Pregenerated sensors for SGO2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026039Ensembl transcript IDs: ENSMUST00000027202.9
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTaGACAGGCAGGGTGGTGTGTTCCTGTGTTTTAGCAGTAAAGATG | + |
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Preference number: 1 (lower is better) Translates to: SPQSKCSVNKASNLH*TGRVVCSCVLAVKM Trigger: CATCTTTACTGCTAAAACACAGGAACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| 3UTR TCA 72 bp | TCAGAGGGATTCCAGGAGGTCAGTATTCCTGGAGCATaGACAGATGTCAGAAAGGCAACCCTCCCCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: SEGFQEVSIPGA*TDVRKATLPTK Trigger: CTTTGTGGGGAGGGTTGCCTTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGAATCCCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| 3UTR TCA 72 bp | CACAAAAACCGCTCAGTGGGCAAAAAGCAAAGCAGGTaGCTTGAGTTCCACCCTCTAGCAGGTCCTCATGAG | + |
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Preference number: 3 (lower is better) Translates to: HKNRSVGKKQSR*LEFHPLAGPHE Trigger: CTCATGAGGACCTGCTAGAGGGTGGAACTCAAGTCACCTGCTTTGCTTTTTGCCCACTGAGCGGTTTTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| 3UTR-3UTR CAA 90 bp | AATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGGTGGTGTGTTTGTTTCATGTTCTTCTaGTGCTTCTGTTCTGACCCG | + |
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Preference number: 3 (lower is better) Translates to: NVLLTRPPTSTAQAGWCVCFMFF*CFCSDP Trigger: CGGGTCAGAACAGAAGCACAAGAAGAACATGAAACA...AACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| 3UTR GCA 72 bp | AGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTaGACAGGCAGGGTGGTGTGTTCCTGTGTTTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: SKCSVNKASNLH*TGRVVCSCVLA Trigger: TGCTAAAACACAGGAACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| 3UTR GCA 72 bp | TGTTTCATGTTCTTCTTGTGCTTCTGTTCTGACCCGTaGTTTGAGAACTCGGGAAAACCAGGATCCATGTCC | + |
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Preference number: 3 (lower is better) Translates to: CFMFFLCFCSDP*FENSGKPGSMS Trigger: GGACATGGATCCTGGTTTTCCCGAGTTCTCAAAGCACGGGTCAGAACAGAAGCACAAGAAGAACATGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| 3UTR TCA 72 bp | CAAAACCAAACACTTCACGTACAAAACTCAAACAACTaGATCCGTCTTTGTTTCATGTTCTTCTTGTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: QNQTLHVQNSNN*IRLCFMFFLCF Trigger: GAAGCACAAGAAGAACATGAAACAAAGACGGATTCAGTTGTTTGAGTTTTGTACGTGAAGTGTTTGGTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | CAAGGCCTCCAACCTCCACTGCACAGGCAGGGTGGTGTGTTCCTGTGTTTTAGCTCTGAGGCTGGGAGATaGAGCAGTTTTCATCTCACT | + |
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Preference number: 4 (lower is better) Translates to: QGLQPPLHRQGGVFLCFSSEAGR*SSFHLT Trigger: AGTGAGATGAAAACTGCTCCATCTCCCAGCCTCAGA...GCTAAAACACAGGAACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR TCA 90 bp | TTCTTGTGCTTCTGTTCTGACCCGTGCTTTGAGAACTCGGGAAAACCAGGATCCGCAGTTTGGCTCTTCTaGATCCCCTCTGCCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: FLCFCSDPCFENSGKPGSAVWLF*IPSAIQ Trigger: CTGGATGGCAGAGGGGATTCAGAAGAGCCAAACTGC...GGATCCTGGTTTTCCCGAGTTCTCAAAGCACGGGTCAGAACAGAAGCACAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | TCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAAGGCAACCCTCCTCCTTCTCAGTCTGTTaGGAGTCAACAGCCTTAGCG | + |
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Preference number: 4 (lower is better) Translates to: SRRSVFLEHEQMSERQPSSFSVC*ESTALA Trigger: CGCTAAGGCTGTTGACTCCCAACAGACTGAGAAGGA...GGAGGGTTGCCTTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | CCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGTTCTGTGTCCTGTGGTaGGGATTACGTGTGCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PPHKVNVLLTRPPTSTAQFCVLW*GLRVPV Trigger: GACAGGCACACGTAATCCCCACCACAGGACACAGAA...CTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR TCA 90 bp | CAAGGCCTCCAACCTCCACTGCACAGGCAGGGTGGTGTGTTCCTGTGTTTTAGCTTCCGTTGTCTCTTGTaGAAAGAAGAGGTGATTCAA | + |
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Preference number: 4 (lower is better) Translates to: QGLQPPLHRQGGVFLCFSFRCLL*KEEVIQ Trigger: TTGAATCACCTCTTCTTTTCACAAGAGACAACGGAA...GCTAAAACACAGGAACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR TCA 90 bp | CAGAAAGGCAACCCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCGAAAGCATCTCCCAGTaGCCTCCCAGCGCTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: QKGNPPHKVNVLLTRPPTESISQ*PPSALF Trigger: AAACAAAGCGCTGGGAGGTCACTGGGAGATGCTTTC...GGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGGGTTGCCTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | GTCAGAGGGATTCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAAGACTTCTGTGTCCTGTaGTGGGGATTACGTGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VRGIPGGQYSWSMNRCQKDFCVL*WGLRVP Trigger: AGGCACACGTAATCCCCACCACAGGACACAGAAGTC...TTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGAATCCCTCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | CTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGGTGGTGTGTTCCTGTGTTGTTACACTTTGTCTaGCATTTATCATCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: LLTRPPTSTAQAGWCVPVLLHFV*HLSSAP Trigger: TGGTGCTGATGATAAATGGCAGACAAAGTGTAACAA...CACAGGAACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | CAGAAAGGCAACCCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCCCTGTTCTTAGCTCCTaGCAAACTGCTCCCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: QKGNPPHKVNVLLTRPPTPVLSS*QTAPCF Trigger: AAAGCAGGGAGCAGTTTGGCAGGAGCTAAGAACAGG...GGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGGGTTGCCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | CCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGATTGGGTGTGAAGACTaGCCTTCTGACTCATTCTCG | + |
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Preference number: 4 (lower is better) Translates to: PQSKCSVNKASNLHCTGRIGCED*PSDSFS Trigger: CGAGAATGAGTCAGAAGGGCAGTCTTCACACCCAAT...CCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | TTCTTGTGCTTCTGTTCTGACCCGTGCTTTGAGAACTCGGGAAAACCAGGATCCTTGCGTCAGGCTCACTaGAAGACTCAGAAGGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: FLCFCSDPCFENSGKPGSLRQAH*KTQKVS Trigger: ACTTACCTTCTGAGTCTTCCAGTGAGCCTGACGCAA...GGATCCTGGTTTTCCCGAGTTCTCAAAGCACGGGTCAGAACAGAAGCACAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | TTTGTTTCATGTTCTTCTTGTGCTTCTGTTCTGACCCGTGCTTTGAGAACTCGGCGCCTCTTTCTGCTCTaGCTGCATCAGCCTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FVSCSSCASVLTRALRTRRLFLL*LHQPLP Trigger: AGGAAGAGGCTGATGCAGCCAGAGCAGAAAGAGGCG...CCGAGTTCTCAAAGCACGGGTCAGAACAGAAGCACAAGAAGAACATGAAACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR TCA 90 bp | AATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGGTGGTGTGTTTTGTTTCTTGGTAGCTaGCAGGAGAAAAGAACCTTG | + |
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Preference number: 4 (lower is better) Translates to: NVLLTRPPTSTAQAGWCVLFLGS*QEKRTL Trigger: CAAGGTTCTTTTCTCCTGTCAGCTACCAAGAAACAA...AACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR TCA 90 bp | CCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGACCCACATGTCTTCTaGTTATCTTCTTTAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: PPHKVNVLLTRPPTSTAQDPHVF*LSSLGG Trigger: CCCTCCTAAAGAAGATAATCAGAAGACATGTGGGTC...CTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | GTCAGAGGGATTCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAATGCGCAGGCTTGCACTaGTTACTGTTCCTTTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: VRGIPGGQYSWSMNRCQKCAGLH*LLFLCF Trigger: GAAACAAAGGAACAGTAAGCAGTGCAAGCCTGCGCA...TTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGAATCCCTCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | GTCAGAGGGATTCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAACCAGCGCTTTGTTTCTaGATCTTTGGCAGGTTAGTC | + |
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Preference number: 4 (lower is better) Translates to: VRGIPGGQYSWSMNRCQKPALCF*IFGRLV Trigger: GACTAACCTGCCAAAGATGCAGAAACAAAGCGCTGG...TTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGAATCCCTCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | CCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGATGGCTGCTCAGTACTaGAAATGCAGTTTGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PPHKVNVLLTRPPTSTAQMAAQY*KCSLAL Trigger: AAGAGCCAAACTGCATTTCCAGTACTGAGCAGCCAT...CTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | TCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAAGGCAACCCTCCAGATCCAGAACATTCTaGGTCTTACAGTCACGTAAG | + |
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Preference number: 4 (lower is better) Translates to: SRRSVFLEHEQMSERQPSRSRTF*VLQSRK Trigger: CTTACGTGACTGTAAGACCCAGAATGTTCTGGATCT...GGAGGGTTGCCTTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | CAGAAAGGCAACCCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCGGGATTTTGCTAATCTaGGACTCATTCCGATCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QKGNPPHKVNVLLTRPPTGILLI*DSFRSG Trigger: CCCTGATCGGAATGAGTCCCAGATTAGCAAAATCCC...GGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGGGTTGCCTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | AATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGGTGGTGTGTTAATCTGGCTTCCTCTTaGCAATTTTCTCCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: NVLLTRPPTSTAQAGWCVNLASS*QFSPSP Trigger: TGGAGAAGGAGAAAATTGCCAAGAGGAAGCCAGATT...AACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR TCA 90 bp | CCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGGCTCCCTGCTTTACATaGTCCCTTTCTCTTTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: PQSKCSVNKASNLHCTGRAPCFT*SLSLCF Trigger: AAAACAAAGAGAAAGGGATCATGTAAAGCAGGGAGC...CCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | CCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGTTGTCTTTGCAATTCTaGCCTTCACTCGTCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PPHKVNVLLTRPPTSTAQLSLQF*PSLVSE Trigger: TTCAGAGACGAGTGAAGGGCAGAATTGCAAAGACAA...CTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | CCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGCACTCGGCATTTCTTTaGGTGTTATTGCTGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: PPHKVNVLLTRPPTSTAQHSAFL*VLLLVS Trigger: TGAAACCAGCAATAACACGCAAAGAAATGCCGAGTG...CTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | TTCTTGTGCTTCTGTTCTGACCCGTGCTTTGAGAACTCGGGAAAACCAGGATCCAGGAGAAAAGAACCTTaGTGGAACTCAGAAAGACTG | + |
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Preference number: 4 (lower is better) Translates to: FLCFCSDPCFENSGKPGSRRKEP*WNSERL Trigger: CAGTCTTTCTGAGTTCCACCAAGGTTCTTTTCTCCT...GGATCCTGGTTTTCCCGAGTTCTCAAAGCACGGGTCAGAACAGAAGCACAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | TTCTTGTGCTTCTGTTCTGACCCGTGCTTTGAGAACTCGGGAAAACCAGGATCCCTAGGTTTCCACTGGTaGTTTCTTTATTTGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: FLCFCSDPCFENSGKPGSLGFHW*FLYLLG Trigger: CCCAAGCAAATAAAGAAACCACCAGTGGAAACCTAG...GGATCCTGGTTTTCCCGAGTTCTCAAAGCACGGGTCAGAACAGAAGCACAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | GTCAGAGGGATTCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAATTGTTTCTGCATCTTTaGCAGGTTAGTCTGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VRGIPGGQYSWSMNRCQKLFLHL*QVSLLS Trigger: GGAGAGCAGACTAACCTGCCAAAGATGCAGAAACAA...TTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGAATCCCTCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | GTCAGAGGGATTCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAATATCTGAAACAGAACTaGTATCCACCAAGACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VRGIPGGQYSWSMNRCQKYLKQN*YPPRPG Trigger: CCCTGGTCTTGGTGGATACCAGTTCTGTTTCAGATA...TTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGAATCCCTCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| 3UTR CAA 72 bp | TCATGTTCTTCTTGTGCTTCTGTTCTGACCCGTGCTTaGAGAACTCGGGAAAACCAGGATCCATGTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: SCSSCASVLTRA*RTRENQDPCPL Trigger: AAGTGGACATGGATCCTGGTTTTCCCGAGTTCTCAAAGCACGGGTCAGAACAGAAGCACAAGAAGAACATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR TCA 90 bp | CAGAAAGGCAACCCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCCTCAGCACCTACTTCTaGACCATCTTTACATTCTCT | + |
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Preference number: 4 (lower is better) Translates to: QKGNPPHKVNVLLTRPPTLSTYF*TIFTFS Trigger: AGAGAATGTAAAGATGGTTCAGAAGTAGGTGCTGAG...GGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGGGTTGCCTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | AATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGGTGGTGTGTTGGTGGTTTCTTTATTTaGTTGGGTATGAAAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: NVLLTRPPTSTAQAGWCVGGFFI*LGMKGK Trigger: TTTCCCTTTCATACCCAAGCAAATAAAGAAACCACC...AACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | CAGAAAGGCAACCCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCAGGAATTTGCTTGTaGAGATCCAGAACATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QKGNPPHKVNVLLTRPPTSGICL*RSRTFW Trigger: CCAGAATGTTCTGGATCTGCACAAGCAAATTCCTGA...GGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGGGTTGCCTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | CCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGAGAAAAGAACCTTGGTaGAACTCAGAAAGACTGCTT | + |
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Preference number: 4 (lower is better) Translates to: PQSKCSVNKASNLHCTGRRKEPW*NSERLL Trigger: AAGCAGTCTTTCTGAGTTCCACCAAGGTTCTTTTCT...CCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | TCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAAGGCAACCCTCCCTTTGTACAAAAATCTaGCTTCCTCTTGGCAATTTT | + |
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Preference number: 4 (lower is better) Translates to: SRRSVFLEHEQMSERQPSLCTKI*LPLGNF Trigger: AAAATTGCCAAGAGGAAGCCAGATTTTTGTACAAAG...GGAGGGTTGCCTTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR TCA 90 bp | TCCGTCTTTGTTTCATGTTCTTCTTGTGCTTCTGTTCTGACCCGTGCTTTGAGAGAACTCTTAGGACTTTaGTCTGAGTGGCTCTCATTA | + |
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Preference number: 4 (lower is better) Translates to: SVFVSCSSCASVLTRALRELLGL*SEWLSL Trigger: TAATGAGAGCCACTCAGATCAAAGTCCTAAGAGTTC...TCTCAAAGCACGGGTCAGAACAGAAGCACAAGAAGAACATGAAACAAAGACGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | CCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGCTTTTTATCAGAGCTTaGACCTTTCACTTTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PPHKVNVLLTRPPTSTAQLFIRA*TFHFSE Trigger: TTCAGAAAAGTGAAAGGTGCAAGCTCTGATAAAAAG...CTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | TTTGTTTCATGTTCTTCTTGTGCTTCTGTTCTGACCCGTGCTTTGAGAACTCGGGCTCAGTACTGGAAATaGAGTTTGGCTCTTCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: FVSCSSCASVLTRALRTRAQYWK*SLALLN Trigger: ATTCAGAAGAGCCAAACTGCATTTCCAGTACTGAGC...CCGAGTTCTCAAAGCACGGGTCAGAACAGAAGCACAAGAAGAACATGAAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR CCA 90 bp | GTCAGAGGGATTCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAATTTCTAGGTTTCCACTaGTGGTTTCTTTATTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: VRGIPGGQYSWSMNRCQKFLGFH*WFLYLL Trigger: AAGCAAATAAAGAAACCACCAGTGGAAACCTAGAAA...TTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGAATCCCTCTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR TCA 90 bp | TTTGTTTCATGTTCTTCTTGTGCTTCTGTTCTGACCCGTGCTTTGAGAACTCGGCATCTTGAAGAAATTTaGCTGAATGTCTGGAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: FVSCSSCASVLTRALRTRHLEEI*LNVWRK Trigger: CTTTCTCCAGACATTCAGTCAAATTTCTTCAAGATG...CCGAGTTCTCAAAGCACGGGTCAGAACAGAAGCACAAGAAGAACATGAAACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | TCCGTCTTTGTTTCATGTTCTTCTTGTGCTTCTGTTCTGACCCGTGCTTTGAGAGGAATGCTTTCAAATTaGACTGATGTAAGGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: SVFVSCSSCASVLTRALRGMLSN*TDVRMK Trigger: CTTCATCCTTACATCAGTGCAATTTGAAAGCATTCC...TCTCAAAGCACGGGTCAGAACAGAAGCACAAGAAGAACATGAAACAAAGACGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS-3UTR GCA 90 bp | TTTGTTTCATGTTCTTCTTGTGCTTCTGTTCTGACCCGTGCTTTGAGAACTCGGTTCTTTAGGAGGGAATaGTTTCAAATTGCACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FVSCSSCASVLTRALRTRFFRRE*FQIALM Trigger: CATCAGTGCAATTTGAAAGCATTCCCTCCTAAAGAA...CCGAGTTCTCAAAGCACGGGTCAGAACAGAAGCACAAGAAGAACATGAAACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR TCA 90 bp | TGTATTAGTCTGAAATTTAAATGTAGGGCTCACAAAAACCGCTCAGTGGGCAAAACAGTTTTCTGGAAGTaGAAGCTATCGGTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CISLKFKCRAHKNRSVGKTVFWK*KLSVFF Trigger: GAAGAACACCGATAGCTTTCACTTCCAGAAAACTGT...TTTGCCCACTGAGCGGTTTTTGTGAGCCCTACATTTAAATTTCAGACTAATACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR TCA 90 bp | TGTATTAGTCTGAAATTTAAATGTAGGGCTCACAAAAACCGCTCAGTGGGCAAACTTGAAGTTGGTTGGTaGTCTAAATCTGTCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: CISLKFKCRAHKNRSVGKLEVGW*SKSVTY Trigger: GTATGTGACAGATTTAGATCACCAACCAACTTCAAG...TTTGCCCACTGAGCGGTTTTTGTGAGCCCTACATTTAAATTTCAGACTAATACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR GCA 90 bp | TGTATTAGTCTGAAATTTAAATGTAGGGCTCACAAAAACCGCTCAGTGGGCAAAGGAACTCAGAAAGACTaGTTATTTCAATTGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CISLKFKCRAHKNRSVGKGTQKD*LFQLQL Trigger: TAACTGCAATTGAAATAAGCAGTCTTTCTGAGTTCC...TTTGCCCACTGAGCGGTTTTTGTGAGCCCTACATTTAAATTTCAGACTAATACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR GCA 90 bp | ACGTACAAAACTCAAACAACTGAATCCGTCTTTGTTTCATGTTCTTCTTGTGCTTTGCGATTTACTTTTTaGCTAGGGATTTTGCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: TYKTQTTESVFVSCSSCALRFTF*LGILLI Trigger: GATTAGCAAAATCCCTAGGCAAAAAGTAAATCGCAA...AGCACAAGAAGAACATGAAACAAAGACGGATTCAGTTGTTTGAGTTTTGTACGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS GCA 90 bp | GCTGCTCAGTACTGGAAATGCAGTTTGGCTCTTCTGAATCCCCTCTaGCATCCAGGACACCAGCGCCTCTTTCTGCTCTGGCTGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAQYWKCSLALLNPL*HPGHQRLFLLWLHQ Trigger: CTGATGCAGCCAGAGCAGAAAGAGGCGCTGGTGTCCTGGATGGCAGAGGGGATTCAGAAGAGCCAAACTGCATTTCCAGTACTGAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS GCA 90 bp | CCAGAGTCTAAGGGGACAGACTGTACCTGGGAAGAGTCTGTTAACTaGAAACCACACCTGTTCTTAGCTCCTGCCAAACTGCTCCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PESKGTDCTWEESVN*KPHLFLAPAKLLPA Trigger: AGCAGGGAGCAGTTTGGCAGGAGCTAAGAACAGGTGTGGTTTGCAGTTAACAGACTCTTCCCAGGTACAGTCTGTCCCCTTAGACTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS GCA 90 bp | CTCACAGAGAAAGCATCTCCCAGTGACCTCCCAGCGCTTTGTTTCTaGATCTTTGGCAGGTTAGTCTGCTCTCCAGGACCAGAATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTEKASPSDLPALCF*IFGRLVCSPGPESA Trigger: AGCAGATTCTGGTCCTGGAGAGCAGACTAACCTGCCAAAGATGCAGAAACAAAGCGCTGGGAGGTCACTGGGAGATGCTTTCTCTGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS CCA 90 bp | GGCAGGTTAGTCTGCTCTCCAGGACCAGAATCTGCTTCGTTTGGATaGTGTCTTAAGCCAGAGTCTAAGGGGACAGACTGTACCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRLVCSPGPESASFG*CLKPESKGTDCTWE Trigger: TTCCCAGGTACAGTCTGTCCCCTTAGACTCTGGCTTAAGACACCATCCAAACGAAGCAGATTCTGGTCCTGGAGAGCAGACTAACCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | CAAGGCCTCCAACCTCCACTGCACAGGCAGGGTGGTGTGTTCCTGTGTTTTAGCACAGAATGTCTGGAGTaGAAGACACACACTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGLQPPLHRQGGVFLCFSTECLE*KTHTSS Trigger: GGAAGAAGTGTGTGTCTTCAACTCCAGACATTCTGT...GCTAAAACACAGGAACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAAGGCAACCCTCCCTCCTTCTCAGTCTGTaGGGAGTCAACAGCCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRRSVFLEHEQMSERQPSLLLSL*GVNSLS Trigger: GCTAAGGCTGTTGACTCCCAACAGACTGAGAAGGAG...GGAGGGTTGCCTTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS TCA 90 bp | CCCGTGGGTTTCAGGAGAACAACCGAGAGGGAGCTTTCTCTTCTTTaGTTTGGGTGTCATTTTACTAACTGCTTTGGCTGGGCGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVGFRRTTERELSLL*FGCHFTNCFGWAAS Trigger: GGAAGCCGCCCAGCCAAAGCAGTTAGTAAAATGACACCCAAATCAAAGAAGAGAAAGCTCCCTCTCGGTTGTTCTCCTGAAACCCACGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | AATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGGTGGTGTGTTTCGGGGTTAGCAGGGTaGGTATCTGAAACAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: NVLLTRPPTSTAQAGWCVSGLAG*VSETEL Trigger: CAGTTCTGTTTCAGATACCAACCCTGCTAACCCCGA...AACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS GCA 90 bp | TTGAGAGGGACGCACTGTCTTTTCCTTCTCATTGGGTGTGAAGACTaGCCTTCTGACTCATTCTCGGGGTTAGCAGGGTTGGTATCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LRGTHCLFLLIGCED*PSDSFSGLAGLVSE Trigger: TTCAGATACCAACCCTGCTAACCCCGAGAATGAGTCAGAAGGGCAGTCTTCACACCCAATGAGAAGGAAAAGACAGTGCGTCCCTCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAAGGCAACCCTCCATTTTACTAACTGCTTaGGCTGGGCGGCTTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRRSVFLEHEQMSERQPSILLTA*AGRLPS Trigger: AGAAGGAAGCCGCCCAGCCAAAGCAGTTAGTAAAAT...GGAGGGTTGCCTTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGAGGGATTCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAATTAGCGAGGTCAGTGTaGGGTGTTATCTCCACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VRGIPGGQYSWSMNRCQKLARSV*GVISTV Trigger: GACGGTGGAGATAACACCCAACACTGACCTCGCTAA...TTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGAATCCCTCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | CCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGCGCGCTAATGCTCTGTaGTTGTGCTTTAGAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: PQSKCSVNKASNLHCTGRRANAL*LCFREI Trigger: GATCTCTCTAAAGCACAACAACAGAGCATTAGCGCG...CCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | CAAGGCCTCCAACCTCCACTGCACAGGCAGGGTGGTGTGTTCCTGTGTTTTAGCTTCTGTTGTTACACTTaGTCTGCCATTTATCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: QGLQPPLHRQGGVFLCFSFCCYT*SAIYHQ Trigger: CTGATGATAAATGGCAGACAAAGTGTAACAACAGAA...GCTAAAACACAGGAACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | CCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGTACTGGAAATGCAGTTaGGCTCTTCTGAATCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PQSKCSVNKASNLHCTGRYWKCS*ALLNPL Trigger: GAGGGGATTCAGAAGAGCCAAACTGCATTTCCAGTA...CCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | CTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGGTGGTGTGTTCCTGTGGGTTTCTTTATTTGCTaGGGTATGAAAGGGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLTRPPTSTAQAGWCVPVGFFIC*GMKGKV Trigger: AACTTTCCCTTTCATACCCAAGCAAATAAAGAAACC...CACAGGAACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS GCA 90 bp | TTTTCTGGAAGTGAAAGCTATCGGTGTTCTTCTGCACTAGCTCCATaGGCTTTGCGTCAGGCTCACTGGAAGACTCAGAAGGTAAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: FSGSESYRCSSALAP*ALRQAHWKTQKVSQ Trigger: TTGACTTACCTTCTGAGTCTTCCAGTGAGCCTGACGCAAAGCGCATGGAGCTAGTGCAGAAGAACACCGATAGCTTTCACTTCCAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS CCA 90 bp | TTTGGATGGTGTCTTAAGCCAGAGTCTAAGGGGACAGACTGTACCTaGGAAGAGTCTGTTAACTGCAAACCACACCTGTTCTTAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FGWCLKPESKGTDCT*EESVNCKPHLFLAP Trigger: AGGAGCTAAGAACAGGTGTGGTTTGCAGTTAACAGACTCTTCCCAGGTACAGTCTGTCCCCTTAGACTCTGGCTTAAGACACCATCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | AATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGGTGGTGTGTTAGGGTTTGTTTCCTCTaGCTCATCTGTCGTATATGT | + |
|
Preference number: 5 (lower is better) Translates to: NVLLTRPPTSTAQAGWCVRVCFL*LICRIC Trigger: ACATATACGACAGATGAGCAAGAGGAAACAAACCCT...AACACACCACCCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | CAGAAAGGCAACCCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCAGCGGCATCACCTACTaGAAAGATGCATGTACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QKGNPPHKVNVLLTRPPTSGITY*KDACTL Trigger: GAGAGTACATGCATCTTTCAAGTAGGTGATGCCGCT...GGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGGGTTGCCTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS GCA 90 bp | TGCCTGTCGTTATCTTCTCATGAGCGGCATCACCTACTTGAAAGATaGATGTACTCTCCAGGGAAGAACTTTCTTCCAGCATCAGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CLSLSSHERHHLLER*MYSPGKNFLPASGF Trigger: AAACCCTGATGCTGGAAGAAAGTTCTTCCCTGGAGAGTACATGCATCTTTCAAGTAGGTGATGCCGCTCATGAGAAGATAACGACAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAAGGCAACCCTCCTGGTGGTTTCTTTATTaGCTTGGGTATGAAAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRRSVFLEHEQMSERQPSWWFLY*LGYERE Trigger: TTCCCTTTCATACCCAAGCAAATAAAGAAACCACCA...GGAGGGTTGCCTTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | TTCTTGTGCTTCTGTTCTGACCCGTGCTTTGAGAACTCGGGAAAACCAGGATCCAGATCAGGAATTTGCTaGTGCAGATCCAGAACATTC | + |
|
Preference number: 5 (lower is better) Translates to: FLCFCSDPCFENSGKPGSRSGIC*CRSRTF Trigger: GAATGTTCTGGATCTGCACAAGCAAATTCCTGATCT...GGATCCTGGTTTTCCCGAGTTCTCAAAGCACGGGTCAGAACAGAAGCACAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGAGGGATTCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAAAAATCTGGCTTCCTCTaGGCAATTTTCTCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRGIPGGQYSWSMNRCQKKSGFL*AIFSFS Trigger: GGAGAAGGAGAAAATTGCCAAGAGGAAGCCAGATTT...TTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGAATCCCTCTGAC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGAGGGATTCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAAGCTAATGCTCTGTTGTaGTGCTTTAGAGAGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VRGIPGGQYSWSMNRCQKANALL*CFREIL Trigger: CAAGATCTCTCTAAAGCACAACAACAGAGCATTAGC...TTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGAATCCCTCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | CAGAAAGGCAACCCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCCTGTTCCTTTGTTTCTaGGTAGCTGACAGGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QKGNPPHKVNVLLTRPPTLFLCF*VADRRK Trigger: TTTTCTCCTGTCAGCTACCAAGAAACAAAGGAACAG...GGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGGGTTGCCTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGAGGGATTCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAATTTTCAAGTCCAACATaGTCTGAGTCTCATGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VRGIPGGQYSWSMNRCQKFSSPT*SESHGH Trigger: GTGACCATGAGACTCAGACAATGTTGGACTTGAAAA...TTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGAATCCCTCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | CCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGGCAGGGACTTTGCACTATCTTaGTTACAAAAAGCAGGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: PQSKCSVNKASNLHCTGRDFALS*LQKAGV Trigger: TACGCCTGCTTTTTGTAACAAAGATAGTGCAAAGTC...CCTGCCTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGAGGGATTCCAGGAGGTCAGTATTCCTGGAGCATGAACAGATGTCAGAAACATTCAAATTTGTCTTaGCAATTCTGCCCTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: VRGIPGGQYSWSMNRCQKHSNLS*QFCPSL Trigger: GAGTGAAGGGCAGAATTGCAAAGACAAATTTGAATG...TTTCTGACATCTGTTCATGCTCCAGGAATACTGACCTCCTGGAATCCCTCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCCCACAAAGTAAATGTTCTGTTAACAAGGCCTCCAACCTCCACTGCACAGCAGTGTGCAAGGATCTaGAATTGGATCATAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPHKVNVLLTRPPTSTAQQCARI*NWIIIF Trigger: GAAAATTATGATCCAATTCAAGATCCTTGCACACTG...CTGTGCAGTGGAGGTTGGAGGCCTTGTTAACAGAACATTTACTTTGTGGGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS CCA 90 bp | ACTTCTGTCTTGCGATTTACTTTTTGCCTAGGGATTTTGCTAATCTaGGACTCATTCCGATCAGGGTATAGATCAGGAATTTGCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSVLRFTFCLGILLI*DSFRSGYRSGICLC Trigger: GCACAAGCAAATTCCTGATCTATACCCTGATCGGAATGAGTCCCAGATTAGCAAAATCCCTAGGCAAAAAGTAAATCGCAAGACAGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | TCCGTCTTTGTTTCATGTTCTTCTTGTGCTTCTGTTCTGACCCGTGCTTTGAGAATCTTGACAAGCAGGTaGCATATTAGGGTCATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVFVSCSSCASVLTRALRILTSR*HIRVMF Trigger: AAACATGACCCTAATATGCAACCTGCTTGTCAAGAT...TCTCAAAGCACGGGTCAGAACAGAAGCACAAGAAGAACATGAAACAAAGACGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS TCA 90 bp | GGAGATGGAGCAGTTTTCATCTCACTCAGAGAACTCTTAGGACTTTaGTCTGAGTGGCTCTCATTAGGAAGTATATCAACACTTGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GDGAVFISLRELLGL*SEWLSLGSISTLEV Trigger: TACTTCAAGTGTTGATATACTTCCTAATGAGAGCCACTCAGATCAAAGTCCTAAGAGTTCTCTGAGTGAGATGAAAACTGCTCCATCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | ACGTACAAAACTCAAACAACTGAATCCGTCTTTGTTTCATGTTCTTCTTGTGCTCAGGAGAAAAGAACCTaGGTGGAACTCAGAAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: TYKTQTTESVFVSCSSCAQEKRT*VELRKT Trigger: AGTCTTTCTGAGTTCCACCAAGGTTCTTTTCTCCTG...AGCACAAGAAGAACATGAAACAAAGACGGATTCAGTTGTTTGAGTTTTGTACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS TCA 90 bp | GTAGGGTTTTCTGACACAGATCAAATTTACCATCTTGAAGAAATTTaGCTGAATGTCTGGAGAAAGGGTTTGTTTCCTCTTGCTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGFSDTDQIYHLEEI*LNVWRKGLFPLAHL Trigger: CAGATGAGCAAGAGGAAACAAACCCTTTCTCCAGACATTCAGTCAAATTTCTTCAAGATGGTAAATTTGATCTGTGTCAGAAAACCCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS CCA 90 bp | CAGATAAAGGTTTCAACACCTTTGTACAAAAATCTGGCTTCCTCTTaGCAATTTTCTCCTTCTCCAAATAGTTCTCCTTCTCAGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QIKVSTPLYKNLASS*QFSPSPNSSPSQSV Trigger: AACAGACTGAGAAGGAGAACTATTTGGAGAAGGAGAAAATTGCCAAGAGGAAGCCAGATTTTTGTACAAAGGTGTTGAAACCTTTATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | ACGTACAAAACTCAAACAACTGAATCCGTCTTTGTTTCATGTTCTTCTTGTGCTGAAACTGCTACAATCTaGCCTATGTCAGTAGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TYKTQTTESVFVSCSSCAETATI*PMSVAV Trigger: AACTGCTACTGACATAGGCAAGATTGTAGCAGTTTC...AGCACAAGAAGAACATGAAACAAAGACGGATTCAGTTGTTTGAGTTTTGTACGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | TGTATTAGTCTGAAATTTAAATGTAGGGCTCACAAAAACCGCTCAGTGGGCAAAGTTTCTTACCTGCTTTaGAATCATCTTGACAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CISLKFKCRAHKNRSVGKVSYLL*NHLDKQ Trigger: CTGCTTGTCAAGATGATTCAAAAGCAGGTAAGAAAC...TTTGCCCACTGAGCGGTTTTTGTGAGCCCTACATTTAAATTTCAGACTAATACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS-3UTR CAA 90 bp | TGTATTAGTCTGAAATTTAAATGTAGGGCTCACAAAAACCGCTCAGTGGGCAAAGGAGCTTTCTCTTCTTaGATTTGGGTGTCATTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: CISLKFKCRAHKNRSVGKGAFSS*IWVSFY Trigger: GTAAAATGACACCCAAATCAAAGAAGAGAAAGCTCC...TTTGCCCACTGAGCGGTTTTTGTGAGCCCTACATTTAAATTTCAGACTAATACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS GCA 72 bp | ATCCCCTCTGCCATCCAGGACACCAGCGCCTCTTTCTaGTCTGGCTGCATCAGCCTCTTCCTCAGCACCTAC | + |
|
Preference number: 6 (lower is better) Translates to: IPSAIQDTSASF*SGCISLFLSTY Trigger: GTAGGTGCTGAGGAAGAGGCTGATGCAGCCAGAGCAGAAAGAGGCGCTGGTGTCCTGGATGGCAGAGGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS GCA 72 bp | AAAGCATCTCCCAGTGACCTCCCAGCGCTTTGTTTCTaGATCTTTGGCAGGTTAGTCTGCTCTCCAGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: KASPSDLPALCF*IFGRLVCSPGP Trigger: TGGTCCTGGAGAGCAGACTAACCTGCCAAAGATGCAGAAACAAAGCGCTGGGAGGTCACTGGGAGATGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
||
| CDS CAA 90 bp | GGGTGTGAAGACTGCCCTTCTGACTCATTCTCGGGGTTAGCAGGGTaGGTATCTGAAACAGAACTGGTATCCACCAAGACCAGGGACGTT | + |
|
Preference number: 6 (lower is better) Translates to: GCEDCPSDSFSGLAG*VSETELVSTKTRDV Trigger: AACGTCCCTGGTCTTGGTGGATACCAGTTCTGTTTCAGATACCAACCCTGCTAACCCCGAGAATGAGTCAGAAGGGCAGTCTTCACACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS GCA 72 bp | AGTGAAAGCTATCGGTGTTCTTCTGCACTAGCTCCATaGGCTTTGCGTCAGGCTCACTGGAAGACTCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SESYRCSSALAP*ALRQAHWKTQK Trigger: CTTCTGAGTCTTCCAGTGAGCCTGACGCAAAGCGCATGGAGCTAGTGCAGAAGAACACCGATAGCTTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS GCA 72 bp | CCAGCGCTTTGTTTCTGCATCTTTGGCAGGTTAGTCTaGTCTCCAGGACCAGAATCTGCTTCGTTTGGATGG | + |
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Preference number: 6 (lower is better) Translates to: PALCFCIFGRLV*SPGPESASFGW Trigger: CCATCCAAACGAAGCAGATTCTGGTCCTGGAGAGCAGACTAACCTGCCAAAGATGCAGAAACAAAGCGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CCA 72 bp | GTCTGCTCTCCAGGACCAGAATCTGCTTCGTTTGGATaGTGTCTTAAGCCAGAGTCTAAGGGGACAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: VCSPGPESASFG*CLKPESKGTDC Trigger: ACAGTCTGTCCCCTTAGACTCTGGCTTAAGACACCATCCAAACGAAGCAGATTCTGGTCCTGGAGAGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | AGCTATCGGTGTTCTTCTGCACTAGCTCCATGCGCTTaGCGTCAGGCTCACTGGAAGACTCAGAAGGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: SYRCSSALAPCA*RQAHWKTQKVS Trigger: ACTTACCTTCTGAGTCTTCCAGTGAGCCTGACGCAAAGCGCATGGAGCTAGTGCAGAAGAACACCGATAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | GACTGCCCTTCTGACTCATTCTCGGGGTTAGCAGGGTaGGTATCTGAAACAGAACTGGTATCCACCAAGACC | + |
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Preference number: 6 (lower is better) Translates to: DCPSDSFSGLAG*VSETELVSTKT Trigger: GGTCTTGGTGGATACCAGTTCTGTTTCAGATACCAACCCTGCTAACCCCGAGAATGAGTCAGAAGGGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS TCA 72 bp | TTCTTTTCCCAGACTCACAGAGAAAGCATCTCCCAGTaGCCTCCCAGCGCTTTGTTTCTGCATCTTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: FFSQTHRESISQ*PPSALFLHLWQ Trigger: CTGCCAAAGATGCAGAAACAAAGCGCTGGGAGGTCACTGGGAGATGCTTTCTCTGTGAGTCTGGGAAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 90 bp | GGAAGTGAAAGCTATCGGTGTTCTTCTGCACTAGCTCCATGCGCTTaGCGTCAGGCTCACTGGAAGACTCAGAAGGTAAGTCAAGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: GSESYRCSSALAPCA*RQAHWKTQKVSQEN Trigger: GTTTTCTTGACTTACCTTCTGAGTCTTCCAGTGAGCCTGACGCAAAGCGCATGGAGCTAGTGCAGAAGAACACCGATAGCTTTCACTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CCA 72 bp | TGTCTTAAGCCAGAGTCTAAGGGGACAGACTGTACCTaGGAAGAGTCTGTTAACTGCAAACCACACCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: CLKPESKGTDCT*EESVNCKPHLF Trigger: GAACAGGTGTGGTTTGCAGTTAACAGACTCTTCCCAGGTACAGTCTGTCCCCTTAGACTCTGGCTTAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | TGCGCAGGCTTGCACTGCTTACTGTTCCTTTGTTTCTaGGTAGCTGACAGGAGAAAAGAACCTTGGTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: CAGLHCLLFLCF*VADRRKEPWWN Trigger: GTTCCACCAAGGTTCTTTTCTCCTGTCAGCTACCAAGAAACAAAGGAACAGTAAGCAGTGCAAGCCTGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | TTTCTCCTTCTCCAAATAGTTCTCCTTCTCAGTCTGTaGGGAGTCAACAGCCTTAGCGAGGTCAGTGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: FLLLQIVLLLSL*GVNSLSEVSVG Trigger: CCCAACACTGACCTCGCTAAGGCTGTTGACTCCCAACAGACTGAGAAGGAGAACTATTTGGAGAAGGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 90 bp | CTTGGCAATTTTCTCCTTCTCCAAATAGTTCTCCTTCTCAGTCTGTaGGGAGTCAACAGCCTTAGCGAGGTCAGTGTTGGGTGTTATCTC | + |
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Preference number: 6 (lower is better) Translates to: LGNFLLLQIVLLLSL*GVNSLSEVSVGCYL Trigger: GAGATAACACCCAACACTGACCTCGCTAAGGCTGTTGACTCCCAACAGACTGAGAAGGAGAACTATTTGGAGAAGGAGAAAATTGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS GCA 72 bp | AGAACTCTTGCATATGGAAGATGCGCAGGCTTGCACTaGTTACTGTTCCTTTGTTTCTTGGTAGCTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: RTLAYGRCAGLH*LLFLCFLVADR Trigger: CCTGTCAGCTACCAAGAAACAAAGGAACAGTAAGCAGTGCAAGCCTGCGCATCTTCCATATGCAAGAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CCA 72 bp | CTGGAGGGTTCTTTTCTTTTGCGTGTTTACCTGAGATaGCTGCTCAGTACTGGAAATGCAGTTTGGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LEGSFLLRVYLR*LLSTGNAVWLF Trigger: GAAGAGCCAAACTGCATTTCCAGTACTGAGCAGCCATCTCAGGTAAACACGCAAAAGAAAAGAACCCTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | GCCTGTCGTTATCTTCTCATGAGCGGCATCACCTACTaGAAAGATGCATGTACTCTCCAGGGAAGAACTTTC | + |
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Preference number: 6 (lower is better) Translates to: ACRYLLMSGITY*KDACTLQGRTF Trigger: GAAAGTTCTTCCCTGGAGAGTACATGCATCTTTCAAGTAGGTGATGCCGCTCATGAGAAGATAACGACAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | CTCTTCTTTGATTTGGGTGTCATTTTACTAACTGCTTaGGCTGGGCGGCTTCCTTCTTTTCCCAGACTCACA | + |
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Preference number: 6 (lower is better) Translates to: LFFDLGVILLTA*AGRLPSFPRLT Trigger: TGTGAGTCTGGGAAAAGAAGGAAGCCGCCCAGCCAAAGCAGTTAGTAAAATGACACCCAAATCAAAGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS TCA 72 bp | CTTGCACTGCTTACTGTTCCTTTGTTTCTTGGTAGCTaGCAGGAGAAAAGAACCTTGGTGGAACTCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LALLTVPLFLGS*QEKRTLVELRK Trigger: CTTTCTGAGTTCCACCAAGGTTCTTTTCTCCTGTCAGCTACCAAGAAACAAAGGAACAGTAAGCAGTGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS GCA 72 bp | TCATTCCGATCAGGGTATAGATCAGGAATTTGCTTGTaGAGATCCAGAACATTCTGGGTCTTACAGTCACGT | + |
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Preference number: 6 (lower is better) Translates to: SFRSGYRSGICL*RSRTFWVLQSR Trigger: ACGTGACTGTAAGACCCAGAATGTTCTGGATCTGCACAAGCAAATTCCTGATCTATACCCTGATCGGAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS GCA 72 bp | TTATCTTCTCATGAGCGGCATCACCTACTTGAAAGATaGATGTACTCTCCAGGGAAGAACTTTCTTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSSHERHHLLER*MYSPGKNFLPA Trigger: TGCTGGAAGAAAGTTCTTCCCTGGAGAGTACATGCATCTTTCAAGTAGGTGATGCCGCTCATGAGAAGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CCA 72 bp | AGATCAGGAATTTGCTTGTGCAGATCCAGAACATTCTaGGTCTTACAGTCACGTAAGCTTCCGTTGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RSGICLCRSRTF*VLQSRKLPLSL Trigger: AAGAGACAACGGAAGCTTACGTGACTGTAAGACCCAGAATGTTCTGGATCTGCACAAGCAAATTCCTGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | GTTAACAGAACTCTTGCATATGGAAGATGCGCAGGCTaGCACTGCTTACTGTTCCTTTGTTTCTTGGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: VNRTLAYGRCAG*HCLLFLCFLVA Trigger: AGCTACCAAGAAACAAAGGAACAGTAAGCAGTGCAAGCCTGCGCATCTTCCATATGCAAGAGTTCTGTTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS GCA 72 bp | TTGACTGAATGTCTGGAGAAAGGGTTTGTTTCCTCTTaGTCATCTGTCGTATATGTTTGCCTCCTCTTCGTA | + |
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Preference number: 6 (lower is better) Translates to: LTECLEKGFVSS*SSVVYVCLLFV Trigger: TACGAAGAGGAGGCAAACATATACGACAGATGAGCAAGAGGAAACAAACCCTTTCTCCAGACATTCAGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS GCA 72 bp | TTTTCTGAAGTTAACAGAACTCTTGCATATGGAAGATaGGCAGGCTTGCACTGCTTACTGTTCCTTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FSEVNRTLAYGR*AGLHCLLFLCF Trigger: GAAACAAAGGAACAGTAAGCAGTGCAAGCCTGCGCATCTTCCATATGCAAGAGTTCTGTTAACTTCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | ACTTCTGTCTTGCGATTTACTTTTTGCCTAGGGATTTaGCTAATCTGGGACTCATTCCGATCAGGGTATAGA | + |
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Preference number: 6 (lower is better) Translates to: TSVLRFTFCLGI*LIWDSFRSGYR Trigger: TCTATACCCTGATCGGAATGAGTCCCAGATTAGCAAAATCCCTAGGCAAAAAGTAAATCGCAAGACAGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 90 bp | CCAGAAATTACTTCTGTCTTGCGATTTACTTTTTGCCTAGGGATTTaGCTAATCTGGGACTCATTCCGATCAGGGTATAGATCAGGAATT | + |
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Preference number: 6 (lower is better) Translates to: PEITSVLRFTFCLGI*LIWDSFRSGYRSGI Trigger: AATTCCTGATCTATACCCTGATCGGAATGAGTCCCAGATTAGCAAAATCCCTAGGCAAAAAGTAAATCGCAAGACAGAAGTAATTTCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS TCA 72 bp | GCAGTTTTCATCTCACTCAGAGAACTCTTAGGACTTTaGTCTGAGTGGCTCTCATTAGGAAGTATATCAACA | + |
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Preference number: 6 (lower is better) Translates to: AVFISLRELLGL*SEWLSLGSIST Trigger: TGTTGATATACTTCCTAATGAGAGCCACTCAGATCAAAGTCCTAAGAGTTCTCTGAGTGAGATGAAAACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CCA 72 bp | TTGCGATTTACTTTTTGCCTAGGGATTTTGCTAATCTaGGACTCATTCCGATCAGGGTATAGATCAGGAATT | + |
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Preference number: 6 (lower is better) Translates to: LRFTFCLGILLI*DSFRSGYRSGI Trigger: AATTCCTGATCTATACCCTGATCGGAATGAGTCCCAGATTAGCAAAATCCCTAGGCAAAAAGTAAATCGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | TTCTCTTTACTAAGGGCCCGCGCTAATGCTCTGTTGTaGTGCTTTAGAGAGATCTTGAAAATAGAAGAATTG | + |
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Preference number: 6 (lower is better) Translates to: FSLLRARANALL*CFREILKIEEL Trigger: CAATTCTTCTATTTTCAAGATCTCTCTAAAGCACAACAACAGAGCATTAGCGCGGGCCCTTAGTAAAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | GAGGTACTATCAGGTGAGGTCTTTGATATAGTTCTGTaGTTACACTTTGTCTGCCATTTATCATCAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: EVLSGEVFDIVL*LHFVCHLSSAP Trigger: TGGTGCTGATGATAAATGGCAGACAAAGTGTAACAACAGAACTATATCAAAGACCTCACCTGATAGTACCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS GCA 72 bp | TCTTTACTAAGGGCCCGCGCTAATGCTCTGTTGTTGTaGTTTAGAGAGATCTTGAAAATAGAAGAATTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SLLRARANALLL*FREILKIEELF Trigger: AAACAATTCTTCTATTTTCAAGATCTCTCTAAAGCACAACAACAGAGCATTAGCGCGGGCCCTTAGTAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS GCA 72 bp | CCCCAAGAGCATTTCAGACTTATAATCACACGACTTTaGACTATCTTTGTTACAAAAAGCAGGCGTATCAAA | + |
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Preference number: 6 (lower is better) Translates to: PQEHFRLIITRL*TIFVTKSRRIK Trigger: TTTGATACGCCTGCTTTTTGTAACAAAGATAGTGCAAAGTCGTGTGATTATAAGTCTGAAATGCTCTTGGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | ACCCCAAGAGCATTTCAGACTTATAATCACACGACTTaGCACTATCTTTGTTACAAAAAGCAGGCGTATCAA | + |
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Preference number: 6 (lower is better) Translates to: TPRAFQTYNHTT*HYLCYKKQAYQ Trigger: TTGATACGCCTGCTTTTTGTAACAAAGATAGTGCAAAGTCGTGTGATTATAAGTCTGAAATGCTCTTGGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS TCA 72 bp | TTATCTTCTTTAGGAGGGAATGCTTTCAAATTGCACTaGTGTAAGGATGAAGGTTGTCTTGATACTGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LSSLGGNAFKLH*CKDEGCLDTEE Trigger: CTCTTCAGTATCAAGACAACCTTCATCCTTACATCAGTGCAATTTGAAAGCATTCCCTCCTAAAGAAGATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | GACCATGTATCTCATTATTCCAATTTGATCCTGGACTaGAAGTTGGTTGGTGATCTAAATCTGTCACATACA | + |
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Preference number: 6 (lower is better) Translates to: DHVSHYSNLILD*KLVGDLNLSHT Trigger: TGTATGTGACAGATTTAGATCACCAACCAACTTCAAGTCCAGGATCAAATTGGAATAATGAGATACATGGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 90 bp | CAAATTCTTTTGAACTTTCTAGGTTTCCACTGGTGGTTTCTTTATTaGCTTGGGTATGAAAGGGAAAGTTGTCTTTTTCTAGGACGTGAA | + |
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Preference number: 6 (lower is better) Translates to: QILLNFLGFHWWFLY*LGYERESCLFLGRE Trigger: TTCACGTCCTAGAAAAAGACAACTTTCCCTTTCATACCCAAGCAAATAAAGAAACCACCAGTGGAAACCTAGAAAGTTCAAAAGAATTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 90 bp | GAATTCTCTTTCTCTTTACTAAGGGCCCGCGCTAATGCTCTGTTGTaGTGCTTTAGAGAGATCTTGAAAATAGAAGAATTGTTTAATATT | + |
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Preference number: 6 (lower is better) Translates to: EFSFSLLRARANALL*CFREILKIEELFNI Trigger: AATATTAAACAATTCTTCTATTTTCAAGATCTCTCTAAAGCACAACAACAGAGCATTAGCGCGGGCCCTTAGTAAAGAGAAAGAGAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CCA 72 bp | GTGATTCAAATTCTTTTGAACTTTCTAGGTTTCCACTaGTGGTTTCTTTATTTGCTTGGGTATGAAAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: VIQILLNFLGFH*WFLYLLGYERE Trigger: TTCCCTTTCATACCCAAGCAAATAAAGAAACCACCAGTGGAAACCTAGAAAGTTCAAAAGAATTTGAATCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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| CDS CAA 72 bp | TTGAACTTTCTAGGTTTCCACTGGTGGTTTCTTTATTaGCTTGGGTATGAAAGGGAAAGTTGTCTTTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: LNFLGFHWWFLY*LGYERESCLFL Trigger: TAGAAAAAGACAACTTTCCCTTTCATACCCAAGCAAATAAAGAAACCACCAGTGGAAACCTAGAAAGTTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027202.9 |
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