGCCAGCCCAGCTGCTTTCCTTAACATGGTCCTGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR TCA 90 bp	TCCATCAGAATTGAGAAGTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATTGGGTGAACTCCAGGTaGGCCTGCCAACGTAGCCTC	+
Preference number: 4 (lower is better) Translates to: SIRIEKFGWGPGSIPCWHWVNSR*ACQRSL Trigger: GAGGCTACGTTGGCAGGCTCACCTGGAGTTCACCCA...ATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTCTCAATTCTGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR TCA 90 bp	GGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGCCCGGATTCTTCTTTCTGTaGGTATTTTGCCAGGATCTC	+
Preference number: 4 (lower is better) Translates to: GWGPGSIPCWHLEATQWPGFFFL*VFCQDL Trigger: GAGATCCTGGCAAAATACTCACAGAAAGAAGAATCC...GGGCCACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	CTCCTCAGGACCATGTTAAGGAAAGCAGCTGGGCTGGCCACCACTGTATGCTTTCAGGGGTCAGGACTTTaGCATCTTCGTCCAGCCTGT	+
Preference number: 4 (lower is better) Translates to: LLRTMLRKAAGLATTVCFQGSGL*HLRPAC Trigger: ACAGGCTGGACGAAGATGGCAAAGTCCTGACCCCTG...AAAGCATACAGTGGTGGCCAGCCCAGCTGCTTTCCTTAACATGGTCCTGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GCAAGGGCCTGGGAGTCAGACCATTTCAGGAGGGGTAGCTTTTGTGGAACTCAGAGCCTGTCATCTGGCTaGATCCAGGCTCAGAACCTT	+
Preference number: 4 (lower is better) Translates to: ARAWESDHFRRGSFCGTQSLSSG*IQAQNL Trigger: AAGGTTCTGAGCCTGGATGCAGCCAGATGACAGGCT...CTGAGTTCCACAAAAGCTACCCCTCCTGAAATGGTCTGACTCCCAGGCCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR TCA 90 bp	CCATCAGAATTGAGAAGTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCCATCATGGTTATGGGTaGACTCCAGGTGAGCCTGCC	+
Preference number: 4 (lower is better) Translates to: PSELRSLAGVLGLFHAGIHHGYG*TPGEPA Trigger: GGCAGGCTCACCTGGAGTTCACCCATAACCATGATG...GATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTCTCAATTCTGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR TCA 90 bp	GCAAGGGCCTGGGAGTCAGACCATTTCAGGAGGGGTAGCTTTTGTGGAACTCAGCTGTGCAGGAATGTCTaGCAGCGTGTTGAAGATGGA	+
Preference number: 4 (lower is better) Translates to: ARAWESDHFRRGSFCGTQLCRNV*QRVEDG Trigger: TCCATCTTCAACACGCTGTCAGACATTCCTGCACAG...CTGAGTTCCACAAAAGCTACCCCTCCTGAAATGGTCTGACTCCCAGGCCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	CTAATTGCATCAGACGTACTTGAAATAAACACTGAGCAAGGGCCTGGGAGTCAGCCAGACTTCCTCCGCTaGGTCCTGCGCCGTACAACC	+
Preference number: 4 (lower is better) Translates to: LIASDVLEINTEQGPGSQPDFLR*VLRRTT Trigger: GGTTGTACGGCGCAGGACGCAGCGGAGGAAGTCTGG...CTGACTCCCAGGCCCTTGCTCAGTGTTTATTTCAAGTACGTCTGATGCAATTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR TCA 90 bp	ATTGAGAAGTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCCAATCTTGTCCCAGGTaGGATCCCCAACATCATGGT	+
Preference number: 4 (lower is better) Translates to: IEKFGWGPGSIPCWHLEAQSCPR*DPQHHG Trigger: ACCATGATGTTGGGGATCTCACCTGGGACAAGATTG...GGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTCTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR TCA 90 bp	GGGCTTGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACACCACGGCCACATCAGTaGGGGAGCCAGCCAGCCTCA	+
Preference number: 4 (lower is better) Translates to: GLGSTKDGRLALVKGLFTPRPHQ*GSQPAS Trigger: TGAGGCTGGCTGGCTCCCTCACTGATGTGGCCGTGG...TGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCAAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	CCATCAGAATTGAGAAGTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTTTGCCAGGATCTCCTaGGGCCATATGCTTGGAGTC	+
Preference number: 4 (lower is better) Translates to: PSELRSLAGVLGLFHAGIFARIS*GHMLGV Trigger: GACTCCAAGCATATGGCCCCAGGAGATCCTGGCAAA...GATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTCTCAATTCTGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	GGGCTTGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACACAGGGCCTTGAGGGCTaGGCAGAGGGTTCCTCGCAC	+
Preference number: 4 (lower is better) Translates to: GLGSTKDGRLALVKGLFTQGLEG*AEGSSH Trigger: GTGCGAGGAACCCTCTGCCCAGCCCTCAAGGCCCTG...TGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCAAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR TCA 90 bp	GGGCTTGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACATGCGCAGCAGCAGTCTaGTGTGCACCACGCTGGCGA	+
Preference number: 4 (lower is better) Translates to: GLGSTKDGRLALVKGLFTCAAAV*CAPRWR Trigger: TCGCCAGCGTGGTGCACATCAGACTGCTGCTGCGCA...TGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR TCA 90 bp	TACCATATGGCTGGCACTCCTCAGGACCATGTTAAGGAAAGCAGCTGGGCTGGCGTTGAAGATGGAAGCTaGGTTCTCAGACTGTATCAG	+
Preference number: 4 (lower is better) Translates to: YHMAGTPQDHVKESSWAGVEDGS*VLRLYQ Trigger: CTGATACAGTCTGAGAACTCAGCTTCCATCTTCAAC...GCCAGCCCAGCTGCTTTCCTTAACATGGTCCTGAGGAGTGCCAGCCATATGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	CTAATTGCATCAGACGTACTTGAAATAAACACTGAGCAAGGGCCTGGGAGTCAGTGGCAAAGCAGGCGTTaGTGGGCATGGTACGGAGCA	+
Preference number: 4 (lower is better) Translates to: LIASDVLEINTEQGPGSQWQSRR*WAWYGA Trigger: TGCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCA...CTGACTCCCAGGCCCTTGCTCAGTGTTTATTTCAAGTACGTCTGATGCAATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GAAGTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACATCAATGTCGTGCTCCTaGAACAGTTTGTCTAAGCGA	+
Preference number: 4 (lower is better) Translates to: EVWLGSWVYSMLASRGHTSMSCS*NSLSKR Trigger: TCGCTTAGACAAACTGTTGCAGGAGCACGACATTGA...TGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	CACACAGTGGCCCTAATTGCATCAGACGTACTTGAAATAAACACTGAGCAAGGGGCAGTAGCCAATCTCTaGGTAGAGCCAGGCCAGTGC	+
Preference number: 4 (lower is better) Translates to: HTVALIASDVLEINTEQGAVANL*VEPGQC Trigger: GCACTGGCCTGGCTCTACCCAGAGATTGGCTACTGC...CCCTTGCTCAGTGTTTATTTCAAGTACGTCTGATGCAATTAGGGCCACTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	GACGTACTTGAAATAAACACTGAGCAAGGGCCTGGGAGTCAGACCATTTCAGGACTGGGGCCATATGCTTaGAGTCAGGGCAGAGAAAGG	+
Preference number: 4 (lower is better) Translates to: DVLEINTEQGPGSQTISGLGPYA*SQGRER Trigger: CCTTTCTCTGCCCTGACTCCAAGCATATGGCCCCAG...TCCTGAAATGGTCTGACTCCCAGGCCCTTGCTCAGTGTTTATTTCAAGTACGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	ATCCAGGCTCAGAACCTTCCTTGTCCACACGGAAACCAAACTCATCATAGCAGACTGGGGCCATATGCTTaGAGTCAGGGCAGAGAAAGG	+
Preference number: 4 (lower is better) Translates to: IQAQNLPCPHGNQTHHSRLGPYA*SQGRER Trigger: CCTTTCTCTGCCCTGACTCCAAGCATATGGCCCCAG...TCTGCTATGATGAGTTTGGTTTCCGTGTGGACAAGGAAGGTTCTGAGCCTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143147.8
CDS-3UTR GCA 90 bp	CACACAGTGGCCCTAATTGCATCAGACGTACTTGAAATAAACACTGAGCAAGGGGGCGGGGAACACCGATaGTGTTCACATTGGCAAAGC	+
Preference number: 4 (lower is better) Translates to: HTVALIASDVLEINTEQGGGEHR*CSHWQS Trigger: GCTTTGCCAATGTGAACAGCATCGGTGTTCCCCGCC...CCCTTGCTCAGTGTTTATTTCAAGTACGTCTGATGCAATTAGGGCCACTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATGTCCCCGCCTCTTGACAAGCAGCCACCATaGCTGTGCCCTGGCAGTAGC	+
Preference number: 4 (lower is better) Translates to: DGRLALVKGLFTIMSPPLDKQPP*LCPGSS Trigger: GCTACTGCCAGGGCACAGGCATGGTGGCTGCTTGTC...AAGAGGCGGGGACATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	CACACAGTGGCCCTAATTGCATCAGACGTACTTGAAATAAACACTGAGCAAGGGCCGCATCCACAACTGTaGCCTCATGCCATGTGGGAT	+
Preference number: 4 (lower is better) Translates to: HTVALIASDVLEINTEQGPHPQL*PHAMWD Trigger: ATCCCACATGGCATGAGGCCACAGTTGTGGATGCGG...CCCTTGCTCAGTGTTTATTTCAAGTACGTCTGATGCAATTAGGGCCACTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	GGGCTTGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAACCCGCTGGTCAGTCTaGACTCCCAGCAGGGTAGTG	+
Preference number: 4 (lower is better) Translates to: GLGSTKDGRLALVKGLFTTRWSV*TPSRVV Trigger: CACTACCCTGCTGGGAGTCCAGACTGACCAGCGGGT...TGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	GACGTACTTGAAATAAACACTGAGCAAGGGCCTGGGAGTCAGACCATTTCAGGACTCCATGCTGTAGTCTaGGGTCAGCTCCACACTACA	+
Preference number: 4 (lower is better) Translates to: DVLEINTEQGPGSQTISGLHAVV*GQLHTT Trigger: TGTAGTGTGGAGCTGACCCCAGACTACAGCATGGAG...TCCTGAAATGGTCTGACTCCCAGGCCCTTGCTCAGTGTTTATTTCAAGTACGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	CTAATTGCATCAGACGTACTTGAAATAAACACTGAGCAAGGGCCTGGGAGTCAGAGGAAGGACCAGGGCTaGTACCACTTCTCCACAGTG	+
Preference number: 4 (lower is better) Translates to: LIASDVLEINTEQGPGSQRKDQG*YHFSTV Trigger: CACTGTGGAGAAGTGGTACCAGCCCTGGTCCTTCCT...CTGACTCCCAGGCCCTTGCTCAGTGTTTATTTCAAGTACGTCTGATGCAATTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	AGAATAATGTCTTTAATCCCAGCTCTTGGGAGGCAGAAGCAGGCAGATCTCTGTCTGGGGCCATATGCTTaGAGTCAGGGCAGAGAAAGG	+
Preference number: 4 (lower is better) Translates to: RIMSLIPALGRQKQADLCLGPYA*SQGRER Trigger: CCTTTCTCTGCCCTGACTCCAAGCATATGGCCCCAG...ACAGAGATCTGCCTGCTTCTGCCTCCCAAGAGCTGGGATTAAAGACATTATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137004.2
CDS-3UTR CCA 90 bp	GAGAATAATGTCTTTAATCCCAGCTCTTGGGAGGCAGAAGCAGGCAGATCTCTGTTTGCCAGGATCTCCTaGGGCCATATGCTTGGAGTC	+
Preference number: 4 (lower is better) Translates to: ENNVFNPSSWEAEAGRSLFARIS*GHMLGV Trigger: GACTCCAAGCATATGGCCCCAGGAGATCCTGGCAAA...CAGAGATCTGCCTGCTTCTGCCTCCCAAGAGCTGGGATTAAAGACATTATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137004.2
CDS-3UTR GCA 90 bp	GAGAATAATGTCTTTAATCCCAGCTCTTGGGAGGCAGAAGCAGGCAGATCTCTGAGCCACTTCCAGGAATaGCAGGGCTACACAGAGAAA	+
Preference number: 4 (lower is better) Translates to: ENNVFNPSSWEAEAGRSLSHFQE*QGYTEK Trigger: TTTCTCTGTGTAGCCCTGGCATTCCTGGAAGTGGCT...CAGAGATCTGCCTGCTTCTGCCTCCCAAGAGCTGGGATTAAAGACATTATTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137004.2
CDS-3UTR CCA 90 bp	GATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATGTCCCCGCCTCTTTACTGGACAATCAGGTaGCGCAGGACCCGCTGGTCA	+
Preference number: 4 (lower is better) Translates to: DGRLALVKGLFTIMSPPLYWTIR*RRTRWS Trigger: TGACCAGCGGGTCCTGCGCCACCTGATTGTCCAGTA...AAGAGGCGGGGACATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	CCCCGCCTCTTCCCAAGGTTTTTGGTTAGTATAGTATACCATATGGCTGGCACTCCCTCCAAGCAAGGATaGCTTCTTCAATCCGTGTTC	+
Preference number: 4 (lower is better) Translates to: PRLFPRFLVSIVYHMAGTPSKQG*LLQSVF Trigger: GAACACGGATTGAAGAAGCCATCCTTGCTTGGAGGG...AGTGCCAGCCATATGGTATACTATACTAACCAAAAACCTTGGGAAGAGGCGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	CAAACTCATCATAGCAGAGCTCTGGCTGCTCTGAGGATTCTTCTTTCTGCAAAGTTTGCCAGGATCTCCTaGGGCCATATGCTTGGAGTC	+
Preference number: 4 (lower is better) Translates to: QTHHSRALAALRILLSAKFARIS*GHMLGV Trigger: GACTCCAAGCATATGGCCCCAGGAGATCCTGGCAAA...CTTTGCAGAAAGAAGAATCCTCAGAGCAGCCAGAGCTCTGCTATGATGAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143147.8
CDS-3UTR TCA 90 bp	GGGCTTGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAAACAGCCAGGGGTaGCAAGCCCCTCCAAGCAAG	+
Preference number: 4 (lower is better) Translates to: GLGSTKDGRLALVKGLFTINSQG*QAPPSK Trigger: CTTGCTTGGAGGGGCTTGTCACCCCTGGCTGTTTAT...TGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCAAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR TCA 90 bp	CTAATTGCATCAGACGTACTTGAAATAAACACTGAGCAAGGGCCTGGGAGTCAGCATCTATGTCCCAGCTaGAGAGATGGTGCTTCACCA	+
Preference number: 4 (lower is better) Translates to: LIASDVLEINTEQGPGSQHLCPS*RDGASP Trigger: TGGTGAAGCACCATCTCTTCAGCTGGGACATAGATG...CTGACTCCCAGGCCCTTGCTCAGTGTTTATTTCAAGTACGTCTGATGCAATTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GGGCTTGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAGCCGTGAGGAACCAGTaGAGCGTGATAAGAGACAGC	+
Preference number: 4 (lower is better) Translates to: GLGSTKDGRLALVKGLFTAVRNQ*SVIRDS Trigger: GCTGTCTCTTATCACGCTGCACTGGTTCCTCACGGC...TGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCAAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATGTCCCCGCCTCTTGGTTTGGCCTTGGTCTaGAATAAGGTAGGCCAGGTG	+
Preference number: 4 (lower is better) Translates to: DGRLALVKGLFTIMSPPLGLALV*NKVGQV Trigger: CACCTGGCCTACCTTATTGCAGACCAAGGCCAAACC...AAGAGGCGGGGACATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GGGCTTGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAAGCTCATCATCATCGTaGCGCTCAAAGTCCAGCAGG	+
Preference number: 4 (lower is better) Translates to: GLGSTKDGRLALVKGLFTSSSSS*RSKSSR Trigger: CCTGCTGGACTTTGAGCGGCACGATGATGATGAGCT...TGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCAAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	GATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATGTCCCCGCCTCTTCAGCTGAAGAGATGGTaGTTCACCAGCATGTCCTGC	+
Preference number: 4 (lower is better) Translates to: DGRLALVKGLFTIMSPPLQLKRW*FTSMSC Trigger: GCAGGACATGCTGGTGAAGCACCATCTCTTCAGCTG...AAGAGGCGGGGACATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	CACACAGTGGCCCTAATTGCATCAGACGTACTTGAAATAAACACTGAGCAAGGGAGATCCCCAACATCATaGTTATGGGTGAACTCCAGG	+
Preference number: 4 (lower is better) Translates to: HTVALIASDVLEINTEQGRSPTS*LWVNSR Trigger: CCTGGAGTTCACCCATAACCATGATGTTGGGGATCT...CCCTTGCTCAGTGTTTATTTCAAGTACGTCTGATGCAATTAGGGCCACTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	GATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATGTCCCCGCCTCTTTCTGTGCACTGGAAGTaGCGTGCCACACGCAAAATG	+
Preference number: 4 (lower is better) Translates to: DGRLALVKGLFTIMSPPLSVHWK*RATRKM Trigger: CATTTTGCGTGTGGCACGCCACTTCCAGTGCACAGA...AAGAGGCGGGGACATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
3UTR CAA 72 bp	CAGTCTGTTGTATTTGATCCATCAGAATTGAGAAGTTaGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATC	+
Preference number: 4 (lower is better) Translates to: QSVVFDPSELRS*AGVLGLFHAGI Trigger: GATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTCTCAATTCTGATGGATCAAATACAACAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	TGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATGGGAGCTCCCAGTCCTaGGAGAGGCTGAAGGCAAAG	+
Preference number: 4 (lower is better) Translates to: WLNKRWEACSSKRFIYNNGSSQS*ERLKAK Trigger: CTTTGCCTTCAGCCTCTCCCAGGACTGGGAGCTCCC...ATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR TCA 90 bp	GTAGAGAATAATGTCTTTAATCCCAGCTCTTGGGAGGCAGAAGCAGGCAGATCTGGATTCTTCTTTCTGTaGGTATTTTGCCAGGATCTC	+
Preference number: 4 (lower is better) Translates to: VENNVFNPSSWEAEAGRSGFFFL*VFCQDL Trigger: GAGATCCTGGCAAAATACTCACAGAAAGAAGAATCC...AGATCTGCCTGCTTCTGCCTCCCAAGAGCTGGGATTAAAGACATTATTCTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137004.2
CDS-3UTR GCA 90 bp	TGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATAGTTCTTGGGGTCTGTaGACTGGAAGTGGCGTGCCA	+
Preference number: 4 (lower is better) Translates to: WLNKRWEACSSKRFIYNNSSWGL*TGSGVP Trigger: TGGCACGCCACTTCCAGTGCACAGACCCCAAGAACT...ATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	TGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATAGGCGTTGCTGGGCATaGTACGGAGCAGGTCCTTTT	+
Preference number: 4 (lower is better) Translates to: WLNKRWEACSSKRFIYNNRRCWA*YGAGPF Trigger: AAAAGGACCTGCTCCGTACCATGCCCAGCAACGCCT...ATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	TGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATGGTGAGCCTGTCATCTaGCTGCATCCAGGCTCAGAA	+
Preference number: 4 (lower is better) Translates to: WLNKRWEACSSKRFIYNNGEPVI*LHPGSE Trigger: TTCTGAGCCTGGATGCAGCCAGATGACAGGCTCACC...ATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR GCA 90 bp	TGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATTCACCCACCCAGCAGTaGTCATCCTTCTGGGAAATG	+
Preference number: 4 (lower is better) Translates to: WLNKRWEACSSKRFIYNNSPTQQ*SSFWEM Trigger: CATTTCCCAGAAGGATGAGCACTGCTGGGTGGGTGA...ATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CCA 90 bp	TGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATCCACACTACAGTTCTTaGGGTCTGTGCACTGGAAGT	+
Preference number: 4 (lower is better) Translates to: WLNKRWEACSSKRFIYNNPHYSS*GLCTGS Trigger: ACTTCCAGTGCACAGACCCCAAGAACTGTAGTGTGG...ATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS GCA 90 bp	GCCTGTGCCCTGGCAGTAGCCAATCTCTGGGTAGAGCCAGGCCAGTaGTCGGAGGACTCTGCGCAGGCGGGGAACACCGATGCTGTTCAC	+
Preference number: 5 (lower is better) Translates to: ACALAVANLWVEPGQ*SEDSAQAGNTDAVH Trigger: GTGAACAGCATCGGTGTTCCCCGCCTGCGCAGAGTCCTCCGAGCACTGGCCTGGCTCTACCCAGAGATTGGCTACTGCCAGGGCACAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS GCA 90 bp	GCCAGGCCAGTGCTCGGAGGACTCTGCGCAGGCGGGGAACACCGATaGTGTTCACATTGGCAAAGCAGGCGTTGCTGGGCATGGTACGGA	+
Preference number: 5 (lower is better) Translates to: ARPVLGGLCAGGEHR*CSHWQSRRCWAWYG Trigger: TCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTGTTCCCCGCCTGCGCAGAGTCCTCCGAGCACTGGCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	GAGGCTCGAGGCTGGCCAGGGCTCTGCCTTCTGTTGAAGGGAGCCTTCCAGGCAGCCCGTCCCCAGGGTTaGGCCTTGGTCTGCAATAAG	+
Preference number: 5 (lower is better) Translates to: EARGWPGLCLLLKGAFQAARPQG*ALVCNK Trigger: CTTATTGCAGACCAAGGCCAAACCCTGGGGACGGGC...TGCCTGGAAGGCTCCCTTCAACAGAAGGCAGAGCCCTGGCCAGCCTCGAGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS GCA 90 bp	AGAGAGGTTAGTGGTGGTGCCCGTCCCCAGGGTTTGGCCTTGGTCTaGAATAAGGTAGGCCAGGTGCTTGCGACGCTGGGTCTCCACGGC	+
Preference number: 5 (lower is better) Translates to: REVSGGARPQGLALV*NKVGQVLATLGLHG Trigger: GCCGTGGAGACCCAGCGTCGCAAGCACCTGGCCTACCTTATTGCAGACCAAGGCCAAACCCTGGGGACGGGCACCACCACTAACCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 90 bp	CACTTGATCTGGACCCAGCCAGGGCTTCGCAGGAAGGACCAGGGCTaGTACCACTTCTCCACAGTGGGCAGGCTGGAGCAGAGAACCTCC	+
Preference number: 5 (lower is better) Translates to: HLIWTQPGLRRKDQG*YHFSTVGRLEQRTS Trigger: GGAGGTTCTCTGCTCCAGCCTGCCCACTGTGGAGAAGTGGTACCAGCCCTGGTCCTTCCTGCGAAGCCCTGGCTGGGTCCAGATCAAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS TCA 90 bp	GAAGTGATACCAGACTTCCTCCGCTGCGTCCTGCGCCGTACAACCTaGGAGAGGTTAGTGGTGGTGCCCGTCCCCAGGGTTTGGCCTTGG	+
Preference number: 5 (lower is better) Translates to: EVIPDFLRCVLRRTT*ERLVVVPVPRVWPW Trigger: CCAAGGCCAAACCCTGGGGACGGGCACCACCACTAACCTCTCTCAGGTTGTACGGCGCAGGACGCAGCGGAGGAAGTCTGGTATCACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 90 bp	AGCCTAGCTCATCATCATCGTGCCGCTCAAAGTCCAGCAGGGCCTTaGCCCGGCGCCGGTGGCTGCGTAAGCATGCCACGTAGTTCTCAT	+
Preference number: 5 (lower is better) Translates to: SLAHHHRAAQSPAGP*PGAGGCVSMPRSSH Trigger: ATGAGAACTACGTGGCATGCTTACGCAGCCACCGGCGCCGGGCCAAGGCCCTGCTGGACTTTGAGCGGCACGATGATGATGAGCTAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3
CDS-3UTR CAA 90 bp	TCCAGGCAGTCTATGATGGGCGGGCCTGGCAGCCACAGAGCAGCTGGAAGGAGCAGGACCTCCACAAACTaGGCTGGAAACCAGCCTCTC	+
Preference number: 5 (lower is better) Translates to: SRQSMMGGPGSHRAAGRSRTSTN*AGNQPL Trigger: GAGAGGCTGGTTTCCAGCCAAGTTTGTGGAGGTCCT...GCTCCTTCCAGCTGCTCTGTGGCTGCCAGGCCCGCCCATCATAGACTGCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS GCA 90 bp	AGTAGCCAATCTCTGGGTAGAGCCAGGCCAGTGCTCGGAGGACTCTaGGCAGGCGGGGAACACCGATGCTGTTCACATTGGCAAAGCAGG	+
Preference number: 5 (lower is better) Translates to: SSQSLGRARPVLGGL*AGGEHRCCSHWQSR Trigger: CCTGCTTTGCCAATGTGAACAGCATCGGTGTTCCCCGCCTGCGCAGAGTCCTCCGAGCACTGGCCTGGCTCTACCCAGAGATTGGCTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 90 bp	CTCGGAGGACTCTGCGCAGGCGGGGAACACCGATGCTGTTCACATTaGCAAAGCAGGCGTTGCTGGGCATGGTACGGAGCAGGTCCTTTT	+
Preference number: 5 (lower is better) Translates to: LGGLCAGGEHRCCSH*QSRRCWAWYGAGPF Trigger: AAAAGGACCTGCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTGTTCCCCGCCTGCGCAGAGTCCTCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	GGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGCCCAGGGAGACTGCAATCTaGTCCCAGGTGAGATCCCCA	+
Preference number: 5 (lower is better) Translates to: GWGPGSIPCWHLEATQWPRETAI*SQVRSP Trigger: TGGGGATCTCACCTGGGACAAGATTGCAGTCTCCCT...GGGCCACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS CCA 90 bp	TCCTGCAACAGTTTGTCTAAGCGAGGCAGGTACTGGACAATCAGGTaGCGCAGGACCCGCTGGTCAGTCTGGACTCCCAGCAGGGTAGTG	+
Preference number: 5 (lower is better) Translates to: SCNSLSKRGRYWTIR*RRTRWSVWTPSRVV Trigger: CACTACCCTGCTGGGAGTCCAGACTGACCAGCGGGTCCTGCGCCACCTGATTGTCCAGTACCTGCCTCGCTTAGACAAACTGTTGCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS GCA 90 bp	GCAGGCGGGGAACACCGATGCTGTTCACATTGGCAAAGCAGGCGTTaGTGGGCATGGTACGGAGCAGGTCCTTTTCGATCTGTTTGGCAG	+
Preference number: 5 (lower is better) Translates to: AGGEHRCCSHWQSRR*WAWYGAGPFRSVWQ Trigger: CTGCCAAACAGATCGAAAAGGACCTGCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTGTTCCCCGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS GCA 90 bp	CAGCTCCACACTACAGTTCTTGGGGTCTGTGCACTGGAAGTGGCGTaGCACACGCAAAATGGCTTCGCGAAGGTCGGCTACCAGCTCTGT	+
Preference number: 5 (lower is better) Translates to: QLHTTVLGVCALEVA*HTQNGFAKVGYQLC Trigger: ACAGAGCTGGTAGCCGACCTTCGCGAAGCCATTTTGCGTGTGGCACGCCACTTCCAGTGCACAGACCCCAAGAACTGTAGTGTGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3
CDS GCA 90 bp	TCGTCCTCTCCAAAAAGCAGGGAAGTGATACCAGACTTCCTCCGCTaGGTCCTGCGCCGTACAACCTTAAGGCGCAGCATGCCCAGCGTA	+
Preference number: 5 (lower is better) Translates to: SSSPKSREVIPDFLR*VLRRTTLRRSMPSV Trigger: TACGCTGGGCATGCTGCGCCTTAAGGTTGTACGGCGCAGGACGCAGCGGAGGAAGTCTGGTATCACTTCCCTGCTTTTTGGAGAGGACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154904.3
CDS CCA 90 bp	GGCGGGGAACACCGATGCTGTTCACATTGGCAAAGCAGGCGTTGCTaGGCATGGTACGGAGCAGGTCCTTTTCGATCTGTTTGGCAGCGA	+
Preference number: 5 (lower is better) Translates to: GGEHRCCSHWQSRRC*AWYGAGPFRSVWQR Trigger: TCGCTGCCAAACAGATCGAAAAGGACCTGCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTGTTCCCCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 90 bp	TCAATGTCGTGCTCCTGCAACAGTTTGTCTAAGCGAGGCAGGTACTaGACAATCAGGTGGCGCAGGACCCGCTGGTCAGTCTGGACTCCC	+
Preference number: 5 (lower is better) Translates to: SMSCSCNSLSKRGRY*TIRWRRTRWSVWTP Trigger: GGGAGTCCAGACTGACCAGCGGGTCCTGCGCCACCTGATTGTCCAGTACCTGCCTCGCTTAGACAAACTGTTGCAGGAGCACGACATTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	TGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGCCTGCTCCTGCAACAGTTaGTCTAAGCGAGGCAGGTAC	+
Preference number: 5 (lower is better) Translates to: WLGSWVYSMLASRGHTVACSCNS*SKRGRY Trigger: GTACCTGCCTCGCTTAGACAAACTGTTGCAGGAGCA...GGCCACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	CCTCCTAGCCTGAGGGAGGCTCGAGGCTGGCCAGGGCTCTGCCTTCTGTTGAAGATGTCTGACAGCGTGTaGAAGATGGAAGCTGAGTTC	+
Preference number: 5 (lower is better) Translates to: PPSLREARGWPGLCLLLKMSDSV*KMEAEF Trigger: GAACTCAGCTTCCATCTTCAACACGCTGTCAGACAT...CTTCAACAGAAGGCAGAGCCCTGGCCAGCCTCGAGCCTCCCTCAGGCTAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	GTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGTCAGGGGTCAGGACTTaGCCATCTTCGTCCAGCCTG	+
Preference number: 5 (lower is better) Translates to: VWLGSWVYSMLASRGHTVSGVRT*PSSSSL Trigger: CAGGCTGGACGAAGATGGCAAAGTCCTGACCCCTGA...CACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	CCAGGGGTGAGCCTGTCATCTGGCTGCATCCAGGCTCAGAACCTTCCTTGTCCAGTACCTGTGAGTATTTaGCCAGGATCTCCTGGGGCC	+
Preference number: 5 (lower is better) Translates to: PGVSLSSGCIQAQNLPCPVPVSI*PGSPGA Trigger: GGCCCCAGGAGATCCTGGCAAAATACTCACAGGTAC...TGGACAAGGAAGGTTCTGAGCCTGGATGCAGCCAGATGACAGGCTCACCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143147.8
CDS GCA 90 bp	GCGGGAGTACACAGAATCAAAGTCTCTTTCGACTTCACGGCCCGCTaGCTCCTCGATAAACAGCCAGGGGTGACAAGCCCCTCCAAGCAA	+
Preference number: 5 (lower is better) Translates to: AGVHRIKVSFDFTAR*LLDKQPGVTSPSKQ Trigger: TTGCTTGGAGGGGCTTGTCACCCCTGGCTGTTTATCGAGGAGGCAGCGGGCCGTGAAGTCGAAAGAGACTTTGATTCTGTGTACTCCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 90 bp	CTCCTCGATAAACAGCCAGGGGTGACAAGCCCCTCCAAGCAAGGATaGCTTCTTCAATCCGTGTTCAAACAGGGCCTTGAGGGCTGGGCA	+
Preference number: 5 (lower is better) Translates to: LLDKQPGVTSPSKQG*LLQSVFKQGLEGWA Trigger: TGCCCAGCCCTCAAGGCCCTGTTTGAACACGGATTGAAGAAGCCATCCTTGCTTGGAGGGGCTTGTCACCCCTGGCTGTTTATCGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS TCA 90 bp	CTCCAAGCAAGGATGGCTTCTTCAATCCGTGTTCAAACAGGGCCTTaGGGGCTGGGCAGAGGGTTCCTCGCACGAGGTCTGTTACTCCTT	+
Preference number: 5 (lower is better) Translates to: LQARMASSIRVQTGP*GLGRGFLARGLLLL Trigger: AAGGAGTAACAGACCTCGTGCGAGGAACCCTCTGCCCAGCCCTCAAGGCCCTGTTTGAACACGGATTGAAGAAGCCATCCTTGCTTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139517.9 ENSMUST00000154904.3
CDS GCA 90 bp	CCATCTATGTCCCAGCTGAAGAGATGGTGCTTCACCAGCATGTCCTaGACACCCTCCTTCAGGGGCTGCTTTTCCTCCTCTCTCCTAGCA	+
Preference number: 5 (lower is better) Translates to: PSMSQLKRWCFTSMS*TPSFRGCFSSSLLA Trigger: TGCTAGGAGAGAGGAGGAAAAGCAGCCCCTGAAGGAGGGTGTGCAGGACATGCTGGTGAAGCACCATCTCTTCAGCTGGGACATAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS CCA 90 bp	CAAGGATGGCTTCTTCAATCCGTGTTCAAACAGGGCCTTGAGGGCTaGGCAGAGGGTTCCTCGCACGAGGTCTGTTACTCCTTCTGTCAC	+
Preference number: 5 (lower is better) Translates to: QGWLLQSVFKQGLEG*AEGSSHEVCYSFCH Trigger: GTGACAGAAGGAGTAACAGACCTCGTGCGAGGAACCCTCTGCCCAGCCCTCAAGGCCCTGTTTGAACACGGATTGAAGAAGCCATCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139517.9 ENSMUST00000154904.3
CDS GCA 90 bp	GCTGGAAACCAGCCTCTCAGGCCGTTCAGCTCACCCACCCAGCAGTaGTCATCCTTCTGGGAAATGATCGTGATGATGTCATTTTTGCGG	+
Preference number: 5 (lower is better) Translates to: AGNQPLRPFSSPTQQ*SSFWEMIVMMSFLR Trigger: CCGCAAAAATGACATCATCACGATCATTTCCCAGAAGGATGAGCACTGCTGGGTGGGTGAGCTGAACGGCCTGAGAGGCTGGTTTCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3
CDS CCA 90 bp	GAACACCGATGCTGTTCACATTGGCAAAGCAGGCGTTGCTGGGCATaGTACGGAGCAGGTCCTTTTCGATCTGTTTGGCAGCGATGGTCT	+
Preference number: 5 (lower is better) Translates to: EHRCCSHWQSRRCWA*YGAGPFRSVWQRWS Trigger: AGACCATCGCTGCCAAACAGATCGAAAAGGACCTGCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 90 bp	CTCCTCGATAAACAGCCAGGGGTGACAAGCCCCTCCAAGCAAGGATaGCTTCTTCAATCCGTGTTCAAACAGGGCCTCTTTGCTTCGCTC	+
Preference number: 5 (lower is better) Translates to: LLDKQPGVTSPSKQG*LLQSVFKQGLFASL Trigger: GAGCGAAGCAAAGAGGCCCTGTTTGAACACGGATTGAAGAAGCCATCCTTGCTTGGAGGGGCTTGTCACCCCTGGCTGTTTATCGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124845.9
CDS GCA 90 bp	GCCACACGCAAAATGGCTTCGCGAAGGTCGGCTACCAGCTCTGTTTaGTTGATGTTCTTTGCCTTGAGAGCTTCTAGGTCGTCCTCTCCA	+
Preference number: 5 (lower is better) Translates to: ATRKMASRRSATSSV*LMFFALRASRSSSP Trigger: TGGAGAGGACGACCTAGAAGCTCTCAAGGCAAAGAACATCAAGCAAACAGAGCTGGTAGCCGACCTTCGCGAAGCCATTTTGCGTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3
CDS-3UTR CAA 90 bp	ATTGAGAAGTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCTCCACACTACAGTTCTaGGGGTCTGTGCACTGGAAG	+
Preference number: 5 (lower is better) Translates to: IEKFGWGPGSIPCWHLEASTLQF*GSVHWK Trigger: CTTCCAGTGCACAGACCCCAAGAACTGTAGTGTGGA...GGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTCTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	ATTGAGAAGTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCGCAATGGAGTACTCTTaGCTTCGCTCATCCAGGACC	+
Preference number: 5 (lower is better) Translates to: IEKFGWGPGSIPCWHLEAAMEYS*LRSSRT Trigger: GGTCCTGGATGAGCGAAGCAAAGAGTACTCCATTGC...GGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTCTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS CCA 90 bp	ATAAGTGAGCGGAGCTTGACATCCATTTGTGCGTGTGCTGCATCATaGGTCACATTCACAGACTGCACTGCCCGGTACAGCAGCTCTTCA	+
Preference number: 5 (lower is better) Translates to: ISERSLTSICACAAS*VTFTDCTARYSSSS Trigger: TGAAGAGCTGCTGTACCGGGCAGTGCAGTCTGTGAATGTGACCCATGATGCAGCACACGCACAAATGGATGTCAAGCTCCGCTCACTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 90 bp	TGCTCTGAGGATTCTTCTTTCTGTGAGTATTTTGCCAGGATCTCCTaGGGCCATATGCTTGGAGTCAGGGCAGAGAAAGGGCCACTGGCA	+
Preference number: 5 (lower is better) Translates to: CSEDSSFCEYFARIS*GHMLGVRAEKGPLA Trigger: TGCCAGTGGCCCTTTCTCTGCCCTGACTCCAAGCATATGGCCCCAGGAGATCCTGGCAAAATACTCACAGAAAGAAGAATCCTCAGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000137004.2 ENSMUST00000137255.3 ENSMUST00000139517.9 ENSMUST00000228971.2 ENSMUST00000229727.2
CDS-3UTR CAA 90 bp	GTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCACACAGTGGCGATGGTCTCATCGTaGGAGCTGTTCTTTATAATC	+
Preference number: 5 (lower is better) Translates to: VWLGSWVYSMLASRGHTVAMVSS*ELFFII Trigger: GATTATAAAGAACAGCTCCAACGATGAGACCATCGC...CACTGTGTGGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	GAGAATAATGTCTTTAATCCCAGCTCTTGGGAGGCAGAAGCAGGCAGATCTCTGCCTGGGGCCATATGCTaGGAGTCAGGGCAGAGAAAG	+
Preference number: 5 (lower is better) Translates to: ENNVFNPSSWEAEAGRSLPGAIC*ESGQRK Trigger: CTTTCTCTGCCCTGACTCCAAGCATATGGCCCCAGG...CAGAGATCTGCCTGCTTCTGCCTCCCAAGAGCTGGGATTAAAGACATTATTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137004.2
CDS-3UTR CAA 90 bp	GACGTACTTGAAATAAACACTGAGCAAGGGCCTGGGAGTCAGACCATTTCAGGACCTGGGGCCATATGCTaGGAGTCAGGGCAGAGAAAG	+
Preference number: 5 (lower is better) Translates to: DVLEINTEQGPGSQTISGPGAIC*ESGQRK Trigger: CTTTCTCTGCCCTGACTCCAAGCATATGGCCCCAGG...TCCTGAAATGGTCTGACTCCCAGGCCCTTGCTCAGTGTTTATTTCAAGTACGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	ATTGAGAAGTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATCTAGAGGCCTTGATGTTCTTTGCCTaGAGAGCTTCTAGGTCGTCC	+
Preference number: 5 (lower is better) Translates to: IEKFGWGPGSIPCWHLEALMFFA*RASRSS Trigger: GGACGACCTAGAAGCTCTCAAGGCAAAGAACATCAA...GGCCTCTAGATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTCTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	GCAAGGGCCTGGGAGTCAGACCATTTCAGGAGGGGTAGCTTTTGTGGAACTCAGGTGATGATGTCATTTTaGCGGAAGCCTAGCTCATCA	+
Preference number: 5 (lower is better) Translates to: ARAWESDHFRRGSFCGTQVMMSF*RKPSSS Trigger: TGATGAGCTAGGCTTCCGCAAAAATGACATCATCAC...CTGAGTTCCACAAAAGCTACCCCTCCTGAAATGGTCTGACTCCCAGGCCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	CAAACTCATCATAGCAGAGCTCTGGCTGCTCTGAGGATTCTTCTTTCTGCAAAGCCTGGGGCCATATGCTaGGAGTCAGGGCAGAGAAAG	+
Preference number: 5 (lower is better) Translates to: QTHHSRALAALRILLSAKPGAIC*ESGQRK Trigger: CTTTCTCTGCCCTGACTCCAAGCATATGGCCCCAGG...CTTTGCAGAAAGAAGAATCCTCAGAGCAGCCAGAGCTCTGCTATGATGAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143147.8
CDS-3UTR CAA 90 bp	GATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATGTCCCCGCCTCTTTTGGCAAAGCAGGCGTaGCTGGGCATGGTACGGAGC	+
Preference number: 5 (lower is better) Translates to: DGRLALVKGLFTIMSPPLLAKQA*LGMVRS Trigger: GCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAA...AAGAGGCGGGGACATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	GACGTACTTGAAATAAACACTGAGCAAGGGCCTGGGAGTCAGACCATTTCAGGATCCTTTTCGATCTGTTaGGCAGCGATGGTCTCATCG	+
Preference number: 5 (lower is better) Translates to: DVLEINTEQGPGSQTISGSFSIC*AAMVSS Trigger: CGATGAGACCATCGCTGCCAAACAGATCGAAAAGGA...TCCTGAAATGGTCTGACTCCCAGGCCCTTGCTCAGTGTTTATTTCAAGTACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	TCCATCAGAATTGAGAAGTTTGGCTGGGGTCCTGGGTCTATTCCATGCTGGCATACCAGCTCTGTTTGCTaGATGTTCTTTGCCTTGAGA	+
Preference number: 5 (lower is better) Translates to: SIRIEKFGWGPGSIPCWHTSSVC*MFFALR Trigger: TCTCAAGGCAAAGAACATCAAGCAAACAGAGCTGGT...ATGCCAGCATGGAATAGACCCAGGACCCCAGCCAAACTTCTCAATTCTGATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	GACGTACTTGAAATAAACACTGAGCAAGGGCCTGGGAGTCAGACCATTTCAGGAGGCTACCAGCTCTGTTaGCTTGATGTTCTTTGCCTT	+
Preference number: 5 (lower is better) Translates to: DVLEINTEQGPGSQTISGGYQLC*LDVLCL Trigger: AAGGCAAAGAACATCAAGCAAACAGAGCTGGTAGCC...TCCTGAAATGGTCTGACTCCCAGGCCCTTGCTCAGTGTTTATTTCAAGTACGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	CTAATTGCATCAGACGTACTTGAAATAAACACTGAGCAAGGGCCTGGGAGTCAGATAAGTGAGCGGAGCTaGACATCCATTTGTGCGTGT	+
Preference number: 5 (lower is better) Translates to: LIASDVLEINTEQGPGSQISERS*TSICAC Trigger: ACACGCACAAATGGATGTCAAGCTCCGCTCACTTAT...CTGACTCCCAGGCCCTTGCTCAGTGTTTATTTCAAGTACGTCTGATGCAATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS-3UTR CAA 90 bp	GTAGAGAATAATGTCTTTAATCCCAGCTCTTGGGAGGCAGAAGCAGGCAGATCTCAGAGAAAGTCTTCCTaGTCCACACGGAAACCAAAC	+
Preference number: 5 (lower is better) Translates to: VENNVFNPSSWEAEAGRSQRKSS*STRKPN Trigger: GTTTGGTTTCCGTGTGGACAAGGAAGACTTTCTCTG...AGATCTGCCTGCTTCTGCCTCCCAAGAGCTGGGATTAAAGACATTATTCTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137004.2
CDS-3UTR CAA 90 bp	TGGCTCAACAAAAGATGGGAGGCTTGCTCTAGTAAAAGGTTTATTTACAATAATGGCTCAGAACCTTCCTaGTCCACACGGAAACCAAAC	+
Preference number: 5 (lower is better) Translates to: WLNKRWEACSSKRFIYNNGSEPS*STRKPN Trigger: GTTTGGTTTCCGTGTGGACAAGGAAGGTTCTGAGCC...ATTATTGTAAATAAACCTTTTACTAGAGCAAGCCTCCCATCTTTTGTTGAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS CCA 72 bp	TGGACCCAGCCAGGGCTTCGCAGGAAGGACCAGGGCTaGTACCACTTCTCCACAGTGGGCAGGCTGGAGCAG	+
Preference number: 6 (lower is better) Translates to: WTQPGLRRKDQG*YHFSTVGRLEQ Trigger: CTGCTCCAGCCTGCCCACTGTGGAGAAGTGGTACCAGCCCTGGTCCTTCCTGCGAAGCCCTGGCTGGGTCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS TCA 72 bp	CCAGACTTCCTCCGCTGCGTCCTGCGCCGTACAACCTaGGAGAGGTTAGTGGTGGTGCCCGTCCCCAGGGTT	+
Preference number: 6 (lower is better) Translates to: PDFLRCVLRRTT*ERLVVVPVPRV Trigger: AACCCTGGGGACGGGCACCACCACTAACCTCTCTCAGGTTGTACGGCGCAGGACGCAGCGGAGGAAGTCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 72 bp	AGCCACCATGCCTGTGCCCTGGCAGTAGCCAATCTCTaGGTAGAGCCAGGCCAGTGCTCGGAGGACTCTGCG	+
Preference number: 6 (lower is better) Translates to: SHHACALAVANL*VEPGQCSEDSA Trigger: CGCAGAGTCCTCCGAGCACTGGCCTGGCTCTACCCAGAGATTGGCTACTGCCAGGGCACAGGCATGGTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS GCA 72 bp	GTGCTCGGAGGACTCTGCGCAGGCGGGGAACACCGATaGTGTTCACATTGGCAAAGCAGGCGTTGCTGGGCA	+
Preference number: 6 (lower is better) Translates to: VLGGLCAGGEHR*CSHWQSRRCWA Trigger: TGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTGTTCCCCGCCTGCGCAGAGTCCTCCGAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS GCA 72 bp	AGTGGTGGTGCCCGTCCCCAGGGTTTGGCCTTGGTCTaGAATAAGGTAGGCCAGGTGCTTGCGACGCTGGGT	+
Preference number: 6 (lower is better) Translates to: SGGARPQGLALV*NKVGQVLATLG Trigger: ACCCAGCGTCGCAAGCACCTGGCCTACCTTATTGCAGACCAAGGCCAAACCCTGGGGACGGGCACCACCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 72 bp	GCAAAGCAGCAGAGGACACGGAGCTCACACTTGATCTaGACCCAGCCAGGGCTTCGCAGGAAGGACCAGGGC	+
Preference number: 6 (lower is better) Translates to: AKQQRTRSSHLI*TQPGLRRKDQG Trigger: GCCCTGGTCCTTCCTGCGAAGCCCTGGCTGGGTCCAGATCAAGTGTGAGCTCCGTGTCCTCTGCTGCTTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 90 bp	GCTCGGAGGACTCTGCGCAGGCGGGGAACACCGATGCTGTTCACATaGGCAAAGCAGGCGTTGCTGGGCATGGTACGGAGCAGGTCCTTT	+
Preference number: 6 (lower is better) Translates to: ARRTLRRRGTPMLFT*AKQALLGMVRSRSF Trigger: AAAGGACCTGCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTGTTCCCCGCCTGCGCAGAGTCCTCCGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 72 bp	CTCTGCGCAGGCGGGGAACACCGATGCTGTTCACATTaGCAAAGCAGGCGTTGCTGGGCATGGTACGGAGCA	+
Preference number: 6 (lower is better) Translates to: LCAGGEHRCCSH*QSRRCWAWYGA Trigger: TGCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTGTTCCCCGCCTGCGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 72 bp	ACTCTGCGCAGGCGGGGAACACCGATGCTGTTCACATaGGCAAAGCAGGCGTTGCTGGGCATGGTACGGAGC	+
Preference number: 6 (lower is better) Translates to: TLRRRGTPMLFT*AKQALLGMVRS Trigger: GCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTGTTCCCCGCCTGCGCAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 72 bp	GAGGTTAGTGGTGGTGCCCGTCCCCAGGGTTTGGCCTaGGTCTGCAATAAGGTAGGCCAGGTGCTTGCGACG	+
Preference number: 6 (lower is better) Translates to: EVSGGARPQGLA*VCNKVGQVLAT Trigger: CGTCGCAAGCACCTGGCCTACCTTATTGCAGACCAAGGCCAAACCCTGGGGACGGGCACCACCACTAACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 90 bp	AACCTGAGAGAGGTTAGTGGTGGTGCCCGTCCCCAGGGTTTGGCCTaGGTCTGCAATAAGGTAGGCCAGGTGCTTGCGACGCTGGGTCTC	+
Preference number: 6 (lower is better) Translates to: NLREVSGGARPQGLA*VCNKVGQVLATLGL Trigger: GAGACCCAGCGTCGCAAGCACCTGGCCTACCTTATTGCAGACCAAGGCCAAACCCTGGGGACGGGCACCACCACTAACCTCTCTCAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS GCA 72 bp	GCCGCATCCACAACTGTGGCCTCATGCCATGTGGGATaGCAGCCAGCACTAGGGAACGGAGTTTCTCAGAGC	+
Preference number: 6 (lower is better) Translates to: AASTTVASCHVG*QPALGNGVSQS Trigger: GCTCTGAGAAACTCCGTTCCCTAGTGCTGGCTGGCATCCCACATGGCATGAGGCCACAGTTGTGGATGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS GCA 72 bp	AAAAACAGGTCCCAGATGCGCAGCAGCAGTCTGATGTaGACCACGCTGGCGAAGGCCGTGAGGAACCAGTGC	+
Preference number: 6 (lower is better) Translates to: KNRSQMRSSSLM*TTLAKAVRNQC Trigger: GCACTGGTTCCTCACGGCCTTCGCCAGCGTGGTGCACATCAGACTGCTGCTGCGCATCTGGGACCTGTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 72 bp	AGTTTGTCTAAGCGAGGCAGGTACTGGACAATCAGGTaGCGCAGGACCCGCTGGTCAGTCTGGACTCCCAGC	+
Preference number: 6 (lower is better) Translates to: SLSKRGRYWTIR*RRTRWSVWTPS Trigger: GCTGGGAGTCCAGACTGACCAGCGGGTCCTGCGCCACCTGATTGTCCAGTACCTGCCTCGCTTAGACAAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 72 bp	CTGAAGGCAAAGCAGCAGAGGACACGGAGCTCACACTaGATCTGGACCCAGCCAGGGCTTCGCAGGAAGGAC	+
Preference number: 6 (lower is better) Translates to: LKAKQQRTRSSH*IWTQPGLRRKD Trigger: GTCCTTCCTGCGAAGCCCTGGCTGGGTCCAGATCAAGTGTGAGCTCCGTGTCCTCTGCTGCTTTGCCTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 90 bp	CGCAGGCGGGGAACACCGATGCTGTTCACATTGGCAAAGCAGGCGTaGCTGGGCATGGTACGGAGCAGGTCCTTTTCGATCTGTTTGGCA	+
Preference number: 6 (lower is better) Translates to: RRRGTPMLFTLAKQA*LGMVRSRSFSICLA Trigger: TGCCAAACAGATCGAAAAGGACCTGCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTGTTCCCCGCCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 90 bp	ACAGACTGCACTGCCCGGTACAGCAGCTCTTCAGGGGTCAGGACTTaGCCATCTTCGTCCAGCCTGTATGTCTTACAGAGCACCAGGCGG	+
Preference number: 6 (lower is better) Translates to: TDCTARYSSSSGVRT*PSSSSLYVLQSTRR Trigger: CCGCCTGGTGCTCTGTAAGACATACAGGCTGGACGAAGATGGCAAAGTCCTGACCCCTGAAGAGCTGCTGTACCGGGCAGTGCAGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS TCA 72 bp	AGGATGGCTTCTTCAATCCGTGTTCAAACAGGGCCTTaGGGGCTGGGCAGAGGGTTCCTCGCACGAGGTCTG	+
Preference number: 6 (lower is better) Translates to: RMASSIRVQTGP*GLGRGFLARGL Trigger: CAGACCTCGTGCGAGGAACCCTCTGCCCAGCCCTCAAGGCCCTGTTTGAACACGGATTGAAGAAGCCATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139517.9 ENSMUST00000154904.3
CDS CCA 72 bp	TGCTCCTGCAACAGTTTGTCTAAGCGAGGCAGGTACTaGACAATCAGGTGGCGCAGGACCCGCTGGTCAGTC	+
Preference number: 6 (lower is better) Translates to: CSCNSLSKRGRY*TIRWRRTRWSV Trigger: GACTGACCAGCGGGTCCTGCGCCACCTGATTGTCCAGTACCTGCCTCGCTTAGACAAACTGTTGCAGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 72 bp	GGTCTGTGCACTGGAAGTGGCGTGCCACACGCAAAATaGCTTCGCGAAGGTCGGCTACCAGCTCTGTTTGCT	+
Preference number: 6 (lower is better) Translates to: GLCTGSGVPHAK*LREGRLPALFA Trigger: AGCAAACAGAGCTGGTAGCCGACCTTCGCGAAGCCATTTTGCGTGTGGCACGCCACTTCCAGTGCACAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3
CDS CCA 72 bp	TGCTGTAGTCTGGGGTCAGCTCCACACTACAGTTCTTaGGGTCTGTGCACTGGAAGTGGCGTGCCACACGCA	+
Preference number: 6 (lower is better) Translates to: CCSLGSAPHYSS*GLCTGSGVPHA Trigger: TGCGTGTGGCACGCCACTTCCAGTGCACAGACCCCAAGAACTGTAGTGTGGAGCTGACCCCAGACTACAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3
CDS CCA 72 bp	CTCATGGTCCCGCTGGTGGCTCTCCATGCTGTAGTCTaGGGTCAGCTCCACACTACAGTTCTTGGGGTCTGT	+
Preference number: 6 (lower is better) Translates to: LMVPLVALHAVV*GQLHTTVLGVC Trigger: ACAGACCCCAAGAACTGTAGTGTGGAGCTGACCCCAGACTACAGCATGGAGAGCCACCAGCGGGACCATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3
CDS CAA 90 bp	CCTCCAAGCAAGGATGGCTTCTTCAATCCGTGTTCAAACAGGGCCTaGAGGGCTGGGCAGAGGGTTCCTCGCACGAGGTCTGTTACTCCT	+
Preference number: 6 (lower is better) Translates to: PPSKDGFFNPCSNRA*RAGQRVPRTRSVTP Trigger: AGGAGTAACAGACCTCGTGCGAGGAACCCTCTGCCCAGCCCTCAAGGCCCTGTTTGAACACGGATTGAAGAAGCCATCCTTGCTTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139517.9 ENSMUST00000154904.3
CDS TCA 72 bp	GAGCTTCTAGGTCGTCCTCTCCAAAAAGCAGGGAAGTaGTACCAGACTTCCTCCGCTGCGTCCTGCGCCGTA	+
Preference number: 6 (lower is better) Translates to: ELLGRPLQKAGK*YQTSSAASCAV Trigger: TACGGCGCAGGACGCAGCGGAGGAAGTCTGGTATCACTTCCCTGCTTTTTGGAGAGGACGACCTAGAAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3
CDS GCA 72 bp	ACTACAGTTCTTGGGGTCTGTGCACTGGAAGTGGCGTaGCACACGCAAAATGGCTTCGCGAAGGTCGGCTAC	+
Preference number: 6 (lower is better) Translates to: TTVLGVCALEVA*HTQNGFAKVGY Trigger: GTAGCCGACCTTCGCGAAGCCATTTTGCGTGTGGCACGCCACTTCCAGTGCACAGACCCCAAGAACTGTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3
CDS GCA 72 bp	CACAGAATCAAAGTCTCTTTCGACTTCACGGCCCGCTaGCTCCTCGATAAACAGCCAGGGGTGACAAGCCCC	+
Preference number: 6 (lower is better) Translates to: HRIKVSFDFTAR*LLDKQPGVTSP Trigger: GGGGCTTGTCACCCCTGGCTGTTTATCGAGGAGGCAGCGGGCCGTGAAGTCGAAAGAGACTTTGATTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS GCA 72 bp	CCAAAAAGCAGGGAAGTGATACCAGACTTCCTCCGCTaGGTCCTGCGCCGTACAACCTTAAGGCGCAGCATG	+
Preference number: 6 (lower is better) Translates to: PKSREVIPDFLR*VLRRTTLRRSM Trigger: CATGCTGCGCCTTAAGGTTGTACGGCGCAGGACGCAGCGGAGGAAGTCTGGTATCACTTCCCTGCTTTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154904.3
CDS CCA 72 bp	TCCACACTACAGTTCTTGGGGTCTGTGCACTGGAAGTaGCGTGCCACACGCAAAATGGCTTCGCGAAGGTCG	+
Preference number: 6 (lower is better) Translates to: STLQFLGSVHWK*RATRKMASRRS Trigger: CGACCTTCGCGAAGCCATTTTGCGTGTGGCACGCCACTTCCAGTGCACAGACCCCAAGAACTGTAGTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3
CDS CCA 72 bp	CTTCTTCAATCCGTGTTCAAACAGGGCCTTGAGGGCTaGGCAGAGGGTTCCTCGCACGAGGTCTGTTACTCC	+
Preference number: 6 (lower is better) Translates to: LLQSVFKQGLEG*AEGSSHEVCYS Trigger: GGAGTAACAGACCTCGTGCGAGGAACCCTCTGCCCAGCCCTCAAGGCCCTGTTTGAACACGGATTGAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139517.9 ENSMUST00000154904.3
CDS CAA 90 bp	GTTGTACCTGTGAGTATTTTGCCAGGATCTCCTGGGGCCATATGCTaGGAGTCAGGGCAGAGAAAGGGCCACTGGCAGAAGGCGTGTGGT	+
Preference number: 6 (lower is better) Translates to: VVPVSILPGSPGAIC*ESGQRKGHWQKACG Trigger: ACCACACGCCTTCTGCCAGTGGCCCTTTCTCTGCCCTGACTCCAAGCATATGGCCCCAGGAGATCCTGGCAAAATACTCACAGGTACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143147.8
CDS GCA 72 bp	CTGCCCGGTACAGCAGCTCTTCAGGGGTCAGGACTTTaGCATCTTCGTCCAGCCTGTATGTCTTACAGAGCA	+
Preference number: 6 (lower is better) Translates to: LPGTAALQGSGL*HLRPACMSYRA Trigger: TGCTCTGTAAGACATACAGGCTGGACGAAGATGGCAAAGTCCTGACCCCTGAAGAGCTGCTGTACCGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS GCA 72 bp	CTGTCACAGAGTCGTCCCCCGCAATGGAGTACTCTTTaGTTCGCTCATCCAGGACCTCCACAAACTTGGCTG	+
Preference number: 6 (lower is better) Translates to: LSQSRPPQWSTL*FAHPGPPQTWL Trigger: CAGCCAAGTTTGTGGAGGTCCTGGATGAGCGAAGCAAAGAGTACTCCATTGCGGGGGACGACTCTGTGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139517.9 ENSMUST00000154904.3
CDS CCA 72 bp	CGGAGCTTGACATCCATTTGTGCGTGTGCTGCATCATaGGTCACATTCACAGACTGCACTGCCCGGTACAGC	+
Preference number: 6 (lower is better) Translates to: RSLTSICACAAS*VTFTDCTARYS Trigger: GCTGTACCGGGCAGTGCAGTCTGTGAATGTGACCCATGATGCAGCACACGCACAAATGGATGTCAAGCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 72 bp	CGGAGTTTCTCAGAGCGGGGGAGGGAGACTGCAATCTaGTCCCAGGTGAGATCCCCAACATCATGGTTATGG	+
Preference number: 6 (lower is better) Translates to: RSFSERGRETAI*SQVRSPTSWLW Trigger: CCATAACCATGATGTTGGGGATCTCACCTGGGACAAGATTGCAGTCTCCCTCCCCCGCTCTGAGAAACTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 72 bp	GGAACACCGATGCTGTTCACATTGGCAAAGCAGGCGTaGCTGGGCATGGTACGGAGCAGGTCCTTTTCGATC	+
Preference number: 6 (lower is better) Translates to: GTPMLFTLAKQA*LGMVRSRSFSI Trigger: GATCGAAAAGGACCTGCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 72 bp	ACTGCCCGGTACAGCAGCTCTTCAGGGGTCAGGACTTaGCCATCTTCGTCCAGCCTGTATGTCTTACAGAGC	+
Preference number: 6 (lower is better) Translates to: TARYSSSSGVRT*PSSSSLYVLQS Trigger: GCTCTGTAAGACATACAGGCTGGACGAAGATGGCAAAGTCCTGACCCCTGAAGAGCTGCTGTACCGGGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 90 bp	ACTAGGGAACGGAGTTTCTCAGAGCGGGGGAGGGAGACTGCAATCTaGTCCCAGGTGAGATCCCCAACATCATGGTTATGGGTGAACTCC	+
Preference number: 6 (lower is better) Translates to: TRERSFSERGRETAI*SQVRSPTSWLWVNS Trigger: GGAGTTCACCCATAACCATGATGTTGGGGATCTCACCTGGGACAAGATTGCAGTCTCCCTCCCCCGCTCTGAGAAACTCCGTTCCCTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 90 bp	TGCAGCGTGATAAGAGACAGCTCAATGTCGTGCTCCTGCAACAGTTaGTCTAAGCGAGGCAGGTACTGGACAATCAGGTGGCGCAGGACC	+
Preference number: 6 (lower is better) Translates to: CSVIRDSSMSCSCNS*SKRGRYWTIRWRRT Trigger: GGTCCTGCGCCACCTGATTGTCCAGTACCTGCCTCGCTTAGACAAACTGTTGCAGGAGCACGACATTGAGCTGTCTCTTATCACGCTGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 90 bp	CTTCTTTCTGTGAGTATTTTGCCAGGATCTCCTGGGGCCATATGCTaGGAGTCAGGGCAGAGAAAGGGCCACTGGCAGAAGGCGTGTGGT	+
Preference number: 6 (lower is better) Translates to: LLSVSILPGSPGAIC*ESGQRKGHWQKACG Trigger: ACCACACGCCTTCTGCCAGTGGCCCTTTCTCTGCCCTGACTCCAAGCATATGGCCCCAGGAGATCCTGGCAAAATACTCACAGAAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000137004.2 ENSMUST00000137255.3 ENSMUST00000139517.9 ENSMUST00000228971.2 ENSMUST00000229727.2
CDS GCA 72 bp	GAACACCGATGCTGTTCACATTGGCAAAGCAGGCGTTaGTGGGCATGGTACGGAGCAGGTCCTTTTCGATCT	+
Preference number: 6 (lower is better) Translates to: EHRCCSHWQSRR*WAWYGAGPFRS Trigger: AGATCGAAAAGGACCTGCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 72 bp	TGCTGTTCACATTGGCAAAGCAGGCGTTGCTGGGCATaGTACGGAGCAGGTCCTTTTCGATCTGTTTGGCAG	+
Preference number: 6 (lower is better) Translates to: CCSHWQSRRCWA*YGAGPFRSVWQ Trigger: CTGCCAAACAGATCGAAAAGGACCTGCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 72 bp	CACCGATGCTGTTCACATTGGCAAAGCAGGCGTTGCTaGGCATGGTACGGAGCAGGTCCTTTTCGATCTGTT	+
Preference number: 6 (lower is better) Translates to: HRCCSHWQSRRC*AWYGAGPFRSV Trigger: AACAGATCGAAAAGGACCTGCTCCGTACCATGCCCAGCAACGCCTGCTTTGCCAATGTGAACAGCATCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 72 bp	CTGTTACTCCTTCTGTCACAGAGTCGTCCCCCGCAATaGAGTACTCTTTGCTTCGCTCATCCAGGACCTCCA	+
Preference number: 6 (lower is better) Translates to: LLLLLSQSRPPQ*STLCFAHPGPP Trigger: TGGAGGTCCTGGATGAGCGAAGCAAAGAGTACTCCATTGCGGGGGACGACTCTGTGACAGAAGGAGTAACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139517.9 ENSMUST00000154904.3
CDS CCA 72 bp	AAACAGCCAGGGGTGACAAGCCCCTCCAAGCAAGGATaGCTTCTTCAATCCGTGTTCAAACAGGGCCTTGAG	+
Preference number: 6 (lower is better) Translates to: KQPGVTSPSKQG*LLQSVFKQGLE Trigger: CTCAAGGCCCTGTTTGAACACGGATTGAAGAAGCCATCCTTGCTTGGAGGGGCTTGTCACCCCTGGCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139517.9
CDS CAA 72 bp	TCTGTCACAGAGTCGTCCCCCGCAATGGAGTACTCTTaGCTTCGCTCATCCAGGACCTCCACAAACTTGGCT	+
Preference number: 6 (lower is better) Translates to: SVTESSPAMEYS*LRSSRTSTNLA Trigger: AGCCAAGTTTGTGGAGGTCCTGGATGAGCGAAGCAAAGAGTACTCCATTGCGGGGGACGACTCTGTGACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139517.9 ENSMUST00000154904.3
CDS CCA 72 bp	AAACAGCCAGGGGTGACAAGCCCCTCCAAGCAAGGATaGCTTCTTCAATCCGTGTTCAAACAGGGCCTCTTT	+
Preference number: 6 (lower is better) Translates to: KQPGVTSPSKQG*LLQSVFKQGLF Trigger: AAAGAGGCCCTGTTTGAACACGGATTGAAGAAGCCATCCTTGCTTGGAGGGGCTTGTCACCCCTGGCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124845.9
CDS CAA 90 bp	AGCAGAGCTCTGGCTGCTCTGAGGATTCTTCTTTCTGTGAGTATTTaGCCAGGATCTCCTGGGGCCATATGCTTGGAGTCAGGGCAGAGA	+
Preference number: 6 (lower is better) Translates to: SRALAALRILLSVSI*PGSPGAICLESGQR Trigger: TCTCTGCCCTGACTCCAAGCATATGGCCCCAGGAGATCCTGGCAAAATACTCACAGAAAGAAGAATCCTCAGAGCAGCCAGAGCTCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000137004.2 ENSMUST00000137255.3 ENSMUST00000139517.9 ENSMUST00000228971.2 ENSMUST00000229727.2
CDS GCA 72 bp	TGCAGCGTGATAAGAGACAGCTCAATGTCGTGCTCCTaGAACAGTTTGTCTAAGCGAGGCAGGTACTGGACA	+
Preference number: 6 (lower is better) Translates to: CSVIRDSSMSCS*NSLSKRGRYWT Trigger: TGTCCAGTACCTGCCTCGCTTAGACAAACTGTTGCAGGAGCACGACATTGAGCTGTCTCTTATCACGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CCA 72 bp	CCGTTCAGCTCACCCACCCAGCAGTGCTCATCCTTCTaGGAAATGATCGTGATGATGTCATTTTTGCGGAAG	+
Preference number: 6 (lower is better) Translates to: PFSSPTQQCSSF*EMIVMMSFLRK Trigger: CTTCCGCAAAAATGACATCATCACGATCATTTCCCAGAAGGATGAGCACTGCTGGGTGGGTGAGCTGAACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3
CDS CAA 72 bp	TGTTCATTTAGCCCCACGCAGATAAGTGAGCGGAGCTaGACATCCATTTGTGCGTGTGCTGCATCATGGGTC	+
Preference number: 6 (lower is better) Translates to: CSFSPTQISERS*TSICACAASWV Trigger: GACCCATGATGCAGCACACGCACAAATGGATGTCAAGCTCCGCTCACTTATCTGCGTGGGGCTAAATGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 90 bp	CAGCAGTGCTCATCCTTCTGGGAAATGATCGTGATGATGTCATTTTaGCGGAAGCCTAGCTCATCATCATCGTGCCGCTCAAAGTCCAGC	+
Preference number: 6 (lower is better) Translates to: QQCSSFWEMIVMMSF*RKPSSSSSCRSKSS Trigger: GCTGGACTTTGAGCGGCACGATGATGATGAGCTAGGCTTCCGCAAAAATGACATCATCACGATCATTTCCCAGAAGGATGAGCACTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3
CDS CAA 90 bp	TGTAGGACCTGTTCATTTAGCCCCACGCAGATAAGTGAGCGGAGCTaGACATCCATTTGTGCGTGTGCTGCATCATGGGTCACATTCACA	+
Preference number: 6 (lower is better) Translates to: CRTCSFSPTQISERS*TSICACAASWVTFT Trigger: TGTGAATGTGACCCATGATGCAGCACACGCACAAATGGATGTCAAGCTCCGCTCACTTATCTGCGTGGGGCTAAATGAACAGGTCCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 72 bp	ATAAGAGACAGCTCAATGTCGTGCTCCTGCAACAGTTaGTCTAAGCGAGGCAGGTACTGGACAATCAGGTGG	+
Preference number: 6 (lower is better) Translates to: IRDSSMSCSCNS*SKRGRYWTIRW Trigger: CCACCTGATTGTCCAGTACCTGCCTCGCTTAGACAAACTGTTGCAGGAGCACGACATTGAGCTGTCTCTTAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 72 bp	GCGTCATCCATCTGTGCAGGAATGTCTGACAGCGTGTaGAAGATGGAAGCTGAGTTCTCAGACTGTATCAGC	+
Preference number: 6 (lower is better) Translates to: ASSICAGMSDSV*KMEAEFSDCIS Trigger: GCTGATACAGTCTGAGAACTCAGCTTCCATCTTCAACACGCTGTCAGACATTCCTGCACAGATGGATGACGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9
CDS CAA 72 bp	CTGGCTGCTCTGAGGATTCTTCTTTCTGTGAGTATTTaGCCAGGATCTCCTGGGGCCATATGCTTGGAGTCA	+
Preference number: 6 (lower is better) Translates to: LAALRILLSVSI*PGSPGAICLES Trigger: TGACTCCAAGCATATGGCCCCAGGAGATCCTGGCAAAATACTCACAGAAAGAAGAATCCTCAGAGCAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000137004.2 ENSMUST00000137255.3 ENSMUST00000139517.9 ENSMUST00000228971.2 ENSMUST00000229727.2
CDS CAA 72 bp	TCATCCTTCTGGGAAATGATCGTGATGATGTCATTTTaGCGGAAGCCTAGCTCATCATCATCGTGCCGCTCA	+
Preference number: 6 (lower is better) Translates to: SSFWEMIVMMSF*RKPSSSSSCRS Trigger: TGAGCGGCACGATGATGATGAGCTAGGCTTCCGCAAAAATGACATCATCACGATCATTTCCCAGAAGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124845.9 ENSMUST00000139517.9 ENSMUST00000154904.3

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu