Pregenerated sensors for SGK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017868Ensembl transcript IDs: ENSMUST00000018012.14, ENSMUST00000117123.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCACCCCAGGCTGGAAGGGAGTAGGCCACTTGGGATATCTTATTTaGAGGTATCTTATTCCCAGCTCGGACTTCTGTTTCTGCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PTPGWKGVGHLGYLI*RYLIPSSDFCFCLL Trigger: CAGGAGGCAGAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATATCCCAAGTGGCCTACTCCCTTCCAGCCTGGGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR CCA 90 bp | TACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCCCACCAGACGGTTTCTaGGCAGCCCACCTCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: YQEALSQSAGHLHPPLSLPPDGF*AAHLCP Trigger: GGGACAGAGGTGGGCTGCCCAGAAACCGTCTGGTGG...GAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR CCA 90 bp | TACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCCCAGCAGGTACCGGCTaGGCTTGGTGGCTTTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: YQEALSQSAGHLHPPLSLPAGTG*AWWLSK Trigger: CTTGGAAAGCCACCAAGCCCAGCCGGTACCTGCTGG...GAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGATACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTCCACCAGACGGTTTCTaGGCAGCCCACCTCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: IQIPRGSLPECWSPTSSPPPDGF*AAHLCP Trigger: GGGACAGAGGTGGGCTGCCCAGAAACCGTCTGGTGG...AGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTATCTGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCAGATACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTGGATCACTATCCAATaGGGGAGGGGCTCAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: IQIPRGSLPECWSPTSSPWITIQ*GRGSGF Trigger: GAAGCCTGAGCCCCTCCCTCATTGGATAGTGATCCA...AGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTATCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR TCA 90 bp | GGTAGCTTGTGCCCAGGCTGCATTCCAGGAGAGGTGGAGATTTACGACACACTATGGATCACTATCCAATaGGGGAGGGGCTCAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GSLCPGCIPGEVEIYDTLWITIQ*GRGSGF Trigger: GAAGCCTGAGCCCCTCCCTCATTGGATAGTGATCCA...TAGTGTGTCGTAAATCTCCACCTCTCCTGGAATGCAGCCTGGGCACAAGCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR CAA 90 bp | CCCCACCCCAGGCTGGAAGGGAGTAGGCCACTTGGGATATCTTATTaGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTTCTGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PHPRLEGSRPLGISY*KVSYSQLGLLFLPP Trigger: AGGAGGCAGAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATATCCCAAGTGGCCTACTCCCTTCCAGCCTGGGGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCAGTGAGATGACTCAGCTTTGGCTGAAGACCGTAGCAATAGATGAGCCAAGAACTGCAGACGGCTaGATACTGGGGAGCCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: PSSEMTQLWLKTVAIDEPRTADG*ILGSLN Trigger: GTTCAGGCTCCCCAGTATCCAGCCGTCTGCAGTTCT...TGGCTCATCTATTGCTACGGTCTTCAGCCAAAGCTGAGTCATCTCACTGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR CAA 90 bp | TTCCCCTCTTCTCCGAGCCACTGTGTCTTACTTCTTTGGGACTCATaGTGTCTTAGTGCAGCAGAAGATAGTTCCAGCAGGTACCGGCTG | + |
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Preference number: 2 (lower is better) Translates to: FPSSPSHCVLLLWDS*CLSAAEDSSSRYRL Trigger: CAGCCGGTACCTGCTGGAACTATCTTCTGCTGCACTAAGACACAATGAGTCCCAAAGAAGTAAGACACAGTGGCTCGGAGAAGAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCAGCATTTGAACGGATACTGGGGAGCCTaGACTGTTCCTTCACATGAT | + |
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Preference number: 2 (lower is better) Translates to: SLPECWSPTSSPFSQHLNGYWGA*TVPSHD Trigger: ATCATGTGAAGGAACAGTTCAGGCTCCCCAGTATCC...GTTCAAATGCTGAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR GCA 90 bp | GGTAGCTTGTGCCCAGGCTGCATTCCAGGAGAGGTGGAGATTTACGACACACTATCGGACTTCTGTTTCTaGCTCCTGGTAGTCATAAGG | + |
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Preference number: 2 (lower is better) Translates to: GSLCPGCIPGEVEIYDTLSDFCF*LLVVIR Trigger: CCTTATGACTACCAGGAGGCAGAAACAGAAGTCCGA...TAGTGTGTCGTAAATCTCCACCTCTCCTGGAATGCAGCCTGGGCACAAGCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR GCA 90 bp | TACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCTTCCTCCTTTTCTCTTaGTTAGCACACAAAAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: YQEALSQSAGHLHPPLSLFLLFS*LAHKSG Trigger: GCCACTTTTGTGTGCTAAGCAAGAGAAAAGGAGGAA...GAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGAGAGGTGGAGAGAGATGACTCAGCTTTaGCTGAAGACCGTAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: LLLREVACAQAAFQERWREMTQL*LKTVAI Trigger: TATTGCTACGGTCTTCAGCCAAAGCTGAGTCATCTC...TCTCCACCTCTCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR TCA 90 bp | TACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCTTGGGATATCTTATTTaGAGGTATCTTATTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: YQEALSQSAGHLHPPLSLLGYLI*RYLIPS Trigger: GCTGGGAATAAGATACCTTCAAATAAGATATCCCAA...GAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR GCA 90 bp | TACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCGTTCTTTACTTTTCTTaGATATTTTGTCACTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: YQEALSQSAGHLHPPLSLVLYFS*IFCHCL Trigger: GAGGCAGTGACAAAATATGCAAGAAAAGTAAAGAAC...GAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR CCA 90 bp | TACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCTGTAATTTTATAGCATaGAGAGGTGATAAATCGGAG | + |
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Preference number: 2 (lower is better) Translates to: YQEALSQSAGHLHPPLSLCNFIA*RGDKSE Trigger: CTCCGATTTATCACCTCTCCATGCTATAAAATTACA...GAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR GCA 90 bp | GGTAGCTTGTGCCCAGGCTGCATTCCAGGAGAGGTGGAGATTTACGACACACTAGTTCTTTACTTTTCTTaGATATTTTGTCACTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: GSLCPGCIPGEVEIYDTLVLYFS*IFCHCL Trigger: GAGGCAGTGACAAAATATGCAAGAAAAGTAAAGAAC...TAGTGTGTCGTAAATCTCCACCTCTCCTGGAATGCAGCCTGGGCACAAGCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTTCTGCCTCCTGGTAGTCATGAGATGACTCAGCTTTaGCTGAAGACCGTAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: LKVSYSQLGLLFLPPGSHEMTQL*LKTVAI Trigger: TATTGCTACGGTCTTCAGCCAAAGCTGAGTCATCTC...ATGACTACCAGGAGGCAGAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR TCA 90 bp | ATATCTTATTTGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTTCTGCCTCCTGGATACTGGGGAGCCTaGACTGTTCCTTCACATGAT | + |
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Preference number: 2 (lower is better) Translates to: ISYLKVSYSQLGLLFLPPGYWGA*TVPSHD Trigger: ATCATGTGAAGGAACAGTTCAGGCTCCCCAGTATCC...AGGAGGCAGAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR TCA 72 bp | CCTCCTGGTAGTCATAAGGTAAGCCACCCCTTCCAGTaGGATGACTCAGCTTTGGCTGAAGACCGTAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: PPGSHKVSHPFQ*DDSALAEDRSN Trigger: ATTGCTACGGTCTTCAGCCAAAGCTGAGTCATCTCACTGGAAGGGGTGGCTTACCTTATGACTACCAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR TCA 72 bp | AGGTTCCTGTGTCCAGCTGATGGAGCCTTCAGTAAATaGTTGGATCACTATCCAATGAGGGAGGGGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: RFLCPADGAFSK*LDHYPMREGLR Trigger: CCTGAGCCCCTCCCTCATTGGATAGTGATCCAATCATTTACTGAAGGCTCCATCAGCTGGACACAGGAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR TCA 72 bp | GCTGGTCACCTACATCCTCCCCTTTCTCTCAGCATTTaGACCCTTTTACTACGAGAGGTAGCTTGTGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: AGHLHPPLSLSI*TLLLREVACAQ Trigger: CTGGGCACAAGCTACCTCTCGTAGTAAAAGGGTTCAAATGCTGAGAGAAAGGGGAGGATGTAGGTGACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCAGCATTTGAACGTTCCTCCTTTTCTCTaGCTTAGCACACAAAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: SLPECWSPTSSPFSQHLNVPPFL*LSTQKW Trigger: CCACTTTTGTGTGCTAAGCAAGAGAAAAGGAGGAAC...GTTCAAATGCTGAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR TCA 72 bp | GGCTGGAAGGGAGTAGGCCACTTGGGATATCTTATTTaGAGGTATCTTATTCCCAGCTCGGACTTCTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: GWKGVGHLGYLI*RYLIPSSDFCF Trigger: GAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATATCCCAAGTGGCCTACTCCCTTCCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCAGCATTTGAACCTTGGGATATCTTATTaGAAGGTATCTTATTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: SLPECWSPTSSPFSQHLNLGISY*KVSYSQ Trigger: CTGGGAATAAGATACCTTCAAATAAGATATCCCAAG...GTTCAAATGCTGAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR-3UTR CAA 90 bp | ATATCTTATTTGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTTCTGCCTCCTCTTTTCTTGCATATTTaGTCACTGCCTCAGCAACAA | + |
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Preference number: 3 (lower is better) Translates to: ISYLKVSYSQLGLLFLPPLFLHI*SLPQQQ Trigger: TTGTTGCTGAGGCAGTGACAAAATATGCAAGAAAAG...AGGAGGCAGAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| 3UTR TCA 72 bp | GTCCACATAGAGCAACCTCAAACCAAAGACAACACATaGCAGGCTTATTACATTTCATCAATGTATACACTG | + |
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Preference number: 3 (lower is better) Translates to: VHIEQPQTKDNT*QAYYISSMYTL Trigger: CAGTGTATACATTGATGAAATGTAATAAGCCTGTCATGTGTTGTCTTTGGTTTGAGGTTGCTCTATGTGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR GCA 90 bp | CTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGAGAGGTGGAGAAGGCTCCGTCCGACTTaGGCTTGGCCAGTAGGACCT | + |
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Preference number: 4 (lower is better) Translates to: LLLREVACAQAAFQERWRRLRPT*AWPVGP Trigger: AGGTCCTACTGGCCAAGCGCAAGTCGGACGGAGCCT...TCTCCACCTCTCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR CCA 90 bp | TACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCCGTTCCCGCTGTAGATaGAAGAAGAGCTCTCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: YQEALSQSAGHLHPPLSLRSRCR*KKSSPP Trigger: CGGGGGAGAGCTCTTCTTCCATCTACAGCGGGAACG...GAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR CCA 90 bp | TACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCCGCAGAAGGTGGACGTaGTCTCCTCAGGCTCTACAC | + |
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Preference number: 4 (lower is better) Translates to: YQEALSQSAGHLHPPLSLRRRWT*SPQALH Trigger: GTGTAGAGCCTGAGGAGACCACGTCCACCTTCTGCG...GAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018012.14 |
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| CDS-3UTR CCA 90 bp | TCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCAGCATTTGAACCGTCCGACTTGCGCTTaGCCAGTAGGACCTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: SLPECWSPTSSPFSQHLNRPTCA*PVGPSR Trigger: ACGGGAAGGTCCTACTGGCCAAGCGCAAGTCGGACG...GTTCAAATGCTGAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR CCA 90 bp | CAAGTCAGAACTGCAGACGGCTGGATACTGGGGAGCCTGAACTGTTCCTTCACATGCCTCTGGTCCTTGTaGAGAAGGCCTTGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QVRTADGWILGSLNCSFTCLWSL*RRPCRR Trigger: CCTCCTGCAAGGCCTTCTCCACAAGGACCAGAGGCA...TGTGAAGGAACAGTTCAGGCTCCCCAGTATCCAGCCGTCTGCAGTTCTGACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCAGTGAGATGACTCAGCTTTGGCTGAAGACCGTAGCAATAGATGAGCCACCCAGCCGCTGCCTCTaGTCCTTGTGGAGAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PSSEMTQLWLKTVAIDEPPSRCL*SLWRRP Trigger: AGGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGG...TGGCTCATCTATTGCTACGGTCTTCAGCCAAAGCTGAGTCATCTCACTGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR TCA 90 bp | CAAGTCAGAACTGCAGACGGCTGGATACTGGGGAGCCTGAACTGTTCCTTCACAGGCATTTGGGTTGGCTaGTGGCCCCAGGTTGATGTT | + |
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Preference number: 4 (lower is better) Translates to: QVRTADGWILGSLNCSFTGIWVG*WPQVDV Trigger: AACATCAACCTGGGGCCATCAGCCAACCCAAATGCC...TGTGAAGGAACAGTTCAGGCTCCCCAGTATCCAGCCGTCTGCAGTTCTGACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR TCA 90 bp | ATTCAGATACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTGGCATTTGGGTTGGCTaGTGGCCCCAGGTTGATGTT | + |
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Preference number: 4 (lower is better) Translates to: IQIPRGSLPECWSPTSSPGIWVG*WPQVDV Trigger: AACATCAACCTGGGGCCATCAGCCAACCCAAATGCC...AGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTATCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR TCA 90 bp | ATTCAGATACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTCCAAGGAATGCACTTaGAGCCCCAGAACTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IQIPRGSLPECWSPTSSPSKECT*SPRTAG Trigger: GCCAGCAGTTCTGGGGCTTCAAGTGCATTCCTTGGA...AGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTATCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCAGTGAGATGACTCAGCTTTGGCTGAAGACCGTAGCAATAGATGAGCCACGTCCGACTTGCGCTTaGCCAGTAGGACCTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: PSSEMTQLWLKTVAIDEPRPTCA*PVGPSR Trigger: ACGGGAAGGTCCTACTGGCCAAGCGCAAGTCGGACG...TGGCTCATCTATTGCTACGGTCTTCAGCCAAAGCTGAGTCATCTCACTGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR CCA 90 bp | CTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGAGAGGTGGAGACAGGGGTGCAGCCAATaGACTTGGACACAGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LLLREVACAQAAFQERWRQGCSQ*TWTQLP Trigger: AGGAAGCTGTGTCCAAGTCCATTGGCTGCACCCCTG...TCTCCACCTCTCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR GCA 90 bp | TCCCCTCTTCTCCGAGCCACTGTGTCTTACTTCTTTGGGACTCATTGTGTCTTAAGGCTCCGTCCGACTTaGGCTTGGCCAGTAGGACCT | + |
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Preference number: 4 (lower is better) Translates to: SPLLRATVSYFFGTHCVLRLRPT*AWPVGP Trigger: AGGTCCTACTGGCCAAGCGCAAGTCGGACGGAGCCT...TAAGACACAATGAGTCCCAAAGAAGTAAGACACAGTGGCTCGGAGAAGAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR GCA 90 bp | GTTCCTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTGGGGCTCCAGGAACCTaGGTTCCCGCTGTAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: VPSHDGKCVSPLLRATVSGAPGT*VPAVDG Trigger: TCCATCTACAGCGGGAACGCAGGTTCCTGGAGCCCC...AGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR GCA 90 bp | CATTTGAACCCTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGATTGTGGAGAAGGCCTTaGAGGAGGTCACAGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: HLNPFTTRGSLCPGCIPGLWRRP*RRSQAA Trigger: GGCTGCCTGTGACCTCCTGCAAGGCCTTCTCCACAA...TCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAGGGTTCAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCAGTGAGATGACTCAGCTTTGGCTGAAGACCGTAGCAATAGATGAGCCACGTTCCCGCTGTAGATaGAAGAAGAGCTCTCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: PSSEMTQLWLKTVAIDEPRSRCR*KKSSPP Trigger: CGGGGGAGAGCTCTTCTTCCATCTACAGCGGGAACG...TGGCTCATCTATTGCTACGGTCTTCAGCCAAAGCTGAGTCATCTCACTGGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR CCA 90 bp | CTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTTACTCCCAGCCGCTGCCTCTaGTCCTTGTGGAGAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LHMMENVFPLFSEPLCLTPSRCL*SLWRRP Trigger: AGGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGG...AGTAAGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR CCA 90 bp | CTTAGTGCAGCAGAAGATAGTTCCAGCAGGTACCGGCTGGGCTTGGTGGCTTTCGTTTGGGTTGAAGGGTaGAGTCAGCCTCTTGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: LSAAEDSSSRYRLGLVAFVWVEG*SQPLVV Trigger: TACCACAAGAGGCTGACTCCACCCTTCAACCCAAAC...GAAAGCCACCAAGCCCAGCCGGTACCTGCTGGAACTATCTTCTGCTGCACTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGCAGCAGAAGATAGTTCCAGCAGGTACCGGCTGGGCTTGGTGGCTTTCCTTTACGAAGCACTTCTaGAGCCAAGTACTCAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVQQKIVPAGTGWAWWLSFTKHF*SQVLRG Trigger: ACCCCTGAGTACTTGGCTCCAGAAGTGCTTCGTAAA...GGAAAGCCACCAAGCCCAGCCGGTACCTGCTGGAACTATCTTCTGCTGCACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018012.14 |
||
| CDS-3UTR CCA 90 bp | TACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCGGAGTCAGCCTCTTGTaGTACAGATCATCCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YQEALSQSAGHLHPPLSLGVSLL*YRSSQF Trigger: AAACTGGGATGATCTGTACCACAAGAGGCTGACTCC...GAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CCA 90 bp | CATTTGAACCCTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGACAGGGGTGCAGCCAATaGACTTGGACACAGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLNPFTTRGSLCPGCIPGQGCSQ*TWTQLP Trigger: AGGAAGCTGTGTCCAAGTCCATTGGCTGCACCCCTG...TCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAGGGTTCAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCAGTGAGATGACTCAGCTTTGGCTGAAGACCGTAGCAATAGATGAGCCACGTTGCGCTCTGCCATaGTGTGGTTCTGCTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSEMTQLWLKTVAIDEPRCALP*CGSALC Trigger: ACAAAGAGCAGAACCACATCATGGCAGAGCGCAACG...TGGCTCATCTATTGCTACGGTCTTCAGCCAAAGCTGAGTCATCTCACTGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR TCA 90 bp | CTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTTACTTCGGTCAGTACCACGTaGCCCTGGCAGTCCAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHMMENVFPLFSEPLCLTSVSTT*PWQSKR Trigger: TCTCTTGGACTGCCAGGGTCACGTGGTACTGACCGA...AGTAAGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018012.14 |
||
| CDS-3UTR TCA 90 bp | GTTCCTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTCTTCCACGTTTGGGTTaGAGGGTGGAGTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSHDGKCVSPLLRATVSLPRLG*RVESAS Trigger: AGAGGCTGACTCCACCCTTCAACCCAAACGTGGAAG...AGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR GCA 90 bp | GTTCCTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTCCCACGAGGAAAGGATaGCGCACGTTCTTCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPSHDGKCVSPLLRATVSPTRKG*RTFFNS Trigger: GCTGTTGAAGAACGTGCGGCATCCTTTCCTCGTGGG...AGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTTACTTTGTGGAGAAGGCCTTaGAGGAGGTCACAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHMMENVFPLFSEPLCLTLWRRP*RRSQAA Trigger: GGCTGCCTGTGACCTCCTGCAAGGCCTTCTCCACAA...AGTAAGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTTACTCCACGGTGTCAGGGGTaGAGCCAATGGACTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LHMMENVFPLFSEPLCLTPRCQG*SQWTWT Trigger: TGTCCAAGTCCATTGGCTGCACCCCTGACACCGTGG...AGTAAGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CCA 90 bp | ATTCAGATACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTAAAGTAGAGTTTCTCTaGGGTCTGGAAGGAGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IQIPRGSLPECWSPTSSPKVEFL*GLEGVA Trigger: CGCTACTCCTTCCAGACCCCAGAGAAACTCTACTTT...AGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTATCTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CCA 90 bp | TTGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTTCTGCCTCCTGGTAGTCATTGCCTCTGGTCCTTGTaGAGAAGGCCTTGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKVSYSQLGLLFLPPGSHCLWSL*RRPCRR Trigger: CCTCCTGCAAGGCCTTCTCCACAAGGACCAGAGGCA...ATGACTACCAGGAGGCAGAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTCAGAACTGCAGACGGCTGGATACTGGGGAGCCTGAACTGTTCCTTCACATTTACGAAGCACTTCTaGAGCCAAGTACTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QVRTADGWILGSLNCSFTFTKHF*SQVLAV Trigger: GACTGCCAGTACTTGGCTCCAGAAGTGCTTCGTAAA...TGTGAAGGAACAGTTCAGGCTCCCCAGTATCCAGCCGTCTGCAGTTCTGACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117123.2 |
||
| CDS-3UTR TCA 90 bp | GTTCCTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTCGTTGCGCTCTGCCATaGTGTGGTTCTGCTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VPSHDGKCVSPLLRATVSRCALP*CGSALC Trigger: ACAAAGAGCAGAACCACATCATGGCAGAGCGCAACG...AGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTTCTGCCTCCTGGTAGTCATCTTCCACGTTTGGGTTaGAGGGTGGAGTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKVSYSQLGLLFLPPGSHLPRLG*RVESAS Trigger: AGAGGCTGACTCCACCCTTCAACCCAAACGTGGAAG...ATGACTACCAGGAGGCAGAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTTACTCCCACGAGGAAAGGATaGCGCACGTTCTTCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHMMENVFPLFSEPLCLTPTRKG*RTFFNS Trigger: GCTGTTGAAGAACGTGCGGCATCCTTTCCTCGTGGG...AGTAAGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCTCTTCTCCGAGCCACTGTGTCTTACTTCTTTGGGACTCATTGTGTCTTAGCACCACCAGTCCACTaGTCGATCGTAAGGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLRATVSYFFGTHCVLAPPVH*SIVRLF Trigger: AAAGAGCCTTACGATCGAGCAGTGGACTGGTGGTGC...TAAGACACAATGAGTCCCAAAGAAGTAAGACACAGTGGCTCGGAGAAGAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCACTTGGGATATCTTATTTGAAGGTATCTTATTCCCAGCTCGGACTTCTGCCACGGTGTCAGGGGTaGAGCCAATGGACTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RPLGISYLKVSYSQLGLLPRCQG*SQWTWT Trigger: TGTCCAAGTCCATTGGCTGCACCCCTGACACCGTGG...CAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATATCCCAAGTGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CCA 90 bp | CATTTGAACCCTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGAGTTTGGGTTGAAGGGTaGAGTCAGCCTCTTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HLNPFTTRGSLCPGCIPGVWVEG*SQPLVV Trigger: TACCACAAGAGGCTGACTCCACCCTTCAACCCAAAC...TCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAGGGTTCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGAGAGGTGGAGATTCCTGGGTGAACTCTaGGTCAAAGTGTTTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLREVACAQAAFQERWRFLGEL*VKVFQV Trigger: GACTTGAAACACTTTGACCCAGAGTTCACCCAGGAA...TCTCCACCTCTCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| 3UTR CAA 72 bp | TCTCAGCATTTGAACCCTTTTACTACGAGAGGTAGCTaGTGCCCAGGCTGCATTCCAGGAGAGGTGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SQHLNPFTTRGS*CPGCIPGEVEI Trigger: AATCTCCACCTCTCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAGGGTTCAAATGCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR TCA 90 bp | ATTCAGATACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTGGGATCTGTAGCGGCTaGTGTAAAATATTCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: IQIPRGSLPECWSPTSSPGICSG*CKIFSY Trigger: GTATGAGAATATTTTACATCAGCCGCTACAGATCCC...AGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTATCTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCACTTGGGATATCTTATTTGAAGGTATCTTATTCCCAGCTCGGACTTCTGTCCAAGGAATGCACTTaGAGCCCCAGAACTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPLGISYLKVSYSQLGLLSKECT*SPRTAG Trigger: GCCAGCAGTTCTGGGGCTTCAAGTGCATTCCTTGGA...CAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATATCCCAAGTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| 3UTR CAA 72 bp | TCTCCGAGCCACTGTGTCTTACTTCTTTGGGACTCATaGTGTCTTAGTGCAGCAGAAGATAGTTCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSHCVLLLWDS*CLSAAEDSSSR Trigger: CCTGCTGGAACTATCTTCTGCTGCACTAAGACACAATGAGTCCCAAAGAAGTAAGACACAGTGGCTCGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTTCTGCCTCCTGGTAGTCATAGAGCTCTCCCCCGTTaGCATAGTCAAGCACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKVSYSQLGLLFLPPGSHRALPR*HSQAQS Trigger: ACTTTGTGCTTGACTATGTCAACGGGGGAGAGCTCT...ATGACTACCAGGAGGCAGAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCAGCATTTGAACCCCAGTTTATGGGACTaGAGAACATGTGGTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLPECWSPTSSPFSQHLNPSLWD*RTCGSL Trigger: TAAAGAACCACATGTTCTTCAGTCCCATAAACTGGG...GTTCAAATGCTGAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCAGTGAGATGACTCAGCTTTGGCTGAAGACCGTAGCAATAGATGAGCCACGCTCTGCCATGATGTaGTTCTGCTCTTTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSSEMTQLWLKTVAIDEPRSAMM*FCSLFF Trigger: AAAGAACAAAGAGCAGAACCACATCATGGCAGAGCG...TGGCTCATCTATTGCTACGGTCTTCAGCCAAAGCTGAGTCATCTCACTGGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGAGAGGTGGAGAGGACTGAAGAACATGTaGTTCTTTATGTCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLREVACAQAAFQERWRGLKNM*FFMSRK Trigger: CTTTCTGGACATAAAGAACCACATGTTCTTCAGTCC...TCTCCACCTCTCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTTACTGCTCTACACATTCCTTaGAAAGGCCGAAATCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHMMENVFPLFSEPLCLTALHIP*KGRNRS Trigger: TGACCGATTTCGGCCTTTGCAAGGAATGTGTAGAGC...AGTAAGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018012.14 |
||
| CDS-3UTR GCA 90 bp | TCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCAGCATTTGAACGTCATCATCATCCTGTaGATAGGAAAATCCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLPECWSPTSSPFSQHLNVIIIL*IGKSKE Trigger: TTCCTTGGATTTTCCTATGCACAGGATGATGATGAC...GTTCAAATGCTGAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCTCTTCTCCGAGCCACTGTGTCTTACTTCTTTGGGACTCATTGTGTCTTACGCTCTGCCATGATGTaGTTCTGCTCTTTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLRATVSYFFGTHCVLRSAMM*FCSLFF Trigger: AAAGAACAAAGAGCAGAACCACATCATGGCAGAGCG...TAAGACACAATGAGTCCCAAAGAAGTAAGACACAGTGGCTCGGAGAAGAGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR GCA 90 bp | ATATCTTATTTGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTTCTGCCTCCTGCACCACCAGTCCACTaGTCGATCGTAAGGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISYLKVSYSQLGLLFLPPAPPVH*SIVRLF Trigger: AAAGAGCCTTACGATCGAGCAGTGGACTGGTGGTGC...AGGAGGCAGAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCACTTGGGATATCTTATTTGAAGGTATCTTATTCCCAGCTCGGACTTCTGGGAGTCAGCCTCTTGTaGTACAGATCATCCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPLGISYLKVSYSQLGLLGVSLL*YRSSQF Trigger: AAACTGGGATGATCTGTACCACAAGAGGCTGACTCC...CAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATATCCCAAGTGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| 3UTR CAA 72 bp | AGGCTGGAAGGGAGTAGGCCACTTGGGATATCTTATTaGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLEGSRPLGISY*KVSYSQLGLLF Trigger: AAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATATCCCAAGTGGCCTACTCCCTTCCAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR TCA 90 bp | CTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTTACTGGGATCTGTAGCGGCTaGTGTAAAATATTCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LHMMENVFPLFSEPLCLTGICSG*CKIFSY Trigger: GTATGAGAATATTTTACATCAGCCGCTACAGATCCC...AGTAAGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR TCA 90 bp | TTGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTTCTGCCTCCTGGTAGTCATCCCAGTTTATGGGACTaGAGAACATGTGGTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LKVSYSQLGLLFLPPGSHPSLWD*RTCGSL Trigger: TAAAGAACCACATGTTCTTCAGTCCCATAAACTGGG...ATGACTACCAGGAGGCAGAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCTCTTCTCCGAGCCACTGTGTCTTACTTCTTTGGGACTCATTGTGTCTTAGTCATCATCATCCTGTaGATAGGAAAATCCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPLLRATVSYFFGTHCVLVIIIL*IGKSKE Trigger: TTCCTTGGATTTTCCTATGCACAGGATGATGATGAC...TAAGACACAATGAGTCCCAAAGAAGTAAGACACAGTGGCTCGGAGAAGAGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCTCTTCTCCGAGCCACTGTGTCTTACTTCTTTGGGACTCATTGTGTCTTAGGACTGAAGAACATGTaGTTCTTTATGTCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLRATVSYFFGTHCVLGLKNM*FFMSRK Trigger: CTTTCTGGACATAAAGAACCACATGTTCTTCAGTCC...TAAGACACAATGAGTCCCAAAGAAGTAAGACACAGTGGCTCGGAGAAGAGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCACTTGGGATATCTTATTTGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTCCTGGGTGAACTCTaGGTCAAAGTGTTTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPLGISYLKVSYSQLGLLFLGEL*VKVFQV Trigger: GACTTGAAACACTTTGACCCAGAGTTCACCCAGGAA...CAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATATCCCAAGTGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| 3UTR CAA 72 bp | AGTCCAAATAGATGTTCTTTACTTTTCTTGCATATTTaGTCACTGCCTCAGCAACAACAAACAAGACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPNRCSLLFLHI*SLPQQQQTRQN Trigger: GTTTTGTCTTGTTTGTTGTTGCTGAGGCAGTGACAAAATATGCAAGAAAAGTAAAGAACATCTATTTGGACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CCA 90 bp | TCCAGAAAGTCTTCCTTGGAGCCCAGCCGCTGCCTCTGGTCCTTGTaGAGAAGGCCTTGCAGGAGGTCACAGGCAGCCACTGTCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRKSSLEPSRCLWSL*RRPCRRSQAATVRP Trigger: AGGCCGGACAGTGGCTGCCTGTGACCTCCTGCAAGGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAGGAAGACTTTCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS GCA 90 bp | GATGATGTTGAGAGAGTGAAGGTAACCAATGGCGCTCGCCACCTCTaGAGTGTAGAACCGGGCCCGGGGCTCCAGGAACCTGCGTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: DDVERVKVTNGARHL*SVEPGPGLQEPAFP Trigger: CGGGAACGCAGGTTCCTGGAGCCCCGGGCCCGGTTCTACACTGCAGAGGTGGCGAGCGCCATTGGTTACCTTCACTCTCTCAACATCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGTGCAGCAGAAGATAGTTCCAGCAGGTACCGGCTGGGCTTGGTGGCTTTCGGCCGGGCATTTGGGTaGGCTGATGGCCCCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSAAEDSSSRYRLGLVAFGRAFG*ADGPRL Trigger: CAACCTGGGGCCATCAGCCAACCCAAATGCCCGGCC...GAAAGCCACCAAGCCCAGCCGGTACCTGCTGGAACTATCTTCTGCTGCACTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | ATTCAGATACCAAGAGGCTCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTCCGTCCGACTTGCGCTaGGCCAGTAGGACCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: IQIPRGSLPECWSPTSSPPSDLR*ASRTFP Trigger: CGGGAAGGTCCTACTGGCCAAGCGCAAGTCGGACGG...AGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTTGGTATCTGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS GCA 90 bp | TGCCGCAGAAGGTGGACGTGGTCTCCTCAGGCTCTACACATTCCTTaGAAAGGCCGAAATCGGTCAGTACCACGTGACCCTGGCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CRRRWTWSPQALHIP*KGRNRSVPRDPGSP Trigger: TGGACTGCCAGGGTCACGTGGTACTGACCGATTTCGGCCTTTGCAAGGAATGTGTAGAGCCTGAGGAGACCACGTCCACCTTCTGCGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018012.14 |
||
| CDS-3UTR CAA 90 bp | CTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGAGAGGTGGAGACGCTGCCTCTGGTCCTaGTGGAGAAGGCCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLREVACAQAAFQERWRRCLWS*WRRPCR Trigger: CCTGCAAGGCCTTCTCCACAAGGACCAGAGGCAGCG...TCTCCACCTCTCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CCA 90 bp | TTCTTTATGTCCAGAAAGTCTTCCTTGGAGCCCAGCCGCTGCCTCTaGTCCTTGTGGAGAAGGCCTTGCAGGAGGTCACAGGCAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: FFMSRKSSLEPSRCL*SLWRRPCRRSQAAT Trigger: AGTGGCTGCCTGTGACCTCCTGCAAGGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAGGAAGACTTTCTGGACATAAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCAGCATTTGAACAAGGCTCCGTCCGACTaGCGCTTGGCCAGTAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SLPECWSPTSSPFSQHLNKAPSD*RLASRT Trigger: GGTCCTACTGGCCAAGCGCAAGTCGGACGGAGCCTT...GTTCAAATGCTGAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCAGCATTTGAACCGCTGCCTCTGGTCCTaGTGGAGAAGGCCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLPECWSPTSSPFSQHLNRCLWS*WRRPCR Trigger: CCTGCAAGGCCTTCTCCACAAGGACCAGAGGCAGCG...GTTCAAATGCTGAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTGCAGCAGAAGATAGTTCCAGCAGGTACCGGCTGGGCTTGGTGGCTTTCCCCTTCCACGTTTGGGTaGAAGGGTGGAGTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVQQKIVPAGTGWAWWLSPSTFG*KGGVSL Trigger: GAGGCTGACTCCACCCTTCAACCCAAACGTGGAAGG...GGAAAGCCACCAAGCCCAGCCGGTACCTGCTGGAACTATCTTCTGCTGCACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS GCA 90 bp | ATGTGGTTCTTTATGTCCAGAAAGTCTTCCTTGGAGCCCAGCCGCTaGCTCTGGTCCTTGTGGAGAAGGCCTTGCAGGAGGTCACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MWFFMSRKSSLEPSR*LWSLWRRPCRRSQA Trigger: TGCCTGTGACCTCCTGCAAGGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAGGAAGACTTTCTGGACATAAAGAACCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTCCCAGAGTGCTGGTCACCTACATCCTCCCCTTTCTCTCAGCATTTGAACTCCAGAAAGTCTTCCTaGGAGCCCAGCCGCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLPECWSPTSSPFSQHLNSRKSS*EPSRCL Trigger: GAGGCAGCGGCTGGGCTCCAAGGAAGACTTTCTGGA...GTTCAAATGCTGAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | GTTCCTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTAAGGCTCCGTCCGACTaGCGCTTGGCCAGTAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: VPSHDGKCVSPLLRATVSKAPSD*RLASRT Trigger: GGTCCTACTGGCCAAGCGCAAGTCGGACGGAGCCTT...AGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | CATTTGAACCCTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGACTTGTGGAGAAGGCCTaGCAGGAGGTCACAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLNPFTTRGSLCPGCIPGLVEKA*QEVTGS Trigger: GCTGCCTGTGACCTCCTGCAAGGCCTTCTCCACAAG...TCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAGGGTTCAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | CATTTGAACCCTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGATCCAGAAAGTCTTCCTaGGAGCCCAGCCGCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLNPFTTRGSLCPGCIPGSRKSS*EPSRCL Trigger: GAGGCAGCGGCTGGGCTCCAAGGAAGACTTTCTGGA...TCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAGGGTTCAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CCA 90 bp | AGGGGTGCAGCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTaGGTCAAAGTGTTTCAAGTCAGCAGGTCCTTCCACGTTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RGAANGLGHSFLGEL*VKVFQVSRSFHVWV Trigger: AACCCAAACGTGGAAGGACCTGCTGACTTGAAACACTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGCACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | CATTTGAACCCTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGAAGGTTGATGTTCCCATaGGCCCTAGAGGGCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HLNPFTTRGSLCPGCIPGRLMFP*ALEGCG Trigger: CCCACAGCCCTCTAGGGCCAATGGGAACATCAACCT...TCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAGGGTTCAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCACTTGGGATATCTTATTTGAAGGTATCTTATTCCCAGCTCGGACTTCTGCCGTCCGACTTGCGCTaGGCCAGTAGGACCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RPLGISYLKVSYSQLGLLPSDLR*ASRTFP Trigger: CGGGAAGGTCCTACTGGCCAAGCGCAAGTCGGACGG...CAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATATCCCAAGTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | GTTCCTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTCTTGTGGAGAAGGCCTaGCAGGAGGTCACAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPSHDGKCVSPLLRATVSLVEKA*QEVTGS Trigger: GCTGCCTGTGACCTCCTGCAAGGCCTTCTCCACAAG...AGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | CATTTGAACCCTTTTACTACGAGAGGTAGCTTGTGCCCAGGCTGCATTCCAGGACCTTCCACGTTTGGGTaGAAGGGTGGAGTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLNPFTTRGSLCPGCIPGPSTFG*KGGVSL Trigger: GAGGCTGACTCCACCCTTCAACCCAAACGTGGAAGG...TCCTGGAATGCAGCCTGGGCACAAGCTACCTCTCGTAGTAAAAGGGTTCAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCTCTTCTCCGAGCCACTGTGTCTTACTTCTTTGGGACTCATTGTGTCTTAGCTGATGGCCCCAGGTaGATGTTCCCATTGGCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SPLLRATVSYFFGTHCVLADGPR*MFPLAL Trigger: TAGGGCCAATGGGAACATCAACCTGGGGCCATCAGC...TAAGACACAATGAGTCCCAAAGAAGTAAGACACAGTGGCTCGGAGAAGAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | TTGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTTCTGCCTCCTGGTAGTCATAGGTTGATGTTCCCATaGGCCCTAGAGGGCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LKVSYSQLGLLFLPPGSHRLMFP*ALEGCG Trigger: CCCACAGCCCTCTAGGGCCAATGGGAACATCAACCT...ATGACTACCAGGAGGCAGAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | CTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTTACTGCTGATGGCCCCAGGTaGATGTTCCCATTGGCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LHMMENVFPLFSEPLCLTADGPR*MFPLAL Trigger: TAGGGCCAATGGGAACATCAACCTGGGGCCATCAGC...AGTAAGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | GTTCCTTCACATGATGGAAAATGTGTTTCCCCTCTTCTCCGAGCCACTGTGTCTTTCTTCAACAGCACGTaGCGCTCTGCCATGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPSHDGKCVSPLLRATVSFFNST*RSAMMW Trigger: CCACATCATGGCAGAGCGCAACGTGCTGTTGAAGAA...AGACACAGTGGCTCGGAGAAGAGGGGAAACACATTTTCCATCATGTGAAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CCA 90 bp | AAAGTGTTTCAAGTCAGCAGGTCCTTCCACGTTTGGGTTGAAGGGTaGAGTCAGCCTCTTGTGGTACAGATCATCCCAGTTTATGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: KVFQVSRSFHVWVEG*SQPLVVQIIPVYGT Trigger: AGTCCCATAAACTGGGATGATCTGTACCACAAGAGGCTGACTCCACCCTTCAACCCAAACGTGGAAGGACCTGCTGACTTGAAACACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS-3UTR CAA 90 bp | ATATCTTATTTGAAGGTATCTTATTCCCAGCTCGGACTTCTGTTTCTGCCTCCTTTCTTCAACAGCACGTaGCGCTCTGCCATGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ISYLKVSYSQLGLLFLPPFFNST*RSAMMW Trigger: CCACATCATGGCAGAGCGCAACGTGCTGTTGAAGAA...AGGAGGCAGAAACAGAAGTCCGAGCTGGGAATAAGATACCTTCAAATAAGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS GCA 72 bp | CTGCAGTGTAGAACCGGGCCCGGGGCTCCAGGAACCTaGGTTCCCGCTGTAGATGGAAGAAGAGCTCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LQCRTGPGAPGT*VPAVDGRRALP Trigger: GGGGAGAGCTCTTCTTCCATCTACAGCGGGAACGCAGGTTCCTGGAGCCCCGGGCCCGGTTCTACACTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CAA 90 bp | GGCCGGGCATTTGGGTTGGCTGATGGCCCCAGGTTGATGTTCCCATaGGCCCTAGAGGGCTGTGGGCTAGGAACTCCAACTGGGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRAFGLADGPRLMFP*ALEGCGLGTPTGLE Trigger: CTCCAGCCCAGTTGGAGTTCCTAGCCCACAGCCCTCTAGGGCCAATGGGAACATCAACCTGGGGCCATCAGCCAACCCAAATGCCCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS GCA 72 bp | GAGAGAGTGAAGGTAACCAATGGCGCTCGCCACCTCTaGAGTGTAGAACCGGGCCCGGGGCTCCAGGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: ERVKVTNGARHL*SVEPGPGLQEP Trigger: AGGTTCCTGGAGCCCCGGGCCCGGTTCTACACTGCAGAGGTGGCGAGCGCCATTGGTTACCTTCACTCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CCA 72 bp | TCTTCCTTGGAGCCCAGCCGCTGCCTCTGGTCCTTGTaGAGAAGGCCTTGCAGGAGGTCACAGGCAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SSLEPSRCLWSL*RRPCRRSQAAT Trigger: AGTGGCTGCCTGTGACCTCCTGCAAGGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAGGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CAA 72 bp | GTGGGCCGGGCATTTGGGTTGGCTGATGGCCCCAGGTaGATGTTCCCATTGGCCCTAGAGGGCTGTGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: VGRAFGLADGPR*MFPLALEGCGL Trigger: TAGCCCACAGCCCTCTAGGGCCAATGGGAACATCAACCTGGGGCCATCAGCCAACCCAAATGCCCGGCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CAA 90 bp | ATGTCCAGAAAGTCTTCCTTGGAGCCCAGCCGCTGCCTCTGGTCCTaGTGGAGAAGGCCTTGCAGGAGGTCACAGGCAGCCACTGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: MSRKSSLEPSRCLWS*WRRPCRRSQAATVR Trigger: CCGGACAGTGGCTGCCTGTGACCTCCTGCAAGGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAGGAAGACTTTCTGGACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CCA 72 bp | CCTTCACGGCGTAGAAGGCTCCGTCCGACTTGCGCTTaGCCAGTAGGACCTTCCCGTAGTTCCCTTTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PSRRRRLRPTCA*PVGPSRSSLCQ Trigger: TTGGCAAAGGGAACTACGGGAAGGTCCTACTGGCCAAGCGCAAGTCGGACGGAGCCTTCTACGCCGTGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CCA 72 bp | TCCAGAAAGTCTTCCTTGGAGCCCAGCCGCTGCCTCTaGTCCTTGTGGAGAAGGCCTTGCAGGAGGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SRKSSLEPSRCL*SLWRRPCRRSQ Trigger: CTGTGACCTCCTGCAAGGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAGGAAGACTTTCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CAA 72 bp | CTGCTGGCCACGGTGTCAGGGGTGCAGCCAATGGACTaGGACACAGCTTCCTGGGTGAACTCTGGGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLATVSGVQPMD*DTASWVNSGSK Trigger: CTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGCTGCACCCCTGACACCGTGGCCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CAA 90 bp | TCAAAGTCTGTGGGCCGGGCATTTGGGTTGGCTGATGGCCCCAGGTaGATGTTCCCATTGGCCCTAGAGGGCTGTGGGCTAGGAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SKSVGRAFGLADGPR*MFPLALEGCGLGTP Trigger: TGGAGTTCCTAGCCCACAGCCCTCTAGGGCCAATGGGAACATCAACCTGGGGCCATCAGCCAACCCAAATGCCCGGCCCACAGACTTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS TCA 72 bp | GAAATCAAAGTCTGTGGGCCGGGCATTTGGGTTGGCTaGTGGCCCCAGGTTGATGTTCCCATTGGCCCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: EIKVCGPGIWVG*WPQVDVPIGPR Trigger: TCTAGGGCCAATGGGAACATCAACCTGGGGCCATCAGCCAACCCAAATGCCCGGCCCACAGACTTTGATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS GCA 72 bp | AGGTGGACGTGGTCTCCTCAGGCTCTACACATTCCTTaGAAAGGCCGAAATCGGTCAGTACCACGTGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: RWTWSPQALHIP*KGRNRSVPRDP Trigger: AGGGTCACGTGGTACTGACCGATTTCGGCCTTTGCAAGGAATGTGTAGAGCCTGAGGAGACCACGTCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018012.14 |
||
| CDS CAA 72 bp | TTGAGGAAATCAAAGTCTGTGGGCCGGGCATTTGGGTaGGCTGATGGCCCCAGGTTGATGTTCCCATTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRKSKSVGRAFG*ADGPRLMFPLA Trigger: GGCCAATGGGAACATCAACCTGGGGCCATCAGCCAACCCAAATGCCCGGCCCACAGACTTTGATTTCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS TCA 72 bp | GCAGCCACTGTCCGGCCTCCAGGGATCTGTAGCGGCTaGTGTAAAATATTCTCATACATCTGGGCCACGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AATVRPPGICSG*CKIFSYIWATS Trigger: TGACGTGGCCCAGATGTATGAGAATATTTTACATCAGCCGCTACAGATCCCTGGAGGCCGGACAGTGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CAA 90 bp | ATGGGACTGAAGAACATGTGGTTCTTTATGTCCAGAAAGTCTTCCTaGGAGCCCAGCCGCTGCCTCTGGTCCTTGTGGAGAAGGCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: MGLKNMWFFMSRKSS*EPSRCLWSLWRRPC Trigger: GCAAGGCCTTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAGGAAGACTTTCTGGACATAAAGAACCACATGTTCTTCAGTCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CCA 72 bp | GCCAATGGACTTGGACACAGCTTCCTGGGTGAACTCTaGGTCAAAGTGTTTCAAGTCAGCAGGTCCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ANGLGHSFLGEL*VKVFQVSRSFH Trigger: GTGGAAGGACCTGCTGACTTGAAACACTTTGACCCAGAGTTCACCCAGGAAGCTGTGTCCAAGTCCATTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CAA 90 bp | TCAGCAGGTCCTTCCACGTTTGGGTTGAAGGGTGGAGTCAGCCTCTaGTGGTACAGATCATCCCAGTTTATGGGACTGAAGAACATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SAGPSTFGLKGGVSL*WYRSSQFMGLKNMW Trigger: CCACATGTTCTTCAGTCCCATAAACTGGGATGATCTGTACCACAAGAGGCTGACTCCACCCTTCAACCCAAACGTGGAAGGACCTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS TCA 72 bp | CATTCCTTGCAAAGGCCGAAATCGGTCAGTACCACGTaGCCCTGGCAGTCCAAGAGAATGTTTTCTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HSLQRPKSVSTT*PWQSKRMFSGF Trigger: GAAGCCAGAAAACATTCTCTTGGACTGCCAGGGTCACGTGGTACTGACCGATTTCGGCCTTTGCAAGGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018012.14 |
||
| CDS CCA 72 bp | AGAACATGTGGTTCTTTATGTCCAGAAAGTCTTCCTTaGAGCCCAGCCGCTGCCTCTGGTCCTTGTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RTCGSLCPESLP*SPAAASGPCGE Trigger: TTCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAGGAAGACTTTCTGGACATAAAGAACCACATGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CAA 72 bp | AAGAACATGTGGTTCTTTATGTCCAGAAAGTCTTCCTaGGAGCCCAGCCGCTGCCTCTGGTCCTTGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KNMWFFMSRKSS*EPSRCLWSLWR Trigger: TCTCCACAAGGACCAGAGGCAGCGGCTGGGCTCCAAGGAAGACTTTCTGGACATAAAGAACCACATGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS TCA 72 bp | AGTGTTTCAAGTCAGCAGGTCCTTCCACGTTTGGGTTaGAGGGTGGAGTCAGCCTCTTGTGGTACAGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: SVSSQQVLPRLG*RVESASCGTDH Trigger: ATGATCTGTACCACAAGAGGCTGACTCCACCCTTCAACCCAAACGTGGAAGGACCTGCTGACTTGAAACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018012.14 ENSMUST00000117123.2 |
||
| CDS CCA 72 bp | CACTGCTCGATCGTAAGGCTCTTTACGAAGCACTTCTaGAGCCAAGTACTGGCAGTCCAAGAGAATGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: HCSIVRLFTKHF*SQVLAVQENVF Trigger: GAAAACATTCTCTTGGACTGCCAGTACTTGGCTCCAGAAGTGCTTCGTAAAGAGCCTTACGATCGAGCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117123.2 |
||