Pregenerated sensors for SGSM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042216Ensembl transcript IDs: ENSMUST00000048112.13, ENSMUST00000057209.12, ENSMUST00000112324.2, ENSMUST00000112325.8, ENSMUST00000154248.8
Found 475 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTCATCAGCCGCCTCCCTTCCTGCTGCCCTGGGCACAAGTGGGCTaGAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: GHQPPPFLLPWAQVG*SSISLPWTLQSSLC Trigger: ACAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGTGCCCAGGGCAGCAGGAAGGGAGGCGGCTGATGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR GCA 90 bp | GACTCTACACAGGCAACTGTGGTCATCAGCCGCCTCCCTTCCTGCTaGCCTGGGCACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGA | + |
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Preference number: 1 (lower is better) Translates to: DSTQATVVISRLPSC*PGHKWAEAASVFHG Trigger: TCCATGGAAGACTGATGCTGCTTCAGCCCACTTGTGCCCAGGGCAGCAGGAAGGGAGGCGGCTGATGACCACAGTTGCCTGTGTAGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR CCA 90 bp | ACTGTGGTCATCAGCCGCCTCCCTTCCTGCTGCCCTGGGCACAAGTaGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: TVVISRLPSCCPGHK*AEAASVFHGHYRAL Trigger: GAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGTGCCCAGGGCAGCAGGAAGGGAGGCGGCTGATGACCACAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR GCA 90 bp | TCTCTTCACAGAAGTCCATACTGGTCCACAGACACCAGGACCTTGTaGTGGGCTGAAGGAAGGGGTGGGGGTGGTGGACGACAGCAGATC | + |
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Preference number: 1 (lower is better) Translates to: SLHRSPYWSTDTRTL*WAEGRGGGGGRQQI Trigger: GATCTGCTGTCGTCCACCACCCCCACCCCTTCCTTCAGCCCAGCACAAGGTCCTGGTGTCTGTGGACCAGTATGGACTTCTGTGAAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR GCA 90 bp | TGTGACTCTACACAGGCAACTGTGGTCATCAGCCGCCTCCCTTCCTaGTGCCCTGGGCACAAGTGGGCTGAAGCAGCATCAGTCTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: CDSTQATVVISRLPS*CPGHKWAEAASVFH Trigger: ATGGAAGACTGATGCTGCTTCAGCCCACTTGTGCCCAGGGCAGCAGGAAGGGAGGCGGCTGATGACCACAGTTGCCTGTGTAGAGTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR CCA 90 bp | GAGGGAACATATTCAGGCCCAACCCTGGCCCCAAGCTCCCCATCATaGAACACAGACCAACCCTATCACTGGCCAACCCACTGGCTCATC | + |
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Preference number: 1 (lower is better) Translates to: EGTYSGPTLAPSSPS*NTDQPYHWPTHWLI Trigger: GATGAGCCAGTGGGTTGGCCAGTGATAGGGTTGGTCTGTGTTCCATGATGGGGAGCTTGGGGCCAGGGTTGGGCCTGAATATGTTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR CCA 90 bp | TGGGTTCTTCTCTACCCCTCTGCCCAGTGGCCAAGGGTAAGAGCATaGCTCTCTTCACAGAAGTCCATACTGGTCCACAGACACCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: WVLLYPSAQWPRVRA*LSSQKSILVHRHQD Trigger: GTCCTGGTGTCTGTGGACCAGTATGGACTTCTGTGAAGAGAGCCATGCTCTTACCCTTGGCCACTGGGCAGAGGGGTAGAGAAGAACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR CCA 90 bp | CTGGCCCCAAGCTCCCCATCATGGAACACAGACCAACCCTATCACTaGCCAACCCACTGGCTCATCCTTCCTTCTGTCCTGAGTGAACAA | + |
|
Preference number: 1 (lower is better) Translates to: LAPSSPSWNTDQPYH*PTHWLILPSVLSEQ Trigger: TTGTTCACTCAGGACAGAAGGAAGGATGAGCCAGTGGGTTGGCCAGTGATAGGGTTGGTCTGTGTTCCATGATGGGGAGCTTGGGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR CCA 90 bp | TCCACCTTGCCCTGTGTGGGAGACACAGGTTCTGATTTAAGAGTGTaGCTCAAGGCTGAAGGTACCCTCTGCAGCTGCTTCAAGCCACGT | + |
|
Preference number: 1 (lower is better) Translates to: STLPCVGDTGSDLRV*LKAEGTLCSCFKPR Trigger: ACGTGGCTTGAAGCAGCTGCAGAGGGTACCTTCAGCCTTGAGCCACACTCTTAAATCAGAACCTGTGTCTCCCACACAGGGCAAGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR GCA 90 bp | CAAACAGGAAAATGTAAGGCCGAGATGGGTTCTTCTCTACCCCTCTaGCCAGTGGCCAAGGGTAAGAGCATGGCTCTCTTCACAGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: QTGKCKAEMGSSLPL*PVAKGKSMALFTEV Trigger: GACTTCTGTGAAGAGAGCCATGCTCTTACCCTTGGCCACTGGGCAGAGGGGTAGAGAAGAACCCATCTCGGCCTTACATTTTCCTGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR CCA 90 bp | GAAAATGTAAGGCCGAGATGGGTTCTTCTCTACCCCTCTGCCCAGTaGCCAAGGGTAAGAGCATGGCTCTCTTCACAGAAGTCCATACTG | + |
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Preference number: 1 (lower is better) Translates to: ENVRPRWVLLYPSAQ*PRVRAWLSSQKSIL Trigger: CAGTATGGACTTCTGTGAAGAGAGCCATGCTCTTACCCTTGGCCACTGGGCAGAGGGGTAGAGAAGAACCCATCTCGGCCTTACATTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR TCA 90 bp | AACCCTATCACTGGCCAACCCACTGGCTCATCCTTCCTTCTGTCCTaGGTGAACAAAGTGCTTAGAGAAAACCCAGCCTTGCTGAGCATG | + |
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Preference number: 1 (lower is better) Translates to: NPITGQPTGSSFLLS*VNKVLRENPALLSM Trigger: CATGCTCAGCAAGGCTGGGTTTTCTCTAAGCACTTTGTTCACTCAGGACAGAAGGAAGGATGAGCCAGTGGGTTGGCCAGTGATAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR CCA 90 bp | GAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTaGTCAGTTACAAAAATAAATAAGGATCAGGAGCTCCGGACCTGG | + |
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Preference number: 1 (lower is better) Translates to: EARGRQREFLCYTPH*SVTKINKDQELRTW Trigger: CCAGGTCCGGAGCTCCTGATCCTTATTTATTTTTGTAACTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR CCA 90 bp | ATGCCTTTTCTAAAGAGAGTCTCCTGGCAGCGGATAGAGAAAAGTTaGAAAGCGCAGGAAGTTAGGTCATTAGATCGAGGACTCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: MPFLKRVSWQRIEKS*KAQEVRSLDRGLRQ Trigger: CTGCCTGAGTCCTCGATCTAATGACCTAACTTCCTGCGCTTTCCAACTTTTCTCTATCCGCTGCCAGGAGACTCTCTTTAGAAAAGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR GCA 90 bp | TCTGATTTAAGAGTGTGGCTCAAGGCTGAAGGTACCCTCTGCAGCTaGTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTGCCATGT | + |
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Preference number: 1 (lower is better) Translates to: SDLRVWLKAEGTLCS*FKPRILFIKSYLPC Trigger: ACATGGCAAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCTTCAGCCTTGAGCCACACTCTTAAATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | ACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGTGTGGCTTTGCGGATaGGGTGGGGCAAGAGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: TTADGRVGLAWIGRGFLGVWLCG*GGARVG Trigger: CCCCACTCTTGCCCCACCCCATCCGCAAAGCCACAC...ACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCCTTGCTGAGCATGGCTTCCACCAAGGCTGCAGGCTTCTGAGCCCAGATACCAGGACCTTGTGCTaGGCTGAAGGAAGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PSLAEHGFHQGCRLLSPDTRTLC*AEGRGG Trigger: CCCACCCCTTCCTTCAGCCCAGCACAAGGTCCTGGT...ATCTGGGCTCAGAAGCCTGCAGCCTTGGTGGAAGCCATGCTCAGCAAGGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR CAA 90 bp | GGCTCTCTTCACAGAAGTCCATACTGGTCCACAGACACCAGGACCTaGTGCTGGGCTGAAGGAAGGGGTGGGGGTGGTGGACGACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GSLHRSPYWSTDTRT*CWAEGRGGGGGRQQ Trigger: CTGCTGTCGTCCACCACCCCCACCCCTTCCTTCAGCCCAGCACAAGGTCCTGGTGTCTGTGGACCAGTATGGACTTCTGTGAAGAGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR GCA 90 bp | CAAGCACGCGCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTGCAGTCAGAAGCTGCTaGCAGGGGCACGGAACAGAC | + |
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Preference number: 2 (lower is better) Translates to: QARAREARGRQREFLCYTAVRSC*QGHGTD Trigger: GTCTGTTCCGTGCCCCTGGCAGCAGCTTCTGACTGC...AGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGCGCGTGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR GCA 90 bp | CATGGACACTACAGAGCTCTCTCTGTCCACCTTGCCCTGTGTGGGAGACACAGGCAGGCAGTCAGAAGCTaGTGCCAGGGGCACGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: HGHYRALSVHLALCGRHRQAVRS*CQGHGT Trigger: TGTTCCGTGCCCCTGGCAGCAGCTTCTGACTGCCTG...CCTGTGTCTCCCACACAGGGCAAGGTGGACAGAGAGAGCTCTGTAGTGTCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | GTCTTGATTGCCCCCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTATTCAGGCCCAACCCTaGCCCCAAGCTCCCCATCAT | + |
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Preference number: 2 (lower is better) Translates to: VLIAPRGCRSWGQASAMCIQAQP*PQAPHH Trigger: ATGATGGGGAGCTTGGGGCCAGGGTTGGGCCTGAAT...ACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAATCAAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR TCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCGACCTTGTGCTGGGCTaGAGGAAGGGGTGGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: INFYLMAFLTHTLGSRGTDLVLG*RKGWGW Trigger: CCACCCCCACCCCTTCCTTCAGCCCAGCACAAGGTC...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR GCA 90 bp | CATGGACACTACAGAGCTCTCTCTGTCCACCTTGCCCTGTGTGGGAGACACAGGTTGCCATGTCTTGATTaGCCCCAGAGGCTGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: HGHYRALSVHLALCGRHRLPCLD*PQRLQV Trigger: GACCTGCAGCCTCTGGGGGCAATCAAGACATGGCAA...CCTGTGTCTCCCACACAGGGCAAGGTGGACAGAGAGAGCTCTGTAGTGTCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGCTCATTTCTGCTAAGGCCCTTCCTTGCTaGGTGCAGAGGAAACCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PEAAGPGDKLLLCVLISAKALPC*VQRKPH Trigger: GTGGGGTTTCCTCTGCACCCAGCAAGGAAGGGCCTT...AGCAGAAATGAGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | CATGGACACTACAGAGCTCTCTCTGTCCACCTTGCCCTGTGTGGGAGACACAGGCACTGGCCAACCCACTaGCTCATCCTTCCTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: HGHYRALSVHLALCGRHRHWPTH*LILPSV Trigger: GACAGAAGGAAGGATGAGCCAGTGGGTTGGCCAGTG...CCTGTGTCTCCCACACAGGGCAAGGTGGACAGAGAGAGCTCTGTAGTGTCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR GCA 90 bp | AGGTCTTGGTATGAAGGTGTAGAGGGAACATATTCAGGCCCAACCCTGGCCCCAGGCTTCCACCAAGGCTaGAGGCTTCTGAGCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: RSWYEGVEGTYSGPTLAPGFHQG*RLLSPD Trigger: ATCTGGGCTCAGAAGCCTGCAGCCTTGGTGGAAGCC...TGGGGCCAGGGTTGGGCCTGAATATGTTCCCTCTACACCTTCATACCAAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | CAAGCACGCGCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTTGTTCCGAGCCAGCCTaGCAGGAACATTCTAGAACA | + |
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Preference number: 2 (lower is better) Translates to: QARAREARGRQREFLCYTCSEPA*QEHSRT Trigger: TGTTCTAGAATGTTCCTGCCAGGCTGGCTCGGAACA...AGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGCGCGTGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGGGGTTACCTTGGGGGTaGGGGGAAACCTGGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: TSGLKQHQSSMDTTELSLGLPWG*GETWWF Trigger: GAACCACCAGGTTTCCCCCCACCCCCAAGGTAACCC...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGAGTGTGGCTCAAGGCTaGAGGTACCCTCTGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: TSGLKQHQSSMDTTELSLSVAQG*RYPLQL Trigger: CAGCTGCAGAGGGTACCTTCAGCCTTGAGCCACACT...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCGGACCTGGCTGTGCTAAAATACCAACCTCTGCACCAGCAAAATCAACTGCAGTCAGAAGCTGCTaGCAGGGGCACGGAACAGAC | + |
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Preference number: 2 (lower is better) Translates to: SSGPGCAKIPTSAPAKSTAVRSC*QGHGTD Trigger: GTCTGTTCCGTGCCCCTGGCAGCAGCTTCTGACTGC...AGTTGATTTTGCTGGTGCAGAGGTTGGTATTTTAGCACAGCCAGGTCCGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR GCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCATTGCCCCCAGAGGCTaGAGGTCCTGGGGACAAGCT | + |
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Preference number: 2 (lower is better) Translates to: INFYLMAFLTHTLGSRGTIAPRG*RSWGQA Trigger: AGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAAT...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCACCAGGACCTTGTGCTaGGCTGAAGGAAGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: INFYLMAFLTHTLGSRGTTRTLC*AEGRGG Trigger: CCCACCCCTTCCTTCAGCCCAGCACAAGGTCCTGGT...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR TCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACGACCTTGTGCTGGGCTaGAGGAAGGGGTGGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: TNLCTSKINFYLMAFLTHDLVLG*RKGWGW Trigger: CCACCCCCACCCCTTCCTTCAGCCCAGCACAAGGTC...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAAATGTAAGGCCGAGATaGGTTCTTCTCTACCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQNVRPR*VLLYPS Trigger: AGAGGGGTAGAGAAGAACCCATCTCGGCCTTACATT...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGCTCATTTCTGCTGGTGAGAAGGATACATaGAGACATGCTGTTAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: PEAAGPGDKLLLCVLISAGEKDT*RHAVSP Trigger: GGGGCTAACAGCATGTCTCCATGTATCCTTCTCACC...AGCAGAAATGAGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGGACCAACCCTATCACTaGCCAACCCACTGGCTCATC | + |
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Preference number: 2 (lower is better) Translates to: TSGLKQHQSSMDTTELSLDQPYH*PTHWLI Trigger: GATGAGCCAGTGGGTTGGCCAGTGATAGGGTTGGTC...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTGGTCAGTGGATCAGCAGGTCTTaGTATGAAGGTGTAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GRHEGGRGNSCAILHTGQWISRS*YEGVEG Trigger: TCCCTCTACACCTTCATACCAAGACCTGCTGATCCA...CTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR TCA 90 bp | CAAGCACGCGCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTTCCTTCTGTCCTGAGTaGACAAAGTGCTTAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: QARAREARGRQREFLCYTSFCPE*TKCLEK Trigger: TTTCTCTAAGCACTTTGTTCACTCAGGACAGAAGGA...AGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGCGCGTGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGATTGCCCCCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTTCCTTCCTTCTGTCCTaGGTGAACAAAGTGCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: VLIAPRGCRSWGQASAMCSFLLS*VNKVLR Trigger: TCTAAGCACTTTGTTCACTCAGGACAGAAGGAAGGA...ACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAATCAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR GCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCTTGCCATGTCTTGATTaGCCCCAGAGGCTGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: INFYLMAFLTHTLGSRGTLPCLD*PQRLQV Trigger: GACCTGCAGCCTCTGGGGGCAATCAAGACATGGCAA...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | GAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCCCTTCCTTGCTGGGGGATATCCCAGACTTaGGCAATCTTTGGTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: EPAWQEHSRTPPKALPCWGISQT*AIFGQT Trigger: TGTTTGACCAAAGATTGCCCAAGTCTGGGATATCCC...CCAGCAAGGAAGGGCCTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGAGCCCAGATCACTGGTaGTGGCAGGGAGGTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SKINFYLMAFLTHTLGSRSPDHW*WQGGLP Trigger: AGGGAGACCTCCCTGCCATCACCAGTGATCTGGGCT...CCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR GCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACCAGGCAGTCAGAAGCTaGTGCCAGGGGCACGGAACA | + |
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Preference number: 2 (lower is better) Translates to: TNLCTSKINFYLMAFLTHQAVRS*CQGHGT Trigger: TGTTCCGTGCCCCTGGCAGCAGCTTCTGACTGCCTG...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGCCAAGGGTAAGAGCATaGCTCTCTTCACAGAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TSGLKQHQSSMDTTELSLPRVRA*LSSQKS Trigger: GGACTTCTGTGAAGAGAGCCATGCTCTTACCCTTGG...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGTTACCTTGGGGGTaGGGGGAAACCTGGTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SKINFYLMAFLTHTLGSRGLPWG*GETWWF Trigger: GAACCACCAGGTTTCCCCCCACCCCCAAGGTAACCC...CCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGCTCAGGGTCAGTGTGTaGATCAGCAGGTCTTGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: TSGLKQHQSSMDTTELSLLRVSV*ISRSWY Trigger: ATACCAAGACCTGCTGATCCACACACTGACCCTGAG...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR GCA 90 bp | AGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGCTTCCACCAAGGCTaGAGGCTTCTGAGCCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SKINFYLMAFLTHTLGSRGFHQG*RLLSPD Trigger: ATCTGGGCTCAGAAGCCTGCAGCCTTGGTGGAAGCC...CCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR GCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCATGTGTGCTCATTTCTaGTGCACCCTGGACTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: INFYLMAFLTHTLGSRGTMCAHF*CTLDCF Trigger: GAAGCAGTCCAGGGTGCAGCAGAAATGAGCACACAT...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCCCAAGCTCCCCATCATaGAACACAGACCAACCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: INFYLMAFLTHTLGSRGTPSSPS*NTDQPY Trigger: ATAGGGTTGGTCTGTGTTCCATGATGGGGAGCTTGG...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACATTCAGGCCCAACCCTaGCCCCAAGCTCCCCATCAT | + |
|
Preference number: 2 (lower is better) Translates to: TNLCTSKINFYLMAFLTHIQAQP*PQAPHH Trigger: ATGATGGGGAGCTTGGGGCCAGGGTTGGGCCTGAAT...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGGCTCACCCTAGGCCTGTCTCCCATTCCTATAGAAACAACTAAAGCCGGAAGAATCCCTGATGGATaGAGAAGGGAATGTCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PGLTLGLSPIPIETTKAGRIPDG*RRECLR Trigger: TCTCAGACATTCCCTTCTCCATCCATCAGGGATTCT...TCCGGCTTTAGTTGTTTCTATAGGAATGGGAGACAGGCCTAGGGTGAGCCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACCTACTTGCCATGTCTTaGTTGCCCCCAGAGGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: TNLCTSKINFYLMAFLTHLLAMS*LPPEAA Trigger: TGCAGCCTCTGGGGGCAATCAAGACATGGCAAGTAG...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR GCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACTCTTCTCTACCCCTCTaGCCAGTGGCCAAGGGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: TNLCTSKINFYLMAFLTHSSLPL*PVAKGK Trigger: CTTACCCTTGGCCACTGGGCAGAGGGGTAGAGAAGA...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGCTCATTTCTGCTGATGCTCAAAACATCTaGGACTTTGAATGTGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PEAAGPGDKLLLCVLISADAQNI*DFECEQ Trigger: TTGCTCACATTCAAAGTCCCAGATGTTTTGAGCATC...AGCAGAAATGAGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACGACCAACCCTATCACTaGCCAACCCACTGGCTCATC | + |
|
Preference number: 2 (lower is better) Translates to: TNLCTSKINFYLMAFLTHDQPYH*PTHWLI Trigger: GATGAGCCAGTGGGTTGGCCAGTGATAGGGTTGGTC...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCCGGATAGAGAAAAGTTaGAAAGCGCAGGAAGTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: INFYLMAFLTHTLGSRGTRIEKS*KAQEVR Trigger: CCTAACTTCCTGCGCTTTCCAACTTTTCTCTATCCG...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR TCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACGGAACAGACCTCAGGTaGGAAGGATACATGGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: TNLCTSKINFYLMAFLTHGTDLR*EGYMET Trigger: TGTCTCCATGTATCCTTCTCACCTGAGGTCTGTTCC...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACCCAAGGGTAAGAGCATaGCTCTCTTCACAGAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TNLCTSKINFYLMAFLTHPRVRA*LSSQKS Trigger: GGACTTCTGTGAAGAGAGCCATGCTCTTACCCTTGG...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR TCA 90 bp | AGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGCAGCAGGTCTTGGTATaGAGGTGTAGAGGGAACATA | + |
|
Preference number: 2 (lower is better) Translates to: SKINFYLMAFLTHTLGSRQQVLV*RCRGNI Trigger: TATGTTCCCTCTACACCTTCATACCAAGACCTGCTG...CCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACATTTCTGCTGCACCCTaGACTGCTTCACTAAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: TNLCTSKINFYLMAFLTHISAAP*TASLRD Trigger: GTCTCTTAGTGAAGCAGTCCAGGGTGCAGCAGAAAT...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CCA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTGGGATATCCCAGACTTaGGCAATCTTTGGTCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: RYPLQLLQATYPLYKILLGISQT*AIFGQT Trigger: TGTTTGACCAAAGATTGCCCAAGTCTGGGATATCCC...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGCGGATAGAGAAAAGTTaGAAAGCGCAGGAAGTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: SKINFYLMAFLTHTLGSRRIEKS*KAQEVR Trigger: CCTAACTTCCTGCGCTTTCCAACTTTTCTCTATCCG...CCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGTGGGTGGGTGTGGCTTaGCGGATGGGGTGGGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: IQTLPPQMGGWGLHGLGGWVGVA*RMGWGK Trigger: CTTGCCCCACCCCATCCGCAAAGCCACACCCACCCA...CCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| 3UTR GCA 72 bp | TCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTaGATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SKPYHRRWEGGA*MDWAGLSGWVW Trigger: CCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| 3UTR CCA 72 bp | AACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATaGATTGGGCGGGGCTTTCTGGGTGGGTGTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: NPTTADGRVGLA*IGRGFLGGCGF Trigger: AAAGCCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| 3UTR TCA 72 bp | TTGCTGAGCATGGCTTCCACCAAGGCTGCAGGCTTCTaGGCCCAGATCACTGGTGATGGCAGGGAGGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLSMASTKAAGF*AQITGDGREVS Trigger: GGAGACCTCCCTGCCATCACCAGTGATCTGGGCTCAGAAGCCTGCAGCCTTGGTGGAAGCCATGCTCAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR TCA 72 bp | ACACCTTGGGAAGCAGGGGGACCTAGCTGGGAGGTGTaGCTCTACACAGGCAACTGTGGTCATCAGCCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TPWEAGGPSWEV*LYTGNCGHQPP Trigger: AGGCGGCTGATGACCACAGTTGCCTGTGTAGAGTCACACCTCCCAGCTAGGTCCCCCTGCTTCCCAAGGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR GCA 72 bp | TGCCCCCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTaGTATGTGTGCTCATTTCTGCTGCACCCTGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: CPQRLQVLGTSF*YVCSFLLHPGL Trigger: CAGTCCAGGGTGCAGCAGAAATGAGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTGGTCAGACCAAAGGCCCTTCCTaGCTGGGTGCAGAGGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: GRHEGGRGNSCAILHTGQTKGPS*LGAEET Trigger: GGTTTCCTCTGCACCCAGCAAGGAAGGGCCTTTGGT...CTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR CCA 72 bp | AGGCCGAGATGGGTTCTTCTCTACCCCTCTGCCCAGTaGCCAAGGGTAAGAGCATGGCTCTCTTCACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RPRWVLLYPSAQ*PRVRAWLSSQK Trigger: CTTCTGTGAAGAGAGCCATGCTCTTACCCTTGGCCACTGGGCAGAGGGGTAGAGAAGAACCCATCTCGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR GCA 72 bp | GTAAGGGTTAGGCTCTCATCAAGAGCTCCTGGCTTCTaGCTACAAACACGTCCAGGACCCCTAGCCCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: VRVRLSSRAPGF*LQTRPGPLAHL Trigger: TAGGTGGGCTAGGGGTCCTGGACGTGTTTGTAGGCAGAAGCCAGGAGCTCTTGATGAGAGCCTAACCCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR CCA 72 bp | CTCTACCCCTCTGCCCAGTGGCCAAGGGTAAGAGCATaGCTCTCTTCACAGAAGTCCATACTGGTCCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LYPSAQWPRVRA*LSSQKSILVHR Trigger: TCTGTGGACCAGTATGGACTTCTGTGAAGAGAGCCATGCTCTTACCCTTGGCCACTGGGCAGAGGGGTAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR CCA 72 bp | AGGGGCACGGAACAGACCTCAGGTGAGAAGGATACATaGAGACATGCTGTTAGCCCCTCTTCCAAGCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RGTEQTSGEKDT*RHAVSPSSKPV Trigger: CACTGGCTTGGAAGAGGGGCTAACAGCATGTCTCCATGTATCCTTCTCACCTGAGGTCTGTTCCGTGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR CCA 72 bp | AGCTCCCCATCATGGAACACAGACCAACCCTATCACTaGCCAACCCACTGGCTCATCCTTCCTTCTGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSPSWNTDQPYH*PTHWLILPSVL Trigger: CAGGACAGAAGGAAGGATGAGCCAGTGGGTTGGCCAGTGATAGGGTTGGTCTGTGTTCCATGATGGGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR CCA 72 bp | TGCCATGTCTTGATTGCCCCCAGAGGCTGCAGGTCCTaGGGACAAGCTTCTGCTATGTGTGCTCATTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CHVLIAPRGCRS*GQASAMCAHFC Trigger: GCAGAAATGAGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAATCAAGACATGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTGGTCAGGGGGATATCCCAGACTaGGGCAATCTTTGGTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GRHEGGRGNSCAILHTGQGDIPD*GNLWSN Trigger: GTTTGACCAAAGATTGCCCAAGTCTGGGATATCCCC...CTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CAA 90 bp | CATGGACACTACAGAGCTCTCTCTGTCCACCTTGCCCTGTGTGGGAGACACAGGGGGGATATCCCAGACTaGGGCAATCTTTGGTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: HGHYRALSVHLALCGRHRGDIPD*GNLWSN Trigger: GTTTGACCAAAGATTGCCCAAGTCTGGGATATCCCC...CCTGTGTCTCCCACACAGGGCAAGGTGGACAGAGAGAGCTCTGTAGTGTCCATG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR GCA 72 bp | AAATGTAAGGCCGAGATGGGTTCTTCTCTACCCCTCTaGCCAGTGGCCAAGGGTAAGAGCATGGCTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KCKAEMGSSLPL*PVAKGKSMALF Trigger: GAAGAGAGCCATGCTCTTACCCTTGGCCACTGGGCAGAGGGGTAGAGAAGAACCCATCTCGGCCTTACATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR GCA 72 bp | AATCCTACTTGCCATGTCTTGATTGCCCCCAGAGGCTaGAGGTCCTGGGGACAAGCTTCTGCTATGTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NPTCHVLIAPRG*RSWGQASAMCA Trigger: AGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAATCAAGACATGGCAAGTAGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR CCA 72 bp | CCCTGTGTGGGAGACACAGGTTCTGATTTAAGAGTGTaGCTCAAGGCTGAAGGTACCCTCTGCAGCTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PCVGDTGSDLRV*LKAEGTLCSCF Trigger: GAAGCAGCTGCAGAGGGTACCTTCAGCCTTGAGCCACACTCTTAAATCAGAACCTGTGTCTCCCACACAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR TCA 72 bp | ACTGGCCAACCCACTGGCTCATCCTTCCTTCTGTCCTaGGTGAACAAAGTGCTTAGAGAAAACCCAGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TGQPTGSSFLLS*VNKVLRENPAL Trigger: CAAGGCTGGGTTTTCTCTAAGCACTTTGTTCACTCAGGACAGAAGGAAGGATGAGCCAGTGGGTTGGCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR TCA 72 bp | ACTCAGGGTCAGTGTGTGGATCAGCAGGTCTTGGTATaGAGGTGTAGAGGGAACATATTCAGGCCCAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: TQGQCVDQQVLV*RCRGNIFRPNP Trigger: AGGGTTGGGCCTGAATATGTTCCCTCTACACCTTCATACCAAGACCTGCTGATCCACACACTGACCCTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR CCA 72 bp | TGGAACACAGACCAACCCTATCACTGGCCAACCCACTaGCTCATCCTTCCTTCTGTCCTGAGTGAACAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: WNTDQPYHWPTH*LILPSVLSEQS Trigger: ACTTTGTTCACTCAGGACAGAAGGAAGGATGAGCCAGTGGGTTGGCCAGTGATAGGGTTGGTCTGTGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR CCA 72 bp | CCCACCTACAGGATGCCTTTTCTAAAGAGAGTCTCCTaGCAGCGGATAGAGAAAAGTTGGAAAGCGCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PTYRMPFLKRVS*QRIEKSWKAQE Trigger: TTCCTGCGCTTTCCAACTTTTCTCTATCCGCTGCCAGGAGACTCTCTTTAGAAAAGGCATCCTGTAGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CAA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTAGAGAAAACCCAGCCTaGCTGAGCATGGCTTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: RYPLQLLQATYPLYKILLRENPA*LSMAST Trigger: GGTGGAAGCCATGCTCAGCAAGGCTGGGTTTTCTCT...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR GCA 72 bp | AGAGTGTGGCTCAAGGCTGAAGGTACCCTCTGCAGCTaGTTCAAGCCACGTATCCTCTTTATAAAATCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: RVWLKAEGTLCS*FKPRILFIKSY Trigger: GTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCTTCAGCCTTGAGCCACACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR GCA 72 bp | GCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTaGTATACTCCACACTGGTCAGTTACAAAAATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: AREARGRQREFL*YTPHWSVTKIN Trigger: ATTTATTTTTGTAACTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR CCA 72 bp | CAACTAAAGCCGGATGTGGGCAGAATCCCTGATGGATaGAGAAGGGAATGTCTGAGAGATACCAAGTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: QLKPDVGRIPDG*RRECLRDTKYS Trigger: AGAGTACTTGGTATCTCTCAGACATTCCCTTCTCCATCCATCAGGGATTCTGCCCACATCCGGCTTTAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| 3UTR CCA 72 bp | CTAAAGAGAGTCTCCTGGCAGCGGATAGAGAAAAGTTaGAAAGCGCAGGAAGTTAGGTCATTAGATCGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LKRVSWQRIEKS*KAQEVRSLDRG Trigger: TCCTCGATCTAATGACCTAACTTCCTGCGCTTTCCAACTTTTCTCTATCCGCTGCCAGGAGACTCTCTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CAA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCAGACTTGGGCAATCTTaGGTCAAACAGGAAAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: INFYLMAFLTHTLGSRGTRLGQS*VKQENV Trigger: TACATTTTCCTGTTTGACCAAAGATTGCCCAAGTCT...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| 3UTR-3UTR CAA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACAAAACATCTGGGACTTaGAATGTGAGCAATGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TNLCTSKINFYLMAFLTHKTSGT*NVSNVY Trigger: GTAGACATTGCTCACATTCAAAGTCCCAGATGTTTT...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | CAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGCCAGGGCAGCCGCGTaGGACTCCCGCTCCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QMGGWGLHGLGGAFWVGVARAAA*DSRSLC Trigger: ACAGAGGGAGCGGGAGTCCCACGCGGCTGCCCTGGC...CACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR TCA 90 bp | CCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTCGGTGCAGCATCCGGTaGAGGTGGCTGTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQMGGWGLHGLGGAFWVGRCSIR*RWLSRL Trigger: CAGCCTGGACAGCCACCTTCACCGGATGCTGCACCG...ACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCAGGTGCCCGCCCTTaGGGAAGCGGAAGGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IQTLPPQMGGWGLHGLGGAGARP*GSGRVA Trigger: GGCCACCCTTCCGCTTCCCCAAGGGCGGGCACCTGC...CCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGCTCCCCTTTCCTCGCTGTaGCCAAAGCGGCGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MGGWGLHGLGGAFWVGVAPLSSL*PKRRVQ Trigger: CTGGACCCGCCGCTTTGGTCACAGCGAGGAAAGGGG...AGCCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR TCA 90 bp | ACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGTCCAGGCTGGCTCCTaGAGAGCACTTGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTADGRVGLAWIGRGFLGVQAGS*RALGQG Trigger: GCCCTGGCCAAGTGCTCTTCAGGAGCCAGCCTGGAC...ACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | AGGGACAGGGAAGTAGGAGGAACCAAGGACTCCTGGGCTCACCCTAGGCCTGTCGCAGGTGCCCGCCCTTaGGGAAGCGGAAGGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RDREVGGTKDSWAHPRPVAGARP*GSGRVA Trigger: GGCCACCCTTCCGCTTCCCCAAGGGCGGGCACCTGC...GACAGGCCTAGGGTGAGCCCAGGAGTCCTTGGTTCCTCCTACTTCCCTGTCCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS-3UTR CCA 90 bp | CCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTAGAGCGCTGGCCGCTTaGTGGGCGAGTCCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQMGGWGLHGLGGAFWVGRALAA*WASPVS Trigger: TGAGACAGGACTCGCCCACCAAGCGGCCAGCGCTCT...ACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR TCA 90 bp | ACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGATCCACAGGTGCTTaGTGGCCAGCGGGGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTADGRVGLAWIGRGFLGGSTGA*WPAGTG Trigger: ACCTGTCCCCGCTGGCCATCAAGCACCTGTGGATCC...ACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGGAGGAAGGGCCACACTaGCCTGCGGATCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPYHRRWEGGACMDWAGEEGPH*PADLRL Trigger: CAGCCTGAGATCCGCAGGGCAGTGTGGCCCTTCCTC...CCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCACGCGCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTGCCAGGGCAGCCGCGTaGGACTCCCGCTCCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QARAREARGRQREFLCYTARAAA*DSRSLC Trigger: ACAGAGGGAGCGGGAGTCCCACGCGGCTGCCCTGGC...AGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGCGCGTGCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | CATACTGGTCCACAGACACCAGGACCTTGTGCTGGGCTGAAGGAAGGGGTGGGGGTCCAGGCTGGCTCCTaGAGAGCACTTGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTGPQTPGPCAGLKEGVGVQAGS*RALGQG Trigger: GCCCTGGCCAAGTGCTCTTCAGGAGCCAGCCTGGAC...CCCCACCCCTTCCTTCAGCCCAGCACAAGGTCCTGGTGTCTGTGGACCAGTATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | TCGAGGACTCAGGCAGTCAGAAGCTGCTGCCAGGGGCACGGAACAGACCTCAGGAGGAACTGTAGCAGGTaGCCGCCCTTGGGGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTQAVRSCCQGHGTDLRRNCSR*PPLGKR Trigger: CCGCTTCCCCAAGGGCGGGCACCTGCTACAGTTCCT...CCTGAGGTCTGTTCCGTGCCCCTGGCAGCAGCTTCTGACTGCCTGAGTCCTCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | GAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCCCTTCCTTGCTGGGCCAGGGCAGCCGCGTaGGACTCCCGCTCCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EPAWQEHSRTPPKALPCWARAAA*DSRSLC Trigger: ACAGAGGGAGCGGGAGTCCCACGCGGCTGCCCTGGC...CCAGCAAGGAAGGGCCTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | AGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGCCTGTGTGCTGCTGCTaGAGTCGCTCTGCAGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RWEGGACMDWAGLSGWVWPVCCC*SRSAVG Trigger: TCCGACTGCAGAGCGACTCCAGCAGCAGCACACAGG...CCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR TCA 90 bp | TCGAGGACTCAGGCAGTCAGAAGCTGCTGCCAGGGGCACGGAACAGACCTCAGGGTGATTGACCAGGGCTaGCAGGTGGGTCCTCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRTQAVRSCCQGHGTDLRVIDQG*QVGPHG Trigger: ACCGTGAGGACCCACCTGTCAGCCCTGGTCAATCAC...CCTGAGGTCTGTTCCGTGCCCCTGGCAGCAGCTTCTGACTGCCTGAGTCCTCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | CCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGCTGCAGCTCTGGGATaGCTCATTGCTGATGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQMGGWGLHGLGGAFWVGAAALG*LIADGG Trigger: TCCACCATCAGCAATGAGTCATCCCAGAGCTGCAGC...ACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | ACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTTCTGGCGGCCTGAGCTaGAGCTCTGGGATGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TTADGRVGLAWIGRGFLGSGGLS*SSGMTH Trigger: ATGAGTCATCCCAGAGCTGCAGCTCAGGCCGCCAGA...ACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | AGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGGCCGGTCGTCCATGCTaGCACTGGAATGCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RWEGGACMDWAGLSGWVWAGRPC*HWNASS Trigger: AGAAGAGGCATTCCAGTGGCAGCATGGACGACCGGC...CCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | AGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGACATCCGCTGTCTGGTaGAGAGACAGGTACCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWEGGACMDWAGLSGWVWTSAVW*RDRYPG Trigger: GCCAGGGTACCTGTCTCTGCACCAGACAGCGGATGT...CCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | ACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTTCACCTGTGTGCTGCTaGTGGAGTCGCTCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TTADGRVGLAWIGRGFLGSPVCC*WSRSAV Trigger: GACTGCAGAGCGACTCCAGCAGCAGCACACAGGTGA...ACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | AGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGCCTTGTCTGAAGACGTaGACTCGGAGGACCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RWEGGACMDWAGLSGWVWPCLKT*TRRTPV Trigger: CACAGGGGTCCTCCGAGTCCACGTCTTCAGACAAGG...CCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | TGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGCTCCTGAAGAGCACTTaGCCAGGGCAGCCGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WTSKPYHRRWEGGACMDWLLKST*PGQPRG Trigger: CCCACGCGGCTGCCCTGGCCAAGTGCTCTTCAGGAG...CCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGAGTTGCTCCAGTTCCTaGACCTTGCGGCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QMGGWGLHGLGGAFWVGVSCSSS*TLRLSS Trigger: GGAGCTGAGCCGCAAGGTCCAGGAACTGGAGCAACT...CACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGCTCTGGAATGCCTCTTCTaGATACAGAGCGCTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: MGGWGLHGLGGAFWVGVALECLF*IQSAGR Trigger: GCGGCCAGCGCTCTGTATCCAGAAGAGGCATTCCAG...AGCCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTAGGAGGAACCAAGGACTCCTGGGCTCACCCTAGGCCTGTCTCCCATTCCCTTTGCCCTGGGCACTaGGAACATGCCTGGGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EVGGTKDSWAHPRPVSHSLCPGH*EHAWGA Trigger: CGCGCCCCAGGCATGTTCCCAGTGCCCAGGGCAAAG...GGAATGGGAGACAGGCCTAGGGTGAGCCCAGGAGTCCTTGGTTCCTCCTACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| 3UTR CAA 72 bp | ATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTaGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IQTLPPQMGGWG*HGLGGAFWVGV Trigger: CACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGAAAGGGGGATACCCCTTTCCTCGCTGTaGCCAAAGCGGCGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQRLPRPTHNPNSQERGIPLSSL*PKRRVQ Trigger: CTGGACCCGCCGCTTTGGTCACAGCGAGGAAAGGGG...TATCCCCCTTTCTTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | TCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGACACGATCATGTGATTaGCCAGGGCTGACAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPYHRRWEGGACMDWAGTRSCD*PGLTGG Trigger: CCCACCTGTCAGCCCTGGTCAATCACATGATCGTGT...CCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR TCA 90 bp | TACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGGGAGACACGATCATGTaGTTGACCAGGGCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: YHRRWEGGACMDWAGLSGGDTIM*LTRADR Trigger: CCTGTCAGCCCTGGTCAATCACATGATCGTGTCTCC...CCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCCCTTCCTTGCTGGCGGTGCAGCATCCGGTaGAGGTGGCTGTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPAWQEHSRTPPKALPCWRCSIR*RWLSRL Trigger: CAGCCTGGACAGCCACCTTCACCGGATGCTGCACCG...CCAGCAAGGAAGGGCCTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | CATGGACACTACAGAGCTCTCTCTGTCCACCTTGCCCTGTGTGGGAGACACAGGGGGTCCAGCTGCCCGTaGGGAAGCAGCCCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HGHYRALSVHLALCGRHRGSSCP*GSSPFS Trigger: GGAGAATGGGCTGCTTCCGCACGGGCAGCTGGACCC...CCTGTGTCTCCCACACAGGGCAAGGTGGACAGAGAGAGCTCTGTAGTGTCCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | CAAGCACGCGCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCTGGCTGTCAACCCTTaGCCAGCGTCACAGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QARAREARGRQREFLCYTLAVNP*PASQGR Trigger: CCTGCCCTGTGACGCTGGGCAAGGGTTGACAGCCAG...AGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGCGCGTGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | TGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGCTGCTGGAGTCGCTCTaGAGTCGGAGGTTCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WTSKPYHRRWEGGACMDWLLESL*SRRFWR Trigger: CCGCCAGAACCTCCGACTGCAGAGCGACTCCAGCAG...CCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | CATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGATGGCCGGTCGTCCATaGTGCCACTGGAATGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPNPTTADGRVGLAWIGRMAGRP*CHWNAS Trigger: AGAGGCATTCCAGTGGCAGCATGGACGACCGGCCAT...CCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | AGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGAAGTCACCTGTGTGCTaGTGCTGGAGTCGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RWEGGACMDWAGLSGWVWKSPVC*CWSRSA Trigger: TGCAGAGCGACTCCAGCAGCAGCACACAGGTGACTT...CCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | CCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTCCTGAGCTGCAGCTCTaGGATGACTCATTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PQMGGWGLHGLGGAFWVGPELQL*DDSLLM Trigger: CATCAGCAATGAGTCATCCCAGAGCTGCAGCTCAGG...ACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGTTCTTCTCTACCCCTCTGCCCAGTGGCCAAGGGTAAGAGCATGGCTCTCCCTCGTCCCGGGATGTaGTGGCTTCGCTGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MGSSLPLCPVAKGKSMALPRPGM*WLRCSA Trigger: GGCAGAGCAGCGAAGCCACCACATCCCGGGACGAGG...GAGAGCCATGCTCTTACCCTTGGCCACTGGGCAGAGGGGTAGAGAAGAACCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | TGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGCCGGGCAGAGATAGATaGCCGGTCGTCCATGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WTSKPYHRRWEGGACMDWPGRDR*PVVHAA Trigger: GGCAGCATGGACGACCGGCCATCTATCTCTGCCCGG...CCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | ACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGATGACATCCGCTGTCTaGTGCAGAGACAGGTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: TADGRVGLAWIGRGFLGGMTSAV*CRDRYP Trigger: AGGGTACCTGTCTCTGCACCAGACAGCGGATGTCAT...CCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR TCA 90 bp | TGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGTGATTGACCAGGGCTaGCAGGTGGGTCCTCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: WTSKPYHRRWEGGACMDWVIDQG*QVGPHG Trigger: ACCGTGAGGACCCACCTGTCAGCCCTGGTCAATCAC...CCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGCTCATTTCTGCTGTCCAGGCTGGCTCCTaGAGAGCACTTGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PEAAGPGDKLLLCVLISAVQAGS*RALGQG Trigger: GCCCTGGCCAAGTGCTCTTCAGGAGCCAGCCTGGAC...AGCAGAAATGAGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGCTCATTTCTGCTCGGTGCAGCATCCGGTaGAGGTGGCTGTCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PEAAGPGDKLLLCVLISARCSIR*RWLSRL Trigger: CAGCCTGGACAGCCACCTTCACCGGATGCTGCACCG...AGCAGAAATGAGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | AGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGGACCCGTTCATCAGCTaGTTGGGTGTCCACTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RWEGGACMDWAGLSGWVWDPFIS*LGVHFK Trigger: CTTGAAGTGGACACCCAATCAGCTGATGAACGGGTC...CCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | GGGACAGCCTGTTCCGAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGAGGAACTGTAGCAGGTaGCCGCCCTTGGGGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GTACSEPAWQEHSRTPPKRNCSR*PPLGKR Trigger: CCGCTTCCCCAAGGGCGGGCACCTGCTACAGTTCCT...CTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTCGGAACAGGCTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | ATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGTTCCGAGGACTGGGTTaGCATAGGGGTGGAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IQTLPPQMGGWGLHGLGGFRGLG*HRGGRL Trigger: CAACCTTCCACCCCTATGGCAACCCAGTCCTCGGAA...CCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTGGTCAGGAGGAAGGGCCACACTaGCCTGCGGATCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRHEGGRGNSCAILHTGQEEGPH*PADLRL Trigger: CAGCCTGAGATCCGCAGGGCAGTGTGGCCCTTCCTC...CTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | GGGACAGCCTGTTCCGAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGCTGCTGGAGTCGCTCTaGAGTCGGAGGTTCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GTACSEPAWQEHSRTPPKLLESL*SRRFWR Trigger: CCGCCAGAACCTCCGACTGCAGAGCGACTCCAGCAG...CTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTCGGAACAGGCTGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCTTGCTGAGCATGGCTTCCACCAAGGCTGCAGGCTTCTGAGCCCAGATCCTTGTCTGAAGACGTaGACTCGGAGGACCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLAEHGFHQGCRLLSPDPCLKT*TRRTPV Trigger: CACAGGGGTCCTCCGAGTCCACGTCTTCAGACAAGG...ATCTGGGCTCAGAAGCCTGCAGCCTTGGTGGAAGCCATGCTCAGCAAGGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | AGGGACAGGGAAGTAGGAGGAACCAAGGACTCCTGGGCTCACCCTAGGCCTGTCCCTTGTCTGAAGACGTaGACTCGGAGGACCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDREVGGTKDSWAHPRPVPCLKT*TRRTPV Trigger: CACAGGGGTCCTCCGAGTCCACGTCTTCAGACAAGG...GACAGGCCTAGGGTGAGCCCAGGAGTCCTTGGTTCCTCCTACTTCCCTGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGCTCATTTCTGCTCTCCTGAAGAGCACTTaGCCAGGGCAGCCGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PEAAGPGDKLLLCVLISALLKST*PGQPRG Trigger: CCCACGCGGCTGCCCTGGCCAAGTGCTCTTCAGGAG...AGCAGAAATGAGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | GAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCCCTTCCTTGCTGGAGGGTGTCCGGAGTCTaGGGAGCAAGTGCCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EPAWQEHSRTPPKALPCWRVSGV*GASAVG Trigger: GCCAACGGCACTTGCTCCCCAGACTCCGGACACCCT...CCAGCAAGGAAGGGCCTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | GTCTTGATTGCCCCCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTAGGGTGTCCGGAGTCTaGGGAGCAAGTGCCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLIAPRGCRSWGQASAMCRVSGV*GASAVG Trigger: GCCAACGGCACTTGCTCCCCAGACTCCGGACACCCT...ACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAATCAAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | AGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGAAAGGGGGATACGTCCCGGGATGTGGTaGCTTCGCTGCTCTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQRLPRPTHNPNSQERGIRPGMW*LRCSAH Trigger: ATGGGCAGAGCAGCGAAGCCACCACATCCCGGGACG...TATCCCCCTTTCTTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAAGAGCGCTGGCCGCTTaGTGGGCGAGTCCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQRALAA*WASPVS Trigger: TGAGACAGGACTCGCCCACCAAGCGGCCAGCGCTCT...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR CCA 90 bp | GAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCCCTTCCTTGCTGGCCGGGCAGAGATAGATaGCCGGTCGTCCATGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EPAWQEHSRTPPKALPCWPGRDR*PVVHAA Trigger: GGCAGCATGGACGACCGGCCATCTATCTCTGCCCGG...CCAGCAAGGAAGGGCCTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR TCA 90 bp | TGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGCCGCACAGAAGGAGATaGTGTGGCTGCTGTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WTSKPYHRRWEGGACMDWPHRRR*CGCCPR Trigger: ACGAGGACAGCAGCCACATCATCTCCTTCTGTGCGG...CCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCACGCGCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCGGTGGACAGGTGTCTaGAGTAGGCGAGCCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QARAREARGRQREFLCYTRWTGV*SRRAIH Trigger: ATGGATGGCTCGCCTACTGCAGACACCTGTCCACCG...AGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGCGCGTGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | CATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGCTCCGACATGGTTTGTaGGTAGCAGGCATGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPNPTTADGRVGLAWIGRLRHGL*VAGMDL Trigger: CAGATCCATGCCTGCTACGCACAAACCATGTCGGAG...CCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCACGCGCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTTCTGGCGGCCTGAGCTaGAGCTCTGGGATGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QARAREARGRQREFLCYTSGGLS*SSGMTH Trigger: ATGAGTCATCCCAGAGCTGCAGCTCAGGCCGCCAGA...AGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGCGCGTGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCTTGCTGAGCATGGCTTCCACCAAGGCTGCAGGCTTCTGAGCCCAGATCTCATGTTGGCGAAGTaGGTATCCATGGCGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLAEHGFHQGCRLLSPDLMLAK*VSMAPP Trigger: TGGAGGCGCCATGGATACGCACTTCGCCAACATGAG...ATCTGGGCTCAGAAGCCTGCAGCCTTGGTGGAAGCCATGCTCAGCAAGGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | CATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGCGCTCTCAATGAGTTaGTCCAGTTCCTGGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPNPTTADGRVGLAWIGRALSMS*SSSWTL Trigger: CAAGGTCCAGGAACTGGAGCAACTCATTGAGAGCGC...CCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | AGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGATGCTGCCACTGGAATaGCTCTTCTGGATACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RWEGGACMDWAGLSGWVWMLPLE*LFWIQS Trigger: GCTCTGTATCCAGAAGAGGCATTCCAGTGGCAGCAT...CCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGTCAAAGCAGGTGCCCGCCCTTaGGGAAGCGGAAGGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPTPKKGGYPRLGQSLVKAGARP*GSGRVA Trigger: GGCCACCCTTCCGCTTCCCCAAGGGCGGGCACCTGC...TTTGACCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | ATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGAGTGGGGCCCTCTCATaGTTACAGCCATTGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IQTLPPQMGGWGLHGLGGSGALS*LQPLVE Trigger: CTCAACCAATGGCTGTAACCATGAGAGGGCCCCACT...CCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGACACAGCAGTTTCAGTaGGGCCCTCTCATGGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SKPYHRRWEGGACMDWAGTQQFQ*GPLMVT Trigger: TGTAACCATGAGAGGGCCCCACTGAAACTGCTGTGT...CCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGATTTTTCCCAGATGCTaGCTGTCAACCCTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKPYHRRWEGGACMDWAGIFPRC*LSTLAQ Trigger: CTGGGCAAGGGTTGACAGCCAGCATCTGGGAAAAAT...CCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGTTCTTCTCTACCCCTCTGCCCAGTGGCCAAGGGTAAGAGCATGGCTCTCCCTGTGTGCTGCTGCTaGAGTCGCTCTGCAGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: MGSSLPLCPVAKGKSMALPVCCC*SRSAVG Trigger: TCCGACTGCAGAGCGACTCCAGCAGCAGCACACAGG...GAGAGCCATGCTCTTACCCTTGGCCACTGGGCAGAGGGGTAGAGAAGAACCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | GTCTTGATTGCCCCCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGGGAGCAAGTGCCGTTaGCTGGGTTCCCATTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLIAPRGCRSWGQASAMCGSKCR*LGSHWG Trigger: TCCCCAATGGGAACCCAGCCAACGGCACTTGCTCCC...ACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAATCAAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTGGTATGAAGGTGTAGAGGGAACATATTCAGGCCCAACCCTGGCCCCACCTCGTCCCGGGATGTaGTGGCTTCGCTGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSWYEGVEGTYSGPTLAPPRPGM*WLRCSA Trigger: GGCAGAGCAGCGAAGCCACCACATCCCGGGACGAGG...TGGGGCCAGGGTTGGGCCTGAATATGTTCCCTCTACACCTTCATACCAAGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGCCCCTTTCCTCGCTGTaGCCAAAGCGGCGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSGLKQHQSSMDTTELSLPLSSL*PKRRVQ Trigger: CTGGACCCGCCGCTTTGGTCACAGCGAGGAAAGGGG...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | ACCCTAGGCCTGTCTCCCATTCCTATAGAAACAACTAAAGCCGGATGTGGGCAGCCCCTTTCCTCGCTGTaGCCAAAGCGGCGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLGLSPIPIETTKAGCGQPLSSL*PKRRVQ Trigger: CTGGACCCGCCGCTTTGGTCACAGCGAGGAAAGGGG...CTGCCCACATCCGGCTTTAGTTGTTTCTATAGGAATGGGAGACAGGCCTAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGCGTGCCAGGGTAGATaGTGCGGAACACGTAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQACQGR*CGTRNP Trigger: CGGATTACGTGTTCCGCATCATCTACCCTGGCACGC...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | CAAGCACGCGCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTACACGATCATGTGATTaGCCAGGGCTGACAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QARAREARGRQREFLCYTTRSCD*PGLTGG Trigger: CCCACCTGTCAGCCCTGGTCAATCACATGATCGTGT...AGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGCGCGTGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | AGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGAAAGGGGGATACCAGGTTGGCTGCTGTaGAGTACCAGTAGCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQRLPRPTHNPNSQERGIPGWLL*STSSCG Trigger: ACCGCAGCTACTGGTACTTCACAGCAGCCAACCTGG...TATCCCCCTTTCTTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | CCAAGGACTCCTGGGCTCACCCTAGGCCTGTCTCCCATTCCTATAGAAACAACTAGGAACTGTAGCAGGTaGCCGCCCTTGGGGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PRTPGLTLGLSPIPIETTRNCSR*PPLGKR Trigger: CCGCTTCCCCAAGGGCGGGCACCTGCTACAGTTCCT...AGTTGTTTCTATAGGAATGGGAGACAGGCCTAGGGTGAGCCCAGGAGTCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS-3UTR GCA 90 bp | ATAAATGATGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCAAGGAACTGTAGCAGGTaGCCGCCCTTGGGGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: INDGHPNPTTADGRVGLARNCSR*PPLGKR Trigger: CCGCTTCCCCAAGGGCGGGCACCTGCTACAGTTCCT...TGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCATCATTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCTTGGTATGAAGGTGTAGAGGGAACATATTCAGGCCCAACCCTGGCCCCACTGCTGGAGTCGCTCTaGAGTCGGAGGTTCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSWYEGVEGTYSGPTLAPLLESL*SRRFWR Trigger: CCGCCAGAACCTCCGACTGCAGAGCGACTCCAGCAG...TGGGGCCAGGGTTGGGCCTGAATATGTTCCCTCTACACCTTCATACCAAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | CAAGCACGCGCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCTTCTGCCTCTGTCTaGTCCACCTCATCCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QARAREARGRQREFLCYTPSASV*STSSTD Trigger: GTCTGTGGATGAGGTGGAGCAGACAGAGGCAGAAGG...AGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGCGCGTGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | CATGGACACTACAGAGCTCTCTCTGTCCACCTTGCCCTGTGTGGGAGACACAGGCTCTCAAGGCTATCTTaGACGGCCAGCTCCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HGHYRALSVHLALCGRHRLSRLS*TASSSR Trigger: TCGGGAGGAGCTGGCCGTGCAAGATAGCCTTGAGAG...CCTGTGTCTCCCACACAGGGCAAGGTGGACAGAGAGAGCTCTGTAGTGTCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | TCGAGGACTCAGGCAGTCAGAAGCTGCTGCCAGGGGCACGGAACAGACCTCAGGGCACATCTTTCTCAATaGGGTGCAGGTTCACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRTQAVRSCCQGHGTDLRAHLSQ*GAGSRC Trigger: ACACCGTGAACCTGCACCGCATTGAGAAAGATGTGC...CCTGAGGTCTGTTCCGTGCCCCTGGCAGCAGCTTCTGACTGCCTGAGTCCTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | ATAAATGATGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCAGTGCGGATCCACAGGTaGTTGATGGCCAGCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: INDGHPNPTTADGRVGLAVRIHR*LMASGD Trigger: GTCCCCGCTGGCCATCAAGCACCTGTGGATCCGCAC...TGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCATCATTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTGATTGCCCCCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTATGGCCGGTCGTCCATaGTGCCACTGGAATGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLIAPRGCRSWGQASAMCMAGRP*CHWNAS Trigger: AGAGGCATTCCAGTGGCAGCATGGACGACCGGCCAT...ACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAATCAAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR GCA 90 bp | AGGGACAGGGAAGTAGGAGGAACCAAGGACTCCTGGGCTCACCCTAGGCCTGTCGCAGGATGGGGGATGTaGACTCACATCCATAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RDREVGGTKDSWAHPRPVAGWGM*THIHRR Trigger: CCTTCTATGGATGTGAGTGCACATCCCCCATCCTGC...GACAGGCCTAGGGTGAGCCCAGGAGTCCTTGGTTCCTCCTACTTCCCTGTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAACCTTGTCTGAAGACGTaGACTCGGAGGACCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQPCLKT*TRRTPV Trigger: CACAGGGGTCCTCCGAGTCCACGTCTTCAGACAAGG...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | CCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGCTCTGGAGAGGATCTaGTACTTCATGTTATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PQMGGWGLHGLGGAFWVGALERI*YFMLSH Trigger: GTGTGATAACATGAAGTACCAGATCCTCTCCAGAGC...ACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGTCACAGGGCAGGTCTaGAGACACGATCATGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: IQTLPPQMGGWGLHGLGGVTGQV*RHDHVI Trigger: AATCACATGATCGTGTCTCCAGACCTGCCCTGTGAC...CCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | TCGAGGACTCAGGCAGTCAGAAGCTGCTGCCAGGGGCACGGAACAGACCTCAGGATTTTTCCCAGATGCTaGCTGTCAACCCTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTQAVRSCCQGHGTDLRIFPRC*LSTLAQ Trigger: CTGGGCAAGGGTTGACAGCCAGCATCTGGGAAAAAT...CCTGAGGTCTGTTCCGTGCCCCTGGCAGCAGCTTCTGACTGCCTGAGTCCTCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGCTCCTGAAGAGCACTTaGCCAGGGCAGCCGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSGLKQHQSSMDTTELSLLLKST*PGQPRG Trigger: CCCACGCGGCTGCCCTGGCCAAGTGCTCTTCAGGAG...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | CATACTGGTCCACAGACACCAGGACCTTGTGCTGGGCTGAAGGAAGGGGTGGGGCCTGAGCTGCAGCTCTaGGATGACTCATTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HTGPQTPGPCAGLKEGVGPELQL*DDSLLM Trigger: CATCAGCAATGAGTCATCCCAGAGCTGCAGCTCAGG...CCCCACCCCTTCCTTCAGCCCAGCACAAGGTCCTGGTGTCTGTGGACCAGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTTGCTGAGCATGGCTTCCACCAAGGCTGCAGGCTTCTGAGCCCAGATGCAAGTGCCGTTGGCTaGGTTCCCATTGGGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLAEHGFHQGCRLLSPDASAVG*VPIGDF Trigger: AAAATCCCCAATGGGAACCCAGCCAACGGCACTTGC...ATCTGGGCTCAGAAGCCTGCAGCCTTGGTGGAAGCCATGCTCAGCAAGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | GGGACAGCCTGTTCCGAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCTGGAAGGCTGCGTTaGGCATCCAAGACGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTACSEPAWQEHSRTPPKAGRLR*ASKTLS Trigger: AGACAGCGTCTTGGATGCCCAACGCAGCCTTCCAGC...CTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTCGGAACAGGCTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | ACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTCTGCAGTCTTCATCTTaGTATACTCCAGGGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: TTADGRVGLAWIGRGFLGLQSSS*YTPGHM Trigger: CATGTGCCCTGGAGTATACCAAGATGAAGACTGCAG...ACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS-3UTR CCA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAACTGGAATGCCTCTTCTaGATACAGAGCGCTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQLECLF*IQSAGR Trigger: GCGGCCAGCGCTCTGTATCCAGAAGAGGCATTCCAG...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
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| CDS-3UTR CCA 90 bp | TGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGAGAGCAGGGTGGCCCTaGAGTTCTGGTGCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: WTSKPYHRRWEGGACMDWRAGWP*SSGAEI Trigger: AATCTCTGCACCAGAACTCCAGGGCCACCCTGCTCT...CCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS-3UTR CCA 90 bp | AGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGAAAGGGGGATACAGAGACAGGTACCCTaGCACGGCCTCCATGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SQRLPRPTHNPNSQERGIQRQVP*HGLHVI Trigger: GATGACATGGAGGCCGTGCCAGGGTACCTGTCTCTG...TATCCCCCTTTCTTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR CCA 90 bp | CATACTGGTCCACAGACACCAGGACCTTGTGCTGGGCTGAAGGAAGGGGTGGGGATGACATCCGCTGTCTaGTGCAGAGACAGGTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTGPQTPGPCAGLKEGVGMTSAV*CRDRYP Trigger: AGGGTACCTGTCTCTGCACCAGACAGCGGATGTCAT...CCCCACCCCTTCCTTCAGCCCAGCACAAGGTCCTGGTGTCTGTGGACCAGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR CCA 90 bp | GGAGGAACCAAGGACTCCTGGGCTCACCCTAGGCCTGTCTCCCATTCCTATAGACACTGGGAACATGCCTaGGGCGCGAGGCACTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GGTKDSWAHPRPVSHSYRHWEHA*GARHLI Trigger: TATCAAGTGCCTCGCGCCCCAGGCATGTTCCCAGTG...TCTATAGGAATGGGAGACAGGCCTAGGGTGAGCCCAGGAGTCCTTGGTTCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS-3UTR TCA 90 bp | GGGACAGCCTGTTCCGAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGACACGATCATGTGATTaGCCAGGGCTGACAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTACSEPAWQEHSRTPPKTRSCD*PGLTGG Trigger: CCCACCTGTCAGCCCTGGTCAATCACATGATCGTGT...CTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTCGGAACAGGCTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGGAGACACGATCATGTaGTTGACCAGGGCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQGDTIM*LTRADR Trigger: CCTGTCAGCCCTGGTCAATCACATGATCGTGTCTCC...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | CATGGACACTACAGAGCTCTCTCTGTCCACCTTGCCCTGTGTGGGAGACACAGGGCTGCAGCTCTGGGATaGCTCATTGCTGATGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGHYRALSVHLALCGRHRAAALG*LIADGG Trigger: TCCACCATCAGCAATGAGTCATCCCAGAGCTGCAGC...CCTGTGTCTCCCACACAGGGCAAGGTGGACAGAGAGAGCTCTGTAGTGTCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR TCA 90 bp | CCCAGCCTTGCTGAGCATGGCTTCCACCAAGGCTGCAGGCTTCTGAGCCCAGATGGGATGTTTTTCTTCTaGCCTGCCTTCTGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLAEHGFHQGCRLLSPDGMFFF*PAFCLC Trigger: ACAGAGGCAGAAGGCAGGTCAGAAGAAAAACATCCC...ATCTGGGCTCAGAAGCCTGCAGCCTTGGTGGAAGCCATGCTCAGCAAGGCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGGGATCCACAGGTGCTTaGTGGCCAGCGGGGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSGLKQHQSSMDTTELSLGSTGA*WPAGTG Trigger: ACCTGTCCCCGCTGGCCATCAAGCACCTGTGGATCC...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR GCA 90 bp | GGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTGGTCAGTTCCGAGGACTGGGTTaGCATAGGGGTGGAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRHEGGRGNSCAILHTGQFRGLG*HRGGRL Trigger: CAACCTTCCACCCCTATGGCAACCCAGTCCTCGGAA...CTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR GCA 90 bp | GTAGGAGGAACCAAGGACTCCTGGGCTCACCCTAGGCCTGTCTCCCATTCCTATTTCCGAGGACTGGGTTaGCATAGGGGTGGAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGGTKDSWAHPRPVSHSYFRGLG*HRGGRL Trigger: CAACCTTCCACCCCTATGGCAACCCAGTCCTCGGAA...ATAGGAATGGGAGACAGGCCTAGGGTGAGCCCAGGAGTCCTTGGTTCCTCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS-3UTR GCA 90 bp | TCACAACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGGAGGAAGGGCCACACTaGCCTGCGGATCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQPQLPRKGDIPDLGNLWEEGPH*PADLRL Trigger: CAGCCTGAGATCCGCAGGGCAGTGTGGCCCTTCCTC...CCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGTTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR GCA 90 bp | GTCTTGATTGCCCCCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTATACCTGTGTGCTGCTaGTGGAGTCGCTCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLIAPRGCRSWGQASAMCIPVCC*WSRSAV Trigger: GACTGCAGAGCGACTCCAGCAGCAGCACACAGGTAT...ACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAATCAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | TCGAGGACTCAGGCAGTCAGAAGCTGCTGCCAGGGGCACGGAACAGACCTCAGGGTTTTTCTTCTGACCTaGCTTCTGCCTCTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRTQAVRSCCQGHGTDLRVFLLT*LLPLSA Trigger: AGCAGACAGAGGCAGAAGGCAGGTCAGAAGAAAAAC...CCTGAGGTCTGTTCCGTGCCCCTGGCAGCAGCTTCTGACTGCCTGAGTCCTCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR GCA 90 bp | AGGTCTTGGTATGAAGGTGTAGAGGGAACATATTCAGGCCCAACCCTGGCCCCAGTGGCTTCGCTGCTCTaGCCATCTTCCACGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSWYEGVEGTYSGPTLAPVASLL*PSSTLL Trigger: CAGCAGCGTGGAAGATGGGCAGAGCAGCGAAGCCAC...TGGGGCCAGGGTTGGGCCTGAATATGTTCCCTCTACACCTTCATACCAAGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR GCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGGTGCGGATCCACAGGTaGTTGATGGCCAGCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSGLKQHQSSMDTTELSLVRIHR*LMASGD Trigger: GTCCCCGCTGGCCATCAAGCACCTGTGGATCCGCAC...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
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| CDS-3UTR GCA 90 bp | ATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGCGGGTCCATCAAGAGTaGCTCCTTCTCGTAGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: IQTLPPQMGGWGLHGLGGRVHQE*LLLVVF Trigger: AAATACTACGAGAAGGAGGCACTCTTGATGGACCCG...CCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS-3UTR GCA 90 bp | ACCCTAGGCCTGTCTCCCATTCCTATAGAAACAACTAAAGCCGGATGTGGGCAGTGGGCACTGGGAACATaGCTGGGGCGCGAGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TLGLSPIPIETTKAGCGQWALGT*LGREAL Trigger: AAGTGCCTCGCGCCCCAGGCATGTTCCCAGTGCCCA...CTGCCCACATCCGGCTTTAGTTGTTTCTATAGGAATGGGAGACAGGCCTAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS-3UTR CCA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAACTCTGGATTCCATCCTaGCTCACCAGCACGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQLWIPS*LTSTTV Trigger: GACTGTCGTGCTGGTGAGCCAGGATGGAATCCAGAG...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | CCAAGGACTCCTGGGCTCACCCTAGGCCTGTCTCCCATTCCTATAGAAACAACTGGGGAAGCGGAAGGGTaGCCTCTGGATTCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRTPGLTLGLSPIPIETTGEAEG*PLDSIL Trigger: CAGGATGGAATCCAGAGGCCACCCTTCCGCTTCCCC...AGTTGTTTCTATAGGAATGGGAGACAGGCCTAGGGTGAGCCCAGGAGTCCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS-3UTR CCA 90 bp | ATAAATGATGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCAGGGGAAGCGGAAGGGTaGCCTCTGGATTCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: INDGHPNPTTADGRVGLAGEAEG*PLDSIL Trigger: CAGGATGGAATCCAGAGGCCACCCTTCCGCTTCCCC...TGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCATCATTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS-3UTR CCA 90 bp | CCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGCTCATTTCTGCTAGTTGCTCCAGTTCCTaGACCTTGCGGCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PEAAGPGDKLLLCVLISASCSSS*TLRLSS Trigger: GGAGCTGAGCCGCAAGGTCCAGGAACTGGAGCAACT...AGCAGAAATGAGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
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| CDS-3UTR CCA 90 bp | GTCTTGATTGCCCCCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTAGAGCAGGGTGGCCCTaGAGTTCTGGTGCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VLIAPRGCRSWGQASAMCRAGWP*SSGAEI Trigger: AATCTCTGCACCAGAACTCCAGGGCCACCCTGCTCT...ACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAATCAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
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| CDS-3UTR TCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGGTGATTGACCAGGGCTaGCAGGTGGGTCCTCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSGLKQHQSSMDTTELSLVIDQG*QVGPHG Trigger: ACCGTGAGGACCCACCTGTCAGCCCTGGTCAATCAC...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR TCA 90 bp | GAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCCCTTCCTTGCTGGGTTCTGGAGAATAGGTaGCTCCACTGGAGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: EPAWQEHSRTPPKALPCWVLENR*LHWRTQ Trigger: CTGTGTCCTCCAGTGGAGTCACCTATTCTCCAGAAC...CCAGCAAGGAAGGGCCTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR TCA 90 bp | GAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCCCTTCCTTGCTGGGACCCGTTCATCAGCTaGTTGGGTGTCCACTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EPAWQEHSRTPPKALPCWDPFIS*LGVHFK Trigger: CTTGAAGTGGACACCCAATCAGCTGATGAACGGGTC...CCAGCAAGGAAGGGCCTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
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| CDS-3UTR GCA 90 bp | GGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTGGTCAGCTCCGACATGGTTTGTaGGTAGCAGGCATGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRHEGGRGNSCAILHTGQLRHGL*VAGMDL Trigger: CAGATCCATGCCTGCTACGCACAAACCATGTCGGAG...CTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR GCA 90 bp | GAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCCCTTCCTTGCTGGCTCCGACATGGTTTGTaGGTAGCAGGCATGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPAWQEHSRTPPKALPCWLRHGL*VAGMDL Trigger: CAGATCCATGCCTGCTACGCACAAACCATGTCGGAG...CCAGCAAGGAAGGGCCTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR GCA 90 bp | AGGTCTTGGTATGAAGGTGTAGAGGGAACATATTCAGGCCCAACCCTGGCCCCATCTGGCGGCCTGAGCTaGAGCTCTGGGATGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSWYEGVEGTYSGPTLAPSGGLS*SSGMTH Trigger: ATGAGTCATCCCAGAGCTGCAGCTCAGGCCGCCAGA...TGGGGCCAGGGTTGGGCCTGAATATGTTCCCTCTACACCTTCATACCAAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR GCA 90 bp | GAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCCCTTCCTTGCTGGCAAATACCTGTGTGCTaGTGCTGGAGTCGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPAWQEHSRTPPKALPCWQIPVC*CWSRSA Trigger: TGCAGAGCGACTCCAGCAGCAGCACACAGGTATTTG...CCAGCAAGGAAGGGCCTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR GCA 90 bp | GGGACAGCCTGTTCCGAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGCTGCGGTCACACCTCTaGACATCTTTCTCAATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GTACSEPAWQEHSRTPPKLRSHL*TSFSMR Trigger: CCGCATTGAGAAAGATGTGCAGAGGTGTGACCGCAG...CTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTCGGAACAGGCTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR GCA 90 bp | GGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTGGTCAGCTGCGGTCACACCTCTaGACATCTTTCTCAATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GRHEGGRGNSCAILHTGQLRSHL*TSFSMR Trigger: CCGCATTGAGAAAGATGTGCAGAGGTGTGACCGCAG...CTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAATCTGCTTGGCGTTGTaGCGCTCAGCCATTTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQICLAL*RSAISL Trigger: CAACGAAATGGCTGAGCGGCACAACGCCAAGCAGAT...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | ATGGGTTCTTCTCTACCCCTCTGCCCAGTGGCCAAGGGTAAGAGCATGGCTCTCGCGCTCTCAATGAGTTaGTCCAGTTCCTGGACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MGSSLPLCPVAKGKSMALALSMS*SSSWTL Trigger: CAAGGTCCAGGAACTGGAGCAACTCATTGAGAGCGC...GAGAGCCATGCTCTTACCCTTGGCCACTGGGCAGAGGGGTAGAGAAGAACCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR CCA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTGCAGGTGCCCGCCCTTaGGGAAGCGGAAGGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RYPLQLLQATYPLYKILLAGARP*GSGRVA Trigger: GGCCACCCTTCCGCTTCCCCAAGGGCGGGCACCTGC...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | AGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGAAAGGGGGATAAGTGGGGCCCTCTCATaGTTACAGCCATTGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQRLPRPTHNPNSQERGISGALS*LQPLVE Trigger: CTCAACCAATGGCTGTAACCATGAGAGGGCCCCACT...TATCCCCCTTTCTTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAAGTGGGGCCCTCTCATaGTTACAGCCATTGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQSGALS*LQPLVE Trigger: CTCAACCAATGGCTGTAACCATGAGAGGGCCCCACT...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | GAAGTAGGAGGAACCAAGGACTCCTGGGCTCACCCTAGGCCTGTCTCCCATTCCACACAGCAGTTTCAGTaGGGCCCTCTCATGGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: EVGGTKDSWAHPRPVSHSTQQFQ*GPLMVT Trigger: TGTAACCATGAGAGGGCCCCACTGAAACTGCTGTGT...GGAATGGGAGACAGGCCTAGGGTGAGCCCAGGAGTCCTTGGTTCCTCCTACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCCGGACCTGGCTGTGCTAAAATACCAACCTCTGCACCAGCAAAATCAACTCGTCCCGGGATGTGGTaGCTTCGCTGCTCTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGPGCAKIPTSAPAKSTRPGMW*LRCSAH Trigger: ATGGGCAGAGCAGCGAAGCCACCACATCCCGGGACG...AGTTGATTTTGCTGGTGCAGAGGTTGGTATTTTAGCACAGCCAGGTCCGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | GAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCCCTTCCTTGCTGGCCTCCAAGCTCTCGTTaGCAAGGAGGTCACTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EPAWQEHSRTPPKALPCWPPSSR*QGGHSQ Trigger: TTGAGAGTGACCTCCTTGCCAACGAGAGCTTGGAGG...CCAGCAAGGAAGGGCCTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAATCCATGGCGCCTCCATaGGGGAAGTTTTGGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQSMAPP*GKFWFI Trigger: GATGAACCAAAACTTCCCCCATGGAGGCGCCATGGA...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | GGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTGGTCAGCGTCCATGCTGCCACTaGAATGCCTCTTCTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: GRHEGGRGNSCAILHTGQRPCCH*NASSGY Trigger: GTATCCAGAAGAGGCATTCCAGTGGCAGCATGGACG...CTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR TCA 90 bp | ATAAATGATGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCACACCTCCATAGTAGATaGGACGCAGCAGCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: INDGHPNPTTADGRVGLAHLHSR*DAAAPA Trigger: AGCAGGAGCTGCTGCGTCTCATCTACTATGGAGGTG...TGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCATCATTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGCTCATTTCTGCTCATCTCAGGCTCTTCTaGGAGGTTGTCCTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PEAAGPGDKLLLCVLISAHLRLF*EVVLTV Trigger: GACAGTGAGGACAACCTCTCAGAAGAGCCTGAGATG...AGCAGAAATGAGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGCCAGGTTGGCTGCTGTaGAGTACCAGTAGCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSGLKQHQSSMDTTELSLPGWLL*STSSCG Trigger: ACCGCAGCTACTGGTACTTCACAGCAGCCAACCTGG...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR TCA 90 bp | ATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGATGTCATCCCTTGGCTaGACCAGAACATTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IQTLPPQMGGWGLHGLGGMSSLG*TRTLFF Trigger: AAAGAACAATGTTCTGGTTCAGCCAAGGGATGACAT...CCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | TCACAACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGCGGTGGACAGGTGTCTaGAGTAGGCGAGCCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQPQLPRKGDIPDLGNLWRWTGV*SRRAIH Trigger: ATGGATGGCTCGCCTACTGCAGACACCTGTCCACCG...CCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGTTGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | AGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGAAAGGGGGATAACTCAAATACCTGTGTaGTGCTGCTGGAGTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQRLPRPTHNPNSQERGITQIPV*CCWSRS Trigger: AGAGCGACTCCAGCAGCAGCACACAGGTATTTGAGT...TATCCCCCTTTCTTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | AGGTCTTGGTATGAAGGTGTAGAGGGAACATATTCAGGCCCAACCCTGGCCCCACCTTCTGCCTCTGTCTaGTCCACCTCATCCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSWYEGVEGTYSGPTLAPPSASV*STSSTD Trigger: GTCTGTGGATGAGGTGGAGCAGACAGAGGCAGAAGG...TGGGGCCAGGGTTGGGCCTGAATATGTTCCCTCTACACCTTCATACCAAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | CAAGCACGCGCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTGTTTTTCTTCTGACCTaGCTTCTGCCTCTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QARAREARGRQREFLCYTVFLLT*LLPLSA Trigger: AGCAGACAGAGGCAGAAGGCAGGTCAGAAGAAAAAC...AGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGCGCGTGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | AGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGTCTCGTAGTATTTACTaGTGTTTTCCACCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RWEGGACMDWAGLSGWVWSRSIY*CFPPGS Trigger: ACTACCTGGTGGAAAACAGCAGTAAATACTACGAGA...CCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAATGCTGCCACTGGAATaGCTCTTCTGGATACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQMLPLE*LFWIQS Trigger: GCTCTGTATCCAGAAGAGGCATTCCAGTGGCAGCAT...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR GCA 90 bp | TCACAACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGGCCGGTCGTCCATGCTaGCACTGGAATGCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQPQLPRKGDIPDLGNLWAGRPC*HWNASS Trigger: AGAAGAGGCATTCCAGTGGCAGCATGGACGACCGGC...CCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGTTGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR CCA 90 bp | GAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCCCTTCCTTGCTGGGTCACAGGGCAGGTCTaGAGACACGATCATGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: EPAWQEHSRTPPKALPCWVTGQV*RHDHVI Trigger: AATCACATGATCGTGTCTCCAGACCTGCCCTGTGAC...CCAGCAAGGAAGGGCCTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | AGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGAAAGGGGGATAGTCACAGGGCAGGTCTaGAGACACGATCATGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SQRLPRPTHNPNSQERGIVTGQV*RHDHVI Trigger: AATCACATGATCGTGTCTCCAGACCTGCCCTGTGAC...TATCCCCCTTTCTTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | ACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGTCAAAGGTGGCTGTCCAGGCTaGCTCCTGAAGAGCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPTPKKGGYPRLGQSLVKGGCPG*LLKSTW Trigger: CCAAGTGCTCTTCAGGAGCCAGCCTGGACAGCCACC...TTTGACCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | ACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGTCAAACCTGTGTGCTGCTGCTaGAGTCGCTCTGCAGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPTPKKGGYPRLGQSLVKPVCCC*SRSAVG Trigger: TCCGACTGCAGAGCGACTCCAGCAGCAGCACACAGG...TTTGACCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAATCGGAGTCCAGGATCTaGATCAGAGACCTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQSESRI*IRDLML Trigger: CAACATGAGGTCTCTGATCCAGATCCTGGACTCCGA...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | GAGGAACCAAGGACTCCTGGGCTCACCCTAGGCCTGTCTCCCATTCCTATAGAACAGACAACAGCAGGATaGGGGATGTGCACTCACATC | + |
|
Preference number: 4 (lower is better) Translates to: EEPRTPGLTLGLSPIPIEQTTAG*GMCTHI Trigger: GATGTGAGTGCACATCCCCCATCCTGCTGTTGTCTG...TTCTATAGGAATGGGAGACAGGCCTAGGGTGAGCCCAGGAGTCCTTGGTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS-3UTR TCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGGGAGACACGATCATGTaGTTGACCAGGGCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSGLKQHQSSMDTTELSLGDTIM*LTRADR Trigger: CCTGTCAGCCCTGGTCAATCACATGATCGTGTCTCC...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR TCA 90 bp | TCACAACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGCACCTCCATAGTAGATaGGACGCAGCAGCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQPQLPRKGDIPDLGNLWHLHSR*DAAAPA Trigger: AGCAGGAGCTGCTGCGTCTCATCTACTATGGAGGTG...CCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGTTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR TCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGCACCTCCATAGTAGATaGGACGCAGCAGCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSGLKQHQSSMDTTELSLHLHSR*DAAAPA Trigger: AGCAGGAGCTGCTGCGTCTCATCTACTATGGAGGTG...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR TCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGGCTGCAGCTCTGGGATaGCTCATTGCTGATGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSGLKQHQSSMDTTELSLAAALG*LIADGG Trigger: TCCACCATCAGCAATGAGTCATCCCAGAGCTGCAGC...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR TCA 90 bp | CCCAGCCTTGCTGAGCATGGCTTCCACCAAGGCTGCAGGCTTCTGAGCCCAGATATGTCATCCCTTGGCTaGACCAGAACATTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLAEHGFHQGCRLLSPDMSSLG*TRTLFF Trigger: AAAGAACAATGTTCTGGTTCAGCCAAGGGATGACAT...ATCTGGGCTCAGAAGCCTGCAGCCTTGGTGGAAGCCATGCTCAGCAAGGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
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| CDS-3UTR GCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGATACCTGTGTGCTGCTaGTGGAGTCGCTCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSGLKQHQSSMDTTELSLIPVCC*WSRSAV Trigger: GACTGCAGAGCGACTCCAGCAGCAGCACACAGGTAT...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | ACCCTAGGCCTGTCTCCCATTCCTATAGAAACAACTAAAGCCGGATGTGGGCAGCTCTGGATTCCATCCTaGCTCACCAGCACGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLGLSPIPIETTKAGCGQLWIPS*LTSTTV Trigger: GACTGTCGTGCTGGTGAGCCAGGATGGAATCCAGAG...CTGCCCACATCCGGCTTTAGTTGTTTCTATAGGAATGGGAGACAGGCCTAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS-3UTR CCA 90 bp | CACCTACAGGATGCCTTTTCTAAAGAGAGTCTCCTGGCAGCGGATAGAGAAAAGCGGAAGGGTGGCCTCTaGATTCCATCCTGGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: HLQDAFSKESLLAADREKRKGGL*IPSWLT Trigger: GGTGAGCCAGGATGGAATCCAGAGGCCACCCTTCCG...CTTTTCTCTATCCGCTGCCAGGAGACTCTCTTTAGAAAAGGCATCCTGTAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | CAAGCACGCGCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTGCTCTGGAGAGGATCTaGTACTTCATGTTATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: QARAREARGRQREFLCYTALERI*YFMLSH Trigger: GTGTGATAACATGAAGTACCAGATCCTCTCCAGAGC...AGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGCGCGTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCCCAGAGGAGAAGTTGTaGGAGGAAGGGTGTCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: INFYLMAFLTHTLGSRGTPEEKL*EEGCPE Trigger: CTCCGGACACCCTTCCTCCCACAACTTCTCCTCTGG...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | AGGTCTTGGTATGAAGGTGTAGAGGGAACATATTCAGGCCCAACCCTGGCCCCACCTCCAAGCTCTCGTTaGCAAGGAGGTCACTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSWYEGVEGTYSGPTLAPPPSSR*QGGHSQ Trigger: TTGAGAGTGACCTCCTTGCCAACGAGAGCTTGGAGG...TGGGGCCAGGGTTGGGCCTGAATATGTTCCCTCTACACCTTCATACCAAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | GGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTGGTCAGCTGCAGTCTTCATCTTaGTATACTCCAGGGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: GRHEGGRGNSCAILHTGQLQSSS*YTPGHM Trigger: CATGTGCCCTGGAGTATACCAAGATGAAGACTGCAG...CTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
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| CDS-3UTR TCA 90 bp | TCACAACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGGTTCTGGAGAATAGGTaGCTCCACTGGAGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQPQLPRKGDIPDLGNLWVLENR*LHWRTQ Trigger: CTGTGTCCTCCAGTGGAGTCACCTATTCTCCAGAAC...CCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGTTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | AGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGAAAGGGGGATAAGATATAGCTGCACATaGTGTTCCTCAGCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQRLPRPTHNPNSQERGIRYSCT*CSSASP Trigger: TGGAGAAGCTGAGGAACATCATGTGCAGCTATATCT...TATCCCCCTTTCTTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR TCA 90 bp | GTCTTGATTGCCCCCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTTATTGTTCTCCAGGATaGTGTCTCTGTAGACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLIAPRGCRSWGQASAMCYCSPG*CLCRPP Trigger: TGGAGGTCTACAGAGACATCATCCTGGAGAACAATA...ACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAATCAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTGACCAGCTCGTCGGCTaGGGGGTCAGTCCAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RYPLQLLQATYPLYKILLDQLVG*GVSPEV Trigger: CACTTCTGGACTGACCCCTCAGCCGACGAGCTGGTC...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR GCA 90 bp | ACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGTCAAATTCCGAGGACTGGGTTaGCATAGGGGTGGAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPTPKKGGYPRLGQSLVKFRGLG*HRGGRL Trigger: CAACCTTCCACCCCTATGGCAACCCAGTCCTCGGAA...TTTGACCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACCTGGCTGTCAACCCTTaGCCAGCGTCACAGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNLCTSKINFYLMAFLTHLAVNP*PASQGR Trigger: CCTGCCCTGTGACGCTGGGCAAGGGTTGACAGCCAG...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | CCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGCTCATTTCTGCTTGTATTTTTCCCAGATaGTGGCTGTCAACCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PEAAGPGDKLLLCVLISACIFPR*WLSTLA Trigger: GGCAAGGGTTGACAGCCAGCATCTGGGAAAAATACA...AGCAGAAATGAGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGCAAATACCTGTGTGCTaGTGCTGGAGTCGCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSGLKQHQSSMDTTELSLQIPVC*CWSRSA Trigger: TGCAGAGCGACTCCAGCAGCAGCACACAGGTATTTG...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | CACCTACAGGATGCCTTTTCTAAAGAGAGTCTCCTGGCAGCGGATAGAGAAAAGACATCCGCTGTCTGGTaGAGAGACAGGTACCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLQDAFSKESLLAADREKTSAVW*RDRYPG Trigger: GCCAGGGTACCTGTCTCTGCACCAGACAGCGGATGT...CTTTTCTCTATCCGCTGCCAGGAGACTCTCTTTAGAAAAGGCATCCTGTAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR CCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCCTCTGGATTCCATCCTaGCTCACCAGCACGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: INFYLMAFLTHTLGSRGTLWIPS*LTSTTV Trigger: GACTGTCGTGCTGGTGAGCCAGGATGGAATCCAGAG...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | GGCCTGTCTCCCATTCCTATAGAAACAACTAAAGCCGGATGTGGGCAGAATCCCAGTGGGGCCCTCTCATaGTTACAGCCATTGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLSPIPIETTKAGCGQNPSGALS*LQPLVE Trigger: CTCAACCAATGGCTGTAACCATGAGAGGGCCCCACT...GGGATTCTGCCCACATCCGGCTTTAGTTGTTTCTATAGGAATGGGAGACAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTGGTCAGGCTCTGGAGAGGATCTaGTACTTCATGTTATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GRHEGGRGNSCAILHTGQALERI*YFMLSH Trigger: GTGTGATAACATGAAGTACCAGATCCTCTCCAGAGC...CTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | GAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGGCCCTTCCTTGCTGGTGGCTGGGTTCCCATTaGGGATTTTGGGATGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EPAWQEHSRTPPKALPCWWLGSH*GFWDVF Trigger: AAAAACATCCCAAAATCCCCAATGGGAACCCAGCCA...CCAGCAAGGAAGGGCCTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | AGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGCTGGATACAGAGCGCTaGCCGCTTGGTGGGCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKINFYLMAFLTHTLGSRLDTER*PLGGRV Trigger: GACTCGCCCACCAAGCGGCCAGCGCTCTGTATCCAG...CCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR TCA 90 bp | AGCTCCGGACCTGGCTGTGCTAAAATACCAACCTCTGCACCAGCAAAATCAACTCATCTCAGGCTCTTCTaGGAGGTTGTCCTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGPGCAKIPTSAPAKSTHLRLF*EVVLTV Trigger: GACAGTGAGGACAACCTCTCAGAAGAGCCTGAGATG...AGTTGATTTTGCTGGTGCAGAGGTTGGTATTTTAGCACAGCCAGGTCCGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | TTTACTTCCGATACTAGCCATAGAAAGCTGAATGCATCAAGCAAAGCGGCTGATGACCAGCTCGTCGGCTaGGGGGTCAGTCCAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FTSDTSHRKLNASSKAADDQLVG*GVSPEV Trigger: CACTTCTGGACTGACCCCTCAGCCGACGAGCTGGTC...ATCAGCCGCTTTGCTTGATGCATTCAGCTTTCTATGGCTAGTATCGGAAGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS-3UTR GCA 90 bp | TTTACTTCCGATACTAGCCATAGAAAGCTGAATGCATCAAGCAAAGCGGCTGATCTGGCTGTCAACCCTTaGCCAGCGTCACAGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTSDTSHRKLNASSKAADLAVNP*PASQGR Trigger: CCTGCCCTGTGACGCTGGGCAAGGGTTGACAGCCAG...ATCAGCCGCTTTGCTTGATGCATTCAGCTTTCTATGGCTAGTATCGGAAGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | ATAAATGATGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGTATTTTTCCCAGATaGTGGCTGTCAACCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: INDGHPNPTTADGRVGLACIFPR*WLSTLA Trigger: GGCAAGGGTTGACAGCCAGCATCTGGGAAAAATACA...TGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCATCATTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCATCTGCTTGGCGTTGTaGCGCTCAGCCATTTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: INFYLMAFLTHTLGSRGTICLAL*RSAISL Trigger: CAACGAAATGGCTGAGCGGCACAACGCCAAGCAGAT...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGGAACCAAGGACTCCTGGGCTCACCCTAGGCCTGTCTCCCATTCCTATTTGATAAATGCTTCTTaGAGACAACAGCAGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGGTKDSWAHPRPVSHSYLINAS*RQQQDG Trigger: CCCATCCTGCTGTTGTCTGCAAGAAGCATTTATCAA...ATAGGAATGGGAGACAGGCCTAGGGTGAGCCCAGGAGTCCTTGGTTCCTCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS-3UTR CCA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTGGGGAAGCGGAAGGGTaGCCTCTGGATTCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RYPLQLLQATYPLYKILLGEAEG*PLDSIL Trigger: CAGGATGGAATCCAGAGGCCACCCTTCCGCTTCCCC...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTGGTGGCTGTCCAGGCTaGCTCCTGAAGAGCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RYPLQLLQATYPLYKILLGGCPG*LLKSTW Trigger: CCAAGTGCTCTTCAGGAGCCAGCCTGGACAGCCACC...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCCCTGAGCTGCAGCTCTaGGATGACTCATTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: INFYLMAFLTHTLGSRGTPELQL*DDSLLM Trigger: CATCAGCAATGAGTCATCCCAGAGCTGCAGCTCAGG...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | AGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGAGCAAGTGCCGTTaGCTGGGTTCCCATTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKINFYLMAFLTHTLGSRGSKCR*LGSHWG Trigger: TCCCCAATGGGAACCCAGCCAACGGCACTTGCTCCC...CCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | TTTACTTCCGATACTAGCCATAGAAAGCTGAATGCATCAAGCAAAGCGGCTGATCTGGATACAGAGCGCTaGCCGCTTGGTGGGCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FTSDTSHRKLNASSKAADLDTER*PLGGRV Trigger: GACTCGCCCACCAAGCGGCCAGCGCTCTGTATCCAG...ATCAGCCGCTTTGCTTGATGCATTCAGCTTTCTATGGCTAGTATCGGAAGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGTCAAAGGGATGTTTTTCTTCTaGCCTGCCTTCTGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPTPKKGGYPRLGQSLVKGMFFF*PAFCLC Trigger: ACAGAGGCAGAAGGCAGGTCAGAAGAAAAACATCCC...TTTGACCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR TCA 90 bp | AGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGCCGCACAGAAGGAGATaGTGTGGCTGCTGTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SKINFYLMAFLTHTLGSRPHRRR*CGCCPR Trigger: ACGAGGACAGCAGCCACATCATCTCCTTCTGTGCGG...CCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR GCA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTCTCTCAAGGCTATCTTaGACGGCCAGCTCCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RYPLQLLQATYPLYKILLLSRLS*TASSSR Trigger: TCGGGAGGAGCTGGCCGTGCAAGATAGCCTTGAGAG...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | ACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGTCAAAGCACATCTTTCTCAATaGGGTGCAGGTTCACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPTPKKGGYPRLGQSLVKAHLSQ*GAGSRC Trigger: ACACCGTGAACCTGCACCGCATTGAGAAAGATGTGC...TTTGACCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | AGCTCCGGACCTGGCTGTGCTAAAATACCAACCTCTGCACCAGCAAAATCAACTACACAGCAGTTTCAGTaGGGCCCTCTCATGGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SSGPGCAKIPTSAPAKSTTQQFQ*GPLMVT Trigger: TGTAACCATGAGAGGGCCCCACTGAAACTGCTGTGT...AGTTGATTTTGCTGGTGCAGAGGTTGGTATTTTAGCACAGCCAGGTCCGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | CCAAGGACTCCTGGGCTCACCCTAGGCCTGTCTCCCATTCCTATAGAAACAACTGCTCTGGAGAGGATCTaGTACTTCATGTTATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PRTPGLTLGLSPIPIETTALERI*YFMLSH Trigger: GTGTGATAACATGAAGTACCAGATCCTCTCCAGAGC...AGTTGTTTCTATAGGAATGGGAGACAGGCCTAGGGTGAGCCCAGGAGTCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS-3UTR CCA 90 bp | TTTACTTCCGATACTAGCCATAGAAAGCTGAATGCATCAAGCAAAGCGGCTGATGGTGGCTGTCCAGGCTaGCTCCTGAAGAGCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTSDTSHRKLNASSKAADGGCPG*LLKSTW Trigger: CCAAGTGCTCTTCAGGAGCCAGCCTGGACAGCCACC...ATCAGCCGCTTTGCTTGATGCATTCAGCTTTCTATGGCTAGTATCGGAAGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CCA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTCCAGAGGAGAAGTTGTaGGAGGAAGGGTGTCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RYPLQLLQATYPLYKILLPEEKL*EEGCPE Trigger: CTCCGGACACCCTTCCTCCCACAACTTCTCCTCTGG...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACGCTGGAAGGCTGCGTTaGGCATCCAAGACGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TNLCTSKINFYLMAFLTHAGRLR*ASKTLS Trigger: AGACAGCGTCTTGGATGCCCAACGCAGCCTTCCAGC...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR GCA 90 bp | TTTACTTCCGATACTAGCCATAGAAAGCTGAATGCATCAAGCAAAGCGGCTGATCGGTGGACAGGTGTCTaGAGTAGGCGAGCCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTSDTSHRKLNASSKAADRWTGV*SRRAIH Trigger: ATGGATGGCTCGCCTACTGCAGACACCTGTCCACCG...ATCAGCCGCTTTGCTTGATGCATTCAGCTTTCTATGGCTAGTATCGGAAGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS-3UTR GCA 90 bp | CACCTACAGGATGCCTTTTCTAAAGAGAGTCTCCTGGCAGCGGATAGAGAAAAGACTCAAATACCTGTGTaGTGCTGCTGGAGTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLQDAFSKESLLAADREKTQIPV*CCWSRS Trigger: AGAGCGACTCCAGCAGCAGCACACAGGTATTTGAGT...CTTTTCTCTATCCGCTGCCAGGAGACTCTCTTTAGAAAAGGCATCCTGTAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR GCA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTCTCATGTTGGCGAAGTaGGTATCCATGGCGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RYPLQLLQATYPLYKILLLMLAK*VSMAPP Trigger: TGGAGGCGCCATGGATACGCACTTCGCCAACATGAG...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | CACCTACAGGATGCCTTTTCTAAAGAGAGTCTCCTGGCAGCGGATAGAGAAAAGACACAGCAGTTTCAGTaGGGCCCTCTCATGGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: HLQDAFSKESLLAADREKTQQFQ*GPLMVT Trigger: TGTAACCATGAGAGGGCCCCACTGAAACTGCTGTGT...CTTTTCTCTATCCGCTGCCAGGAGACTCTCTTTAGAAAAGGCATCCTGTAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | TTTACTTCCGATACTAGCCATAGAAAGCTGAATGCATCAAGCAAAGCGGCTGATCAGAGACAGGTACCCTaGCACGGCCTCCATGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FTSDTSHRKLNASSKAADQRQVP*HGLHVI Trigger: GATGACATGGAGGCCGTGCCAGGGTACCTGTCTCTG...ATCAGCCGCTTTGCTTGATGCATTCAGCTTTCTATGGCTAGTATCGGAAGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS-3UTR TCA 90 bp | ACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGTCAAAAGATATAGCTGCACATaGTGTTCCTCAGCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPTPKKGGYPRLGQSLVKRYSCT*CSSASP Trigger: TGGAGAAGCTGAGGAACATCATGTGCAGCTATATCT...TTTGACCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR TCA 90 bp | ACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGTCAAATATTGTTCTCCAGGATaGTGTCTCTGTAGACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPTPKKGGYPRLGQSLVKYCSPG*CLCRPP Trigger: TGGAGGTCTACAGAGACATCATCCTGGAGAACAATA...TTTGACCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR GCA 90 bp | GGCCTGTCTCCCATTCCTATAGAAACAACTAAAGCCGGATGTGGGCAGAATCCCGAGGCACTTGATAAATaGTTCTTGCAGACAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLSPIPIETTKAGCGQNPEALDK*FLQTTA Trigger: TGCTGTTGTCTGCAAGAAGCATTTATCAAGTGCCTC...GGGATTCTGCCCACATCCGGCTTTAGTTGTTTCTATAGGAATGGGAGACAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS-3UTR CCA 90 bp | TTTACTTCCGATACTAGCCATAGAAAGCTGAATGCATCAAGCAAAGCGGCTGATCTCTGGATTCCATCCTaGCTCACCAGCACGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FTSDTSHRKLNASSKAADLWIPS*LTSTTV Trigger: GACTGTCGTGCTGGTGAGCCAGGATGGAATCCAGAG...ATCAGCCGCTTTGCTTGATGCATTCAGCTTTCTATGGCTAGTATCGGAAGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS-3UTR CCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCTGGCTGGGTTCCCATTaGGGATTTTGGGATGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: INFYLMAFLTHTLGSRGTWLGSH*GFWDVF Trigger: AAAAACATCCCAAAATCCCCAATGGGAACCCAGCCA...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTGCAAGTGCCGTTGGCTaGGTTCCCATTGGGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RYPLQLLQATYPLYKILLASAVG*VPIGDF Trigger: AAAATCCCCAATGGGAACCCAGCCAACGGCACTTGC...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTTCCATGGCGCCTCCATaGGGGAAGTTTTGGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RYPLQLLQATYPLYKILLSMAPP*GKFWFI Trigger: GATGAACCAAAACTTCCCCCATGGAGGCGCCATGGA...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTATTTTTCCCAGATGCTaGCTGTCAACCCTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RYPLQLLQATYPLYKILLIFPRC*LSTLAQ Trigger: CTGGGCAAGGGTTGACAGCCAGCATCTGGGAAAAAT...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACTCGGAGTCCAGGATCTaGATCAGAGACCTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TNLCTSKINFYLMAFLTHSESRI*IRDLML Trigger: CAACATGAGGTCTCTGATCCAGATCCTGGACTCCGA...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CCA 90 bp | TTTACTTCCGATACTAGCCATAGAAAGCTGAATGCATCAAGCAAAGCGGCTGATCGTCCATGCTGCCACTaGAATGCCTCTTCTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: FTSDTSHRKLNASSKAADRPCCH*NASSGY Trigger: GTATCCAGAAGAGGCATTCCAGTGGCAGCATGGACG...ATCAGCCGCTTTGCTTGATGCATTCAGCTTTCTATGGCTAGTATCGGAAGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR GCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACTGTATTTTTCCCAGATaGTGGCTGTCAACCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TNLCTSKINFYLMAFLTHCIFPR*WLSTLA Trigger: GGCAAGGGTTGACAGCCAGCATCTGGGAAAAATACA...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR GCA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCTCTCGTAGTATTTACTaGTGTTTTCCACCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: INFYLMAFLTHTLGSRGTSRSIY*CFPPGS Trigger: ACTACCTGGTGGAAAACAGCAGTAAATACTACGAGA...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR GCA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACCGGGTCCATCAAGAGTaGCTCCTTCTCGTAGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: TNLCTSKINFYLMAFLTHRVHQE*LLLVVF Trigger: AAATACTACGAGAAGGAGGCACTCTTGATGGACCCG...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR GCA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTGCTTCTTCCATGATCTaGTTCACCTCCTTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RYPLQLLQATYPLYKILLASSMI*FTSFFT Trigger: TGTGAAGAAGGAGGTGAAGCAGATCATGGAAGAAGC...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR GCA 90 bp | TTTACTTCCGATACTAGCCATAGAAAGCTGAATGCATCAAGCAAAGCGGCTGATGCTTCTTCCATGATCTaGTTCACCTCCTTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FTSDTSHRKLNASSKAADASSMI*FTSFFT Trigger: TGTGAAGAAGGAGGTGAAGCAGATCATGGAAGAAGC...ATCAGCCGCTTTGCTTGATGCATTCAGCTTTCTATGGCTAGTATCGGAAGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS CCA 90 bp | CTTGCACGGCCAGCTCCTCCCGAGGGGCCTCGTCCCGGGATGTGGTaGCTTCGCTGCTCTGCCCATCTTCCACGCTGCTGTCCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LARPAPPEGPRPGMW*LRCSAHLPRCCPQA Trigger: GGCCTGGGGACAGCAGCGTGGAAGATGGGCAGAGCAGCGAAGCCACCACATCCCGGGACGAGGCCCCTCGGGAGGAGCTGGCCGTGCAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS GCA 90 bp | CCAGCTCCTCCCGAGGGGCCTCGTCCCGGGATGTGGTGGCTTCGCTaGTCTGCCCATCTTCCACGCTGCTGTCCCCAGGCCGAAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: PAPPEGPRPGMWWLR*SAHLPRCCPQAETQ Trigger: CTGTGTTTCGGCCTGGGGACAGCAGCGTGGAAGATGGGCAGAGCAGCGAAGCCACCACATCCCGGGACGAGGCCCCTCGGGAGGAGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS CCA 90 bp | TGGTGGAGTCCCGGTGCAGCATCCGGTGAAGGTGGCTGTCCAGGCTaGCTCCTGAAGAGCACTTGGCCAGGGCAGCCGCGTGGGACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WWSPGAASGEGGCPG*LLKSTWPGQPRGTP Trigger: GGGAGTCCCACGCGGCTGCCCTGGCCAAGTGCTCTTCAGGAGCCAGCCTGGACAGCCACCTTCACCGGATGCTGCACCGGGACTCCACCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 90 bp | TCCTCCCGAGGGGCCTCGTCCCGGGATGTGGTGGCTTCGCTGCTCTaGCCATCTTCCACGCTGCTGTCCCCAGGCCGAAACACAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSRGASSRDVVASLL*PSSTLLSPGRNTAG Trigger: TCCAGCTGTGTTTCGGCCTGGGGACAGCAGCGTGGAAGATGGGCAGAGCAGCGAAGCCACCACATCCCGGGACGAGGCCCCTCGGGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CCA 90 bp | TATCTTGCACGGCCAGCTCCTCCCGAGGGGCCTCGTCCCGGGATGTaGTGGCTTCGCTGCTCTGCCCATCTTCCACGCTGCTGTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YLARPAPPEGPRPGM*WLRCSAHLPRCCPQ Trigger: CTGGGGACAGCAGCGTGGAAGATGGGCAGAGCAGCGAAGCCACCACATCCCGGGACGAGGCCCCTCGGGAGGAGCTGGCCGTGCAAGATA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | TACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGGCTCCTGAAGAGCACTaGGCCAGGGCAGCCGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YHRRWEGGACMDWAGLSGAPEEH*ARAAAW Trigger: CCACGCGGCTGCCCTGGCCAAGTGCTCTTCAGGAGC...CCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CAA 90 bp | ACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTTCCAGTTCCTGGACCTaGCGGCTCAGCTCCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TTADGRVGLAWIGRGFLGSSSWT*RLSSSA Trigger: GGCCGAGGAGCTGAGCCGCAAGGTCCAGGAACTGGA...ACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS GCA 90 bp | CGTCCCGGGATGTGGTGGCTTCGCTGCTCTGCCCATCTTCCACGCTaGTGTCCCCAGGCCGAAACACAGCTGGAAGGCTGCGTTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RPGMWWLRCSAHLPR*CPQAETQLEGCVGH Trigger: ATGCCCAACGCAGCCTTCCAGCTGTGTTTCGGCCTGGGGACAGCAGCGTGGAAGATGGGCAGAGCAGCGAAGCCACCACATCCCGGGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS CCA 90 bp | CCATCTCAGGCTCTTCTGAGAGGTTGTCCTCACTGTCAGCCCGACTaGGCTTGTCCGCCTCACCGGGCCAGCCGTCCATCACCGCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSQALLRGCPHCQPD*ACPPHRASRPSPRH Trigger: ATGGCGCGGTGATGGACGGCTGGCCCGGTGAGGCGGACAAGCCCAGTCGGGCTGACAGTGAGGACAACCTCTCAGAAGAGCCTGAGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGGAGGAACCAAGGACTCCTGGGCTCACCCTAGGCCTGTCTCCCATTCCAGCAGGTGCCCGCCCTaGGGGAAGCGGAAGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EVGGTKDSWAHPRPVSHSSRCPP*GKRKGG Trigger: GCCACCCTTCCGCTTCCCCAAGGGCGGGCACCTGCT...GGAATGGGAGACAGGCCTAGGGTGAGCCCAGGAGTCCTTGGTTCCTCCTACTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS-3UTR CAA 90 bp | TGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGAGCAGGTGCCCGCCCTaGGGGAAGCGGAAGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WTSKPYHRRWEGGACMDWSRCPP*GKRKGG Trigger: GCCACCCTTCCGCTTCCCCAAGGGCGGGCACCTGCT...CCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS GCA 90 bp | TCCTCCAAGCTCTCGTTGGCAAGGAGGTCACTCTCAAGGCTATCTTaGACGGCCAGCTCCTCCCGAGGGGCCTCGTCCCGGGATGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSKLSLARRSLSRLS*TASSSRGASSRDVV Trigger: CACCACATCCCGGGACGAGGCCCCTCGGGAGGAGCTGGCCGTGCAAGATAGCCTTGAGAGTGACCTCCTTGCCAACGAGAGCTTGGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS GCA 90 bp | CTGTCCCCTCAAAGGAGTGCCTGCCACGAGCACCTTCGTCCGCTTTaGCCTGGGCACTGGGAACATGCCTGGGGCGCGAGGCACTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LSPQRSACHEHLRPL*PGHWEHAWGARHLI Trigger: TATCAAGTGCCTCGCGCCCCAGGCATGTTCCCAGTGCCCAGGGCAAAGCGGACGAAGGTGCTCGTGGCAGGCACTCCTTTGAGGGGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS CCA 90 bp | CTGGTTTGTGCCCACTGGAGCCCCTTGGCCACCACTAGCATGGACTaGCCCGCAGCAAGCATCATCCAGGCAGGGCCAATGGACACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVCAHWSPLATTSMD*PAASIIQAGPMDTG Trigger: GCCTGTGTCCATTGGCCCTGCCTGGATGATGCTTGCTGCGGGCCAGTCCATGCTAGTGGTGGCCAAGGGGCTCCAGTGGGCACAAACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154248.8 |
||
| CDS-3UTR CAA 90 bp | GGGACAGCCTGTTCCGAGCCAGCCTGGCAGGAACATTCTAGAACACCACCAAAGAGCAGGTGCCCGCCCTaGGGGAAGCGGAAGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTACSEPAWQEHSRTPPKSRCPP*GKRKGG Trigger: GCCACCCTTCCGCTTCCCCAAGGGCGGGCACCTGCT...CTTTGGTGGTGTTCTAGAATGTTCCTGCCAGGCTGGCTCGGAACAGGCTGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | AGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGGGTTACAGCCATTGGTaGAGCCGCCGTCAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RWEGGACMDWAGLSGWVWGYSHW*SRRQLS Trigger: GCTCAGCTGACGGCGGCTCAACCAATGGCTGTAACC...CCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS-3UTR CAA 90 bp | ACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGCTCTGGGATGACTCATaGCTGATGGTGGAGTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TADGRVGLAWIGRGFLGGLWDDS*LMVESR Trigger: CCGGGACTCCACCATCAGCAATGAGTCATCCCAGAG...CCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS-3UTR CAA 90 bp | CATACTGGTCCACAGACACCAGGACCTTGTGCTGGGCTGAAGGAAGGGGTGGGGGGGGAGCAAGTGCCGTaGGCTGGGTTCCCATTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HTGPQTPGPCAGLKEGVGGEQVP*AGFPLG Trigger: CCCCAATGGGAACCCAGCCAACGGCACTTGCTCCCC...CCCCACCCCTTCCTTCAGCCCAGCACAAGGTCCTGGTGTCTGTGGACCAGTATG 63% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CAA 90 bp | TACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGAAGAGCGCCGCGATCTaGTTGCTTCGCAGGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: YHRRWEGGACMDWAGLSGKSAAI*LLRRKP Trigger: CGGCTTCCTGCGAAGCAACAAGATCGCGGCGCTCTT...CCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS-3UTR CAA 90 bp | TACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGGCCGGAGGGAAGCCTTaGCCCACCTTCATGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YHRRWEGGACMDWAGLSGAGGKP*PTFMKS Trigger: GCTCTTCATGAAGGTGGGCAAAGGCTTCCCTCCGGC...CCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS TCA 90 bp | GCACGTTCTCTTGCAGGCCCTGGATCTGGTTTCGCGCGCTCTCAATaGGTTGCTCCAGTTCCTGGACCTTGCGGCTCAGCTCCTCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ARSLAGPGSGFARSQ*VAPVPGPCGSAPRP Trigger: CGGCCGAGGAGCTGAGCCGCAAGGTCCAGGAACTGGAGCAACTCATTGAGAGCGCGCGAAACCAGATCCAGGGCCTGCAAGAGAACGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 90 bp | TTCTCTTGCAGGCCCTGGATCTGGTTTCGCGCGCTCTCAATGAGTTaGTCCAGTTCCTGGACCTTGCGGCTCAGCTCCTCGGCCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSCRPWIWFRALSMS*SSSWTLRLSSSAGG Trigger: CCCTCCGGCCGAGGAGCTGAGCCGCAAGGTCCAGGAACTGGAGCAACTCATTGAGAGCGCGCGAAACCAGATCCAGGGCCTGCAAGAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CCA 90 bp | CCCTCAAAGGAGTGCCTGCCACGAGCACCTTCGTCCGCTTTGCCCTaGGCACTGGGAACATGCCTGGGGCGCGAGGCACTTGATAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: PSKECLPRAPSSALP*ALGTCLGREALDKC Trigger: GCATTTATCAAGTGCCTCGCGCCCCAGGCATGTTCCCAGTGCCCAGGGCAAAGCGGACGAAGGTGCTCGTGGCAGGCACTCCTTTGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS CCA 90 bp | ACCCTCTGGTTTGTGCCCACTGGAGCCCCTTGGCCACCACTAGCATaGACTGGCCCGCAGCAAGCATCATCCAGGCAGGGCCAATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TLWFVPTGAPWPPLA*TGPQQASSRQGQWT Trigger: TGTCCATTGGCCCTGCCTGGATGATGCTTGCTGCGGGCCAGTCCATGCTAGTGGTGGCCAAGGGGCTCCAGTGGGCACAAACCAGAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154248.8 |
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| CDS-3UTR CAA 90 bp | TGGACATCCAAACCCTACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCTGGCTGTCAACCCTaGCCCAGCGTCACAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WTSKPYHRRWEGGACMDWAGCQP*PSVTGQ Trigger: CTGCCCTGTGACGCTGGGCAAGGGTTGACAGCCAGC...CCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTAGGGTTTGGATGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS-3UTR CAA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGCTCCTGAAGAGCACTaGGCCAGGGCAGCCGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQAPEEH*ARAAAW Trigger: CCACGCGGCTGCCCTGGCCAAGTGCTCTTCAGGAGC...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | CCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTCGCGCTCTCAATGAGTaGCTCCAGTTCCTGGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: PQMGGWGLHGLGGAFWVGRALNE*LQFLDL Trigger: AAGGTCCAGGAACTGGAGCAACTCATTGAGAGCGCG...ACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS GCA 90 bp | AGCGGGGACAGGTTAGGCAGCTTCGGCAGCTTCCGCACGTTCTCTTaGAGGCCCTGGATCTGGTTTCGCGCGCTCTCAATGAGTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGDRLGSFGSFRTFS*RPWIWFRALSMSCS Trigger: GGAGCAACTCATTGAGAGCGCGCGAAACCAGATCCAGGGCCTGCAAGAGAACGTGCGGAAGCTGCCGAAGCTGCCTAACCTGTCCCCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 90 bp | ATTTTGTCCAGGACCCTCTCGAACAGGGCGGTGCGGATCCACAGGTaGTTGATGGCCAGCGGGGACAGGTTAGGCAGCTTCGGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILSRTLSNRAVRIHR*LMASGDRLGSFGSF Trigger: GAAGCTGCCGAAGCTGCCTAACCTGTCCCCGCTGGCCATCAAGCACCTGTGGATCCGCACCGCCCTGTTCGAGAGGGTCCTGGACAAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CCA 90 bp | AGGAGTGCCTGCCACGAGCACCTTCGTCCGCTTTGCCCTGGGCACTaGGAACATGCCTGGGGCGCGAGGCACTTGATAAATGCTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSACHEHLRPLCPGH*EHAWGARHLINASC Trigger: GCAAGAAGCATTTATCAAGTGCCTCGCGCCCCAGGCATGTTCCCAGTGCCCAGGGCAAAGCGGACGAAGGTGCTCGTGGCAGGCACTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS-3UTR CAA 90 bp | TACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGCCACTCCGACATGGTTaGTGCGTAGCAGGCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YHRRWEGGACMDWAGLSGPLRHG*CVAGMD Trigger: ATCCATGCCTGCTACGCACAAACCATGTCGGAGTGG...CCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS-3UTR CAA 90 bp | CATACTGGTCCACAGACACCAGGACCTTGTGCTGGGCTGAAGGAAGGGGTGGGGGGGGATGCCTCGTTATaGGCAGAGGAGGTCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HTGPQTPGPCAGLKEGVGGDASL*AEEVTA Trigger: GGCTGTGACCTCCTCTGCCAATAACGAGGCATCCCC...CCCCACCCCTTCCTTCAGCCCAGCACAAGGTCCTGGTGTCTGTGGACCAGTATG 61% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS TCA 90 bp | GATGATGCGGAACACGTAATCCGTGGCTTCGTCGTCCTCCTTGTCTaGAGACGTGGACTCGGAGGACCCCTGTGGGCTGCGCTTGCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DDAEHVIRGFVVLLV*RRGLGGPLWAALAQ Trigger: TTGCGCAAGCGCAGCCCACAGGGGTCCTCCGAGTCCACGTCTTCAGACAAGGAGGACGACGAAGCCACGGATTACGTGTTCCGCATCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CCA 90 bp | GGAGAGACCAGAGGAGAAGTTGTGGGAGGAAGGGTGTCCGGAGTCTaGGGAGCAAGTGCCGTTGGCTGGGTTCCCATTGGGGATTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GETRGEVVGGRVSGV*GASAVGWVPIGDFG Trigger: CCCAAAATCCCCAATGGGAACCCAGCCAACGGCACTTGCTCCCCAGACTCCGGACACCCTTCCTCCCACAACTTCTCCTCTGGTCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CCA 90 bp | TCCACGCTGCTGTCCCCAGGCCGAAACACAGCTGGAAGGCTGCGTTaGGCATCCAAGACGCTGTCTTCAGTGCTAAGACTGGGCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: STLLSPGRNTAGRLR*ASKTLSSVLRLGSE Trigger: CTCTGAGCCCAGTCTTAGCACTGAAGACAGCGTCTTGGATGCCCAACGCAGCCTTCCAGCTGTGTTTCGGCCTGGGGACAGCAGCGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS CCA 90 bp | GCTCTGCCCATCTTCCACGCTGCTGTCCCCAGGCCGAAACACAGCTaGAAGGCTGCGTTGGGCATCCAAGACGCTGTCTTCAGTGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: ALPIFHAAVPRPKHS*KAALGIQDAVFSAK Trigger: CTTAGCACTGAAGACAGCGTCTTGGATGCCCAACGCAGCCTTCCAGCTGTGTTTCGGCCTGGGGACAGCAGCGTGGAAGATGGGCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CCA 90 bp | GGCAGCTTCGGCAGCTTCCGCACGTTCTCTTGCAGGCCCTGGATCTaGTTTCGCGCGCTCTCAATGAGTTGCTCCAGTTCCTGGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSFGSFRTFSCRPWI*FRALSMSCSSSWTL Trigger: CAAGGTCCAGGAACTGGAGCAACTCATTGAGAGCGCGCGAAACCAGATCCAGGGCCTGCAAGAGAACGTGCGGAAGCTGCCGAAGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGGAGGAACCAAGGACTCCTGGGCTCACCCTAGGCCTGTCTCCCATTCCGGTTACAGCCATTGGTaGAGCCGCCGTCAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: EVGGTKDSWAHPRPVSHSGYSHW*SRRQLS Trigger: GCTCAGCTGACGGCGGCTCAACCAATGGCTGTAACC...GGAATGGGAGACAGGCCTAGGGTGAGCCCAGGAGTCCTTGGTTCCTCCTACTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS-3UTR CAA 90 bp | AGGTCTTGGTATGAAGGTGTAGAGGGAACATATTCAGGCCCAACCCTGGCCCCAGCTCCTGAAGAGCACTaGGCCAGGGCAGCCGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSWYEGVEGTYSGPTLAPAPEEH*ARAAAW Trigger: CCACGCGGCTGCCCTGGCCAAGTGCTCTTCAGGAGC...TGGGGCCAGGGTTGGGCCTGAATATGTTCCCTCTACACCTTCATACCAAGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CAA 90 bp | CAAGCACGCGCTCGGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTGGGGATGCCTCGTTATaGGCAGAGGAGGTCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QARAREARGRQREFLCYTGDASL*AEEVTA Trigger: GGCTGTGACCTCCTCTGCCAATAACGAGGCATCCCC...AGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCCGAGCGCGTGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS GCA 90 bp | TCATCCACAGACTCAAATACCTGTGTGCTGCTGCTGGAGTCGCTCTaGAGTCGGAGGTTCTGGCGGCCTGAGCTGCAGCTCTGGGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSTDSNTCVLLLESL*SRRFWRPELQLWDD Trigger: GTCATCCCAGAGCTGCAGCTCAGGCCGCCAGAACCTCCGACTGCAGAGCGACTCCAGCAGCAGCACACAGGTATTTGAGTCTGTGGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS CCA 90 bp | GCTCCGGGTAGGTCGTGCTGTCCTGGATGTATTTTTCCCAGATGCTaGCTGTCAACCCTTGCCCAGCGTCACAGGGCAGGTCTGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: APGRSCCPGCIFPRC*LSTLAQRHRAGLET Trigger: TGTCTCCAGACCTGCCCTGTGACGCTGGGCAAGGGTTGACAGCCAGCATCTGGGAAAAATACATCCAGGACAGCACGACCTACCCGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112325.8 ENSMUST00000154248.8 |
||
| CDS CCA 90 bp | AATACCTGTGTGCTGCTGCTGGAGTCGCTCTGCAGTCGGAGGTTCTaGCGGCCTGAGCTGCAGCTCTGGGATGACTCATTGCTGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NTCVLLLESLCSRRF*RPELQLWDDSLLMV Trigger: CACCATCAGCAATGAGTCATCCCAGAGCTGCAGCTCAGGCCGCCAGAACCTCCGACTGCAGAGCGACTCCAGCAGCAGCACACAGGTATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS CCA 90 bp | AGGTTAGGCAGCTTCGGCAGCTTCCGCACGTTCTCTTGCAGGCCCTaGATCTGGTTTCGCGCGCTCTCAATGAGTTGCTCCAGTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLGSFGSFRTFSCRP*IWFRALSMSCSSSW Trigger: CCAGGAACTGGAGCAACTCATTGAGAGCGCGCGAAACCAGATCCAGGGCCTGCAAGAGAACGTGCGGAAGCTGCCGAAGCTGCCTAACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
||
| CDS-3UTR CAA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCAGCAGGTGCCCGCCCTaGGGGAAGCGGAAGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: INFYLMAFLTHTLGSRGTSRCPP*GKRKGG Trigger: GCCACCCTTCCGCTTCCCCAAGGGCGGGCACCTGCT...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CAA 90 bp | GTCTTGATTGCCCCCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGGTTACAGCCATTGGTaGAGCCGCCGTCAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLIAPRGCRSWGQASAMCGYSHW*SRRQLS Trigger: GCTCAGCTGACGGCGGCTCAACCAATGGCTGTAACC...ACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAATCAAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTGGTCAGAGCTGGAAGGCTGCGTaGGGCATCCAAGACGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRHEGGRGNSCAILHTGQSWKAA*GIQDAV Trigger: GACAGCGTCTTGGATGCCCAACGCAGCCTTCCAGCT...CTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CAA 90 bp | CATACTGGTCCACAGACACCAGGACCTTGTGCTGGGCTGAAGGAAGGGGTGGGGAGAATCTGCTTGGCGTaGTGCCGCTCAGCCATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: HTGPQTPGPCAGLKEGVGRICLA*CRSAIS Trigger: CGAAATGGCTGAGCGGCACAACGCCAAGCAGATTCT...CCCCACCCCTTCCTTCAGCCCAGCACAAGGTCCTGGTGTCTGTGGACCAGTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | GTCTTGATTGCCCCCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGCCGGAGGGAAGCCTTaGCCCACCTTCATGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLIAPRGCRSWGQASAMCAGGKP*PTFMKS Trigger: GCTCTTCATGAAGGTGGGCAAAGGCTTCCCTCCGGC...ACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGGGGGCAATCAAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR CAA 90 bp | ATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTGGGTGTGGCTCCTCCATGTCATCCCTaGGCTGAACCAGAACATTGT | + |
|
Preference number: 5 (lower is better) Translates to: MGGWGLHGLGGAFWVGVAPPCHP*AEPEHC Trigger: ACAATGTTCTGGTTCAGCCAAGGGATGACATGGAGG...AGCCACACCCACCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
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| CDS GCA 90 bp | TGGGCATCCAAGACGCTGTCTTCAGTGCTAAGACTGGGCTCAGAGTaGTCGGAGAGACCAGAGGAGAAGTTGTGGGAGGAAGGGTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: WASKTLSSVLRLGSE*SERPEEKLWEEGCP Trigger: CGGACACCCTTCCTCCCACAACTTCTCCTCTGGTCTCTCCGAGCACTCTGAGCCCAGTCTTAGCACTGAAGACAGCGTCTTGGATGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS GCA 90 bp | CCCTGGGCACTGGGAACATGCCTGGGGCGCGAGGCACTTGATAAATaGTTCTTGCAGACAACAGCAGGATGGGGGATGTGCACTCACATC | + |
|
Preference number: 5 (lower is better) Translates to: PWALGTCLGREALDK*FLQTTAGWGMCTHI Trigger: GATGTGAGTGCACATCCCCCATCCTGCTGTTGTCTGCAAGAAGCATTTATCAAGTGCCTCGCGCCCCAGGCATGTTCCCAGTGCCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS CCA 90 bp | CCAGAAGTGATCTGCAGTCTTCATCTTGGTATACTCCAGGGCACATaGCCCCACCAACAAAGAGGCCAGGATGGGTCCGTCCACCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PEVICSLHLGILQGT*PHQQRGQDGSVHRV Trigger: GACCCGGTGGACGGACCCATCCTGGCCTCTTTGTTGGTGGGGCCATGTGCCCTGGAGTATACCAAGATGAAGACTGCAGATCACTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS-3UTR CAA 90 bp | GAAGGACAACAGAGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAACTCTGGGATGACTCATaGCTGATGGTGGAGTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EGQQSQRLPRPTHNPNSQLWDDS*LMVESR Trigger: CCGGGACTCCACCATCAGCAATGAGTCATCCCAGAG...TTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCTCTGTTGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CAA 90 bp | TACCACCGCAGATGGGAGGGTGGGGCTTGCATGGATTGGGCGGGGCTTTCTGGGTCTGCAGTCTTCATCTaGGTATACTCCAGGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: YHRRWEGGACMDWAGLSGSAVFI*VYSRAH Trigger: ATGTGCCCTGGAGTATACCAAGATGAAGACTGCAGA...CCCAGAAAGCCCCGCCCAATCCATGCAAGCCCCACCCTCCCATCTGCGGTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112325.8 |
||
| CDS TCA 90 bp | CCATTAGGTCCTGGGGCACGAATTCAGACTGCGTGCCAGGGTAGATaGTGCGGAACACGTAATCCGTGGCTTCGTCGTCCTCCTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLGPGARIQTACQGR*CGTRNPWLRRPPCL Trigger: CAGACAAGGAGGACGACGAAGCCACGGATTACGTGTTCCGCATCATCTACCCTGGCACGCAGTCTGAATTCGTGCCCCAGGACCTAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 |
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| CDS GCA 90 bp | CTGTCCTCGTGGACGAACTTTCTGGTAACGGCTTCTTCCATGATCTaGTTCACCTCCTTCTTCACAGTGCGCAGCAGCCTCTGGCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSWTNFLVTASSMI*FTSFFTVRSSLWRV Trigger: GACCCGCCAGAGGCTGCTGCGCACTGTGAAGAAGGAGGTGAAGCAGATCATGGAAGAAGCCGTTACCAGAAAGTTCGTCCACGAGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
||
| CDS CCA 90 bp | GCTCGAAGAGCTCGGAGTCCAGGATCTGGATCAGAGACCTCATGTTaGCGAAGTGCGTATCCATGGCGCCTCCATGGGGGAAGTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ARRARSPGSGSETSC*RSAYPWRLHGGSFG Trigger: ACCAAAACTTCCCCCATGGAGGCGCCATGGATACGCACTTCGCCAACATGAGGTCTCTGATCCAGATCCTGGACTCCGAGCTCTTCGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CAA 90 bp | ACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGTCAAAGGGGAGCAAGTGCCGTaGGCTGGGTTCCCATTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TPTPKKGGYPRLGQSLVKGEQVP*AGFPLG Trigger: CCCCAATGGGAACCCAGCCAACGGCACTTGCTCCCC...TTTGACCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | AGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGAAAGGGGGATATCCTCCAAGCTCTCGTaGGCAAGGAGGTCACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQRLPRPTHNPNSQERGISSKLS*ARRSLS Trigger: TGAGAGTGACCTCCTTGCCAACGAGAGCTTGGAGGA...TATCCCCCTTTCTTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS GCA 90 bp | AGCTCGGAGTCCAGGATCTGGATCAGAGACCTCATGTTGGCGAAGTaGGTATCCATGGCGCCTCCATGGGGGAAGTTTTGGTTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSESRIWIRDLMLAK*VSMAPPWGKFWFIL Trigger: GAGGATGAACCAAAACTTCCCCCATGGAGGCGCCATGGATACGCACTTCGCCAACATGAGGTCTCTGATCCAGATCCTGGACTCCGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CCA 90 bp | TATCACACAGCAGTTTCAGTGGGGCCCTCTCATGGTTACAGCCATTaGTTGAGCCGCCGTCAGCTGAGCCGCTTTGTGAACAGGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YHTAVSVGPSHGYSH*LSRRQLSRFVNRKS Trigger: GCTCTTCCTGTTCACAAAGCGGCTCAGCTGACGGCGGCTCAACCAATGGCTGTAACCATGAGAGGGCCCCACTGAAACTGCTGTGTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS-3UTR CAA 90 bp | CACCTACAGGATGCCTTTTCTAAAGAGAGTCTCCTGGCAGCGGATAGAGAAAAGGCTGGCTGTCAACCCTaGCCCAGCGTCACAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLQDAFSKESLLAADREKAGCQP*PSVTGQ Trigger: CTGCCCTGTGACGCTGGGCAAGGGTTGACAGCCAGC...CTTTTCTCTATCCGCTGCCAGGAGACTCTCTTTAGAAAAGGCATCCTGTAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | CCAGAGGCTGCAGGTCCTGGGGACAAGCTTCTGCTATGTGTGCTCATTTCTGCTCCACTCCGACATGGTTaGTGCGTAGCAGGCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PEAAGPGDKLLLCVLISAPLRHG*CVAGMD Trigger: ATCCATGCCTGCTACGCACAAACCATGTCGGAGTGG...AGCAGAAATGAGCACACATAGCAGAAGCTTGTCCCCAGGACCTGCAGCCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | AGGTCTTGGTATGAAGGTGTAGAGGGAACATATTCAGGCCCAACCCTGGCCCCACTCTGGGATGACTCATaGCTGATGGTGGAGTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RSWYEGVEGTYSGPTLAPLWDDS*LMVESR Trigger: CCGGGACTCCACCATCAGCAATGAGTCATCCCAGAG...TGGGGCCAGGGTTGGGCCTGAATATGTTCCCTCTACACCTTCATACCAAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | ATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGGACCAGCTGGAAGGCTGCGTaGGGCATCCAAGACGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: INFYLMAFLTHTLGSRGTSWKAA*GIQDAV Trigger: GACAGCGTCTTGGATGCCCAACGCAGCCTTCCAGCT...GGTCCCCCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | AGCTCCGGACCTGGCTGTGCTAAAATACCAACCTCTGCACCAGCAAAATCAACTAAGAGCGCCGCGATCTaGTTGCTTCGCAGGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSGPGCAKIPTSAPAKSTKSAAI*LLRRKP Trigger: CGGCTTCCTGCGAAGCAACAAGATCGCGGCGCTCTT...AGTTGATTTTGCTGGTGCAGAGGTTGGTATTTTAGCACAGCCAGGTCCGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
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| CDS-3UTR CAA 90 bp | AGGGACAGGGAAGTAGGAGGAACCAAGGACTCCTGGGCTCACCCTAGGCCTGTCCTTGATAAATGCTTCTaGCAGACAACAGCAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RDREVGGTKDSWAHPRPVLDKCF*QTTAGW Trigger: CCATCCTGCTGTTGTCTGCAAGAAGCATTTATCAAG...GACAGGCCTAGGGTGAGCCCAGGAGTCCTTGGTTCCTCCTACTTCCCTGTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS GCA 90 bp | CTGTCTCACGATAGCTTCACAGCCCAGCCACTCCGACATGGTTTGTaGGTAGCAGGCATGGATCTGTTCGTCTACCTCTTTCCTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSHDSFTAQPLRHGL*VAGMDLFVYLFPLH Trigger: ATGGAGAGGAAAGAGGTAGACGAACAGATCCATGCCTGCTACGCACAAACCATGTCGGAGTGGCTGGGCTGTGAAGCTATCGTGAGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 90 bp | CACTGGGAACATGCCTGGGGCGCGAGGCACTTGATAAATGCTTCTTaGAGACAACAGCAGGATGGGGGATGTGCACTCACATCCATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HWEHAWGARHLINAS*RQQQDGGCALTSIE Trigger: TTCTATGGATGTGAGTGCACATCCCCCATCCTGCTGTTGTCTGCAAGAAGCATTTATCAAGTGCCTCGCGCCCCAGGCATGTTCCCAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS CCA 90 bp | CATCCCTTGGCTGAACCAGAACATTGTTCTTTCCATAGAGCAGGGTaGCCCTGGAGTTCTGGTGCAGAGATTCTACATAGTCCCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HPLAEPEHCSFHRAG*PWSSGAEILHSPGQ Trigger: CTGCCCGGGACTATGTAGAATCTCTGCACCAGAACTCCAGGGCCACCCTGCTCTATGGAAAGAACAATGTTCTGGTTCAGCCAAGGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS-3UTR CAA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTGCTGGCTGTCAACCCTaGCCCAGCGTCACAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RYPLQLLQATYPLYKILLAGCQP*PSVTGQ Trigger: CTGCCCTGTGACGCTGGGCAAGGGTTGACAGCCAGC...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | TCACAACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGCCACTCCGACATGGTTaGTGCGTAGCAGGCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SQPQLPRKGDIPDLGNLWPLRHG*CVAGMD Trigger: ATCCATGCCTGCTACGCACAAACCATGTCGGAGTGG...CCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGTTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | TCACAACCCCAACTCCCAAGAAAGGGGGATATCCCAGACTTGGGCAATCTTTGGTCCTCCAAGCTCTCGTaGGCAAGGAGGTCACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQPQLPRKGDIPDLGNLWSSKLS*ARRSLS Trigger: TGAGAGTGACCTCCTTGCCAACGAGAGCTTGGAGGA...CCAAAGATTGCCCAAGTCTGGGATATCCCCCTTTCTTGGGAGTTGGGGTTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | AGCTCCGGACCTGGCTGTGCTAAAATACCAACCTCTGCACCAGCAAAATCAACTGGCTCTTCTGAGAGGTaGTCCTCACTGTCAGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSGPGCAKIPTSAPAKSTGSSER*SSLSAR Trigger: TCGGGCTGACAGTGAGGACAACCTCTCAGAAGAGCC...AGTTGATTTTGCTGGTGCAGAGGTTGGTATTTTAGCACAGCCAGGTCCGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACTCCAGTTCCTGGACCTaGCGGCTCAGCTCCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TNLCTSKINFYLMAFLTHSSSWT*RLSSSA Trigger: GGCCGAGGAGCTGAGCCGCAAGGTCCAGGAACTGGA...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
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| CDS-3UTR CAA 90 bp | ACAAGTGGGCTGAAGCAGCATCAGTCTTCCATGGACACTACAGAGCTCTCTCTGCGCGCTCTCAATGAGTaGCTCCAGTTCCTGGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: TSGLKQHQSSMDTTELSLRALNE*LQFLDL Trigger: AAGGTCCAGGAACTGGAGCAACTCATTGAGAGCGCG...CAGAGAGAGCTCTGTAGTGTCCATGGAAGACTGATGCTGCTTCAGCCCACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
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| CDS-3UTR CAA 90 bp | GGGAGGCACGAGGGAGGCAGAGGGAATTCTTGTGCTATACTCCACACTGGTCAGCATAGGGGTGGAAGGTaGTTCATAGAGACATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: GRHEGGRGNSCAILHTGQHRGGR*FIETSI Trigger: AATGGATGTCTCTATGAACAACCTTCCACCCCTATG...CTGACCAGTGTGGAGTATAGCACAAGAATTCCCTCTGCCTCCCTCGTGCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | CACCTACAGGATGCCTTTTCTAAAGAGAGTCTCCTGGCAGCGGATAGAGAAAAGGGCTCTTCTGAGAGGTaGTCCTCACTGTCAGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: HLQDAFSKESLLAADREKGSSER*SSLSAR Trigger: TCGGGCTGACAGTGAGGACAACCTCTCAGAAGAGCC...CTTTTCTCTATCCGCTGCCAGGAGACTCTCTTTAGAAAAGGCATCCTGTAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS GCA 90 bp | GGGATTTTGGGATGTTTTTCTTCTGACCTGCCTTCTGCCTCTGTCTaGTCCACCTCATCCACAGACTCAAATACCTGTGTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GILGCFSSDLPSASV*STSSTDSNTCVLLL Trigger: CAGCAGCAGCACACAGGTATTTGAGTCTGTGGATGAGGTGGAGCAGACAGAGGCAGAAGGCAGGTCAGAAGAAAAACATCCCAAAATCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS-3UTR CAA 90 bp | AGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGGGTTACAGCCATTGGTaGAGCCGCCGTCAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKINFYLMAFLTHTLGSRGYSHW*SRRQLS Trigger: GCTCAGCTGACGGCGGCTCAACCAATGGCTGTAACC...CCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CAA 90 bp | AGCCAGAGGCTACCTCGACCCACTCACAACCCCAACTCCCAAGAAAGGGGGATATCAGTGAAGTCCATATaGTTCTCCAGGATGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQRLPRPTHNPNSQERGISVKSI*FSRMMS Trigger: AGACATCATCCTGGAGAACAATATGGACTTCACTGA...TATCCCCCTTTCTTGGGAGTTGGGGTTGTGAGTGGGTCGAGGTAGCCTCTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS CCA 90 bp | CCACTTGTTGATGGCAGTGCAGGTAAACTATCTCCTCTAAGCGGATaGTCACAGCGTAGTCCCAGTAGACACTCTTCTCGTAGTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLVDGSAGKLSPLSG*SQRSPSRHSSRSPD Trigger: ATCTGGACTACGAGAAGAGTGTCTACTGGGACTACGCTGTGACCATCCGCTTAGAGGAGATAGTTTACCTGCACTGCCATCAACAAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS-3UTR CAA 90 bp | ACCAACCTCTGCACCAGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACAGAATCTGCTTGGCGTaGTGCCGCTCAGCCATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: TNLCTSKINFYLMAFLTHRICLA*CRSAIS Trigger: CGAAATGGCTGAGCGGCACAACGCCAAGCAGATTCT...GTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCTGGTGCAGAGGTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS-3UTR CAA 90 bp | CACCTACAGGATGCCTTTTCTAAAGAGAGTCTCCTGGCAGCGGATAGAGAAAAGTCTGCAGTCTTCATCTaGGTATACTCCAGGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: HLQDAFSKESLLAADREKSAVFI*VYSRAH Trigger: ATGTGCCCTGGAGTATACCAAGATGAAGACTGCAGA...CTTTTCTCTATCCGCTGCCAGGAGACTCTCTTTAGAAAAGGCATCCTGTAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR CAA 90 bp | AGGTACCCTCTGCAGCTGCTTCAAGCCACGTATCCTCTTTATAAAATCCTACTTCCTCCATGTCATCCCTaGGCTGAACCAGAACATTGT | + |
|
Preference number: 5 (lower is better) Translates to: RYPLQLLQATYPLYKILLPPCHP*AEPEHC Trigger: ACAATGTTCTGGTTCAGCCAAGGGATGACATGGAGG...AAGTAGGATTTTATAAAGAGGATACGTGGCTTGAAGCAGCTGCAGAGGGTACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048112.13 |
||
| CDS-3UTR CAA 90 bp | AGCAAAATCAACTTTTATCTGATGGCCTTTCTTACCCACACCTTGGGAAGCAGGTCAGTGAAGTCCATATaGTTCTCCAGGATGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKINFYLMAFLTHTLGSRSVKSI*FSRMMS Trigger: AGACATCATCCTGGAGAACAATATGGACTTCACTGA...CCTGCTTCCCAAGGTGTGGGTAAGAAAGGCCATCAGATAAAAGTTGATTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS GCA 72 bp | CCCGAGGGGCCTCGTCCCGGGATGTGGTGGCTTCGCTaGTCTGCCCATCTTCCACGCTGCTGTCCCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PEGPRPGMWWLR*SAHLPRCCPQA Trigger: GGCCTGGGGACAGCAGCGTGGAAGATGGGCAGAGCAGCGAAGCCACCACATCCCGGGACGAGGCCCCTCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS CCA 72 bp | CGGCCAGCTCCTCCCGAGGGGCCTCGTCCCGGGATGTaGTGGCTTCGCTGCTCTGCCCATCTTCCACGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RPAPPEGPRPGM*WLRCSAHLPRC Trigger: GCAGCGTGGAAGATGGGCAGAGCAGCGAAGCCACCACATCCCGGGACGAGGCCCCTCGGGAGGAGCTGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS CAA 90 bp | GCCGGAGGGAAGCCTTTGCCCACCTTCATGAAGAGCGCCGCGATCTaGTTGCTTCGCAGGAAGCCGGCCGCCCTCCGCCGCAGCCCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AGGKPLPTFMKSAAI*LLRRKPAALRRSPC Trigger: GCACGGGCTGCGGCGGAGGGCGGCCGGCTTCCTGCGAAGCAACAAGATCGCGGCGCTCTTCATGAAGGTGGGCAAAGGCTTCCCTCCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
||
| CDS GCA 72 bp | GGGGCCTCGTCCCGGGATGTGGTGGCTTCGCTGCTCTaGCCATCTTCCACGCTGCTGTCCCCAGGCCGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GASSRDVVASLL*PSSTLLSPGRN Trigger: GTTTCGGCCTGGGGACAGCAGCGTGGAAGATGGGCAGAGCAGCGAAGCCACCACATCCCGGGACGAGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CCA 72 bp | CCAGCTCCTCCCGAGGGGCCTCGTCCCGGGATGTGGTaGCTTCGCTGCTCTGCCCATCTTCCACGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PAPPEGPRPGMW*LRCSAHLPRCC Trigger: ACAGCAGCGTGGAAGATGGGCAGAGCAGCGAAGCCACCACATCCCGGGACGAGGCCCCTCGGGAGGAGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CCA 72 bp | GAGTGCCTGCCACGAGCACCTTCGTCCGCTTTGCCCTaGGCACTGGGAACATGCCTGGGGCGCGAGGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: ECLPRAPSSALP*ALGTCLGREAL Trigger: AAGTGCCTCGCGCCCCAGGCATGTTCCCAGTGCCCAGGGCAAAGCGGACGAAGGTGCTCGTGGCAGGCACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS GCA 72 bp | CTCTCGTTGGCAAGGAGGTCACTCTCAAGGCTATCTTaGACGGCCAGCTCCTCCCGAGGGGCCTCGTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LSLARRSLSRLS*TASSSRGASSR Trigger: CCGGGACGAGGCCCCTCGGGAGGAGCTGGCCGTGCAAGATAGCCTTGAGAGTGACCTCCTTGCCAACGAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CAA 72 bp | AAGCCTTTGCCCACCTTCATGAAGAGCGCCGCGATCTaGTTGCTTCGCAGGAAGCCGGCCGCCCTCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: KPLPTFMKSAAI*LLRRKPAALRR Trigger: GCGGCGGAGGGCGGCCGGCTTCCTGCGAAGCAACAAGATCGCGGCGCTCTTCATGAAGGTGGGCAAAGGCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 72 bp | ACCCTCTCGAACAGGGCGGTGCGGATCCACAGGTGCTaGATGGCCAGCGGGGACAGGTTAGGCAGCTTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: TLSNRAVRIHRC*MASGDRLGSFG Trigger: GCCGAAGCTGCCTAACCTGTCCCCGCTGGCCATCAAGCACCTGTGGATCCGCACCGCCCTGTTCGAGAGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 72 bp | TCAAAGGAGTGCCTGCCACGAGCACCTTCGTCCGCTTaGCCCTGGGCACTGGGAACATGCCTGGGGCGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SKECLPRAPSSA*PWALGTCLGRE Trigger: CTCGCGCCCCAGGCATGTTCCCAGTGCCCAGGGCAAAGCGGACGAAGGTGCTCGTGGCAGGCACTCCTTTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS CAA 90 bp | TCAGGCTCTTCTGAGAGGTTGTCCTCACTGTCAGCCCGACTGGGCTaGTCCGCCTCACCGGGCCAGCCGTCCATCACCGCGCCATCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SGSSERLSSLSARLG*SASPGQPSITAPSF Trigger: GAAGGATGGCGCGGTGATGGACGGCTGGCCCGGTGAGGCGGACAAGCCCAGTCGGGCTGACAGTGAGGACAACCTCTCAGAAGAGCCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CAA 90 bp | GCCAGGGCAGGGAACAGGCTCTCCATCTCAGGCTCTTCTGAGAGGTaGTCCTCACTGTCAGCCCGACTGGGCTTGTCCGCCTCACCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ARAGNRLSISGSSER*SSLSARLGLSASPG Trigger: GCCCGGTGAGGCGGACAAGCCCAGTCGGGCTGACAGTGAGGACAACCTCTCAGAAGAGCCTGAGATGGAGAGCCTGTTCCCTGCCCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CAA 90 bp | TTGTCCAGGACCCTCTCGAACAGGGCGGTGCGGATCCACAGGTGCTaGATGGCCAGCGGGGACAGGTTAGGCAGCTTCGGCAGCTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LSRTLSNRAVRIHRC*MASGDRLGSFGSFR Trigger: GCGGAAGCTGCCGAAGCTGCCTAACCTGTCCCCGCTGGCCATCAAGCACCTGTGGATCCGCACCGCCCTGTTCGAGAGGGTCCTGGACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 90 bp | CCTGTCCCCTCAAAGGAGTGCCTGCCACGAGCACCTTCGTCCGCTTaGCCCTGGGCACTGGGAACATGCCTGGGGCGCGAGGCACTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PVPSKECLPRAPSSA*PWALGTCLGREALD Trigger: ATCAAGTGCCTCGCGCCCCAGGCATGTTCCCAGTGCCCAGGGCAAAGCGGACGAAGGTGCTCGTGGCAGGCACTCCTTTGAGGGGACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS TCA 72 bp | AGGCAGGGCCAATGGACACAGGCCGGGGGCTGCCCATaGGGTCAAGGGCAACGAATTCAGACTGCGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RQGQWTQAGGCP*GQGQRIQTACQ Trigger: CTGGCACGCAGTCTGAATTCGTTGCCCTTGACCTCATGGGCAGCCCCCGGCCTGTGTCCATTGGCCCTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154248.8 |
||
| CDS CCA 72 bp | GCTCTTCTGAGAGGTTGTCCTCACTGTCAGCCCGACTaGGCTTGTCCGCCTCACCGGGCCAGCCGTCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: ALLRGCPHCQPD*ACPPHRASRPS Trigger: TGATGGACGGCTGGCCCGGTGAGGCGGACAAGCCCAGTCGGGCTGACAGTGAGGACAACCTCTCAGAAGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CCA 72 bp | TTTGTGCCCACTGGAGCCCCTTGGCCACCACTAGCATaGACTGGCCCGCAGCAAGCATCATCCAGGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FVPTGAPWPPLA*TGPQQASSRQG Trigger: GCCCTGCCTGGATGATGCTTGCTGCGGGCCAGTCCATGCTAGTGGTGGCCAAGGGGCTCCAGTGGGCACAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154248.8 |
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| CDS CAA 72 bp | CGCGCGCTCTCAATGAGTTGCTCCAGTTCCTGGACCTaGCGGCTCAGCTCCTCGGCCGGAGGGAAGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RALSMSCSSSWT*RLSSSAGGKPL Trigger: CAAAGGCTTCCCTCCGGCCGAGGAGCTGAGCCGCAAGGTCCAGGAACTGGAGCAACTCATTGAGAGCGCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 90 bp | CTCCTCCAAGCTCTCGTTGGCAAGGAGGTCACTCTCAAGGCTATCTaGCACGGCCAGCTCCTCCCGAGGGGCCTCGTCCCGGGATGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLQALVGKEVTLKAI*HGQLLPRGLVPGCG Trigger: ACCACATCCCGGGACGAGGCCCCTCGGGAGGAGCTGGCCGTGCAAGATAGCCTTGAGAGTGACCTCCTTGCCAACGAGAGCTTGGAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CAA 90 bp | GTTCTCTTGCAGGCCCTGGATCTGGTTTCGCGCGCTCTCAATGAGTaGCTCCAGTTCCTGGACCTTGCGGCTCAGCTCCTCGGCCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VLLQALDLVSRALNE*LQFLDLAAQLLGRR Trigger: CCTCCGGCCGAGGAGCTGAGCCGCAAGGTCCAGGAACTGGAGCAACTCATTGAGAGCGCGCGAAACCAGATCCAGGGCCTGCAAGAGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS TCA 72 bp | GGCGGCCTGAGCTGCAGCTCTGGGATGACTCATTGCTaGTGGTGGAGTCCCGGTGCAGCATCCGGTGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGLSCSSGMTHC*WWSPGAASGEG Trigger: ACCTTCACCGGATGCTGCACCGGGACTCCACCATCAGCAATGAGTCATCCCAGAGCTGCAGCTCAGGCCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112325.8 |
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| CDS GCA 72 bp | ATGTGGTGGCTTCGCTGCTCTGCCCATCTTCCACGCTaGTGTCCCCAGGCCGAAACACAGCTGGAAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: MWWLRCSAHLPR*CPQAETQLEGC Trigger: GCAGCCTTCCAGCTGTGTTTCGGCCTGGGGACAGCAGCGTGGAAGATGGGCAGAGCAGCGAAGCCACCACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CCA 72 bp | AATCCGTGGCTTCGTCGTCCTCCTTGTCTGAAGACGTaGACTCGGAGGACCCCTGTGGGCTGCGCTTGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: NPWLRRPPCLKT*TRRTPVGCACA Trigger: TGCGCAAGCGCAGCCCACAGGGGTCCTCCGAGTCCACGTCTTCAGACAAGGAGGACGACGAAGCCACGGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CCA 72 bp | GTGCTGCTGCTGGAGTCGCTCTGCAGTCGGAGGTTCTaGCGGCCTGAGCTGCAGCTCTGGGATGACTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: VLLLESLCSRRF*RPELQLWDDSL Trigger: CAATGAGTCATCCCAGAGCTGCAGCTCAGGCCGCCAGAACCTCCGACTGCAGAGCGACTCCAGCAGCAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112325.8 |
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| CDS CAA 90 bp | CAGCGGGGACAGGTTAGGCAGCTTCGGCAGCTTCCGCACGTTCTCTaGCAGGCCCTGGATCTGGTTTCGCGCGCTCTCAATGAGTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QRGQVRQLRQLPHVL*QALDLVSRALNELL Trigger: GAGCAACTCATTGAGAGCGCGCGAAACCAGATCCAGGGCCTGCAAGAGAACGTGCGGAAGCTGCCGAAGCTGCCTAACCTGTCCCCGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS TCA 72 bp | GCGCAACTTAGGAAATACCTTCCCCTTTCCTCGCTGTaGCCAAAGCGGCGGGTCCAGCTGCCCGTGCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AQLRKYLPLSSL*PKRRVQLPVRK Trigger: CTTCCGCACGGGCAGCTGGACCCGCCGCTTTGGTCACAGCGAGGAAAGGGGAAGGTATTTCCTAAGTTGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS TCA 72 bp | GAACACGTAATCCGTGGCTTCGTCGTCCTCCTTGTCTaGAGACGTGGACTCGGAGGACCCCTGTGGGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: EHVIRGFVVLLV*RRGLGGPLWAA Trigger: CGCAGCCCACAGGGGTCCTCCGAGTCCACGTCTTCAGACAAGGAGGACGACGAAGCCACGGATTACGTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 72 bp | GACTCAAATACCTGTGTGCTGCTGCTGGAGTCGCTCTaGAGTCGGAGGTTCTGGCGGCCTGAGCTGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DSNTCVLLLESL*SRRFWRPELQL Trigger: GAGCTGCAGCTCAGGCCGCCAGAACCTCCGACTGCAGAGCGACTCCAGCAGCAGCACACAGGTATTTGAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CCA 72 bp | AGAGGAGAAGTTGTGGGAGGAAGGGTGTCCGGAGTCTaGGGAGCAAGTGCCGTTGGCTGGGTTCCCATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGEVVGGRVSGV*GASAVGWVPIG Trigger: CCCAATGGGAACCCAGCCAACGGCACTTGCTCCCCAGACTCCGGACACCCTTCCTCCCACAACTTCTCCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CAA 72 bp | GGGAACAGGCTCTCCATCTCAGGCTCTTCTGAGAGGTaGTCCTCACTGTCAGCCCGACTGGGCTTGTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GNRLSISGSSER*SSLSARLGLSA Trigger: GGCGGACAAGCCCAGTCGGGCTGACAGTGAGGACAACCTCTCAGAAGAGCCTGAGATGGAGAGCCTGTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS TCA 72 bp | CAGGGCAGGGAACAGGCTCTCCATCTCAGGCTCTTCTaGGAGGTTGTCCTCACTGTCAGCCCGACTGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QGREQALHLRLF*EVVLTVSPTGL Trigger: AAGCCCAGTCGGGCTGACAGTGAGGACAACCTCTCAGAAGAGCCTGAGATGGAGAGCCTGTTCCCTGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS TCA 72 bp | CTTGCAGGCCCTGGATCTGGTTTCGCGCGCTCTCAATaGGTTGCTCCAGTTCCTGGACCTTGCGGCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LAGPGSGFARSQ*VAPVPGPCGSA Trigger: AGCTGAGCCGCAAGGTCCAGGAACTGGAGCAACTCATTGAGAGCGCGCGAAACCAGATCCAGGGCCTGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 72 bp | AGGTTAGGCAGCTTCGGCAGCTTCCGCACGTTCTCTTaGAGGCCCTGGATCTGGTTTCGCGCGCTCTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: RLGSFGSFRTFS*RPWIWFRALSM Trigger: CATTGAGAGCGCGCGAAACCAGATCCAGGGCCTGCAAGAGAACGTGCGGAAGCTGCCGAAGCTGCCTAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 72 bp | GAGATAGATGGCCGGTCGTCCATGCTGCCACTGGAATaGCTCTTCTGGATACAGAGCGCTGGCCGCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EIDGRSSMLPLE*LFWIQSAGRLV Trigger: CACCAAGCGGCCAGCGCTCTGTATCCAGAAGAGGCATTCCAGTGGCAGCATGGACGACCGGCCATCTATCTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 72 bp | GCACCTTCGTCCGCTTTGCCCTGGGCACTGGGAACATaGCTGGGGCGCGAGGCACTTGATAAATGCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: APSSALPWALGT*LGREALDKCFL Trigger: CAAGAAGCATTTATCAAGTGCCTCGCGCCCCAGGCATGTTCCCAGTGCCCAGGGCAAAGCGGACGAAGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS CCA 72 bp | ATCTTCCACGCTGCTGTCCCCAGGCCGAAACACAGCTaGAAGGCTGCGTTGGGCATCCAAGACGCTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IFHAAVPRPKHS*KAALGIQDAVF Trigger: GAAGACAGCGTCTTGGATGCCCAACGCAGCCTTCCAGCTGTGTTTCGGCCTGGGGACAGCAGCGTGGAAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CCA 72 bp | GCTCGGAGTCCAGGATCTGGATCAGAGACCTCATGTTaGCGAAGTGCGTATCCATGGCGCCTCCATGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ARSPGSGSETSC*RSAYPWRLHGG Trigger: TCCCCCATGGAGGCGCCATGGATACGCACTTCGCCAACATGAGGTCTCTGATCCAGATCCTGGACTCCGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CCA 72 bp | AGCTTCGGCAGCTTCCGCACGTTCTCTTGCAGGCCCTaGATCTGGTTTCGCGCGCTCTCAATGAGTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SFGSFRTFSCRP*IWFRALSMSCS Trigger: GGAGCAACTCATTGAGAGCGCGCGAAACCAGATCCAGGGCCTGCAAGAGAACGTGCGGAAGCTGCCGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 72 bp | AGCTCGGAGTCCAGGATCTGGATCAGAGACCTCATGTaGGCGAAGTGCGTATCCATGGCGCCTCCATGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSESRIWIRDLM*AKCVSMAPPWG Trigger: CCCCCATGGAGGCGCCATGGATACGCACTTCGCCAACATGAGGTCTCTGATCCAGATCCTGGACTCCGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CAA 72 bp | CAGGTTAGGCAGCTTCGGCAGCTTCCGCACGTTCTCTaGCAGGCCCTGGATCTGGTTTCGCGCGCTCTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: QVRQLRQLPHVL*QALDLVSRALN Trigger: ATTGAGAGCGCGCGAAACCAGATCCAGGGCCTGCAAGAGAACGTGCGGAAGCTGCCGAAGCTGCCTAACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 90 bp | TTCCACGCTGCTGTCCCCAGGCCGAAACACAGCTGGAAGGCTGCGTaGGGCATCCAAGACGCTGTCTTCAGTGCTAAGACTGGGCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FHAAVPRPKHSWKAA*GIQDAVFSAKTGLR Trigger: TCTGAGCCCAGTCTTAGCACTGAAGACAGCGTCTTGGATGCCCAACGCAGCCTTCCAGCTGTGTTTCGGCCTGGGGACAGCAGCGTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CAA 90 bp | CACACAGCAGTTTCAGTGGGGCCCTCTCATGGTTACAGCCATTGGTaGAGCCGCCGTCAGCTGAGCCGCTTTGTGAACAGGAAGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HTAVSVGPSHGYSHW*SRRQLSRFVNRKSR Trigger: CCTGCTCTTCCTGTTCACAAAGCGGCTCAGCTGACGGCGGCTCAACCAATGGCTGTAACCATGAGAGGGCCCCACTGAAACTGCTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 90 bp | ACGTCCAGGCTGCCAGGGATAGACATGAACTCCTCCAAGCTCTCGTaGGCAAGGAGGTCACTCTCAAGGCTATCTTGCACGGCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSRLPGIDMNSSKLS*ARRSLSRLSCTASS Trigger: GGAGCTGGCCGTGCAAGATAGCCTTGAGAGTGACCTCCTTGCCAACGAGAGCTTGGAGGAGTTCATGTCTATCCCTGGCAGCCTGGACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS TCA 72 bp | CCTGGGGCACGAATTCAGACTGCGTGCCAGGGTAGATaGTGCGGAACACGTAATCCGTGGCTTCGTCGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGARIQTACQGR*CGTRNPWLRRP Trigger: AGGACGACGAAGCCACGGATTACGTGTTCCGCATCATCTACCCTGGCACGCAGTCTGAATTCGTGCCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 |
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| CDS CCA 72 bp | GCAGTTTCAGTGGGGCCCTCTCATGGTTACAGCCATTaGTTGAGCCGCCGTCAGCTGAGCCGCTTTGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: AVSVGPSHGYSH*LSRRQLSRFVN Trigger: GTTCACAAAGCGGCTCAGCTGACGGCGGCTCAACCAATGGCTGTAACCATGAGAGGGCCCCACTGAAACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
||
| CDS CCA 72 bp | CTGTCCCCAGGCCGAAACACAGCTGGAAGGCTGCGTTaGGCATCCAAGACGCTGTCTTCAGTGCTAAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: LSPGRNTAGRLR*ASKTLSSVLRL Trigger: CAGTCTTAGCACTGAAGACAGCGTCTTGGATGCCCAACGCAGCCTTCCAGCTGTGTTTCGGCCTGGGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
||
| CDS CCA 72 bp | AATGCCTCTTCTGGATACAGAGCGCTGGCCGCTTGGTaGGCGAGTCCTGTCTCAGATGTGAGCTGTGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: NASSGYRALAAW*ASPVSDVSCGS Trigger: GGATCCACAGCTCACATCTGAGACAGGACTCGCCCACCAAGCGGCCAGCGCTCTGTATCCAGAAGAGGCATT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
||
| CDS CCA 72 bp | CTTCGTCCGCTTTGCCCTGGGCACTGGGAACATGCCTaGGGCGCGAGGCACTTGATAAATGCTTCTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRPLCPGHWEHA*GARHLINASCR Trigger: TCTGCAAGAAGCATTTATCAAGTGCCTCGCGCCCCAGGCATGTTCCCAGTGCCCAGGGCAAAGCGGACGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS CAA 72 bp | GTTTCAGTGGGGCCCTCTCATGGTTACAGCCATTGGTaGAGCCGCCGTCAGCTGAGCCGCTTTGTGAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VSVGPSHGYSHW*SRRQLSRFVNR Trigger: CCTGTTCACAAAGCGGCTCAGCTGACGGCGGCTCAACCAATGGCTGTAACCATGAGAGGGCCCCACTGAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 72 bp | CCTGGGCACTGGGAACATGCCTGGGGCGCGAGGCACTaGATAAATGCTTCTTGCAGACAACAGCAGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGHWEHAWGARH*INASCRQQQDG Trigger: CCCATCCTGCTGTTGTCTGCAAGAAGCATTTATCAAGTGCCTCGCGCCCCAGGCATGTTCCCAGTGCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
||
| CDS CAA 90 bp | TCCTTGTCTGAAGACGTGGACTCGGAGGACCCCTGTGGGCTGCGCTaGCGCAACTTAGGAAATACCTTCCCCTTTCCTCGCTGTGACCAA | + |
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Preference number: 6 (lower is better) Translates to: SLSEDVDSEDPCGLR*RNLGNTFPFPRCDQ Trigger: TTGGTCACAGCGAGGAAAGGGGAAGGTATTTCCTAAGTTGCGCAAGCGCAGCCCACAGGGGTCCTCCGAGTCCACGTCTTCAGACAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 72 bp | GGTAGGTCGTGCTGTCCTGGATGTATTTTTCCCAGATaGTGGCTGTCAACCCTTGCCCAGCGTCACAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GRSCCPGCIFPR*WLSTLAQRHRA Trigger: TGCCCTGTGACGCTGGGCAAGGGTTGACAGCCAGCATCTGGGAAAAATACATCCAGGACAGCACGACCTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 72 bp | CTGGGAACATGCCTGGGGCGCGAGGCACTTGATAAATaGTTCTTGCAGACAACAGCAGGATGGGGGATGTGC | + |
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Preference number: 6 (lower is better) Translates to: LGTCLGREALDK*FLQTTAGWGMC Trigger: GCACATCCCCCATCCTGCTGTTGTCTGCAAGAAGCATTTATCAAGTGCCTCGCGCCCCAGGCATGTTCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS CCA 72 bp | AGGTCGTGCTGTCCTGGATGTATTTTTCCCAGATGCTaGCTGTCAACCCTTGCCCAGCGTCACAGGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RSCCPGCIFPRC*LSTLAQRHRAG Trigger: ACCTGCCCTGTGACGCTGGGCAAGGGTTGACAGCCAGCATCTGGGAAAAATACATCCAGGACAGCACGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 72 bp | AGCAGTTTCAGTGGGGCCCTCTCATGGTTACAGCCATaGGTTGAGCCGCCGTCAGCTGAGCCGCTTTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: SSFSGALSWLQP*VEPPSAEPLCE Trigger: TTCACAAAGCGGCTCAGCTGACGGCGGCTCAACCAATGGCTGTAACCATGAGAGGGCCCCACTGAAACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS TCA 72 bp | CAAGGGCAACGAATTCAGACTGCGTGCCAGGGTAGATaGTGCGGAACACGTAATCCGTGGCTTCGTCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: QGQRIQTACQGR*CGTRNPWLRRP Trigger: AGGACGACGAAGCCACGGATTACGTGTTCCGCATCATCTACCCTGGCACGCAGTCTGAATTCGTTGCCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154248.8 |
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| CDS GCA 72 bp | TGGATGTATTTTTCCCAGATGCTGGCTGTCAACCCTTaGCCAGCGTCACAGGGCAGGTCTGGAGACACGATC | + |
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Preference number: 6 (lower is better) Translates to: WMYFSQMLAVNP*PASQGRSGDTI Trigger: GATCGTGTCTCCAGACCTGCCCTGTGACGCTGGGCAAGGGTTGACAGCCAGCATCTGGGAAAAATACATCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 72 bp | TCCAGGATCTGGATCAGAGACCTCATGTTGGCGAAGTaGGTATCCATGGCGCCTCCATGGGGGAAGTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: SRIWIRDLMLAK*VSMAPPWGKFW Trigger: CCAAAACTTCCCCCATGGAGGCGCCATGGATACGCACTTCGCCAACATGAGGTCTCTGATCCAGATCCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS GCA 72 bp | CATGCCTGGGGCGCGAGGCACTTGATAAATGCTTCTTaGAGACAACAGCAGGATGGGGGATGTGCACTCACA | + |
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Preference number: 6 (lower is better) Translates to: HAWGARHLINAS*RQQQDGGCALT Trigger: TGTGAGTGCACATCCCCCATCCTGCTGTTGTCTGCAAGAAGCATTTATCAAGTGCCTCGCGCCCCAGGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS CCA 72 bp | ATCTGCAGTCTTCATCTTGGTATACTCCAGGGCACATaGCCCCACCAACAAAGAGGCCAGGATGGGTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: ICSLHLGILQGT*PHQQRGQDGSV Trigger: GACGGACCCATCCTGGCCTCTTTGTTGGTGGGGCCATGTGCCCTGGAGTATACCAAGATGAAGACTGCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CCA 72 bp | GTGCAGAGATTCTACATAGTCCCGGGCAGAGATAGATaGCCGGTCGTCCATGCTGCCACTGGAATGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: VQRFYIVPGRDR*PVVHAATGMPL Trigger: AAGAGGCATTCCAGTGGCAGCATGGACGACCGGCCATCTATCTCTGCCCGGGACTATGTAGAATCTCTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 72 bp | CACGATAGCTTCACAGCCCAGCCACTCCGACATGGTTaGTGCGTAGCAGGCATGGATCTGTTCGTCTACCTC | + |
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Preference number: 6 (lower is better) Translates to: HDSFTAQPLRHG*CVAGMDLFVYL Trigger: GAGGTAGACGAACAGATCCATGCCTGCTACGCACAAACCATGTCGGAGTGGCTGGGCTGTGAAGCTATCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 72 bp | ACATGCCTGGGGCGCGAGGCACTTGATAAATGCTTCTaGCAGACAACAGCAGGATGGGGGATGTGCACTCAC | + |
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Preference number: 6 (lower is better) Translates to: TCLGREALDKCF*QTTAGWGMCTH Trigger: GTGAGTGCACATCCCCCATCCTGCTGTTGTCTGCAAGAAGCATTTATCAAGTGCCTCGCGCCCCAGGCATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS CAA 90 bp | TTATCACACAGCAGTTTCAGTGGGGCCCTCTCATGGTTACAGCCATaGGTTGAGCCGCCGTCAGCTGAGCCGCTTTGTGAACAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LSHSSFSGALSWLQP*VEPPSAEPLCEQEE Trigger: CTCTTCCTGTTCACAAAGCGGCTCAGCTGACGGCGGCTCAACCAATGGCTGTAACCATGAGAGGGCCCCACTGAAACTGCTGTGTGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 90 bp | CCTCTGTCTCACGATAGCTTCACAGCCCAGCCACTCCGACATGGTTaGTGCGTAGCAGGCATGGATCTGTTCGTCTACCTCTTTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: PLSHDSFTAQPLRHG*CVAGMDLFVYLFPL Trigger: GAGAGGAAAGAGGTAGACGAACAGATCCATGCCTGCTACGCACAAACCATGTCGGAGTGGCTGGGCTGTGAAGCTATCGTGAGACAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CAA 90 bp | GCACTGGGAACATGCCTGGGGCGCGAGGCACTTGATAAATGCTTCTaGCAGACAACAGCAGGATGGGGGATGTGCACTCACATCCATAGA | + |
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Preference number: 6 (lower is better) Translates to: ALGTCLGREALDKCF*QTTAGWGMCTHIHR Trigger: TCTATGGATGTGAGTGCACATCCCCCATCCTGCTGTTGTCTGCAAGAAGCATTTATCAAGTGCCTCGCGCCCCAGGCATGTTCCCAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS GCA 72 bp | GAACAGGAAGAGCAGGAGGACTTCCGAGGACTGGGTTaGCATAGGGGTGGAAGGTTGTTCATAGAGACATCC | + |
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Preference number: 6 (lower is better) Translates to: EQEEQEDFRGLG*HRGGRLFIETS Trigger: GGATGTCTCTATGAACAACCTTCCACCCCTATGGCAACCCAGTCCTCGGAAGTCCTCCTGCTCTTCCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 72 bp | AGGTCCCGGGCGAGCTGCAGAATCTGCTTGGCGTTGTaGCGCTCAGCCATTTCGTTGAAGAACTTGATAATG | + |
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Preference number: 6 (lower is better) Translates to: RSRASCRICLAL*RSAISLKNLIM Trigger: CATTATCAAGTTCTTCAACGAAATGGCTGAGCGGCACAACGCCAAGCAGATTCTGCAGCTCGCCCGGGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CCA 72 bp | GATGGCAGTGCAGGTAAACTATCTCCTCTAAGCGGATaGTCACAGCGTAGTCCCAGTAGACACTGGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: DGSAGKLSPLSG*SQRSPSRHWKG Trigger: CCCCTTCCAGTGTCTACTGGGACTACGCTGTGACCATCCGCTTAGAGGAGATAGTTTACCTGCACTGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057209.12 ENSMUST00000112324.2 |
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| CDS CCA 72 bp | ATGTTATCACACAGCAGTTTCAGTGGGGCCCTCTCATaGTTACAGCCATTGGTTGAGCCGCCGTCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: MLSHSSFSGALS*LQPLVEPPSAE Trigger: CTCAGCTGACGGCGGCTCAACCAATGGCTGTAACCATGAGAGGGCCCCACTGAAACTGCTGTGTGATAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 ENSMUST00000112324.2 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CCA 72 bp | GGATCAGAGACCTCATGTTGGCGAAGTGCGTATCCATaGCGCCTCCATGGGGGAAGTTTTGGTTCATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GSETSCWRSAYP*RLHGGSFGSSS Trigger: AGAGGATGAACCAAAACTTCCCCCATGGAGGCGCCATGGATACGCACTTCGCCAACATGAGGTCTCTGATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CAA 72 bp | CTGCCAGGGATAGACATGAACTCCTCCAAGCTCTCGTaGGCAAGGAGGTCACTCTCAAGGCTATCTTGCACG | + |
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Preference number: 6 (lower is better) Translates to: LPGIDMNSSKLS*ARRSLSRLSCT Trigger: CGTGCAAGATAGCCTTGAGAGTGACCTCCTTGCCAACGAGAGCTTGGAGGAGTTCATGTCTATCCCTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS CAA 72 bp | GACTTCCGAGGACTGGGTTGCCATAGGGGTGGAAGGTaGTTCATAGAGACATCCATTAGGTCCTGGGGCATG | + |
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Preference number: 6 (lower is better) Translates to: DFRGLGCHRGGR*FIETSIRSWGM Trigger: CATGCCCCAGGACCTAATGGATGTCTCTATGAACAACCTTCCACCCCTATGGCAACCCAGTCCTCGGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154248.8 |
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| CDS TCA 72 bp | TCACGGTGTACAGGTCCAGTAGTTCTGGAGAATAGGTaGCTCCACTGGAGGACACAGGGGATGCCTCGTTAT | + |
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Preference number: 6 (lower is better) Translates to: SRCTGPVVLENR*LHWRTQGMPRY Trigger: ATAACGAGGCATCCCCTGTGTCCTCCAGTGGAGTCACCTATTCTCCAGAACTACTGGACCTGTACACCGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048112.13 ENSMUST00000057209.12 |
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| CDS GCA 72 bp | TGGACGAACTTTCTGGTAACGGCTTCTTCCATGATCTaGTTCACCTCCTTCTTCACAGTGCGCAGCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: WTNFLVTASSMI*FTSFFTVRSSL Trigger: GAGGCTGCTGCGCACTGTGAAGAAGGAGGTGAAGCAGATCATGGAAGAAGCCGTTACCAGAAAGTTCGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CCA 72 bp | GATGGCAGTGCAGGTAAACTATCTCCTCTAAGCGGATaGTCACAGCGTAGTCCCAGTAGACACTCTTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: DGSAGKLSPLSG*SQRSPSRHSSR Trigger: ACGAGAAGAGTGTCTACTGGGACTACGCTGTGACCATCCGCTTAGAGGAGATAGTTTACCTGCACTGCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS CCA 72 bp | GCACTTGATAAATGCTTCTTGCAGACAACAGCAGGATaGGGGATGTGCACTCACATCCATAGAAGGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ALDKCFLQTTAG*GMCTHIHRRLW Trigger: CCAGAGCCTTCTATGGATGTGAGTGCACATCCCCCATCCTGCTGTTGTCTGCAAGAAGCATTTATCAAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112324.2 |
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| CDS CCA 72 bp | GCTGAACCAGAACATTGTTCTTTCCATAGAGCAGGGTaGCCCTGGAGTTCTGGTGCAGAGATTCTACATAGT | + |
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Preference number: 6 (lower is better) Translates to: AEPEHCSFHRAG*PWSSGAEILHS Trigger: ACTATGTAGAATCTCTGCACCAGAACTCCAGGGCCACCCTGCTCTATGGAAAGAACAATGTTCTGGTTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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| CDS GCA 72 bp | GGTCCATCAAGAGTGCCTCCTTCTCGTAGTATTTACTaGTGTTTTCCACCAGGTAGTGGACGATTTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: GPSRVPPSRSIY*CFPPGSGRFCP Trigger: TGGACAAAATCGTCCACTACCTGGTGGAAAACAGCAGTAAATACTACGAGAAGGAGGCACTCTTGATGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048112.13 ENSMUST00000112325.8 ENSMUST00000154248.8 |
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