Pregenerated sensors for SGPP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032908Ensembl transcript IDs: ENSMUST00000036172.10
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTACTGGGTCTCTGGAGCTTGGTGGGGCTTGTAACCATTGCAAACTaGGCCACAATTCCTGTCCACCCAAGACCGTGTCCCAAGTCCATG | + |
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Preference number: 1 (lower is better) Translates to: LLGLWSLVGLVTIAN*ATIPVHPRPCPKSM Trigger: CATGGACTTGGGACACGGTCTTGGGTGGACAGGAATTGTGGCCCAGTTTGCAATGGTTACAAGCCCCACCAAGCTCCAGAGACCCAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR TCA 90 bp | AAGCACACCTGTAAACCAGGGCTCCAGGCTCCCCAGCCACGGAGCTaGAATACTGTCAGCAAAACCTGGCAAGTGCTAGGCCTTTGCATT | + |
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Preference number: 1 (lower is better) Translates to: KHTCKPGLQAPQPRS*NTVSKTWQVLGLCI Trigger: AATGCAAAGGCCTAGCACTTGCCAGGTTTTGCTGACAGTATTTCAGCTCCGTGGCTGGGGAGCCTGGAGCCCTGGTTTACAGGTGTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR GCA 90 bp | ATCTGGTGCTTATTCCGAAGTGCTGAGCCCAGGGAAGGAGGTCTCTaGTGTGGGTGTCCTGCACACCTTCTTAGCTCTAAGGAGATAAGG | + |
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Preference number: 1 (lower is better) Translates to: IWCLFRSAEPREGGL*CGCPAHLLSSKEIR Trigger: CCTTATCTCCTTAGAGCTAAGAAGGTGTGCAGGACACCCACAGCAGAGACCTCCTTCCCTGGGCTCAGCACTTCGGAATAAGCACCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR GCA 90 bp | ATGACTACCACTTACTCGAACCCTTCGGGATGTCATTGCATCTGGTaGTTATTCCGAAGTGCTGAGCCCAGGGAAGGAGGTCTCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: MTTTYSNPSGCHCIW*LFRSAEPREGGLCC Trigger: ACAGCAGAGACCTCCTTCCCTGGGCTCAGCACTTCGGAATAAGCACCAGATGCAATGACATCCCGAAGGGTTCGAGTAAGTGGTAGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR TCA 90 bp | GTTAAGGGTCTTGCCTATGTCTTTTTCCAGCATAAGGTACAGGTCTaGGCAAAATGGACAGCGGCTTGGAAGGCCGGTTCTACATTGATG | + |
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Preference number: 1 (lower is better) Translates to: VKGLAYVFFQHKVQV*AKWTAAWKAGSTLM Trigger: CATCAATGTAGAACCGGCCTTCCAAGCCGCTGTCCATTTTGCTCAGACCTGTACCTTATGCTGGAAAAAGACATAGGCAAGACCCTTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR GCA 90 bp | AGTGTTTTGAAAAGAGACCCAAGAGAGACTTTACTAGGATGCCGGTaGTGCTCTGTAAGAAGTGAGTTTGGTGAATTGAGAAGGCTCACC | + |
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Preference number: 1 (lower is better) Translates to: SVLKRDPRETLLGCR*CSVRSEFGELRRLT Trigger: GGTGAGCCTTCTCAATTCACCAAACTCACTTCTTACAGAGCAGCACCGGCATCCTAGTAAAGTCTCTCTTGGGTCTCTTTTCAAAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR GCA 90 bp | GTTTTGAAAAGAGACCCAAGAGAGACTTTACTAGGATGCCGGTGCTaGTCTGTAAGAAGTGAGTTTGGTGAATTGAGAAGGCTCACCAAA | + |
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Preference number: 1 (lower is better) Translates to: VLKRDPRETLLGCRC*SVRSEFGELRRLTK Trigger: TTTGGTGAGCCTTCTCAATTCACCAAACTCACTTCTTACAGAGCAGCACCGGCATCCTAGTAAAGTCTCTCTTGGGTCTCTTTTCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR TCA 90 bp | AAGACAGTTGAAAGCTTCCAAAATAGAAACCTGAAACACGTGGTCTaGAATACCACATGCTGTGATTATCCTGGGAAGATGAGTTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: KTVESFQNRNLKHVV*NTTCCDYPGKMSCV Trigger: TACACAACTCATCTTCCCAGGATAATCACAGCATGTGGTATTTCAGACCACGTGTTTCAGGTTTCTATTTTGGAAGCTTTCAACTGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR TCA 90 bp | TCCCTCCCTTTTCTTGTATCAAGTCCATCCAAGAGTGACCAGTCATaGCAAATTCTTAGGACACTGTTTAATGTTGTGTGGCTAATATAT | + |
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Preference number: 1 (lower is better) Translates to: SLPFLVSSPSKSDQS*QILRTLFNVVWLIY Trigger: ATATATTAGCCACACAACATTAAACAGTGTCCTAAGAATTTGTCATGACTGGTCACTCTTGGATGGACTTGATACAAGAAAAGGGAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR TCA 90 bp | GTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTTGGTGTCCTTACAGGTaGATCCCACAGCAGCCGTAT | + |
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Preference number: 2 (lower is better) Translates to: VEGEAGEGRSRSVSSFPPWCPYR*IPQQPY Trigger: ATACGGCTGCTGTGGGATTCACCTGTAAGGACACCA...AGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR CCA 90 bp | GTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTACCTCAAGTCTACTaGGTCTCTGGAGCTTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: VEGEAGEGRSRSVSSFPPVPQVY*VSGAWW Trigger: CCACCAAGCTCCAGAGACCCAGTAGACTTGAGGTAC...AGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR TCA 90 bp | TTCCGAAGTGCTGAGCCCAGGGAAGGAGGTCTCTGCTGTGGGTGTCCTGCACACAGGCAAGGTTGTAACTaGAAAGACTATCCTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: FRSAEPREGGLCCGCPAHRQGCN*KDYPAF Trigger: GAAGGCAGGATAGTCTTTTCAGTTACAACCTTGCCT...GTGTGCAGGACACCCACAGCAGAGACCTCCTTCCCTGGGCTCAGCACTTCGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR CAA 90 bp | TGTAACAGAAAGGGGAGGGGTGATCTTGCAGAGCTCAGCTGTGGTTaGAGCCTGGTGTCCTTACAGGTGAATCCCACAGCAGCCGTATCT | + |
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Preference number: 2 (lower is better) Translates to: CNRKGRGDLAELSCG*SLVSLQVNPTAAVS Trigger: AGATACGGCTGCTGTGGGATTCACCTGTAAGGACACCAGGCTCAAACCACAGCTGAGCTCTGCAAGATCACCCCTCCCCTTTCTGTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR CCA 90 bp | ACACATTCTGGTGACCAGGCCAGCCCAGTGCAAGAGGGCCTCTGGACTAAGACATCTAGTTTGGTAGCTTaGGGGTTGGGGGAGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: THSGDQASPVQEGLWTKTSSLVA*GLGEKQ Trigger: TTGTTTCTCCCCCAACCCCCAAGCTACCAAACTAGA...TGTCTTAGTCCAGAGGCCCTCTTGCACTGGGCTGGCCTGGTCACCAGAATGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGGGCTTCCAGAGGACGAAGCTCATCCATTCTTGTGCTGATTCAGTGTCTAGCAAGCTCTTCCGGTaGCCTCATGGCTCTGCTACT | + |
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Preference number: 2 (lower is better) Translates to: CEGFQRTKLIHSCADSVSSKLFR*PHGSAT Trigger: AGTAGCAGAGCCATGAGGCCACCGGAAGAGCTTGCT...AGACACTGAATCAGCACAAGAATGGATGAGCTTCGTCCTCTGGAAGCCCTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR CAA 90 bp | CTATCCTGCCTTCATAGTACCTCAAGTCTACTGGGTCTCTGGAGCTaGGTGGGGCTTGTAACCATTGCAAACTGGGCCACAATTCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: LSCLHSTSSLLGLWS*VGLVTIANWATIPV Trigger: GACAGGAATTGTGGCCCAGTTTGCAATGGTTACAAGCCCCACCAAGCTCCAGAGACCCAGTAGACTTGAGGTACTATGAAGGCAGGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR CCA 90 bp | AACCAGGGCTCCAGGCTCCCCAGCCACGGAGCTGAAATACTGTCAGCAAAACCTTTGCTTACACTAGTGTaGAAACCGAATCACTGGATG | + |
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Preference number: 2 (lower is better) Translates to: NQGSRLPSHGAEILSAKPLLTLV*KPNHWM Trigger: CATCCAGTGATTCGGTTTCCACACTAGTGTAAGCAA...AGGTTTTGCTGACAGTATTTCAGCTCCGTGGCTGGGGAGCCTGGAGCCCTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR CCA 90 bp | TGGAGCCTTAGCTCTTTTGGGGGTCAGAGGGTGATTTGTCCAGTACGAGCATATGACCAAACTCCAGTTTaGGGATTGAGACTCGGCATC | + |
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Preference number: 2 (lower is better) Translates to: WSLSSFGGQRVICPVRAYDQTPV*GLRLGI Trigger: GATGCCGAGTCTCAATCCCCAAACTGGAGTTTGGTC...ATATGCTCGTACTGGACAAATCACCCTCTGACCCCCAAAAGAGCTAAGGCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR CCA 90 bp | AACCAGGGCTCCAGGCTCCCCAGCCACGGAGCTGAAATACTGTCAGCAAAACCTAACTTTATTTTAGAATaGTCTCACCACCCACTCAGG | + |
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Preference number: 2 (lower is better) Translates to: NQGSRLPSHGAEILSAKPNFILE*SHHPLR Trigger: CCTGAGTGGGTGGTGAGACCATTCTAAAATAAAGTT...AGGTTTTGCTGACAGTATTTCAGCTCCGTGGCTGGGGAGCCTGGAGCCCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR CAA 90 bp | CAGTCCAGTCTGATGACAGCACAAGAAGCCATTCTGTCCAATGAGTaGAGATTTTCCATGGTGCCACCCTTACTCCCAGACCAAACTCCA | + |
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Preference number: 2 (lower is better) Translates to: QSSLMTAQEAILSNE*RFSMVPPLLPDQTP Trigger: TGGAGTTTGGTCTGGGAGTAAGGGTGGCACCATGGAAAATCTCAACTCATTGGACAGAATGGCTTCTTGTGCTGTCATCAGACTGGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCCTTAGCTCTTTTGGGGGTCAGAGGGTGATTTGTCCAGTACGAGCATATGGCATTGAGATTACCTaGATCGACAGCGTTCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: WSLSSFGGQRVICPVRAYGIEIT*IDSVLH Trigger: ATGGAGAACGCTGTCGATTCAGGTAATCTCAATGCC...ATATGCTCGTACTGGACAAATCACCCTCTGACCCCCAAAAGAGCTAAGGCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGGGCTTCCAGAGGACGAAGCTCATCCATTCTTGTGCTGATTCAGTGTCTATGCTGTGGACTGTCTaGAAGGCAGATCAGCATCTT | + |
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Preference number: 2 (lower is better) Translates to: CEGFQRTKLIHSCADSVSMLWTV*KADQHL Trigger: AAGATGCTGATCTGCCTTGCAGACAGTCCACAGCAT...AGACACTGAATCAGCACAAGAATGGATGAGCTTCGTCCTCTGGAAGCCCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR TCA 90 bp | AAAACCTGGCAAGTGCTAGGCCTTTGCATTCCTGTTCTTAACTATGACGAAGAAAGCTCAGCTGTGGTTTaGGCCTGGTGTCCTTACAGG | + |
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Preference number: 2 (lower is better) Translates to: KTWQVLGLCIPVLNYDEESSAVV*AWCPYR Trigger: CCTGTAAGGACACCAGGCTCAAACCACAGCTGAGCT...TTCTTCGTCATAGTTAAGAACAGGAATGCAAAGGCCTAGCACTTGCCAGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR TCA 90 bp | GTACCAAAGAACATCATTCCAACCATAGACCATGGGACATACTCAAAATCAGAGCAGAAAGGGGAGGGGTaGTCTTGCAGAGCTCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: VPKNIIPTIDHGTYSKSEQKGEG*SCRAQL Trigger: CAGCTGAGCTCTGCAAGATCACCCCTCCCCTTTCTG...CTCTGATTTTGAGTATGTCCCATGGTCTATGGTTGGAATGATGTTCTTTGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR TCA 90 bp | AAGTGTTTTGAAAAGAGACCCAAGAGAGACTTTACTAGGATGCCGGTGCTGCTCCCCTCAAATGACCAATaGCTACCACTTACTCGAACC | + |
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Preference number: 2 (lower is better) Translates to: KCFEKRPKRDFTRMPVLLPSNDQ*LPLTRT Trigger: GGTTCGAGTAAGTGGTAGTCATTGGTCATTTGAGGG...GAGCAGCACCGGCATCCTAGTAAAGTCTCTCTTGGGTCTCTTTTCAAAACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR CAA 90 bp | CTAATCACCACATCCACCGCTGTGACAATACATACAGCCCTTCTGTaGCAGATACACGTAGAAGAAGCTGAGCCTTTTGTCATTAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LITTSTAVTIHTALL*QIHVEEAEPFVIRL Trigger: AAGCCTAATGACAAAAGGCTCAGCTTCTTCTACGTGTATCTGCAACAGAAGGGCTGTATGTATTGTCACAGCGGTGGATGTGGTGATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR CAA 90 bp | AACACAGCCTCGAATGCATTCACTCAGTTGTCAACTTCCATGTTGTaGGGCCTTAAACTTCCTAATCACCACATCCACCGCTGTGACAAT | + |
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Preference number: 2 (lower is better) Translates to: NTASNAFTQLSTSML*GLKLPNHHIHRCDN Trigger: ATTGTCACAGCGGTGGATGTGGTGATTAGGAAGTTTAAGGCCCAACAACATGGAAGTTGACAACTGAGTGAATGCATTCGAGGCTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCATCTTGCTTCACTAATAGTTCCTGGAGGAGATGAGTTGGTAAATAAAGCACTTCCGGTGGCCTCATaGCTCTGCTACTATCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: QHLASLIVPGGDELVNKALPVAS*LCYYLQ Trigger: CTGAAGATAGTAGCAGAGCCATGAGGCCACCGGAAG...TGCTTTATTTACCAACTCATCTCCTCCAGGAACTATTAGTGAAGCAAGATGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR TCA 90 bp | AAGTGTTTTGAAAAGAGACCCAAGAGAGACTTTACTAGGATGCCGGTGCTGCTCAGCCATTCTGTCCAATaGGTTGAGATTTTCCATGGT | + |
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Preference number: 2 (lower is better) Translates to: KCFEKRPKRDFTRMPVLLSHSVQ*VEIFHG Trigger: ACCATGGAAAATCTCAACTCATTGGACAGAATGGCT...GAGCAGCACCGGCATCCTAGTAAAGTCTCTCTTGGGTCTCTTTTCAAAACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR TCA 90 bp | CCCGCTTATTCTCTCCAAATAGGCTGCAGCTTTTCTTGTGCTAAAATTCTTCAGCATCCATTCTTGTGCTaGTTCAGTGTCTTCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PAYSLQIGCSFSCAKILQHPFLC*FSVFQA Trigger: AGCCTGGAAGACACTGAATCAGCACAAGAATGGATG...CTGAAGAATTTTAGCACAAGAAAAGCTGCAGCCTATTTGGAGAGAATAAGCGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR CCA 90 bp | TCATGGCTCTGCTACTATCTTCAGTGTCCTCACAGGAAACTTTATTTTAGAATGAGTCTACTGGGTCTCTaGAGCTTGGTGGGGCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: SWLCYYLQCPHRKLYFRMSLLGL*SLVGLV Trigger: TACAAGCCCCACCAAGCTCCAGAGACCCAGTAGACT...CATTCTAAAATAAAGTTTCCTGTGAGGACACTGAAGATAGTAGCAGAGCCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR GCA 90 bp | TCCATTCTTGTGCTGATTCAGTGTCTTCCAGGCTTATGTGGAAGCTCAAGCAACCTGAAAAGACTATCCTaGCTTCATAGTACCTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: SILVLIQCLPGLCGSSSNLKRLS*LHSTSS Trigger: ACTTGAGGTACTATGAAGGCAGGATAGTCTTTTCAG...GTTGCTTGAGCTTCCACATAAGCCTGGAAGACACTGAATCAGCACAAGAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR TCA 90 bp | TGCATAAGCAAGACAGTTGAAAGCTTCCAAAATAGAAACCTGAAACACGTGGTCAAGTCCATCCAAGAGTaGCCAGTCATGACAAATTCT | + |
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Preference number: 2 (lower is better) Translates to: CISKTVESFQNRNLKHVVKSIQE*PVMTNS Trigger: AGAATTTGTCATGACTGGTCACTCTTGGATGGACTT...GACCACGTGTTTCAGGTTTCTATTTTGGAAGCTTTCAACTGTCTTGCTTATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR GCA 90 bp | CATCCAAGAGTGACCAGTCATGACAAATTCTTAGGACACTGTTTAATGTTGTGTGGCAGATCAGCATCTTaGTTCACTAATAGTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: HPRVTSHDKFLGHCLMLCGRSAS*FTNSSW Trigger: CCAGGAACTATTAGTGAAGCAAGATGCTGATCTGCC...ACACAACATTAAACAGTGTCCTAAGAATTTGTCATGACTGGTCACTCTTGGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR TCA 90 bp | TGCATAAGCAAGACAGTTGAAAGCTTCCAAAATAGAAACCTGAAACACGTGGTCAGAGTAGTAGCAAGATaGGAAAAGGATGTGTTATTC | + |
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Preference number: 2 (lower is better) Translates to: CISKTVESFQNRNLKHVVRVVAR*EKDVLF Trigger: GAATAACACATCCTTTTCTCATCTTGCTACTACTCT...GACCACGTGTTTCAGGTTTCTATTTTGGAAGCTTTCAACTGTCTTGCTTATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR TCA 72 bp | AGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTGTaGGGAGCTGGCAGCCCGTCGTGCGTTGCTTACACT | + |
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Preference number: 3 (lower is better) Translates to: RAGVAACPHFHL*GAGSPSCVAYT Trigger: AGTGTAAGCAACGCACGACGGGCTGCCAGCTCCTCACAGGTGGAAATGAGGACACGCTGCGACTCCTGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR TCA 72 bp | GGGATGTCATTGCATCTGGTGCTTATTCCGAAGTGCTaGGCCCAGGGAAGGAGGTCTCTGCTGTGGGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: GMSLHLVLIPKC*AQGRRSLLWVS Trigger: GGACACCCACAGCAGAGACCTCCTTCCCTGGGCTCAGCACTTCGGAATAAGCACCAGATGCAATGACATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR TCA 72 bp | TGTAAACCAGGGCTCCAGGCTCCCCAGCCACGGAGCTaGAATACTGTCAGCAAAACCTGGCAAGTGCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: CKPGLQAPQPRS*NTVSKTWQVLG Trigger: GCCTAGCACTTGCCAGGTTTTGCTGACAGTATTTCAGCTCCGTGGCTGGGGAGCCTGGAGCCCTGGTTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR CCA 72 bp | CTCTGGAGCTTGGTGGGGCTTGTAACCATTGCAAACTaGGCCACAATTCCTGTCCACCCAAGACCGTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: LWSLVGLVTIAN*ATIPVHPRPCP Trigger: GGGACACGGTCTTGGGTGGACAGGAATTGTGGCCCAGTTTGCAATGGTTACAAGCCCCACCAAGCTCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR CCA 72 bp | GAGCTGGCAGCCCGTCGTGCGTTGCTTACACTAGTGTaGAAACCGAATCACTGGATGCTGTGGACTGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: ELAARRALLTLV*KPNHWMLWTVC Trigger: GCAGACAGTCCACAGCATCCAGTGATTCGGTTTCCACACTAGTGTAAGCAACGCACGACGGGCTGCCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR GCA 72 bp | ACTGGGTCTCTGGAGCTTGGTGGGGCTTGTAACCATTaGAAACTGGGCCACAATTCCTGTCCACCCAAGACC | + |
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Preference number: 3 (lower is better) Translates to: TGSLELGGACNH*KLGHNSCPPKT Trigger: GGTCTTGGGTGGACAGGAATTGTGGCCCAGTTTGCAATGGTTACAAGCCCCACCAAGCTCCAGAGACCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR GCA 72 bp | TTATTCCGAAGTGCTGAGCCCAGGGAAGGAGGTCTCTaGTGTGGGTGTCCTGCACACCTTCTTAGCTCTAAG | + |
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Preference number: 3 (lower is better) Translates to: LFRSAEPREGGL*CGCPAHLLSSK Trigger: CTTAGAGCTAAGAAGGTGTGCAGGACACCCACAGCAGAGACCTCCTTCCCTGGGCTCAGCACTTCGGAATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR GCA 72 bp | ACTTACTCGAACCCTTCGGGATGTCATTGCATCTGGTaGTTATTCCGAAGTGCTGAGCCCAGGGAAGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: TYSNPSGCHCIW*LFRSAEPREGG Trigger: ACCTCCTTCCCTGGGCTCAGCACTTCGGAATAAGCACCAGATGCAATGACATCCCGAAGGGTTCGAGTAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR CCA 72 bp | ATGGTGCCACCCTTACTCCCAGACCAAACTCCAGTTTaGGGATTGAGACTCGGCATCAGGCAAGGTTGTAAC | + |
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Preference number: 3 (lower is better) Translates to: MVPPLLPDQTPV*GLRLGIRQGCN Trigger: GTTACAACCTTGCCTGATGCCGAGTCTCAATCCCCAAACTGGAGTTTGGTCTGGGAGTAAGGGTGGCACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR CCA 72 bp | ACCACTTACTCGAACCCTTCGGGATGTCATTGCATCTaGTGCTTATTCCGAAGTGCTGAGCCCAGGGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: TTYSNPSGCHCI*CLFRSAEPREG Trigger: TCCTTCCCTGGGCTCAGCACTTCGGAATAAGCACCAGATGCAATGACATCCCGAAGGGTTCGAGTAAGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR CAA 90 bp | AGGAAACTTTATTTTAGAATGGTCTCACCACCCACTCAGGGACAGTCCAGTCTGAGGGGAGGGGTGATCTaGCAGAGCTCAGCTGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: RKLYFRMVSPPTQGQSSLRGGVI*QSSAVV Trigger: AACCACAGCTGAGCTCTGCAAGATCACCCCTCCCCT...CAGACTGGACTGTCCCTGAGTGGGTGGTGAGACCATTCTAAAATAAAGTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR-3UTR CAA 90 bp | TTCAGTGTCTTCCAGGCTTATGTGGAAGCTCAAGCAACTGAAGGTGTTGAAGGCCTGGGTCTCTGGAGCTaGGTGGGGCTTGTAACCATT | + |
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Preference number: 3 (lower is better) Translates to: FSVFQAYVEAQATEGVEGLGLWS*VGLVTI Trigger: AATGGTTACAAGCCCCACCAAGCTCCAGAGACCCAG...GCCTTCAACACCTTCAGTTGCTTGAGCTTCCACATAAGCCTGGAAGACACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| 3UTR TCA 72 bp | CTTGCCTATGTCTTTTTCCAGCATAAGGTACAGGTCTaGGCAAAATGGACAGCGGCTTGGAAGGCCGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LAYVFFQHKVQV*AKWTAAWKAGS Trigger: AGAACCGGCCTTCCAAGCCGCTGTCCATTTTGCTCAGACCTGTACCTTATGCTGGAAAAAGACATAGGCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR TCA 72 bp | CAGTCTGATGACAGCACAAGAAGCCATTCTGTCCAATaGGTTGAGATTTTCCATGGTGCCACCCTTACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QSDDSTRSHSVQ*VEIFHGATLTP Trigger: GGGAGTAAGGGTGGCACCATGGAAAATCTCAACTCATTGGACAGAATGGCTTCTTGTGCTGTCATCAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAGGGCTTCCAGAGGACGAAGCTCATCCATTCTTGTGCTGATTCAGTGTCTCTTAAACAGGAGGCATaGAGATTACCTGAATCGACA | + |
|
Preference number: 3 (lower is better) Translates to: CEGFQRTKLIHSCADSVSLKQEA*RLPEST Trigger: TGTCGATTCAGGTAATCTCAATGCCTCCTGTTTAAG...AGACACTGAATCAGCACAAGAATGGATGAGCTTCGTCCTCTGGAAGCCCTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR TCA 72 bp | TGGGGATTGAGACTCGGCATCAGGCAAGGTTGTAACTaGAAAGACTATCCTGCCTTCATAGTACCTCAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: WGLRLGIRQGCN*KDYPAFIVPQV Trigger: GACTTGAGGTACTATGAAGGCAGGATAGTCTTTTCAGTTACAACCTTGCCTGATGCCGAGTCTCAATCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR GCA 72 bp | GTGTGGAAACCGAATCACTGGATGCTGTGGACTGTCTaGAAGGCAGATCAGCATCTTGCTTCACTAATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VWKPNHWMLWTV*KADQHLASLIV Trigger: AACTATTAGTGAAGCAAGATGCTGATCTGCCTTGCAGACAGTCCACAGCATCCAGTGATTCGGTTTCCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR GCA 72 bp | AGAGACCCAAGAGAGACTTTACTAGGATGCCGGTGCTaGTCTGTAAGAAGTGAGTTTGGTGAATTGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RDPRETLLGCRC*SVRSEFGELRR Trigger: CCTTCTCAATTCACCAAACTCACTTCTTACAGAGCAGCACCGGCATCCTAGTAAAGTCTCTCTTGGGTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR GCA 72 bp | AAAAGAGACCCAAGAGAGACTTTACTAGGATGCCGGTaGTGCTCTGTAAGAAGTGAGTTTGGTGAATTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KRDPRETLLGCR*CSVRSEFGELR Trigger: TCTCAATTCACCAAACTCACTTCTTACAGAGCAGCACCGGCATCCTAGTAAAGTCTCTCTTGGGTCTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR GCA 72 bp | GTTTTGAAAAGAGACCCAAGAGAGACTTTACTAGGATaGCGGTGCTGCTCTGTAAGAAGTGAGTTTGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VLKRDPRETLLG*RCCSVRSEFGE Trigger: TTCACCAAACTCACTTCTTACAGAGCAGCACCGGCATCCTAGTAAAGTCTCTCTTGGGTCTCTTTTCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR GCA 72 bp | AATACTGTCAGCAAAACCTGGCAAGTGCTAGGCCTTTaGATTCCTGTTCTTAACTATGACGAAGAAGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NTVSKTWQVLGL*IPVLNYDEEEK Trigger: CTTCTCTTCTTCGTCATAGTTAAGAACAGGAATGCAAAGGCCTAGCACTTGCCAGGTTTTGCTGACAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR TCA 72 bp | TCTACATTGATGACTTGGCCCAGAGTAGTAGCAAGATaGGAAAAGGATGTGTTATTCTTCCTGATTCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: STLMTWPRVVAR*EKDVLFFLIPR Trigger: TCTGGGAATCAGGAAGAATAACACATCCTTTTCTCATCTTGCTACTACTCTGGGCCAAGTCATCAATGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR TCA 72 bp | TCTGAAATACCACATGCTGTGATTATCCTGGGAAGATaGGTTGTGTATTTCGGCAAGAAAACCCAAGTTACC | + |
|
Preference number: 3 (lower is better) Translates to: SEIPHAVIILGR*VVYFGKKTQVT Trigger: GGTAACTTGGGTTTTCTTGCCGAAATACACAACTCATCTTCCCAGGATAATCACAGCATGTGGTATTTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR TCA 72 bp | GAAAGCTTCCAAAATAGAAACCTGAAACACGTGGTCTaGAATACCACATGCTGTGATTATCCTGGGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: ESFQNRNLKHVV*NTTCCDYPGKM Trigger: CATCTTCCCAGGATAATCACAGCATGTGGTATTTCAGACCACGTGTTTCAGGTTTCTATTTTGGAAGCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR GCA 72 bp | CATCCTCCATCTAAATTATGTAAACACAGCCTCGAATaGATTCACTCAGTTGTCAACTTCCATGTTGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HPPSKLCKHSLE*IHSVVNFHVVG Trigger: CCCAACAACATGGAAGTTGACAACTGAGTGAATGCATTCGAGGCTGTGTTTACATAATTTAGATGGAGGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR TCA 72 bp | TTTCTTGTATCAAGTCCATCCAAGAGTGACCAGTCATaGCAAATTCTTAGGACACTGTTTAATGTTGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLVSSPSKSDQS*QILRTLFNVVW Trigger: CCACACAACATTAAACAGTGTCCTAAGAATTTGTCATGACTGGTCACTCTTGGATGGACTTGATACAAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | GATGTCATTGCATCTGGTGCTTATTCCGAAGTGCTGAGCCCAGGGAAGGAGGTCAGCCCGCAGCGGCGCTaGAAGCGCGCCACGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DVIASGAYSEVLSPGKEVSPQRR*KRATSC Trigger: ACAGCTCGTGGCGCGCTTCCAGCGCCGCTGCGGGCT...GACCTCCTTCCCTGGGCTCAGCACTTCGGAATAAGCACCAGATGCAATGACATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | ACACATTCTGGTGACCAGGCCAGCCCAGTGCAAGAGGGCCTCTGGACTAAGACACCCCAGCAGCCACGATaGTGGTGGTGTCTGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: THSGDQASPVQEGLWTKTPQQPR*WWCLPW Trigger: CCAGGGCAGACACCACCACCATCGTGGCTGCTGGGG...TGTCTTAGTCCAGAGGCCCTCTTGCACTGGGCTGGCCTGGTCACCAGAATGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | ACACATTCTGGTGACCAGGCCAGCCCAGTGCAAGAGGGCCTCTGGACTAAGACAGTGGCCGCCATGGCGTaGGTGGATGGCATTCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: THSGDQASPVQEGLWTKTVAAMA*VDGIPY Trigger: GTACGGAATGCCATCCACCCACGCCATGGCGGCCAC...TGTCTTAGTCCAGAGGCCCTCTTGCACTGGGCTGGCCTGGTCACCAGAATGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR TCA 90 bp | GGACGAAGCTCATCCATTCTTGTGCTGATTCAGTGTCTTCCAGGCTTATGTGGAGCGCGCCACGAGCTGTaGATCCCGCAGGCTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRSSSILVLIQCLPGLCGARHEL*IPQAPQ Trigger: CTGCGGAGCCTGCGGGATTCACAGCTCGTGGCGCGC...TCCACATAAGCCTGGAAGACACTGAATCAGCACAAGAATGGATGAGCTTCGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR GCA 90 bp | ACACATTCTGGTGACCAGGCCAGCCCAGTGCAAGAGGGCCTCTGGACTAAGACAGATGGTGGTGGTGTCTaGCCTGGTCGGGCTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: THSGDQASPVQEGLWTKTDGGGV*PGRAVV Trigger: TACTACAGCCCGACCAGGGCAGACACCACCACCATC...TGTCTTAGTCCAGAGGCCCTCTTGCACTGGGCTGGCCTGGTCACCAGAATGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | ACACATTCTGGTGACCAGGCCAGCCCAGTGCAAGAGGGCCTCTGGACTAAGACACAGGAAGAGATGGGGTaGGCTTGGACACGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: THSGDQASPVQEGLWTKTQEEMG*AWTRAG Trigger: TCCAGCTCGTGTCCAAGCCCACCCCATCTCTTCCTG...TGTCTTAGTCCAGAGGCCCTCTTGCACTGGGCTGGCCTGGTCACCAGAATGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | GTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTACTTCAGGATGTCCTTaGCCACCTGGCCAATATACA | + |
|
Preference number: 4 (lower is better) Translates to: VEGEAGEGRSRSVSSFPPTSGCP*PPGQYT Trigger: TGTATATTGGCCAGGTGGCCAAGGACATCCTGAAGT...AGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR CAA 72 bp | ATTTCCACCTGTGAGGAGCTGGCAGCCCGTCGTGCGTaGCTTACACTAGTGTGGAAACCGAATCACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ISTCEELAARRA*LTLVWKPNHWM Trigger: CATCCAGTGATTCGGTTTCCACACTAGTGTAAGCAACGCACGACGGGCTGCCAGCTCCTCACAGGTGGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR GCA 90 bp | GTTGAAGGCGAGGCAGGTGAGGGCAGGAGTCGCAGCGTGTCCTCATTTCCACCTCATGAGAATAATACTTaGAGGGAGAGCTTTTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VEGEAGEGRSRSVSSFPPHENNT*RESFCT Trigger: GGTGCAAAAGCTCTCCCTGCAAGTATTATTCTCATG...AGGTGGAAATGAGGACACGCTGCGACTCCTGCCCTCACCTGCCTCGCCTTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | GTACCAAAGAACATCATTCCAACCATAGACCATGGGACATACTCAAAATCAGAGAGAAGCCTCCCGCGCTaGGAAGAGCCCGCAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPKNIIPTIDHGTYSKSERSLPR*EEPAAA Trigger: CGCCGCTGCGGGCTCTTCCCAGCGCGGGAGGCTTCT...CTCTGATTTTGAGTATGTCCCATGGTCTATGGTTGGAATGATGTTCTTTGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | GATGTCATTGCATCTGGTGCTTATTCCGAAGTGCTGAGCCCAGGGAAGGAGGTCCATGGCGTGGGTGGATaGCATTCCGTACTCTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DVIASGAYSEVLSPGKEVHGVGG*HSVLCN Trigger: ATTGCAGAGTACGGAATGCCATCCACCCACGCCATG...GACCTCCTTCCCTGGGCTCAGCACTTCGGAATAAGCACCAGATGCAATGACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | TGGAGCCTTAGCTCTTTTGGGGGTCAGAGGGTGATTTGTCCAGTACGAGCATATTGGTGGTGTCTGCCCTaGTCGGGCTGTAGTAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSLSSFGGQRVICPVRAYWWCLP*SGCSSQ Trigger: CTGACTACTACAGCCCGACCAGGGCAGACACCACCA...ATATGCTCGTACTGGACAAATCACCCTCTGACCCCCAAAAGAGCTAAGGCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | GATGTCATTGCATCTGGTGCTTATTCCGAAGTGCTGAGCCCAGGGAAGGAGGTCGGGTCGATATTCCAGTaGGTGAAAGGGAGAAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: DVIASGAYSEVLSPGKEVGSIFQ*VKGRNV Trigger: CACGTTTCTCCCTTTCACCCACTGGAATATCGACCC...GACCTCCTTCCCTGGGCTCAGCACTTCGGAATAAGCACCAGATGCAATGACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | CCCGCTTATTCTCTCCAAATAGGCTGCAGCTTTTCTTGTGCTAAAATTCTTCAGTGGCGGTGGCCGCCATaGCGTGGGTGGATGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PAYSLQIGCSFSCAKILQWRWPP*RGWMAF Trigger: GAATGCCATCCACCCACGCCATGGCGGCCACCGCCA...CTGAAGAATTTTAGCACAAGAAAAGCTGCAGCCTATTTGGAGAGAATAAGCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTCTTGTGCTGATTCAGTGTCTTCCAGGCTTATGTGGAAGCTCAAGCAACCAGGGAAGAGGGGGCTaGCAGAGTCCAGGGAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SILVLIQCLPGLCGSSSNQGRGG*QSPGNR Trigger: TCGATTCCCTGGACTCTGCCAGCCCCCTCTTCCCTG...GTTGCTTGAGCTTCCACATAAGCCTGGAAGACACTGAATCAGCACAAGAATGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | CAATTCCTGTCCACCCAAGACCGTGTCCCAAGTCCATGTAACAGAAAGGGGAGGGTCAGTGGTAAGGGGTaGGATGTTCTGAATGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QFLSTQDRVPSPCNRKGRVSGKG*DVLNDR Trigger: CCTGTCATTCAGAACATCCCACCCCTTACCACTGAC...CCTCCCCTTTCTGTTACATGGACTTGGGACACGGTCTTGGGTGGACAGGAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | CTTCAGTGTCCTCACAGGAAACTTTATTTTAGAATGGTCTCACCACCCACTCAGCCGCCATGGCGTGGGTaGATGGCATTCCGTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQCPHRKLYFRMVSPPTQPPWRG*MAFRTL Trigger: CAGAGTACGGAATGCCATCCACCCACGCCATGGCGG...CTGAGTGGGTGGTGAGACCATTCTAAAATAAAGTTTCCTGTGAGGACACTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR CAA 72 bp | CTTCATAGTACCTCAAGTCTACTGGGTCTCTGGAGCTaGGTGGGGCTTGTAACCATTGCAAACTGGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LHSTSSLLGLWS*VGLVTIANWAT Trigger: TGTGGCCCAGTTTGCAATGGTTACAAGCCCCACCAAGCTCCAGAGACCCAGTAGACTTGAGGTACTATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR CAA 72 bp | GCCAGCATTACAAGCTCTAGTTTGGTAGCTTGGGGGTaGGGGGAGAAACAACAGAAACAGCCATGCACAACT | + |
|
Preference number: 4 (lower is better) Translates to: ASITSSSLVAWG*GEKQQKQPCTT Trigger: AGTTGTGCATGGCTGTTTCTGTTGTTTCTCCCCCAACCCCCAAGCTACCAAACTAGAGCTTGTAATGCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | CATCCAAGAGTGACCAGTCATGACAAATTCTTAGGACACTGTTTAATGTTGTGTCAGCAGCCACGATGGTaGTGGTGTCTGCCCTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HPRVTSHDKFLGHCLMLCQQPRW*WCLPWS Trigger: CGACCAGGGCAGACACCACCACCATCGTGGCTGCTG...ACACAACATTAAACAGTGTCCTAAGAATTTGTCATGACTGGTCACTCTTGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | TCCATTCTTGTGCTGATTCAGTGTCTTCCAGGCTTATGTGGAAGCTCAAGCAACGAGATGGGGTGGGCTTaGACACGAGCTGGAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SILVLIQCLPGLCGSSSNEMGWA*TRAGRN Trigger: ATTTCTTCCAGCTCGTGTCCAAGCCCACCCCATCTC...GTTGCTTGAGCTTCCACATAAGCCTGGAAGACACTGAATCAGCACAAGAATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR CAA 72 bp | CTGATGACAGCACAAGAAGCCATTCTGTCCAATGAGTaGAGATTTTCCATGGTGCCACCCTTACTCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LMTAQEAILSNE*RFSMVPPLLPD Trigger: GTCTGGGAGTAAGGGTGGCACCATGGAAAATCTCAACTCATTGGACAGAATGGCTTCTTGTGCTGTCATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR TCA 90 bp | CTTCAGTGTCCTCACAGGAAACTTTATTTTAGAATGGTCTCACCACCCACTCAGCTGGCCCAAAGCGGCTaGAAACCGGAACAGGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: LQCPHRKLYFRMVSPPTQLAQSG*KPEQVI Trigger: TATTACCTGTTCCGGTTTTCAGCCGCTTTGGGCCAG...CTGAGTGGGTGGTGAGACCATTCTAAAATAAAGTTTCCTGTGAGGACACTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR TCA 90 bp | CTTCAGTGTCCTCACAGGAAACTTTATTTTAGAATGGTCTCACCACCCACTCAGGGAACGGTACAACTATaGCACACACAGGGAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQCPHRKLYFRMVSPPTQGTVQL*HTQGRG Trigger: CCCTCTTCCCTGTGTGTGTCATAGTTGTACCGTTCC...CTGAGTGGGTGGTGAGACCATTCTAAAATAAAGTTTCCTGTGAGGACACTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR TCA 90 bp | AGCTCATCCATTCTTGTGCTGATTCAGTGTCTTCCAGGCTTATGTGGAAGCTCAGCTGGAAGAAATGGTTaGTCCAGAATCCCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSILVLIQCLPGLCGSSAGRNG*SRIPGS Trigger: TGACCCTGGGATTCTGGATCAACCATTTCTTCCAGC...TGAGCTTCCACATAAGCCTGGAAGACACTGAATCAGCACAAGAATGGATGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | CTTCAGTGTCCTCACAGGAAACTTTATTTTAGAATGGTCTCACCACCCACTCAGGGCTTGGACACGAGCTaGAAGAAATGGTTGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQCPHRKLYFRMVSPPTQGLDTS*KKWLIQ Trigger: CTGGATCAACCATTTCTTCCAGCTCGTGTCCAAGCC...CTGAGTGGGTGGTGAGACCATTCTAAAATAAAGTTTCCTGTGAGGACACTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | CCCGCTTATTCTCTCCAAATAGGCTGCAGCTTTTCTTGTGCTAAAATTCTTCAGAATGACAGGAAGAGATaGGGTGGGCTTGGACACGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAYSLQIGCSFSCAKILQNDRKR*GGLGHE Trigger: CTCGTGTCCAAGCCCACCCCATCTCTTCCTGTCATT...CTGAAGAATTTTAGCACAAGAAAAGCTGCAGCCTATTTGGAGAGAATAAGCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | AGGAAACTTTATTTTAGAATGGTCTCACCACCCACTCAGGGACAGTCCAGTCTGAGCTTTTGCACCAGTTaGCGAACCAAGAGGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKLYFRMVSPPTQGQSSLSFCTS*RTKRIN Trigger: GTTGATCCTCTTGGTTCGCCAACTGGTGCAAAAGCT...CAGACTGGACTGTCCCTGAGTGGGTGGTGAGACCATTCTAAAATAAAGTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR CAA 72 bp | ACATCCACCGCTGTGACAATACATACAGCCCTTCTGTaGCAGATACACGTAGAAGAAGCTGAGCCTTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSTAVTIHTALL*QIHVEEAEPFV Trigger: GACAAAAGGCTCAGCTTCTTCTACGTGTATCTGCAACAGAAGGGCTGTATGTATTGTCACAGCGGTGGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR GCA 90 bp | GTACCAAAGAACATCATTCCAACCATAGACCATGGGACATACTCAAAATCAGAGCAGAGCAATGAGGACTaGAGTGATCAGAACGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VPKNIIPTIDHGTYSKSEQSNED*SDQNAT Trigger: GGTGGCGTTCTGATCACTGCAGTCCTCATTGCTCTG...CTCTGATTTTGAGTATGTCCCATGGTCTATGGTTGGAATGATGTTCTTTGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR CCA 90 bp | AAGTGTTTTGAAAAGAGACCCAAGAGAGACTTTACTAGGATGCCGGTGCTGCTCATGTCCTTGGCCACCTaGCCAATATACATCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KCFEKRPKRDFTRMPVLLMSLAT*PIYITK Trigger: TTTGGTGATGTATATTGGCCAGGTGGCCAAGGACAT...GAGCAGCACCGGCATCCTAGTAAAGTCTCTCTTGGGTCTCTTTTCAAAACACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR CAA 72 bp | TCGAATGCATTCACTCAGTTGTCAACTTCCATGTTGTaGGGCCTTAAACTTCCTAATCACCACATCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: SNAFTQLSTSML*GLKLPNHHIHR Trigger: GCGGTGGATGTGGTGATTAGGAAGTTTAAGGCCCAACAACATGGAAGTTGACAACTGAGTGAATGCATTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| 3UTR CAA 72 bp | GCCTCGAATGCATTCACTCAGTTGTCAACTTCCATGTaGTTGGGCCTTAAACTTCCTAATCACCACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASNAFTQLSTSM*LGLKLPNHHIH Trigger: GTGGATGTGGTGATTAGGAAGTTTAAGGCCCAACAACATGGAAGTTGACAACTGAGTGAATGCATTCGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR TCA 90 bp | CATCCAAGAGTGACCAGTCATGACAAATTCTTAGGACACTGTTTAATGTTGTGTGTGGGATGTTCTGAATaGCAGGAAGAGATGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPRVTSHDKFLGHCLMLCVGCSE*QEEMGW Trigger: CCACCCCATCTCTTCCTGTCATTCAGAACATCCCAC...ACACAACATTAAACAGTGTCCTAAGAATTTGTCATGACTGGTCACTCTTGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
||
| CDS-3UTR GCA 90 bp | GGACGAAGCTCATCCATTCTTGTGCTGATTCAGTGTCTTCCAGGCTTATGTGGAAATCCCAAAAACCTGTaGAACATTGGCACAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRSSSILVLIQCLPGLCGNPKNL*NIGTKV Trigger: AACCTTTGTGCCAATGTTGCACAGGTTTTTGGGATT...TCCACATAAGCCTGGAAGACACTGAATCAGCACAAGAATGGATGAGCTTCGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS-3UTR CCA 90 bp | CCCGCTTATTCTCTCCAAATAGGCTGCAGCTTTTCTTGTGCTAAAATTCTTCAGACGAGCTGGAAGAAATaGTTGATCCAGAATCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PAYSLQIGCSFSCAKILQTSWKK*LIQNPR Trigger: CCTGGGATTCTGGATCAACCATTTCTTCCAGCTCGT...CTGAAGAATTTTAGCACAAGAAAAGCTGCAGCCTATTTGGAGAGAATAAGCGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS-3UTR GCA 90 bp | AAGTGTTTTGAAAAGAGACCCAAGAGAGACTTTACTAGGATGCCGGTGCTGCTCTGGCATTCCGTACTCTaGAATAATTCTCTTTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: KCFEKRPKRDFTRMPVLLWHSVL*NNSLFK Trigger: CTTGAAAAGAGAATTATTGCAGAGTACGGAATGCCA...GAGCAGCACCGGCATCCTAGTAAAGTCTCTCTTGGGTCTCTTTTCAAAACACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 90 bp | TCCTCTCCAGAAGCCTCCCGCGCTGGGAAGAGCCCGCAGCGGCGCTaGAAGCGCGCCACGAGCTGTGAATCCCGCAGGCTCCGCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: SSPEASRAGKSPQRR*KRATSCESRRLRSS Trigger: ACTGCTGCGGAGCCTGCGGGATTCACAGCTCGTGGCGCGCTTCCAGCGCCGCTGCGGGCTCTTCCCAGCGCGGGAGGCTTCTGGAGAGGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 90 bp | GGGTCACTCCAGCCCCAGCAGCCACGATGGTGGTGGTGTCTGCCCTaGTCGGGCTGTAGTAGTCAGACACAGGGTAATTGTAGCACAAGA | + |
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Preference number: 5 (lower is better) Translates to: GSLQPQQPRWWWCLP*SGCSSQTQGNCSTR Trigger: TCTTGTGCTACAATTACCCTGTGTCTGACTACTACAGCCCGACCAGGGCAGACACCACCACCATCGTGGCTGCTGGGGCTGGAGTGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS-3UTR CAA 90 bp | AACCAGGGCTCCAGGCTCCCCAGCCACGGAGCTGAAATACTGTCAGCAAAACCTCTTCGCCTGGCCTCCTaGTTCCTAGTAACCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NQGSRLPSHGAEILSAKPLRLAS*FLVTTL Trigger: CAAGGTGGTTACTAGGAACAAGGAGGCCAGGCGAAG...AGGTTTTGCTGACAGTATTTCAGCTCCGTGGCTGGGGAGCCTGGAGCCCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 90 bp | TCACAACGGGAGGAAAGGAGGGCCGGGGCCACTTCAGGATGTCCTTaGCCACCTGGCCAATATACATCACCAAAACCCATATCACAACCA | + |
|
Preference number: 5 (lower is better) Translates to: SQREERRAGATSGCP*PPGQYTSPKPISQP Trigger: TGGTTGTGATATGGGTTTTGGTGATGTATATTGGCCAGGTGGCCAAGGACATCCTGAAGTGGCCCCGGCCCTCCTTTCCTCCCGTTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 90 bp | GGAGGAAAGGAGGGCCGGGGCCACTTCAGGATGTCCTTGGCCACCTaGCCAATATACATCACCAAAACCCATATCACAACCAATCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGKEGRGHFRMSLAT*PIYITKTHITTNLL Trigger: CAGAAGATTGGTTGTGATATGGGTTTTGGTGATGTATATTGGCCAGGTGGCCAAGGACATCCTGAAGTGGCCCCGGCCCTCCTTTCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS-3UTR CAA 90 bp | GATGTCATTGCATCTGGTGCTTATTCCGAAGTGCTGAGCCCAGGGAAGGAGGTCCACTTCAGGATGTCCTaGGCCACCTGGCCAATATAC | + |
|
Preference number: 5 (lower is better) Translates to: DVIASGAYSEVLSPGKEVHFRMS*ATWPIY Trigger: GTATATTGGCCAGGTGGCCAAGGACATCCTGAAGTG...GACCTCCTTCCCTGGGCTCAGCACTTCGGAATAAGCACCAGATGCAATGACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS-3UTR CAA 90 bp | ACACATTCTGGTGACCAGGCCAGCCCAGTGCAAGAGGGCCTCTGGACTAAGACAAAAACCTGTGCAACATaGGCACAAAGGTTGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: THSGDQASPVQEGLWTKTKTCAT*AQRLWH Trigger: GTGCCACAACCTTTGTGCCAATGTTGCACAGGTTTT...TGTCTTAGTCCAGAGGCCCTCTTGCACTGGGCTGGCCTGGTCACCAGAATGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 90 bp | CATGTCAGTGGTAAGGGGTGGGATGTTCTGAATGACAGGAAGAGATaGGGTGGGCTTGGACACGAGCTGGAAGAAATGGTTGATCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: HVSGKGWDVLNDRKR*GGLGHELEEMVDPE Trigger: TTCTGGATCAACCATTTCTTCCAGCTCGTGTCCAAGCCCACCCCATCTCTTCCTGTCATTCAGAACATCCCACCCCTTACCACTGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS-3UTR CAA 90 bp | ACACATTCTGGTGACCAGGCCAGCCCAGTGCAAGAGGGCCTCTGGACTAAGACAATTCCCACCATAAATTaGGTCAGACCTAAAACCAGC | + |
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Preference number: 5 (lower is better) Translates to: THSGDQASPVQEGLWTKTIPTIN*VRPKTS Trigger: GCTGGTTTTAGGTCTGACCAAATTTATGGTGGGAAT...TGTCTTAGTCCAGAGGCCCTCTTGCACTGGGCTGGCCTGGTCACCAGAATGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS GCA 90 bp | GCCTCCTTGTTCCTAGTAACCACCTTGAACCATGAGAATAATACTTaGAGGGAGAGCTTTTGCACCAGTTGGCGAACCAAGAGGATCAAC | + |
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Preference number: 5 (lower is better) Translates to: ASLFLVTTLNHENNT*RESFCTSWRTKRIN Trigger: GTTGATCCTCTTGGTTCGCCAACTGGTGCAAAAGCTCTCCCTGCAAGTATTATTCTCATGGTTCAAGGTGGTTACTAGGAACAAGGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS GCA 90 bp | GTAACCACCTTGAACCATGAGAATAATACTTGCAGGGAGAGCTTTTaGACCAGTTGGCGAACCAAGAGGATCAACATGATTCCCACCATA | + |
|
Preference number: 5 (lower is better) Translates to: VTTLNHENNTCRESF*TSWRTKRINMIPTI Trigger: TATGGTGGGAATCATGTTGATCCTCTTGGTTCGCCAACTGGTGCAAAAGCTCTCCCTGCAAGTATTATTCTCATGGTTCAAGGTGGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS TCA 90 bp | GAAAGGGAGAAACGTGATGTAGAACACTTCCTGGCCCAAAGCGGCTaGAAACCGGAACAGGTAATAGTAGAAATAATTCTTCACCACATG | + |
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Preference number: 5 (lower is better) Translates to: EREKRDVEHFLAQSG*KPEQVIVEIILHHM Trigger: CATGTGGTGAAGAATTATTTCTACTATTACCTGTTCCGGTTTTCAGCCGCTTTGGGCCAGGAAGTGTTCTACATCACGTTTCTCCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS-3UTR CAA 90 bp | TGCATAAGCAAGACAGTTGAAAGCTTCCAAAATAGAAACCTGAAACACGTGGTCACATTGGCACAAAGGTaGTGGCACAGATGCCAACAG | + |
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Preference number: 5 (lower is better) Translates to: CISKTVESFQNRNLKHVVTLAQR*WHRCQQ Trigger: CTGTTGGCATCTGTGCCACAACCTTTGTGCCAATGT...GACCACGTGTTTCAGGTTTCTATTTTGGAAGCTTTCAACTGTCTTGCTTATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 90 bp | TTGAACCATGAGAATAATACTTGCAGGGAGAGCTTTTGCACCAGTTaGCGAACCAAGAGGATCAACATGATTCCCACCATAAATTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNHENNTCRESFCTS*RTKRINMIPTINLV Trigger: GACCAAATTTATGGTGGGAATCATGTTGATCCTCTTGGTTCGCCAACTGGTGCAAAAGCTCTCCCTGCAAGTATTATTCTCATGGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS-3UTR CAA 90 bp | TGCATAAGCAAGACAGTTGAAAGCTTCCAAAATAGAAACCTGAAACACGTGGTCTTCCTAGTAACCACCTaGAACCATGAGAATAATACT | + |
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Preference number: 5 (lower is better) Translates to: CISKTVESFQNRNLKHVVFLVTT*NHENNT Trigger: AGTATTATTCTCATGGTTCAAGGTGGTTACTAGGAA...GACCACGTGTTTCAGGTTTCTATTTTGGAAGCTTTCAACTGTCTTGCTTATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 72 bp | GAAGCCTCCCGCGCTGGGAAGAGCCCGCAGCGGCGCTaGAAGCGCGCCACGAGCTGTGAATCCCGCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: EASRAGKSPQRR*KRATSCESRRL Trigger: GAGCCTGCGGGATTCACAGCTCGTGGCGCGCTTCCAGCGCCGCTGCGGGCTCTTCCCAGCGCGGGAGGCTTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 72 bp | CCAGGGTCACTCCAGCCCCAGCAGCCACGATGGTGGTaGTGTCTGCCCTGGTCGGGCTGTAGTAGTCAGACA | + |
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Preference number: 6 (lower is better) Translates to: PGSLQPQQPRWW*CLPWSGCSSQT Trigger: TGTCTGACTACTACAGCCCGACCAGGGCAGACACCACCACCATCGTGGCTGCTGGGGCTGGAGTGACCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS GCA 72 bp | CACTCCAGCCCCAGCAGCCACGATGGTGGTGGTGTCTaGCCTGGTCGGGCTGTAGTAGTCAGACACAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: HSSPSSHDGGGV*PGRAVVVRHRV Trigger: TACCCTGTGTCTGACTACTACAGCCCGACCAGGGCAGACACCACCACCATCGTGGCTGCTGGGGCTGGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 72 bp | CAGCCCCAGCAGCCACGATGGTGGTGGTGTCTGCCCTaGTCGGGCTGTAGTAGTCAGACACAGGGTAATTGT | + |
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Preference number: 6 (lower is better) Translates to: QPQQPRWWWCLP*SGCSSQTQGNC Trigger: ACAATTACCCTGTGTCTGACTACTACAGCCCGACCAGGGCAGACACCACCACCATCGTGGCTGCTGGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS TCA 72 bp | ATGGGGTGGGCTTGGACACGAGCTGGAAGAAATGGTTaGTCCAGAATCCCAGGGTCACTCCAGCCCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: MGWAWTRAGRNG*SRIPGSLQPQQ Trigger: CTGCTGGGGCTGGAGTGACCCTGGGATTCTGGATCAACCATTTCTTCCAGCTCGTGTCCAAGCCCACCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 72 bp | AGAGATGGGGTGGGCTTGGACACGAGCTGGAAGAAATaGTTGATCCAGAATCCCAGGGTCACTCCAGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: RDGVGLDTSWKK*LIQNPRVTPAP Trigger: TGGGGCTGGAGTGACCCTGGGATTCTGGATCAACCATTTCTTCCAGCTCGTGTCCAAGCCCACCCCATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CAA 72 bp | GGAGGAAAGGAGGGCCGGGGCCACTTCAGGATGTCCTaGGCCACCTGGCCAATATACATCACCAAAACCCAT | + |
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Preference number: 6 (lower is better) Translates to: GGKEGRGHFRMS*ATWPIYITKTH Trigger: ATGGGTTTTGGTGATGTATATTGGCCAGGTGGCCAAGGACATCCTGAAGTGGCCCCGGCCCTCCTTTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CAA 90 bp | CTCACAACGGGAGGAAAGGAGGGCCGGGGCCACTTCAGGATGTCCTaGGCCACCTGGCCAATATACATCACCAAAACCCATATCACAACC | + |
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Preference number: 6 (lower is better) Translates to: LTTGGKEGRGHFRMS*ATWPIYITKTHITT Trigger: GGTTGTGATATGGGTTTTGGTGATGTATATTGGCCAGGTGGCCAAGGACATCCTGAAGTGGCCCCGGCCCTCCTTTCCTCCCGTTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 72 bp | GAGGGCCGGGGCCACTTCAGGATGTCCTTGGCCACCTaGCCAATATACATCACCAAAACCCATATCACAACC | + |
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Preference number: 6 (lower is better) Translates to: EGRGHFRMSLAT*PIYITKTHITT Trigger: GGTTGTGATATGGGTTTTGGTGATGTATATTGGCCAGGTGGCCAAGGACATCCTGAAGTGGCCCCGGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 72 bp | GAGGAAAGGAGGGCCGGGGCCACTTCAGGATGTCCTTaGCCACCTGGCCAATATACATCACCAAAACCCATA | + |
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Preference number: 6 (lower is better) Translates to: EERRAGATSGCP*PPGQYTSPKPI Trigger: TATGGGTTTTGGTGATGTATATTGGCCAGGTGGCCAAGGACATCCTGAAGTGGCCCCGGCCCTCCTTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 72 bp | GAAGGAGATGGCGGTGGCCGCCATGGCGTGGGTGGATaGCATTCCGTACTCTGCAATAATTCTCTTTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: EGDGGGRHGVGG*HSVLCNNSLFK Trigger: CTTGAAAAGAGAATTATTGCAGAGTACGGAATGCCATCCACCCACGCCATGGCGGCCACCGCCATCTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 72 bp | GGTAAGGGGTGGGATGTTCTGAATGACAGGAAGAGATaGGGTGGGCTTGGACACGAGCTGGAAGAAATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GKGWDVLNDRKR*GGLGHELEEMV Trigger: AACCATTTCTTCCAGCTCGTGTCCAAGCCCACCCCATCTCTTCCTGTCATTCAGAACATCCCACCCCTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS TCA 72 bp | ACCACAGCCATCATCAGGCCTAAAATGAAAGGGTACTaGTACCGGTCCATGGTAGAGATGAGGAGGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TTAIIRPKMKGY*YRSMVEMRRVK Trigger: CTTCACCCTCCTCATCTCTACCATGGACCGGTATCAGTACCCTTTCATTTTAGGCCTGATGATGGCTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CAA 90 bp | ACCAGTTGGCGAACCAAGAGGATCAACATGATTCCCACCATAAATTaGGTCAGACCTAAAACCAGCATGTCAGTGGTAAGGGGTGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: TSWRTKRINMIPTIN*VRPKTSMSVVRGGM Trigger: CATCCCACCCCTTACCACTGACATGCTGGTTTTAGGTCTGACCAAATTTATGGTGGGAATCATGTTGATCCTCTTGGTTCGCCAACTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CAA 90 bp | TCAATCTCTAGTCTTCGCCTGGCCTCCTTGTTCCTAGTAACCACCTaGAACCATGAGAATAATACTTGCAGGGAGAGCTTTTGCACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SISSLRLASLFLVTT*NHENNTCRESFCTS Trigger: ACTGGTGCAAAAGCTCTCCCTGCAAGTATTATTCTCATGGTTCAAGGTGGTTACTAGGAACAAGGAGGCCAGGCGAAGACTAGAGATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS GCA 72 bp | TTCCTAGTAACCACCTTGAACCATGAGAATAATACTTaGAGGGAGAGCTTTTGCACCAGTTGGCGAACCAAG | + |
|
Preference number: 6 (lower is better) Translates to: FLVTTLNHENNT*RESFCTSWRTK Trigger: CTTGGTTCGCCAACTGGTGCAAAAGCTCTCCCTGCAAGTATTATTCTCATGGTTCAAGGTGGTTACTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS CCA 72 bp | GAGAATAATACTTGCAGGGAGAGCTTTTGCACCAGTTaGCGAACCAAGAGGATCAACATGATTCCCACCATA | + |
|
Preference number: 6 (lower is better) Translates to: ENNTCRESFCTS*RTKRINMIPTI Trigger: TATGGTGGGAATCATGTTGATCCTCTTGGTTCGCCAACTGGTGCAAAAGCTCTCCCTGCAAGTATTATTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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| CDS GCA 72 bp | TTGAACCATGAGAATAATACTTGCAGGGAGAGCTTTTaGACCAGTTGGCGAACCAAGAGGATCAACATGATT | + |
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Preference number: 6 (lower is better) Translates to: LNHENNTCRESF*TSWRTKRINMI Trigger: AATCATGTTGATCCTCTTGGTTCGCCAACTGGTGCAAAAGCTCTCCCTGCAAGTATTATTCTCATGGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036172.10 |
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