Pregenerated sensors for SGPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021054Ensembl transcript IDs: ENSMUST00000021450.6, ENSMUST00000220285.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGAGAAGGAGAATGTGGGAAAGGTTGTGAGGAACACCAGGGACTaGGGCTTCCCTGGGAGGAAAGACTGGCTCACTCTCTCCCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: KEKENVGKVVRNTRD*GFPGRKDWLTLSLP Trigger: TGGAAGGGAGAGAGTGAGCCAGTCTTTCCTCCCAGGGAAGCCCCAGTCCCTGGTGTTCCTCACAACCTTTCCCACATTCTCCTTCTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR CCA 90 bp | ACCAAAGGCTATAGCATTCCCAGGGCTTCTGGACACTCCCAGCACTaGAGGGAAAGTTCGAGAAAGGCTGAGACACAGGCAGACCACAAA | + |
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Preference number: 1 (lower is better) Translates to: TKGYSIPRASGHSQH*RESSRKAETQADHK Trigger: TTTGTGGTCTGCCTGTGTCTCAGCCTTTCTCGAACTTTCCCTCCAGTGCTGGGAGTGTCCAGAAGCCCTGGGAATGCTATAGCCTTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR TCA 90 bp | CAGAGGCAGGGCCTCTCTGAGCTTGAGGGCAGCCAGGACATAGAGTaGGACCTAAACCAAACCAAACCTCACTCAAACAACAGCAGAACA | + |
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Preference number: 1 (lower is better) Translates to: QRQGLSELEGSQDIE*DLNQTKPHSNNSRT Trigger: TGTTCTGCTGTTGTTTGAGTGAGGTTTGGTTTGGTTTAGGTCTCACTCTATGTCCTGGCTGCCCTCAAGCTCAGAGAGGCCCTGCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR TCA 90 bp | CAGCACGTAAAAATGTGTGGTCTGAGTATAAAACAGGAGGAGCGGTaGGAGCGATGCCAATATTCCCACAGCCACGCAATCAGCTCACAC | + |
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Preference number: 1 (lower is better) Translates to: QHVKMCGLSIKQEER*ERCQYSHSHAISSH Trigger: GTGTGAGCTGATTGCGTGGCTGTGGGAATATTGGCATCGCTCTCACCGCTCCTCCTGTTTTATACTCAGACCACACATTTTTACGTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR TCA 90 bp | GACCTAAACCAAACCAAACCTCACTCAAACAACAGCAGAACAGTGTaGCCATCTGGTAGCCTTTCAGAGGTGACAGCACCAACTGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: DLNQTKPHSNNSRTV*PSGSLSEVTAPTVK Trigger: CTTCACAGTTGGTGCTGTCACCTCTGAAAGGCTACCAGATGGTCACACTGTTCTGCTGTTGTTTGAGTGAGGTTTGGTTTGGTTTAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR TCA 90 bp | AAACATTTGGTGAACATTCTAAATGGGCGCGCCATTTCTCAGCACTaGGAGAGCTCAGCCCACGTAAAACAACATCTGGTGTGCAATGAG | + |
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Preference number: 1 (lower is better) Translates to: KHLVNILNGRAISQH*ESSAHVKQHLVCNE Trigger: CTCATTGCACACCAGATGTTGTTTTACGTGGGCTGAGCTCTCTCAGTGCTGAGAAATGGCGCGCCCATTTAGAATGTTCACCAAATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| 3UTR TCA 90 bp | AATTCCCAGCAACCACATCTGTTCACAACCATCTGTAATGGGATCTaGTGCTCTCTTCTGGTGTGTCTGAAGACAGCAACGGTGTACTCA | + |
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Preference number: 1 (lower is better) Translates to: NSQQPHLFTTICNGI*CSLLVCLKTATVYS Trigger: TGAGTACACCGTTGCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGAACAGATGTGGTTGCTGGGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR CCA 90 bp | AGTAAGATTAAAAACCAGTCTAGATGGGCTGGGGAGTTGGCTCAATaGTTAAGACCACCGATTGCTCTTCCAGAGGTCCTGAGTTCAATT | + |
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Preference number: 1 (lower is better) Translates to: SKIKNQSRWAGELAQ*LRPPIALPEVLSSI Trigger: AATTGAACTCAGGACCTCTGGAAGAGCAATCGGTGGTCTTAACCATTGAGCCAACTCCCCAGCCCATCTAGACTGGTTTTTAATCTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR TCA 90 bp | TCACAACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTaGAGACAGCAACGGTGTACTCATATACATAAAATAAATAAATCT | + |
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Preference number: 1 (lower is better) Translates to: SQPSVMGSDALFWCV*RQQRCTHIHKINKS Trigger: AGATTTATTTATTTTATGTATATGAGTACACCGTTGCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGTAAGAGGCCATTCCAGTTTAGGGCAAATGGGGGAAGGGGCACCTGGCCGCAGGAACACCAGGGACTaGGGCTTCCCTGGGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: KVRGHSSLGQMGEGAPGRRNTRD*GFPGRK Trigger: TTTCCTCCCAGGGAAGCCCCAGTCCCTGGTGTTCCT...GCGGCCAGGTGCCCCTTCCCCCATTTGCCCTAAACTGGAATGGCCTCTTACCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR CCA 90 bp | CGATGCCAATATTCCCACAGCCACGCAATCAGCTCACACCGTGTTCTACGTGTGCCCTTCCCCCACTCCTaGAACTTGATGGCCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: RCQYSHSHAISSHRVLRVPFPHS*NLMAWG Trigger: CCCCCAGGCCATCAAGTTCCAGGAGTGGGGGAAGGG...CACACGTAGAACACGGTGTGAGCTGATTGCGTGGCTGTGGGAATATTGGCATCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGAATGTGGGAAAGGTTGTGAGGAACACCAGGGACTGGGGCTTCCCTGGGTCTCCCTTCCAGGAATaGCTTAGGAGAAGAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: KENVGKVVRNTRDWGFPGSPFQE*LRRRER Trigger: CCTTTCTCTTCTCCTAAGCCATTCCTGGAAGGGAGA...CCCAGGGAAGCCCCAGTCCCTGGTGTTCCTCACAACCTTTCCCACATTCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATCAGTGTGAGCCTTACCTCAGCTCTTGCTAGTCCTGTGCCTCTGTGCAAACCTGGGAGGAAAGACTaGCTCACTCTCTCCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RISVSLTSALASPVPLCKPGRKD*LTLSLP Trigger: TGGAAGGGAGAGAGTGAGCCAGTCTTTCCTCCCAGG...TTTGCACAGAGGCACAGGACTAGCAAGAGCTGAGGTAAGGCTCACACTGATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGGAGCGGTGAGAGCGATGCCAATATTCCCACAGCCACGCAATCAGCTCACTGTGAGAATCCTGAGTaGTTGGGAGAAAACGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: RRSGESDANIPTATQSAHCENPE*LGENVK Trigger: CTTGACGTTTTCTCCCAAGCACTCAGGATTCTCACA...GTGAGCTGATTGCGTGGCTGTGGGAATATTGGCATCGCTCTCACCGCTCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR CCA 90 bp | ACGTCAAGAAAACAACAGTCTTGTGACCTCAGTGTCTTCAGAGCTCAGAACTGCCATTCCCAGGGCTTCTaGACACTCCCAGCACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TSRKQQSCDLSVFRAQNCHSQGF*TLPALE Trigger: CTCCAGTGCTGGGAGTGTCCAGAAGCCCTGGGAATG...GCAGTTCTGAGCTCTGAAGACACTGAGGTCACAAGACTGTTGTTTTCTTGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAGAATCCTGAGTGCTTGGGAGAAAACGTCAAGAAAACAACAGTCTTGTGACGGACTGGGGCTTCCCTaGGAGGAAAGACTGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: VRILSAWEKTSRKQQSCDGLGLP*EERLAH Trigger: GTGAGCCAGTCTTTCCTCCCAGGGAAGCCCCAGTCC...GTCACAAGACTGTTGTTTTCTTGACGTTTTCTCCCAAGCACTCAGGATTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAGAGCGATGCCAATATTCCCACAGCCACGCAATCAGCTCACACCGTGTTCTAGTCCTGTGCCTCTGTaGAAAAACATGATTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: VRAMPIFPQPRNQLTPCSSPVPL*KNMILP Trigger: GGGCAAAATCATGTTTTTGCACAGAGGCACAGGACT...AGAACACGGTGTGAGCTGATTGCGTGGCTGTGGGAATATTGGCATCGCTCTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAGAATCCTGAGTGCTTGGGAGAAAACGTCAAGAAAACAACAGTCTTGTGACCTGAACGAGAAAGGCTaGGACACAGGCAGACCACAA | + |
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Preference number: 2 (lower is better) Translates to: VRILSAWEKTSRKQQSCDLNEKG*DTGRPQ Trigger: TTGTGGTCTGCCTGTGTCTCAGCCTTTCTCGTTCAG...GTCACAAGACTGTTGTTTTCTTGACGTTTTCTCCCAAGCACTCAGGATTCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR GCA 90 bp | CGATGCCAATATTCCCACAGCCACGCAATCAGCTCACACCGTGTTCTACGTGTGAGGATACTCTTGCTTTaGTCGTGTGTTCCTTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: RCQYSHSHAISSHRVLRVRILLL*SCVPLY Trigger: ATACAAAGGAACACACGAGCAAAGCAAGAGTATCCT...CACACGTAGAACACGGTGTGAGCTGATTGCGTGGCTGTGGGAATATTGGCATCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR CCA 90 bp | AAAACAGGAGGAGCGGTGAGAGCGATGCCAATATTCCCACAGCCACGCAATCAGGCAAATGAGGAAGGCTaGATTTTTCTTTCAGTCTAT | + |
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Preference number: 2 (lower is better) Translates to: KTGGAVRAMPIFPQPRNQANEEG*IFLSVY Trigger: ATAGACTGAAAGAAAAATCCAGCCTTCCTCATTTGC...CTGATTGCGTGGCTGTGGGAATATTGGCATCGCTCTCACCGCTCCTCCTGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR GCA 90 bp | ACATTTGGTGAACATTCTAAATGGGCGCGCCATTTCTCAGCACTGAGAGAGCTCTGTGCAATGAGAGAATaGACTGGCTGCAGAATTTAC | + |
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Preference number: 2 (lower is better) Translates to: TFGEHSKWARHFSALRELCAMRE*TGCRIY Trigger: GTAAATTCTGCAGCCAGTGCATTCTCTCATTGCACA...GAGCTCTCTCAGTGCTGAGAAATGGCGCGCCCATTTAGAATGTTCACCAAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| 3UTR CAA 90 bp | ACCTCAGCTCTTGCTAGTCCTGTGCCTCTGTGCAAAAACATGATTTaGCCCTGTGAAGCTTTTCCTTGTGATTATATAGAGCTTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: TSALASPVPLCKNMI*PCEAFPCDYIELAL Trigger: GAGAGCAAGCTCTATATAATCACAAGGAAAAGCTTCACAGGGCAAAATCATGTTTTTGCACAGAGGCACAGGACTAGCAAGAGCTGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR GCA 90 bp | ACATTTGGTGAACATTCTAAATGGGCGCGCCATTTCTCAGCACTGAGAGAGCTCAGAGAATGCACTGGCTaGAGAATTTACTTCTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: TFGEHSKWARHFSALRELRECTG*RIYFFK Trigger: CTTAAAGAAGTAAATTCTGCAGCCAGTGCATTCTCT...GAGCTCTCTCAGTGCTGAGAAATGGCGCGCCCATTTAGAATGTTCACCAAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| 3UTR-3UTR GCA 90 bp | ACGTCAAGAAAACAACAGTCTTGTGACCTCAGTGTCTTCAGAGCTCAGAACTGCAAACAGAAAAGAAACTaGCTTCCCAGGATACTCTTG | + |
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Preference number: 2 (lower is better) Translates to: TSRKQQSCDLSVFRAQNCKQKRN*LPRILL Trigger: CAAGAGTATCCTGGGAAGGCAGTTTCTTTTCTGTTT...GCAGTTCTGAGCTCTGAAGACACTGAGGTCACAAGACTGTTGTTTTCTTGACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR CAA 90 bp | TTTCTTCTCCTGGTGGCCAAAGGGTCCAAATTTACTTGCTTAAAGTaGATCAGATTCTTTGTGGGTAAAAACTACCAAGCCCCCAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: FLLLVAKGSKFTCLK*IRFFVGKNYQAPKL Trigger: AAGCTTGGGGGCTTGGTAGTTTTTACCCACAAAGAATCTGATCAACTTTAAGCAAGTAAATTTGGACCCTTTGGCCACCAGGAGAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGATGATGTGGCTTATGATAGAATTAGAGTGTCACTTTTATATCACAGTAGTAAATGAAGGGAGCTaGCAGTGTGGGGAGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: CLMMWLMIELECHFYITVVNEGS*QCGERQ Trigger: CTGTCTCTCCCCACACTGCCAGCTCCCTTCATTTAC...TACTGTGATATAAAAGTGACACTCTAATTCTATCATAAGCCACATCATCAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| 3UTR-3UTR CCA 90 bp | CACACAAAAATTAATAGCATAACAGACCCAAAGTGGGGGACCCTGTCTATAGCTACTTCCCCCAAAACTTaGTCCATTAGAAATGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: HTKINSITDPKWGTLSIATSPKT*SIRNAS Trigger: AGAGGCATTTCTAATGGACCAAGTTTTGGGGGAAGT...AGCTATAGACAGGGTCCCCCACTTTGGGTCTGTTATGCTATTAATTTTTGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGAGACCTAAACCAAACCAAACCTCACTCAAACAACAGCAGAACAGTGTGAGAATCCTGAGTGCTTaGGAGAAAACGTCAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: RVRPKPNQTSLKQQQNSVRILSA*EKTSRK Trigger: TTTTCTTGACGTTTTCTCCCAAGCACTCAGGATTCT...CACACTGTTCTGCTGTTGTTTGAGTGAGGTTTGGTTTGGTTTAGGTCTCACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGATGATGTGGCTTATGATAGAATTAGAGTGTCACTTTTATATCACAGTAAAACAACATCTGGTGTaGAATGAGAGAATGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: CLMMWLMIELECHFYITVKQHLV*NERMHW Trigger: CCAGTGCATTCTCTCATTGCACACCAGATGTTGTTT...TACTGTGATATAAAAGTGACACTCTAATTCTATCATAAGCCACATCATCAGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| 3UTR CCA 72 bp | AAAGGTTGTGAGGAACACCAGGGACTGGGGCTTCCCTaGGAGGAAAGACTGGCTCACTCTCTCCCTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: KGCEEHQGLGLP*EERLAHSLPSR Trigger: CCTGGAAGGGAGAGAGTGAGCCAGTCTTTCCTCCCAGGGAAGCCCCAGTCCCTGGTGTTCCTCACAACCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR TCA 72 bp | TGTGCTCTCGTGCTCCTCCTAGGAGGAGGATCAGTGTaGGCCTTACCTCAGCTCTTGCTAGTCCTGTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: CALVLLLGGGSV*ALPQLLLVLCL Trigger: GAGGCACAGGACTAGCAAGAGCTGAGGTAAGGCTCACACTGATCCTCCTCCTAGGAGGAGCACGAGAGCACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR CCA 72 bp | GAGAATGTGGGAAAGGTTGTGAGGAACACCAGGGACTaGGGCTTCCCTGGGAGGAAAGACTGGCTCACTCTC | + |
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Preference number: 3 (lower is better) Translates to: ENVGKVVRNTRD*GFPGRKDWLTL Trigger: GAGAGTGAGCCAGTCTTTCCTCCCAGGGAAGCCCCAGTCCCTGGTGTTCCTCACAACCTTTCCCACATTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR CCA 72 bp | GACCCTGTCTATAGCTCAACTCACAGAGCACATCTGTaGAGCAATCCCTGCTCTCCGCAGCTTCTGAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: DPVYSSTHRAHL*SNPCSPQLLSS Trigger: GGAGCTCAGAAGCTGCGGAGAGCAGGGATTGCTCCACAGATGTGCTCTGTGAGTTGAGCTATAGACAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| 3UTR GCA 72 bp | TCAGTGTCTTCAGAGCTCAGAACTGCGTGTAGAATGTaGTCTCGTGCTCCTCCTAGGAGGAGGATCAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SVSSELRTACRM*SRAPPRRRISV Trigger: CACACTGATCCTCCTCCTAGGAGGAGCACGAGAGCACATTCTACACGCAGTTCTGAGCTCTGAAGACACTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR GCA 72 bp | GGCTGGGGAGTTGGCTCAATGGTTAAGACCACCGATTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GWGVGSMVKTTD*SSRGPEFNSQQ Trigger: TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCGGTGGTCTTAACCATTGAGCCAACTCCCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAGGAGCGGTGAGAGCGATGCCAATATTCCCACAGCCACGCAATCAGCTCACTCTACGTGTGGAGCATaGTCAGCACAGTCTAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: RRSGESDANIPTATQSAHSTCGA*SAQSKN Trigger: ATTCTTAGACTGTGCTGACAATGCTCCACACGTAGA...GTGAGCTGATTGCGTGGCTGTGGGAATATTGGCATCGCTCTCACCGCTCCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR TCA 72 bp | ACACTCCCAGCACTGGAGGGAAAGTTCGAGAAAGGCTaGGACACAGGCAGACCACAAATCATGATCCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: TLPALEGKFEKG*DTGRPQIMILN Trigger: GTTCAGGATCATGATTTGTGGTCTGCCTGTGTCTCAGCCTTTCTCGAACTTTCCCTCCAGTGCTGGGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR TCA 72 bp | GGCCTCTCTGAGCTTGAGGGCAGCCAGGACATAGAGTaGGACCTAAACCAAACCAAACCTCACTCAAACAAC | + |
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Preference number: 3 (lower is better) Translates to: GLSELEGSQDIE*DLNQTKPHSNN Trigger: GTTGTTTGAGTGAGGTTTGGTTTGGTTTAGGTCTCACTCTATGTCCTGGCTGCCCTCAAGCTCAGAGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR TCA 72 bp | GTGAACATTCTAAATGGGCGCGCCATTTCTCAGCACTaGGAGAGCTCAGCCCACGTAAAACAACATCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: VNILNGRAISQH*ESSAHVKQHLV Trigger: CACCAGATGTTGTTTTACGTGGGCTGAGCTCTCTCAGTGCTGAGAAATGGCGCGCCCATTTAGAATGTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| 3UTR TCA 72 bp | GGCAGACCACAAATCATGATCCTGAACGAGAAAGGCTaGGACACAGGCAGACCACAAATCATGATCCTGACC | + |
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Preference number: 3 (lower is better) Translates to: GRPQIMILNEKG*DTGRPQIMILT Trigger: GGTCAGGATCATGATTTGTGGTCTGCCTGTGTCTCAGCCTTTCTCGTTCAGGATCATGATTTGTGGTCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR CCA 72 bp | CACAGAACTCCCCAAACATTTGGTGAACATTCTAAATaGGCGCGCCATTTCTCAGCACTGAGAGAGCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: HRTPQTFGEHSK*ARHFSALRELS Trigger: GCTGAGCTCTCTCAGTGCTGAGAAATGGCGCGCCCATTTAGAATGTTCACCAAATGTTTGGGGAGTTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| 3UTR TCA 72 bp | AAAATGTGTGGTCTGAGTATAAAACAGGAGGAGCGGTaGGAGCGATGCCAATATTCCCACAGCCACGCAATC | + |
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Preference number: 3 (lower is better) Translates to: KMCGLSIKQEER*ERCQYSHSHAI Trigger: GATTGCGTGGCTGTGGGAATATTGGCATCGCTCTCACCGCTCCTCCTGTTTTATACTCAGACCACACATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR TCA 72 bp | CAAACCAAACCTCACTCAAACAACAGCAGAACAGTGTaGCCATCTGGTAGCCTTTCAGAGGTGACAGCACCA | + |
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Preference number: 3 (lower is better) Translates to: QTKPHSNNSRTV*PSGSLSEVTAP Trigger: TGGTGCTGTCACCTCTGAAAGGCTACCAGATGGTCACACTGTTCTGCTGTTGTTTGAGTGAGGTTTGGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR TCA 72 bp | CAACCACATCTGTTCACAACCATCTGTAATGGGATCTaGTGCTCTCTTCTGGTGTGTCTGAAGACAGCAACG | + |
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Preference number: 3 (lower is better) Translates to: QPHLFTTICNGI*CSLLVCLKTAT Trigger: CGTTGCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGAACAGATGTGGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR TCA 72 bp | TGCTTGGGAGAAAACGTCAAGAAAACAACAGTCTTGTaGCCTCAGTGTCTTCAGAGCTCAGAACTGCGTGTA | + |
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Preference number: 3 (lower is better) Translates to: CLGENVKKTTVL*PQCLQSSELRV Trigger: TACACGCAGTTCTGAGCTCTGAAGACACTGAGGTCACAAGACTGTTGTTTTCTTGACGTTTTCTCCCAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR CCA 72 bp | TTTGGTGATGTTAGACAGACAGCACGTAAAAATGTGTaGTCTGAGTATAAAACAGGAGGAGCGGTGAGAGCG | + |
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Preference number: 3 (lower is better) Translates to: FGDVRQTARKNV*SEYKTGGAVRA Trigger: CGCTCTCACCGCTCCTCCTGTTTTATACTCAGACCACACATTTTTACGTGCTGTCTGTCTAACATCACCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR GCA 72 bp | CAGAAAAGAAACTGCCTTCCCAGGATACTCTTGCTTTaGTCGTGTGTTCCTTTGTATCGACAACAGGTCATA | + |
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Preference number: 3 (lower is better) Translates to: QKRNCLPRILLL*SCVPLYRQQVI Trigger: TATGACCTGTTGTCGATACAAAGGAACACACGAGCAAAGCAAGAGTATCCTGGGAAGGCAGTTTCTTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR GCA 72 bp | TTAAACAGAAAAGAAACTGCCTTCCCAGGATACTCTTaGTTTGCTCGTGTGTTCCTTTGTATCGACAACAGG | + |
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Preference number: 3 (lower is better) Translates to: LNRKETAFPGYS*FARVFLCIDNR Trigger: CCTGTTGTCGATACAAAGGAACACACGAGCAAAGCAAGAGTATCCTGGGAAGGCAGTTTCTTTTCTGTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| 3UTR-3UTR CAA 90 bp | CACACAAAAATTAATAGCATAACAGACCCAAAGTGGGGGACCCTGTCTATAGCTCCACCTGGTGTTCATTaGTATGGAAAATTAATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HTKINSITDPKWGTLSIAPPGVH*YGKLIL Trigger: GAGAATTAATTTTCCATACAAATGAACACCAGGTGG...AGCTATAGACAGGGTCCCCCACTTTGGGTCTGTTATGCTATTAATTTTTGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| 3UTR TCA 72 bp | TCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTaGAGACAGCAACGGTGTACTCATATACATAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: SVMGSDALFWCV*RQQRCTHIHKI Trigger: TATTTTATGTATATGAGTACACCGTTGCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| 3UTR GCA 72 bp | AACAACATCTGGTGTGCAATGAGAGAATGCACTGGCTaGAGAATTTACTTCTTTAAGTCAAATTCTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NNIWCAMRECTG*RIYFFKSNSCR Trigger: TCTGCAAGAATTTGACTTAAAGAAGTAAATTCTGCAGCCAGTGCATTCTCTCATTGCACACCAGATGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGATGATGTGGCTTATGATAGAATTAGAGTGTCACTTTTATATCACAGTAGAACTCCCCAAACATTaGGTGAACATTCTAAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: CLMMWLMIELECHFYITVELPKH*VNILNG Trigger: CCCATTTAGAATGTTCACCAAATGTTTGGGGAGTTC...TACTGTGATATAAAAGTGACACTCTAATTCTATCATAAGCCACATCATCAGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| 3UTR TCA 72 bp | AGGAAGGGTATACACTGTCTCATCTATAAATTTCAGTaGTGTTTCCACTCCCTGGAAGTATTTATTTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: RKGIHCLIYKFQ*CFHSLEVFICT Trigger: AGTACAAATAAATACTTCCAGGGAGTGGAAACATCACTGAAATTTATAGATGAGACAGTGTATACCCTTCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR CCA 90 bp | AAGGAGAATGTGGGAAAGGTTGTGAGGAACACCAGGGACTGGGGCTTCCCTGGGCGGCGAGGCCGGCCGTaGCCAGCGGATGATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KENVGKVVRNTRDWGFPGRRGRP*PADDVL Trigger: AAGGACATCATCCGCTGGCCACGGCCGGCCTCGCCG...CCCAGGGAAGCCCCAGTCCCTGGTGTTCCTCACAACCTTTCCCACATTCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGACACTCCCAGCACTGGAGGGAAAGTTCGAGAAAGGCTGAGACACAGGAAGCTCGCCACCCGCTaGGGCTCCTGCAGACGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLDTPSTGGKVRERLRHRKLATR*GSCRRL Trigger: CAGCCGTCTGCAGGAGCCGCAGCGGGTGGCGAGCTT...CCTGTGTCTCAGCCTTTCTCGAACTTTCCCTCCAGTGCTGGGAGTGTCCAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTAAGAGGCCATTCCAGTTTAGGGCAAATGGGGGAAGGGGCACCTGGCCGCGCAAGTTGCTCACTTTaGCCAGCTCGCCCTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KVRGHSSLGQMGEGAPGRASCSL*PARPPR Trigger: GCGAGGAGGGCGAGCTGGTCAAAGTGAGCAACTTGC...GCGGCCAGGTGCCCCTTCCCCCATTTGCCCTAAACTGGAATGGCCTCTTACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR CCA 90 bp | AAAACAGGAGGAGCGGTGAGAGCGATGCCAATATTCCCACAGCCACGCAATCAGGCTCCTGCAGACGGCTaGCCAGCAGAGCCAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTGGAVRAMPIFPQPRNQAPADG*PAEPAA Trigger: AGCGGCTGGCTCTGCTGGCCAGCCGTCTGCAGGAGC...CTGATTGCGTGGCTGTGGGAATATTGGCATCGCTCTCACCGCTCCTCCTGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGCGGTGAGAGCGATGCCAATATTCCCACAGCCACGCAATCAGCTCACTGGCGGTGCCTGACATaGCATGCGTGGAGGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RRSGESDANIPTATQSAHWRCLT*HAWRAC Trigger: GCATGCCCTCCACGCATGCCATGTCAGGCACCGCCA...GTGAGCTGATTGCGTGGCTGTGGGAATATTGGCATCGCTCTCACCGCTCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGCGGTGAGAGCGATGCCAATATTCCCACAGCCACGCAATCAGCTCACGCAGGAACATGGCGATaGGGATGGCGGTGCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RRSGESDANIPTATQSAHAGTWR*GWRCLT Trigger: TGTCAGGCACCGCCATCCCCATCGCCATGTTCCTGC...GTGAGCTGATTGCGTGGCTGTGGGAATATTGGCATCGCTCTCACCGCTCCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR GCA 90 bp | AGGATCAGTGTGAGCCTTACCTCAGCTCTTGCTAGTCCTGTGCCTCTGTGCAAACGATGGGGATGGCGGTaGCTGACATGGCATGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RISVSLTSALASPVPLCKRWGWR*LTWHAW Trigger: CCACGCATGCCATGTCAGGCACCGCCATCCCCATCG...TTTGCACAGAGGCACAGGACTAGCAAGAGCTGAGGTAAGGCTCACACTGATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR CCA 90 bp | TGTAACAGCACAGAACTCCCCAAACATTTGGTGAACATTCTAAATGGGCGCGCCGCTCCTGCAGACGGCTaGCCAGCAGAGCCAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CNSTELPKHLVNILNGRAAPADG*PAEPAA Trigger: AGCGGCTGGCTCTGCTGGCCAGCCGTCTGCAGGAGC...GGCGCGCCCATTTAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR CCA 90 bp | ACGTCAAGAAAACAACAGTCTTGTGACCTCAGTGTCTTCAGAGCTCAGAACTGCCGCAGCAGTCCGCCTTaGCGGGGCTGTCCTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSRKQQSCDLSVFRAQNCRSSPP*RGCPQR Trigger: GCGCTGAGGACAGCCCCGCCAAGGCGGACTGCTGCG...GCAGTTCTGAGCTCTGAAGACACTGAGGTCACAAGACTGTTGTTTTCTTGACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTGGTGAACATTCTAAATGGGCGCGCCATTTCTCAGCACTGAGAGAGCTCCGGCGAGGCCGGCCGTaGCCAGCGGATGATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TFGEHSKWARHFSALRELRRGRP*PADDVL Trigger: AAGGACATCATCCGCTGGCCACGGCCGGCCTCGCCG...GAGCTCTCTCAGTGCTGAGAAATGGCGCGCCCATTTAGAATGTTCACCAAATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR TCA 90 bp | TGTAACAGCACAGAACTCCCCAAACATTTGGTGAACATTCTAAATGGGCGCGCCGCCGTGGCCAGCGGATaGTGTCCTTGGTGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CNSTELPKHLVNILNGRAAVASG*CPWCTG Trigger: GCCAGTGCACCAAGGACATCATCCGCTGGCCACGGC...GGCGCGCCCATTTAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR GCA 90 bp | CGATGCCAATATTCCCACAGCCACGCAATCAGCTCACACCGTGTTCTACGTGTGGTGCCTGACATGGCATaGGTGGAGGGCATGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RCQYSHSHAISSHRVLRVVPDMA*VEGMLY Trigger: ATACAGCATGCCCTCCACGCATGCCATGTCAGGCAC...CACACGTAGAACACGGTGTGAGCTGATTGCGTGGCTGTGGGAATATTGGCATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR GCA 90 bp | TGTAACAGCACAGAACTCCCCAAACATTTGGTGAACATTCTAAATGGGCGCGCCCGATGGGGATGGCGGTaGCTGACATGGCATGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CNSTELPKHLVNILNGRARWGWR*LTWHAW Trigger: CCACGCATGCCATGTCAGGCACCGCCATCCCCATCG...GGCGCGCCCATTTAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR CCA 90 bp | CACACAAAAATTAATAGCATAACAGACCCAAAGTGGGGGACCCTGTCTATAGCTCGCAGCAGTCCGCCTTaGCGGGGCTGTCCTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HTKINSITDPKWGTLSIARSSPP*RGCPQR Trigger: GCGCTGAGGACAGCCCCGCCAAGGCGGACTGCTGCG...AGCTATAGACAGGGTCCCCCACTTTGGGTCTGTTATGCTATTAATTTTTGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR CCA 90 bp | ACATTTGGTGAACATTCTAAATGGGCGCGCCATTTCTCAGCACTGAGAGAGCTCTGGCGGTGCCTGACATaGCATGCGTGGAGGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TFGEHSKWARHFSALRELWRCLT*HAWRAC Trigger: GCATGCCCTCCACGCATGCCATGTCAGGCACCGCCA...GAGCTCTCTCAGTGCTGAGAAATGGCGCGCCCATTTAGAATGTTCACCAAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR TCA 90 bp | GTGAGAATCCTGAGTGCTTGGGAGAAAACGTCAAGAAAACAACAGTCTTGTGACGCCGTGGCCAGCGGATaGTGTCCTTGGTGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRILSAWEKTSRKQQSCDAVASG*CPWCTG Trigger: GCCAGTGCACCAAGGACATCATCCGCTGGCCACGGC...GTCACAAGACTGTTGTTTTCTTGACGTTTTCTCCCAAGCACTCAGGATTCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR GCA 90 bp | CACACAAAAATTAATAGCATAACAGACCCAAAGTGGGGGACCCTGTCTATAGCTAAGCTCGCCACCCGCTaGGGCTCCTGCAGACGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTKINSITDPKWGTLSIAKLATR*GSCRRL Trigger: CAGCCGTCTGCAGGAGCCGCAGCGGGTGGCGAGCTT...AGCTATAGACAGGGTCCCCCACTTTGGGTCTGTTATGCTATTAATTTTTGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR GCA 90 bp | CGATGCCAATATTCCCACAGCCACGCAATCAGCTCACACCGTGTTCTACGTGTGCGTTGCCCAGTTCCGTaGCTAAGCAGAACAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RCQYSHSHAISSHRVLRVRCPVP*LSRTGS Trigger: ACTACCTGTTCTGCTTAGGCACGGAACTGGGCAACG...CACACGTAGAACACGGTGTGAGCTGATTGCGTGGCTGTGGGAATATTGGCATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTGGTGAACATTCTAAATGGGCGCGCCATTTCTCAGCACTGAGAGAGCTCCTGACATGGCATGCGTaGAGGGCATGCTGTATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TFGEHSKWARHFSALRELLTWHA*RACCIP Trigger: CGGAATACAGCATGCCCTCCACGCATGCCATGTCAG...GAGCTCTCTCAGTGCTGAGAAATGGCGCGCCCATTTAGAATGTTCACCAAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR CCA 90 bp | CACACAAAAATTAATAGCATAACAGACCCAAAGTGGGGGACCCTGTCTATAGCTGCAGGAACATGGCGATaGGGATGGCGGTGCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: HTKINSITDPKWGTLSIAAGTWR*GWRCLT Trigger: TGTCAGGCACCGCCATCCCCATCGCCATGTTCCTGC...AGCTATAGACAGGGTCCCCCACTTTGGGTCTGTTATGCTATTAATTTTTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR TCA 90 bp | TGCCTGATGATGTGGCTTATGATAGAATTAGAGTGTCACTTTTATATCACAGTAGGGGATGGCGGTGCCTaGCATGGCATGCGTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLMMWLMIELECHFYITVGDGGA*HGMRGG Trigger: CCCTCCACGCATGCCATGTCAGGCACCGCCATCCCC...TACTGTGATATAAAAGTGACACTCTAATTCTATCATAAGCCACATCATCAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| 3UTR CAA 72 bp | AGGGGTCACAAGGCAGAGCGTTATCGGCAGCAGAGTTaGGTGATGTTAGACAGACAGCACGTAAAAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGHKAERYRQQS*VMLDRQHVKMC Trigger: ACACATTTTTACGTGCTGTCTGTCTAACATCACCAAACTCTGCTGCCGATAACGCTCTGCCTTGTGACCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR CCA 90 bp | CACACAAAAATTAATAGCATAACAGACCCAAAGTGGGGGACCCTGTCTATAGCTATGTCCTTGGTGCACTaGCCCAGGTACATGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTKINSITDPKWGTLSIAMSLVH*PRYMTS Trigger: GCTGGTCATGTACCTGGGCCAGTGCACCAAGGACAT...AGCTATAGACAGGGTCCCCCACTTTGGGTCTGTTATGCTATTAATTTTTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR CCA 90 bp | TGTAACAGCACAGAACTCCCCAAACATTTGGTGAACATTCTAAATGGGCGCGCCGGTAATATACCGGTATaGCAGCTCCACTTCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: CNSTELPKHLVNILNGRAGNIPV*QLHFHV Trigger: CACATGGAAGTGGAGCTGCCATACCGGTATATTACC...GGCGCGCCCATTTAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR TCA 90 bp | TGTAACAGCACAGAACTCCCCAAACATTTGGTGAACATTCTAAATGGGCGCGCCATGCCCAAAATTAAGTaGAGCCCGATGATGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CNSTELPKHLVNILNGRAMPKIK*SPMMMS Trigger: GCTCATCATCATCGGGCTTCACTTAATTTTGGGCAT...GGCGCGCCCATTTAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR TCA 90 bp | CACACAAAAATTAATAGCATAACAGACCCAAAGTGGGGGACCCTGTCTATAGCTAGGGGACCAAAAACGTaGTGGAGAACCCAACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HTKINSITDPKWGTLSIARGPKT*WRTQPS Trigger: GGATGGTTGGGTTCTCCATCACGTTTTTGGTCCCCT...AGCTATAGACAGGGTCCCCCACTTTGGGTCTGTTATGCTATTAATTTTTGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR GCA 90 bp | CACACAAAAATTAATAGCATAACAGACCCAAAGTGGGGGACCCTGTCTATAGCTCGTTGCCCAGTTCCGTaGCTAAGCAGAACAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTKINSITDPKWGTLSIARCPVP*LSRTGS Trigger: ACTACCTGTTCTGCTTAGGCACGGAACTGGGCAACG...AGCTATAGACAGGGTCCCCCACTTTGGGTCTGTTATGCTATTAATTTTTGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR CCA 90 bp | ATTTTGCCCTGTGAAGCTTTTCCTTGTGATTATATAGAGCTTGCTCTCCAGAGACTGACATGGCATGCGTaGAGGGCATGCTGTATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILPCEAFPCDYIELALQRLTWHA*RACCIP Trigger: CGGAATACAGCATGCCCTCCACGCATGCCATGTCAG...TCTCTGGAGAGCAAGCTCTATATAATCACAAGGAAAAGCTTCACAGGGCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR CCA 90 bp | TGTAACAGCACAGAACTCCCCAAACATTTGGTGAACATTCTAAATGGGCGCGCCCATGACACGGAATACTaGAGAGTTTACAGGCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CNSTELPKHLVNILNGRAHDTEY*RVYRLE Trigger: CTCTAGCCTGTAAACTCTCCAGTATTCCGTGTCATG...GGCGCGCCCATTTAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR TCA 90 bp | TGCCTGATGATGTGGCTTATGATAGAATTAGAGTGTCACTTTTATATCACAGTAGCAAGTTGCTCACTTTaGCCAGCTCGCCCTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CLMMWLMIELECHFYITVASCSL*PARPPR Trigger: GCGAGGAGGGCGAGCTGGTCAAAGTGAGCAACTTGC...TACTGTGATATAAAAGTGACACTCTAATTCTATCATAAGCCACATCATCAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR GCA 90 bp | CACACAAAAATTAATAGCATAACAGACCCAAAGTGGGGGACCCTGTCTATAGCTTCCACTTCCATGTGCTaGCTTGCTTGGCGAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTKINSITDPKWGTLSIASTSMC*LAWRMS Trigger: TGACATTCGCCAAGCAAGGCAGCACATGGAAGTGGA...AGCTATAGACAGGGTCCCCCACTTTGGGTCTGTTATGCTATTAATTTTTGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| 3UTR CAA 72 bp | AGTAAGATTAAAAACCAGTCTAGATGGGCTGGGGAGTaGGCTCAATGGTTAAGACCACCGATTGCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKIKNQSRWAGE*AQWLRPPIALP Trigger: TGGAAGAGCAATCGGTGGTCTTAACCATTGAGCCAACTCCCCAGCCCATCTAGACTGGTTTTTAATCTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| 3UTR CAA 72 bp | ACAGAAAAGAAACTGCCTTCCCAGGATACTCTTGCTTaGCTCGTGTGTTCCTTTGTATCGACAACAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TEKKLPSQDTLA*LVCSFVSTTGH Trigger: ATGACCTGTTGTCGATACAAAGGAACACACGAGCAAAGCAAGAGTATCCTGGGAAGGCAGTTTCTTTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR GCA 90 bp | ATAACTACAATTTGTAACAGCACAGAACTCCCCAAACATTTGGTGAACATTCTAGTGCCTGACATGGCATaGGTGGAGGGCATGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ITTICNSTELPKHLVNILVPDMA*VEGMLY Trigger: ATACAGCATGCCCTCCACGCATGCCATGTCAGGCAC...TAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACAAATTGTAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| 3UTR CAA 72 bp | ACTACAATTTGTAACAGCACAGAACTCCCCAAACATTaGGTGAACATTCTAAATGGGCGCGCCATTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTICNSTELPKH*VNILNGRAISQ Trigger: CTGAGAAATGGCGCGCCCATTTAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACAAATTGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| 3UTR CAA 72 bp | CTTCCCAGGATACTCTTGCTTTGCTCGTGTGTTCCTTaGTATCGACAACAGGTCATACTAATCATTCGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LPRILLLCSCVP*YRQQVILIIRL Trigger: AAGTCGAATGATTAGTATGACCTGTTGTCGATACAAAGGAACACACGAGCAAAGCAAGAGTATCCTGGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| 3UTR CAA 72 bp | CTTGCTAGTCCTGTGCCTCTGTGCAAAAACATGATTTaGCCCTGTGAAGCTTTTCCTTGTGATTATATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LASPVPLCKNMI*PCEAFPCDYIE Trigger: CTCTATATAATCACAAGGAAAAGCTTCACAGGGCAAAATCATGTTTTTGCACAGAGGCACAGGACTAGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
||
| CDS-3UTR GCA 90 bp | TGCCTGATGATGTGGCTTATGATAGAATTAGAGTGTCACTTTTATATCACAGTACATGCGTGGAGGGCATaGTGTATTCCGAGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLMMWLMIELECHFYITVHAWRA*CIPSCR Trigger: TCTACAACTCGGAATACAGCATGCCCTCCACGCATG...TACTGTGATATAAAAGTGACACTCTAATTCTATCATAAGCCACATCATCAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR TCA 90 bp | ATAACTACAATTTGTAACAGCACAGAACTCCCCAAACATTTGGTGAACATTCTATCCAGGTGTCAAGGGTaGAAGAGAAGATGCCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ITTICNSTELPKHLVNILSRCQG*KRRCPK Trigger: TTTTGGGCATCTTCTCTTTCACCCTTGACACCTGGA...TAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACAAATTGTAGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS-3UTR GCA 90 bp | ATAACTACAATTTGTAACAGCACAGAACTCCCCAAACATTTGGTGAACATTCTAGCTAAGGGTAACATGTaGAGAGAAGGTTCTAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ITTICNSTELPKHLVNILAKGNM*REGSKD Trigger: ATCCTTAGAACCTTCTCTGCACATGTTACCCTTAGC...TAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACAAATTGTAGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
||
| CDS GCA 90 bp | AGCGGCACCTCCACCCCACACAGACGCTGGAAGCTCGCCACCCGCTaGGGCTCCTGCAGACGGCTGGCCAGCAGAGCCAGCCGCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGTSTPHRRWKLATR*GSCRRLASRASRCP Trigger: GGGGCAGCGGCTGGCTCTGCTGGCCAGCCGTCTGCAGGAGCCGCAGCGGGTGGCGAGCTTCCAGCGTCTGTGTGGGGTGGAGGTGCCGCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
||
| CDS CCA 90 bp | GGCGGCGAGGCCGGCCGTGGCCAGCGGATGATGTCCTTGGTGCACTaGCCCAGGTACATGACCAGCACCCAGATGATCACCAGCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GGEAGRGQRMMSLVH*PRYMTSTQMITSLR Trigger: CCGGAGGCTGGTGATCATCTGGGTGCTGGTCATGTACCTGGGCCAGTGCACCAAGGACATCATCCGCTGGCCACGGCCGGCCTCGCCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS-3UTR CAA 90 bp | CTTCTGGACACTCCCAGCACTGGAGGGAAAGTTCGAGAAAGGCTGAGACACAGGCCGCAGCAGTCCGCCTaGGCGGGGCTGTCCTCAGCG | + |
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Preference number: 5 (lower is better) Translates to: LLDTPSTGGKVRERLRHRPQQSA*AGLSSA Trigger: CGCTGAGGACAGCCCCGCCAAGGCGGACTGCTGCGG...CCTGTGTCTCAGCCTTTCTCGAACTTTCCCTCCAGTGCTGGGAGTGTCCAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| CDS TCA 90 bp | CCGTGCCTAAGCAGAACAGGTAGTAGAGCGGCAAGTTGCTCACTTTaGCCAGCTCGCCCTCCTCGCCCGTCAACGAGTTGCGGCGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: PCLSRTGSRAASCSL*PARPPRPSTSCGAA Trigger: CGCAGCGCCGCAACTCGTTGACGGGCGAGGAGGGCGAGCTGGTCAAAGTGAGCAACTTGCCGCTCTACTACCTGTTCTGCTTAGGCACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS CCA 90 bp | GTTGTAGAAGACCTCCAGCTTGATGACAGGCGGCGAGGCCGGCCGTaGCCAGCGGATGATGTCCTTGGTGCACTGGCCCAGGTACATGAC | + |
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Preference number: 5 (lower is better) Translates to: VVEDLQLDDRRRGRP*PADDVLGALAQVHD Trigger: GTCATGTACCTGGGCCAGTGCACCAAGGACATCATCCGCTGGCCACGGCCGGCCTCGCCGCCTGTCATCAAGCTGGAGGTCTTCTACAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS-3UTR CAA 90 bp | ACATTTGGTGAACATTCTAAATGGGCGCGCCATTTCTCAGCACTGAGAGAGCTCTCGGCCGCCAGCCCGTaGCGCACGCCGTTCGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TFGEHSKWARHFSALRELSAASP*RTPFGA Trigger: TGCCCCGAACGGCGTGCGCAACGGGCTGGCGGCCGA...GAGCTCTCTCAGTGCTGAGAAATGGCGCGCCCATTTAGAATGTTCACCAAATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS TCA 90 bp | GCGGCCATAGGTGAGCAGGAACATGGCGATGGGGATGGCGGTGCCTaGCATGGCATGCGTGGAGGGCATGCTGTATTCCGAGTTGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: AAIGEQEHGDGDGGA*HGMRGGHAVFRVVE Trigger: TTCTACAACTCGGAATACAGCATGCCCTCCACGCATGCCATGTCAGGCACCGCCATCCCCATCGCCATGTTCCTGCTCACCTATGGCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS-3UTR CAA 90 bp | GTGAGAATCCTGAGTGCTTGGGAGAAAACGTCAAGAAAACAACAGTCTTGTGACTCGGCCGCCAGCCCGTaGCGCACGCCGTTCGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: VRILSAWEKTSRKQQSCDSAASP*RTPFGA Trigger: TGCCCCGAACGGCGTGCGCAACGGGCTGGCGGCCGA...GTCACAAGACTGTTGTTTTCTTGACGTTTTCTCCCAAGCACTCAGGATTCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| CDS-3UTR CAA 90 bp | CTTCTGGACACTCCCAGCACTGGAGGGAAAGTTCGAGAAAGGCTGAGACACAGGCAGCGGATGATGTCCTaGGTGCACTGGCCCAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: LLDTPSTGGKVRERLRHRQRMMS*VHWPRY Trigger: GTACCTGGGCCAGTGCACCAAGGACATCATCCGCTG...CCTGTGTCTCAGCCTTTCTCGAACTTTCCCTCCAGTGCTGGGAGTGTCCAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220285.2 |
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| CDS-3UTR CAA 90 bp | ACATTTGGTGAACATTCTAAATGGGCGCGCCATTTCTCAGCACTGAGAGAGCTCGGCAAGTTGCTCACTTaGACCAGCTCGCCCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: TFGEHSKWARHFSALRELGKLLT*TSSPSS Trigger: CGAGGAGGGCGAGCTGGTCAAAGTGAGCAACTTGCC...GAGCTCTCTCAGTGCTGAGAAATGGCGCGCCCATTTAGAATGTTCACCAAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS-3UTR CAA 90 bp | TGTAACAGCACAGAACTCCCCAAACATTTGGTGAACATTCTAAATGGGCGCGCCCAGCGGATGATGTCCTaGGTGCACTGGCCCAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: CNSTELPKHLVNILNGRAQRMMS*VHWPRY Trigger: GTACCTGGGCCAGTGCACCAAGGACATCATCCGCTG...GGCGCGCCCATTTAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS CCA 90 bp | AAACGTGATGGAGAACCCAACCATCCCGTAGGTAATATACCGGTATaGCAGCTCCACTTCCATGTGCTGCCTTGCTTGGCGAATGTCATG | + |
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Preference number: 5 (lower is better) Translates to: KRDGEPNHPVGNIPV*QLHFHVLPCLANVM Trigger: CATGACATTCGCCAAGCAAGGCAGCACATGGAAGTGGAGCTGCCATACCGGTATATTACCTACGGGATGGTTGGGTTCTCCATCACGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS-3UTR CAA 90 bp | ATAACTACAATTTGTAACAGCACAGAACTCCCCAAACATTTGGTGAACATTCTACCGCAGCAGTCCGCCTaGGCGGGGCTGTCCTCAGCG | + |
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Preference number: 5 (lower is better) Translates to: ITTICNSTELPKHLVNILPQQSA*AGLSSA Trigger: CGCTGAGGACAGCCCCGCCAAGGCGGACTGCTGCGG...TAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACAAATTGTAGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS TCA 90 bp | TATGGCAGCTCCACTTCCATGTGCTGCCTTGCTTGGCGAATGTCATaGCACGGAATACTGGAGAGTTTACAGGCTAGAGGAATGGTGATC | + |
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Preference number: 5 (lower is better) Translates to: YGSSTSMCCLAWRMS*HGILESLQARGMVI Trigger: GATCACCATTCCTCTAGCCTGTAAACTCTCCAGTATTCCGTGTCATGACATTCGCCAAGCAAGGCAGCACATGGAAGTGGAGCTGCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS GCA 90 bp | GATTCCAGATCCAGAAGGGGAAGAATAAGATGTAGAAGAGCTCGTTaGCCAGTTCCGTGCCTAAGCAGAACAGGTAGTAGAGCGGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: DSRSRRGRIRCRRAR*PVPCLSRTGSRAAS Trigger: ACTTGCCGCTCTACTACCTGTTCTGCTTAGGCACGGAACTGGGCAACGAGCTCTTCTACATCTTATTCTTCCCCTTCTGGATCTGGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS GCA 90 bp | GTAGGTAATATACCGGTATGGCAGCTCCACTTCCATGTGCTGCCTTaGTTGGCGAATGTCATGACACGGAATACTGGAGAGTTTACAGGC | + |
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Preference number: 5 (lower is better) Translates to: VGNIPVWQLHFHVLP*LANVMTRNTGEFTG Trigger: GCCTGTAAACTCTCCAGTATTCCGTGTCATGACATTCGCCAAGCAAGGCAGCACATGGAAGTGGAGCTGCCATACCGGTATATTACCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS-3UTR CAA 90 bp | CACACAAAAATTAATAGCATAACAGACCCAAAGTGGGGGACCCTGTCTATAGCTCTTCCATGTGCTGCCTaGCTTGGCGAATGTCATGAC | + |
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Preference number: 5 (lower is better) Translates to: HTKINSITDPKWGTLSIALPCAA*LGECHD Trigger: GTCATGACATTCGCCAAGCAAGGCAGCACATGGAAG...AGCTATAGACAGGGTCCCCCACTTTGGGTCTGTTATGCTATTAATTTTTGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS-3UTR CAA 90 bp | ATAACTACAATTTGTAACAGCACAGAACTCCCCAAACATTTGGTGAACATTCTACGCATATTTGTAAGTTaGGTTGAAGTTGTCAATCAG | + |
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Preference number: 5 (lower is better) Translates to: ITTICNSTELPKHLVNILRIFVS*VEVVNQ Trigger: CTGATTGACAACTTCAACCAAACTTACAAATATGCG...TAGAATGTTCACCAAATGTTTGGGGAGTTCTGTGCTGTTACAAATTGTAGTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS CAA 72 bp | ACTTTGACCAGCTCGCCCTCCTCGCCCGTCAACGAGTaGCGGCGCTGCGAGCCCGCGCGGCGGGGCCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: TLTSSPSSPVNE*RRCEPARRGPV Trigger: GACCGGGCCCCGCCGCGCGGGCTCGCAGCGCCGCAACTCGTTGACGGGCGAGGAGGGCGAGCTGGTCAAAGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS CAA 90 bp | AAGTTGCTCACTTTGACCAGCTCGCCCTCCTCGCCCGTCAACGAGTaGCGGCGCTGCGAGCCCGCGCGGCGGGGCCCGGTCGGGCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: KLLTLTSSPSSPVNE*RRCEPARRGPVGPG Trigger: GCCGGGCCCGACCGGGCCCCGCCGCGCGGGCTCGCAGCGCCGCAACTCGTTGACGGGCGAGGAGGGCGAGCTGGTCAAAGTGAGCAACTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS GCA 72 bp | CACAGACGCTGGAAGCTCGCCACCCGCTGCGGCTCCTaGAGACGGCTGGCCAGCAGAGCCAGCCGCTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: HRRWKLATRCGS*RRLASRASRCP Trigger: GGGGCAGCGGCTGGCTCTGCTGGCCAGCCGTCTGCAGGAGCCGCAGCGGGTGGCGAGCTTCCAGCGTCTGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS TCA 72 bp | CCTCGGTCTCTGCATCCTCGTCCGCCGCCGGGCTGCTaGGCGGCACCTCCACCCCACACAGACGCTGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PRSLHPRPPPGC*AAPPPHTDAGS Trigger: GCTTCCAGCGTCTGTGTGGGGTGGAGGTGCCGCTCAGCAGCCCGGCGGCGGACGAGGATGCAGAGACCGAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS CAA 72 bp | GGCGGCGAGGCCGGCCGTGGCCAGCGGATGATGTCCTaGGTGCACTGGCCCAGGTACATGACCAGCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: GGEAGRGQRMMS*VHWPRYMTSTQ Trigger: CTGGGTGCTGGTCATGTACCTGGGCCAGTGCACCAAGGACATCATCCGCTGGCCACGGCCGGCCTCGCCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS CCA 72 bp | GACCTCCAGCTTGATGACAGGCGGCGAGGCCGGCCGTaGCCAGCGGATGATGTCCTTGGTGCACTGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: DLQLDDRRRGRP*PADDVLGALAQ Trigger: CTGGGCCAGTGCACCAAGGACATCATCCGCTGGCCACGGCCGGCCTCGCCGCCTGTCATCAAGCTGGAGGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS CCA 72 bp | GCCGGCCGTGGCCAGCGGATGATGTCCTTGGTGCACTaGCCCAGGTACATGACCAGCACCCAGATGATCACC | + |
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Preference number: 6 (lower is better) Translates to: AGRGQRMMSLVH*PRYMTSTQMIT Trigger: GGTGATCATCTGGGTGCTGGTCATGTACCTGGGCCAGTGCACCAAGGACATCATCCGCTGGCCACGGCCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS CAA 90 bp | TTGATGACAGGCGGCGAGGCCGGCCGTGGCCAGCGGATGATGTCCTaGGTGCACTGGCCCAGGTACATGACCAGCACCCAGATGATCACC | + |
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Preference number: 6 (lower is better) Translates to: LMTGGEAGRGQRMMS*VHWPRYMTSTQMIT Trigger: GGTGATCATCTGGGTGCTGGTCATGTACCTGGGCCAGTGCACCAAGGACATCATCCGCTGGCCACGGCCGGCCTCGCCGCCTGTCATCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS TCA 72 bp | GGTGAGCAGGAACATGGCGATGGGGATGGCGGTGCCTaGCATGGCATGCGTGGAGGGCATGCTGTATTCCGA | + |
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Preference number: 6 (lower is better) Translates to: GEQEHGDGDGGA*HGMRGGHAVFR Trigger: TCGGAATACAGCATGCCCTCCACGCATGCCATGTCAGGCACCGCCATCCCCATCGCCATGTTCCTGCTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS CCA 72 bp | GCAGGAACATGGCGATGGGGATGGCGGTGCCTGACATaGCATGCGTGGAGGGCATGCTGTATTCCGAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: AGTWRWGWRCLT*HAWRACCIPSC Trigger: ACAACTCGGAATACAGCATGCCCTCCACGCATGCCATGTCAGGCACCGCCATCCCCATCGCCATGTTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS TCA 72 bp | AGCAGAACAGGTAGTAGAGCGGCAAGTTGCTCACTTTaGCCAGCTCGCCCTCCTCGCCCGTCAACGAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SRTGSRAASCSL*PARPPRPSTSC Trigger: GCAACTCGTTGACGGGCGAGGAGGGCGAGCTGGTCAAAGTGAGCAACTTGCCGCTCTACTACCTGTTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS CCA 72 bp | GGAGAACCCAACCATCCCGTAGGTAATATACCGGTATaGCAGCTCCACTTCCATGTGCTGCCTTGCTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: GEPNHPVGNIPV*QLHFHVLPCLA Trigger: CGCCAAGCAAGGCAGCACATGGAAGTGGAGCTGCCATACCGGTATATTACCTACGGGATGGTTGGGTTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS TCA 72 bp | CCGTGTCTCCTCGGGATGTGCTCCAGGTGTCAAGGGTaGAAGAGAAGATGCCCAAAATTAAGTGAAGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: PCLLGMCSRCQG*KRRCPKLSEAR Trigger: TCGGGCTTCACTTAATTTTGGGCATCTTCTCTTTCACCCTTGACACCTGGAGCACATCCCGAGGAGACACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS GCA 72 bp | ATACCGGTATGGCAGCTCCACTTCCATGTGCTGCCTTaGTTGGCGAATGTCATGACACGGAATACTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: IPVWQLHFHVLP*LANVMTRNTGE Trigger: CTCTCCAGTATTCCGTGTCATGACATTCGCCAAGCAAGGCAGCACATGGAAGTGGAGCTGCCATACCGGTAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS CAA 72 bp | CCGGTATGGCAGCTCCACTTCCATGTGCTGCCTTGCTaGGCGAATGTCATGACACGGAATACTGGAGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: PVWQLHFHVLPC*ANVMTRNTGEF Trigger: AAACTCTCCAGTATTCCGTGTCATGACATTCGCCAAGCAAGGCAGCACATGGAAGTGGAGCTGCCATACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS CAA 72 bp | TATACCGGTATGGCAGCTCCACTTCCATGTGCTGCCTaGCTTGGCGAATGTCATGACACGGAATACTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: YTGMAAPLPCAA*LGECHDTEYWR Trigger: TCTCCAGTATTCCGTGTCATGACATTCGCCAAGCAAGGCAGCACATGGAAGTGGAGCTGCCATACCGGTATA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS TCA 72 bp | TCCACTTCCATGTGCTGCCTTGCTTGGCGAATGTCATaGCACGGAATACTGGAGAGTTTACAGGCTAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: STSMCCLAWRMS*HGILESLQARG Trigger: TCCTCTAGCCTGTAAACTCTCCAGTATTCCGTGTCATGACATTCGCCAAGCAAGGCAGCACATGGAAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021450.6 |
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| CDS GCA 72 bp | AGAATAAGATGTAGAAGAGCTCGTTGCCCAGTTCCGTaGCTAAGCAGAACAGGTAGTAGAGCGGCAAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: RIRCRRARCPVP*LSRTGSRAASC Trigger: GCAACTTGCCGCTCTACTACCTGTTCTGCTTAGGCACGGAACTGGGCAACGAGCTCTTCTACATCTTATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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| CDS GCA 72 bp | TCCAGAAGGGGAAGAATAAGATGTAGAAGAGCTCGTTaGCCAGTTCCGTGCCTAAGCAGAACAGGTAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SRRGRIRCRRAR*PVPCLSRTGSR Trigger: TCTACTACCTGTTCTGCTTAGGCACGGAACTGGGCAACGAGCTCTTCTACATCTTATTCTTCCCCTTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021450.6 ENSMUST00000220285.2 |
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