Pregenerated sensors for SGIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028524Ensembl transcript IDs: ENSMUST00000066824.14, ENSMUST00000072481.12, ENSMUST00000080728.13, ENSMUST00000106882.9, ENSMUST00000149547.2, ENSMUST00000156596.8, ENSMUST00000183855.8
Found 574 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGTGGCTGGTACAGTTTTTGGAGGCAGAGGTGGAGGTGTTCCAGTaGGGAAAGGTCTTGCTAGCTCTGGCGACTCCGTACTTGGGTTCA | + |
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Preference number: 1 (lower is better) Translates to: EWLVQFLEAEVEVFQ*GKVLLALATPYLGS Trigger: TGAACCCAAGTACGGAGTCGCCAGAGCTAGCAAGACCTTTCCCCACTGGAACACCTCCACCTCTGCCTCCAAAAACTGTACCAGCCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| 3UTR CCA 90 bp | GTTTACCTGTTGCAACTGTTAAGGGGGAGCCTGTTCGAGGCGGAGTaGCTGGTACAGTTTTTGGAGGCAGAGGTGGAGGTGTTCCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: VYLLQLLRGSLFEAE*LVQFLEAEVEVFQW Trigger: CCACTGGAACACCTCCACCTCTGCCTCCAAAAACTGTACCAGCCACTCCGCCTCGAACAGGCTCCCCCTTAACAGTTGCAACAGGTAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| 3UTR GCA 90 bp | GGATCCACTCTCACCATAAAGGTGAGAAGAAGGCAGGGGCACATCTaGGTTTGCCCATCAGGTATCGCTGGCAGAGCAAAGGTAGATTTG | + |
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Preference number: 1 (lower is better) Translates to: GSTLTIKVRRRQGHI*VCPSGIAGRAKVDL Trigger: CAAATCTACCTTTGCTCTGCCAGCGATACCTGATGGGCAAACGCAGATGTGCCCCTGCCTTCTTCTCACCTTTATGGTGAGAGTGGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR GCA 90 bp | ACACCTATAAGTAAATACTGCAGAACTGAGCAGCACAGTACTGGGTaGCGGAAGTCACTGCTGAATGCCGGGACTTTCCAGCTGACAGAC | + |
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Preference number: 1 (lower is better) Translates to: TPISKYCRTEQHSTG*RKSLLNAGTFQLTD Trigger: GTCTGTCAGCTGGAAAGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCTGCAGTATTTACTTATAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| 3UTR CCA 90 bp | AGGGGAGAAGTATACACACTGCCGAAATGCACAAGCATCTGCTCTTaGACTTTCCAGTCACCATTTGCACAGGAACAGGCTTTCGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: RGEVYTLPKCTSICS*TFQSPFAQEQAFEA Trigger: TGCCTCGAAAGCCTGTTCCTGTGCAAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTATACTTCTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR CCA 90 bp | GAGAAGAAGGCAGGGGCACATCTGCGTTTGCCCATCAGGTATCGCTaGCAGAGCAAAGGTAGATTTGCTTCCTTCAAAAGAAGAATTAAA | + |
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Preference number: 1 (lower is better) Translates to: EKKAGAHLRLPIRYR*QSKGRFASFKRRIK Trigger: TTTAATTCTTCTTTTGAAGGAAGCAAATCTACCTTTGCTCTGCCAGCGATACCTGATGGGCAAACGCAGATGTGCCCCTGCCTTCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR TCA 90 bp | TACGTCTTCAGAGTTAGAAGTTACTTTGGAATCATTTACATATTGTaGTGCAATGTTTCAGGGTCTGGAGAAGCCCCTTCCCTGCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: YVFRVRSYFGIIYIL*CNVSGSGEAPSLLG Trigger: GCCAAGCAGGGAAGGGGCTTCTCCAGACCCTGAAACATTGCATCACAATATGTAAATGATTCCAAAGTAACTTCTAACTCTGAAGACGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR GCA 90 bp | TACATTTTAAAACCATTAACAAATATTACACCTATAAGTAAATACTaGAGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTG | + |
|
Preference number: 1 (lower is better) Translates to: YILKPLTNITPISKY*RTEQHSTGCRKSLL Trigger: CAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCTGCAGTATTTACTTATAGGTGTAATATTTGTTAATGGTTTTAAAATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| 3UTR CAA 90 bp | GTGTTCCAGTGGGGAAAGGTCTTGCTAGCTCTGGCGACTCCGTACTaGGGTTCATCGGTTGGCCTGAACCCCATATCTCAGGCTGATCTA | + |
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Preference number: 2 (lower is better) Translates to: VFQWGKVLLALATPY*GSSVGLNPISQADL Trigger: TAGATCAGCCTGAGATATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGAGCTAGCAAGACCTTTCCCCACTGGAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| 3UTR-3UTR CCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTCAGTTCTCCAGGGCATaGATCTTCCAAATCCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTQFSRA*IFQILA Trigger: TGCAAGGATTTGGAAGATCCATGCCCTGGAGAACTG...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| 3UTR CAA 90 bp | CAGGGGAGAAGTATACACACTGCCGAAATGCACAAGCATCTGCTCTaGGACTTTCCAGTCACCATTTGCACAGGAACAGGCTTTCGAGGC | + |
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Preference number: 2 (lower is better) Translates to: QGRSIHTAEMHKHLL*DFPVTICTGTGFRG Trigger: GCCTCGAAAGCCTGTTCCTGTGCAAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTATACTTCTCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR-3UTR CCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCAGTTCTCCAGGGCATaGATCTTCCAAATCCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: ECRDFPADRPQVRTSVCVQFSRA*IFQILA Trigger: TGCAAGGATTTGGAAGATCCATGCCCTGGAGAACTG...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| 3UTR CAA 90 bp | TGTTTGCCACATCATTTCAGAGCCGTAAAGATTCTAGTTTACCTGTaGCAACTGTTAAGGGGGAGCCTGTTCGAGGCGGAGTGGCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: CLPHHFRAVKILVYL*QLLRGSLFEAEWLV Trigger: TACCAGCCACTCCGCCTCGAACAGGCTCCCCCTTAACAGTTGCAACAGGTAAACTAGAATCTTTACGGCTCTGAAATGATGTGGCAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| 3UTR-3UTR TCA 90 bp | GATGACACTTTGGGGGAAATGAATCAACCCAAGCCTCAATACCATCGCTGGGAACCACCCATTCCCCACTaGAGCTCTGAATTTTCACGT | + |
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Preference number: 2 (lower is better) Translates to: DDTLGEMNQPKPQYHRWEPPIPH*SSEFSR Trigger: ACGTGAAAATTCAGAGCTTCAGTGGGGAATGGGTGG...TTCCCAGCGATGGTATTGAGGCTTGGGTTGATTCATTTCCCCCAAAGTGTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCCGTAAAGATTCTAGTTTACCTGTTGCAACTGTTAAGGGGGAGCCTGTTCCCCATATCTCAGGCTaGTCTAAAAGAACTTCCGTC | + |
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Preference number: 2 (lower is better) Translates to: QSRKDSSLPVATVKGEPVPHISG*SKRTSV Trigger: GACGGAAGTTCTTTTAGATCAGCCTGAGATATGGGG...AACAGGCTCCCCCTTAACAGTTGCAACAGGTAAACTAGAATCTTTACGGCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACGAAGTCACTGCTGAATaGCGGGACTTTCCAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNEVTAE*RDFPAD Trigger: GTCAGCTGGAAAGTCCCGGCATTCAGCAGTGACTTC...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTTGTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACGAAGTCACTGCTGAATaGCGGGACTTTCCAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LLVRFEWIQNVIQQQMLHEVTAE*RDFPAD Trigger: GTCAGCTGGAAAGTCCCGGCATTCAGCAGTGACTTC...GTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGACAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTGCCACATCATTTCAGAGCCGTAAAGATTCTAGTTTACCTGTTGCAACTCTTGGGTTCATCGGTTaGCCTGAACCCCATATCTCA | + |
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Preference number: 2 (lower is better) Translates to: VFATSFQSRKDSSLPVATLGFIG*PEPHIS Trigger: TGAGATATGGGGTTCAGGCCAACCGATGAACCCAAG...AGTTGCAACAGGTAAACTAGAATCTTTACGGCTCTGAAATGATGTGGCAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| 3UTR CAA 90 bp | TCTATTGTCAGGATAATTGAGGTCATTACTAGCTGTGATGACACTTaGGGGGAAATGAATCAACCCAAGCCTCAATACCATCGCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SIVRIIEVITSCDDT*GEMNQPKPQYHRWE Trigger: TTCCCAGCGATGGTATTGAGGCTTGGGTTGATTCATTTCCCCCAAAGTGTCATCACAGCTAGTAATGACCTCAATTATCCTGACAATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR-3UTR CCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACACAGTTCTCCAGGGCATaGATCTTCCAAATCCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: VRTSVCVHQARLKHVSQTQFSRA*IFQILA Trigger: TGCAAGGATTTGGAAGATCCATGCCCTGGAGAACTG...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| 3UTR-3UTR GCA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTAGAAGTCACTGCTGAATaGCGGGACTTTCCAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: RCISVSIVPFNSTTIKLLEVTAE*RDFPAD Trigger: GTCAGCTGGAAAGTCCCGGCATTCAGCAGTGACTTC...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| 3UTR-3UTR GCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTGAAGTCACTGCTGAATaGCGGGACTTTCCAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LRFSMCGTPFMITINIIFEVTAE*RDFPAD Trigger: GTCAGCTGGAAAGTCCCGGCATTCAGCAGTGACTTC...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTCAGTTCTCCAGGGCATaGATCTTCCAAATCCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: FCLRFSMCGTPFMITINIQFSRA*IFQILA Trigger: TGCAAGGATTTGGAAGATCCATGCCCTGGAGAACTG...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATCAAAGGGAACCAGATGAAACAGCAAGGTACTCATTCTATTGTCAGGATATACACACTGCCGAAATaGACAAGCATCTGCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: FIKGNQMKQQGTHSIVRIYTLPK*TSICSW Trigger: CCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTA...TATCCTGACAATAGAATGAGTACCTTGCTGTTTCATCTGGTTCCCTTTGATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR-3UTR CCA 90 bp | TACACACTGCCGAAATGCACAAGCATCTGCTCTTGGACTTTCCAGTCACCATTTCTTGTCAGATTTGAGTaGATACAAAATGTGATTCAG | + |
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Preference number: 2 (lower is better) Translates to: YTLPKCTSICSWTFQSPFLVRFE*IQNVIQ Trigger: CTGAATCACATTTTGTATCCACTCAAATCTGACAAG...AAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR-3UTR TCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCAACTGCCTTACTGGAATaGAGGTACAGTTTACAAATA | + |
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Preference number: 2 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPTALLE*RYSLQI Trigger: TATTTGTAAACTGTACCTTCATTCCAGTAAGGCAGT...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCTTGTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACGACTTCAGCATCCTCTaGCCTCTTGGATATAATTTA | + |
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Preference number: 2 (lower is better) Translates to: LLVRFEWIQNVIQQQMLHDFSIL*PLGYNL Trigger: TAAATTATATCCAAGAGGGCAGAGGATGCTGAAGTC...GTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGACAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
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| 3UTR CAA 90 bp | AACCACCCATTCCCCACTGAAGCTCTGAATTTTCACGTCTTAATTTaGAGATCACCAACTGTCGTTTCATTTCACAATAGTCAATTAAGG | + |
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Preference number: 2 (lower is better) Translates to: NHPFPTEALNFHVLI*RSPTVVSFHNSQLR Trigger: CCTTAATTGACTATTGTGAAATGAAACGACAGTTGGTGATCTCAAAATTAAGACGTGAAAATTCAGAGCTTCAGTGGGGAATGGGTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR-3UTR TCA 90 bp | ACTTTACAGAGTGCCACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGGGAAACATAGTAAAGAGTaGAGGAAAGTTAGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: TLQSATCLDIQVDGFIKGKHSKE*RKVSWV Trigger: CACCCAGCTAACTTTCCTTCACTCTTTACTATGTTT...CCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGTGGCACTCTGTAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR-3UTR GCA 90 bp | ACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGGGAACCAGATGAAACAGGAGTCTAAGGTAGAATaGAGTGATATCTGCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: TCLDIQVDGFIKGNQMKQESKVE*SDICSV Trigger: GACACTGCAGATATCACTGCATTCTACCTTAGACTC...CTGTTTCATCTGGTTCCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR-3UTR CCA 90 bp | ATTAGAAGTCCCATTAAGGAAAATGTGAAAATTGCATATGGATCCACTCTCACCACAAGCATCTGCTCTTaGACTTTCCAGTCACCATTT | + |
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Preference number: 2 (lower is better) Translates to: IRSPIKENVKIAYGSTLTTSICS*TFQSPF Trigger: AAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGT...GGTGAGAGTGGATCCATATGCAATTTTCACATTTTCCTTAATGGGACTTCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTACTGCCTTACTGGAATaGAGGTACAGTTTACAAATA | + |
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Preference number: 2 (lower is better) Translates to: FCLRFSMCGTPFMITINITALLE*RYSLQI Trigger: TATTTGTAAACTGTACCTTCATTCCAGTAAGGCAGT...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGGGAACCAGATGAAACAGAGTGGATACAAAATGTaGTTCAGCAGCAAATGCTAC | + |
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Preference number: 2 (lower is better) Translates to: TCLDIQVDGFIKGNQMKQSGYKM*FSSKCY Trigger: GTAGCATTTGCTGCTGAATCACATTTTGTATCCACT...CTGTTTCATCTGGTTCCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR GCA 72 bp | GCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATaGCGGGACTTTCCAGCTGACAGACCCCAAGTACGG | + |
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Preference number: 3 (lower is better) Translates to: AAQYWVPEVTAE*RDFPADRPQVR Trigger: CCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| 3UTR CCA 72 bp | TTGCAACTGTTAAGGGGGAGCCTGTTCGAGGCGGAGTaGCTGGTACAGTTTTTGGAGGCAGAGGTGGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: LQLLRGSLFEAE*LVQFLEAEVEV Trigger: CACCTCCACCTCTGCCTCCAAAAACTGTACCAGCCACTCCGCCTCGAACAGGCTCCCCCTTAACAGTTGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| 3UTR GCA 72 bp | CACAAGCATCTGCTCTTGGACTTTCCAGTCACCATTTaGACAGGAACAGGCTTTCGAGGCAAGCGGCGTCCC | + |
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Preference number: 3 (lower is better) Translates to: HKHLLLDFPVTI*TGTGFRGKRRP Trigger: GGGACGCCGCTTGCCTCGAAAGCCTGTTCCTGTGCAAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR CCA 72 bp | GCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTaGGGTCAGGTCAGACTTCAGCATCCTCTGCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: AISTFAKRHRRG*GQVRLQHPLPS Trigger: AGAGGGCAGAGGATGCTGAAGTCTGACCTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| 3UTR CCA 72 bp | GTACAGTTTTTGGAGGCAGAGGTGGAGGTGTTCCAGTaGGGAAAGGTCTTGCTAGCTCTGGCGACTCCGTAC | + |
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Preference number: 3 (lower is better) Translates to: VQFLEAEVEVFQ*GKVLLALATPY Trigger: GTACGGAGTCGCCAGAGCTAGCAAGACCTTTCCCCACTGGAACACCTCCACCTCTGCCTCCAAAAACTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| 3UTR GCA 72 bp | AGTAAATACTGCAGAACTGAGCAGCACAGTACTGGGTaGCGGAAGTCACTGCTGAATGCCGGGACTTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: SKYCRTEQHSTG*RKSLLNAGTFQ Trigger: CTGGAAAGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCTGCAGTATTTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| 3UTR-3UTR CAA 90 bp | GATTCAGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAGGACCAGGGGACTATTaGTTTTCCTCCATCCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: DSAANATQANSVGEPQTGGPGDY*FSSILL Trigger: GAGAAGGATGGAGGAAAACAAATAGTCCCCTGGTCC...TCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCTGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
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| 3UTR CCA 72 bp | GCAGGGGCACATCTGCGTTTGCCCATCAGGTATCGCTaGCAGAGCAAAGGTAGATTTGCTTCCTTCAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: AGAHLRLPIRYR*QSKGRFASFKR Trigger: TCTTTTGAAGGAAGCAAATCTACCTTTGCTCTGCCAGCGATACCTGATGGGCAAACGCAGATGTGCCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR-3UTR CAA 90 bp | GATGACACTTTGGGGGAAATGAATCAACCCAAGCCTCAATACCATCGCTGGGAACTTTCCAGTCACCATTaGCACAGGAACAGGCTTTCG | + |
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Preference number: 3 (lower is better) Translates to: DDTLGEMNQPKPQYHRWELSSHH*HRNRLS Trigger: CGAAAGCCTGTTCCTGTGCAAATGGTGACTGGAAAG...TTCCCAGCGATGGTATTGAGGCTTGGGTTGATTCATTTCCCCCAAAGTGTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| 3UTR GCA 72 bp | ACTTTGCAGACTGAGACAGGGGAGAAGTATACACACTaGCGAAATGCACAAGCATCTGCTCTTGGACTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TLQTETGEKYTH*RNAQASALGLS Trigger: GGAAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTATACTTCTCCCCTGTCTCAGTCTGCAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCATCAGGTATCGCTGGCAGAGCAAAGGTAGATTTGCTTCCTTCAAAAGAAGACTGGTCTGCCTAGTCTaGGACCTTGTCTCAGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: PIRYRWQSKGRFASFKRRLVCLV*DLVSEY Trigger: ATATTCTGAGACAAGGTCCAAGACTAGGCAGACCAG...TCTTCTTTTGAAGGAAGCAAATCTACCTTTGCTCTGCCAGCGATACCTGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR-3UTR CAA 90 bp | TACGGTAAATCAGCACAAGAACTTGCAGTGAAATGGAAACTCAACACCGATACTTGGCTGGTACAGTTTTaGGAGGCAGAGGTGGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: YGKSAQELAVKWKLNTDTWLVQF*EAEVEV Trigger: CACCTCCACCTCTGCCTCCAAAAACTGTACCAGCCA...AGTATCGGTGTTGAGTTTCCATTTCACTGCAAGTTCTTGTGCTGATTTACCGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| 3UTR TCA 72 bp | GGGTTCATCGGTTGGCCTGAACCCCATATCTCAGGCTaGTCTAAAAGAACTTCCGTCTTCTGCTCATCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GFIGWPEPHISG*SKRTSVFCSSK Trigger: TTTTGATGAGCAGAAGACGGAAGTTCTTTTAGATCAGCCTGAGATATGGGGTTCAGGCCAACCGATGAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| 3UTR GCA 72 bp | GGAGAAGTATACACACTGCCGAAATGCACAAGCATCTaGTCTTGGACTTTCCAGTCACCATTTGCACAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GEVYTLPKCTSI*SWTFQSPFAQE Trigger: TTCCTGTGCAAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTATACTTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCAGGACCAGGGGACTATTaGTTTTCCTCCATCCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPGPGDY*FSSILL Trigger: GAGAAGGATGGAGGAAAACAAATAGTCCCCTGGTCC...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| 3UTR-3UTR CAA 90 bp | TACACACTGCCGAAATGCACAAGCATCTGCTCTTGGACTTTCCAGTCACCATTTGCTAACCCATTTTGTTaGGACAAAAGGGAACCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: YTLPKCTSICSWTFQSPFANPFC*DKREPD Trigger: GTCAGGTTCCCTTTTGTCCAAACAAAATGGGTTAGC...AAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR-3UTR CAA 90 bp | GATGACACTTTGGGGGAAATGAATCAACCCAAGCCTCAATACCATCGCTGGGAAAGGCTTTTTGCCATTTaGGAGTCTAAGGTAGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: DDTLGEMNQPKPQYHRWERLFAI*ESKVEC Trigger: GCATTCTACCTTAGACTCCAAAATGGCAAAAAGCCT...TTCCCAGCGATGGTATTGAGGCTTGGGTTGATTCATTTCCCCCAAAGTGTCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR TCA 72 bp | AGGTCATTACTAGCTGTGATGACACTTTGGGGGAAATaGATCAACCCAAGCCTCAATACCATCGCTGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSLLAVMTLWGK*INPSLNTIAGK Trigger: TTTCCCAGCGATGGTATTGAGGCTTGGGTTGATTCATTTCCCCCAAAGTGTCATCACAGCTAGTAATGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR CCA 72 bp | GTGATTCAGCAGCAAATGCTACACAGGCCAACTCAGTaGGAGAGCCCCAAACAGGAACTTTTCTGTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VIQQQMLHRPTQ*ESPKQELFCLK Trigger: TTTTAAACAGAAAAGTTCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCTGAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| 3UTR CCA 72 bp | GCCGTCGGTGGATCTCAGAGAGTTTCAGATAAGCAGTaGCAAGTCCCCATTATGATAAAATGGAAACTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: AVGGSQRVSDKQ*QVPIMIKWKLV Trigger: AACTAGTTTCCATTTTATCATAATGGGGACTTGCCACTGCTTATCTGAAACTCTCTGAGATCCACCGACGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR CCA 72 bp | AATCATTTACATATTGTGATGCAATGTTTCAGGGTCTaGAGAAGCCCCTTCCCTGCTTGGCAACATTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NHLHIVMQCFRV*RSPFPAWQHSA Trigger: AGCAGAATGTTGCCAAGCAGGGAAGGGGCTTCTCCAGACCCTGAAACATTGCATCACAATATGTAAATGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR TCA 72 bp | AAGCTTAAAACCAAACAGCACCAACATCTCCATCTCTaGAATGAGCAACTGTTGTTATCTGAACTGGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLKTKQHQHLHL*NEQLLLSELEG Trigger: TCCTTCCAGTTCAGATAACAACAGTTGCTCATTTCAGAGATGGAGATGTTGGTGCTGTTTGGTTTTAAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR TCA 72 bp | GTATACCTTACGGTAAATCAGCACAAGAACTTGCAGTaGAATGGAAACTCAACACCGATACTGTGTGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VYLTVNQHKNLQ*NGNSTPILCGF Trigger: AAAACCACACAGTATCGGTGTTGAGTTTCCATTTCACTGCAAGTTCTTGTGCTGATTTACCGTAAGGTATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR GCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTCTATGCGCAGGTCAGTaGTCGCAGGCTCACAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTLCAGQ*SQAHSA Trigger: GGCGCTGTGAGCCTGCGAGCACTGACCTGCGCATAG...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTGGAACTGCACGTTGTTaGGGGCCACTGCAGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTGTARC*GPLQWT Trigger: TGTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCC...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTTGGGGGAGGTGGAGTTaGTCTCTGTCCCAACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTWGRWS*SLSQPT Trigger: TGTGGGTTGGGACAGAGAGCAACTCCACCTCCCCCA...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GCTAGCTCTGGCGACTCCGTACTTGGGTTCATCGGTTGGCCTGAACCCCATATCTTTGCTATGGTAGGGTaGCTCGTGTGGGCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASSGDSVLGFIGWPEPHIFAMVG*LVWAGL Trigger: CAGCCCAGCCCACACGAGCCACCCTACCATAGCAAA...GATATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGAGCTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR GCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTGCGCACACTCTGCTTTaGTATGGTAGGGTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTAHTLL*YGRVAR Trigger: ACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGC...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GCTAGCTCTGGCGACTCCGTACTTGGGTTCATCGGTTGGCCTGAACCCCATATCGCGCACACTCTGCTTTaGTATGGTAGGGTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSGDSVLGFIGWPEPHIAHTLL*YGRVAR Trigger: ACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGC...GATATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGAGCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR GCA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCTATGCGCAGGTCAGTaGTCGCAGGCTCACAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CDDLAISTFAKRHRRGWGLCAGQ*SQAHSA Trigger: GGCGCTGTGAGCCTGCGAGCACTGACCTGCGCATAG...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAGGCCCTGGGGGACCTaGGGAGCCTGTGGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPRPWGT*GACGAR Trigger: CCTGGCCCCACAGGCTCCGCAGGTCCCCCAGGGCCT...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GATTCAGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAAGCGGAGATGGTACATaGCGAGGACCAGGAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSAANATQANSVGEPQTGSGDGT*RGPGGP Trigger: AGGGCCTCCTGGTCCTCGCCATGTACCATCTCCGCT...TCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCTGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | GATTCAGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAGGAACTGCACGTTGTTaGGGGCCACTGCAGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: DSAANATQANSVGEPQTGGTARC*GPLQWT Trigger: TGTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCC...TCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCGTGGAGGCGGAGTGGTaGTGCAAGGAACTAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQAVEAEW*CKELRG Trigger: CCCCCTTAGTTCCTTGCAGCACCACTCCGCCTCCAC...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTTTCTGTGAAAGCTGCTaGGACCGGGAGGGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVFCESC*DREGVL Trigger: CAGGACACCCTCCCGGTCGCAGCAGCTTTCACAGAA...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACAGGCCCTGGGGGACCTaGGGAGCCTGTGGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNRPWGT*GACGAR Trigger: CCTGGCCCCACAGGCTCCGCAGGTCCCCCAGGGCCT...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTTGTAAGTTCTGGAGTTaGGGTGGAACGCCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTCKFWS*GGTPGS Trigger: AGACCCAGGCGTTCCACCCCAACTCCAGAACTTACA...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAAAGGCCGGGGAGGAGGTaGAGGCGGAGTGGTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKRPGRR*RRSGAA Trigger: TGCAGCACCACTCCGCCTCCACCTCCTCCCCGGCCT...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTGGAGGAGTGTATGGGTaGGCTAAAAGGTCTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTGGVYG*AKRSGH Trigger: GTGTCCAGACCTTTTAGCCCACCCATACACTCCTCC...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GATTCAGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGATCACAGCAGAGAAGTTaGGGGTTCGGCAGGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSAANATQANSVGEPQTGSQQRS*GFGRTC Trigger: GCACGTCCTGCCGAACCCCCAACTTCTCTGCTGTGA...TCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGCGGAGATGGTACATaGCGAGGACCAGGAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQASGDGT*RGPGGP Trigger: AGGGCCTCCTGGTCCTCGCCATGTACCATCTCCGCT...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GATTCAGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGATGGTGGTGGGGGAGGTaGAGTTGCTCTCTGTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSAANATQANSVGEPQTGWWWGR*SCSLSQ Trigger: TTGGGACAGAGAGCAACTCCACCTCCCCCACCACCA...TCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCTGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR CAA 72 bp | GCACAAGCATCTGCTCTTGGACTTTCCAGTCACCATTaGCACAGGAACAGGCTTTCGAGGCAAGCGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AQASALGLSSHH*HRNRLSRQAAS Trigger: GGACGCCGCTTGCCTCGAAAGCCTGTTCCTGTGCAAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR CAA 72 bp | TGGGGAAAGGTCTTGCTAGCTCTGGCGACTCCGTACTaGGGTTCATCGGTTGGCCTGAACCCCATATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WGKVLLALATPY*GSSVGLNPISQ Trigger: CTGAGATATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGAGCTAGCAAGACCTTTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR TCA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTGGAACTGCACGTTGTTaGGGGCCACTGCAGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: CDDLAISTFAKRHRRGWGGTARC*GPLQWT Trigger: TGTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCC...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCTTCTGTGAAAGCTGCTaGGACCGGGAGGGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQAFCESC*DREGVL Trigger: CAGGACACCCTCCCGGTCGCAGCAGCTTTCACAGAA...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTCTTGGGTTCATCGGTTaGCCTGAACCCCATATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTLGFIG*PEPHIS Trigger: TGAGATATGGGGTTCAGGCCAACCGATGAACCCAAG...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTAAGGAACTAAGGGGGTaGCTGGTCGAGCAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVKELRG*LVEQEK Trigger: CTTCTCCTGCTCGACCAGCCACCCCCTTAGTTCCTT...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAGGCCGGGGAGGAGGTaGAGGCGGAGTGGTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPRPGRR*RRSGAA Trigger: TGCAGCACCACTCCGCCTCCACCTCCTCCCCGGCCT...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTGAAAGTCAGAGCTGCTaGGGATGGGTTGTTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTESQSC*GWVVGK Trigger: TTTGCCAACAACCCATCCCCAGCAGCTCTGACTTTC...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTTCACTCCTCCGTCTATaGGGACCAGGAACTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVSLLRL*GPGTAR Trigger: ACGTGCAGTTCCTGGTCCCCATAGACGGAGGAGTGA...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCTGGTGGTGGGGGAGGTaGAGTTGCTCTCTGTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQAWWWGR*SCSLSQ Trigger: TTGGGACAGAGAGCAACTCCACCTCCCCCACCACCA...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| 3UTR CAA 72 bp | TTAGCACAGCCTGCACTTTCCAACATCAAGGGCACGTaGCAGTCCAAGGCCGTGGCTGTGTTTGCCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: LAQPALSNIKGT*QSKAVAVFATS Trigger: TGATGTGGCAAACACAGCCACGGCCTTGGACTGCAACGTGCCCTTGATGTTGGAAAGTGCAGGCTGTGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR TCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTTGCGATGTTGCCTATTaGAGCCTTCAGCTCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTCDVAY*SLQLIY Trigger: GTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCA...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGCGACTCCGTACTTGGGTTCATCGGTTGGCCTGAACCCCATATCTCAGGCTGCGATGTTGCCTATTaGAGCCTTCAGCTCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SGDSVLGFIGWPEPHISGCDVAY*SLQLIY Trigger: GTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCA...GCCTGAGATATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR TCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCCCTGGGCAGACACCTaGTATTTGAGCATGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVPWADT*YLSMST Trigger: TGTGGACATGCTCAAATATCAGGTGTCTGCCCAGGG...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTTACTTCCTTCACTCGTaGACTGCACAACCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CDDLAISTFAKRHRRGWGYFLHS*TAQPAG Trigger: CCCCGCTGGTTGTGCAGTTCACGAGTGAAGGAAGTA...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCTACTTCCTTCACTCGTaGACTGCACAACCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQAYFLHS*TAQPAG Trigger: CCCCGCTGGTTGTGCAGTTCACGAGTGAAGGAAGTA...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTTGCTGTCCAGGTCACTaGTGGATGGTAGTTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTCCPGH*WMVVSQ Trigger: TTGAGAAACTACCATCCATCAGTGACCTGGACAGCA...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGGAGAAGTATACACACTGCCGAAATGCACAAGCATCTGCTCTTGGACTTTGTCAGCTGGGATGTCTaGTGCAGCTGGTGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGRSIHTAEMHKHLLLDFVSWDV*CSWWGH Trigger: GTGACCCCACCAGCTGCATCAGACATCCCAGCTGAC...AAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTATACTTCTCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCGCGCACACTCTGCTTTaGTATGGTAGGGTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQAAHTLL*YGRVAR Trigger: ACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGC...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGTTCCCGCGCACACTCTaGTTTGCTATGGTAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DDLAISTFAKRHRRGWGQFPRTL*FAMVGW Trigger: CCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAA...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCTTCCCGCGCACACTCTaGTTTGCTATGGTAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQAFPRTL*FAMVGW Trigger: CCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAA...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTGGGTTCGGCAGGACGTaGTCTAACCTGCTGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVGFGRT*SNLLEF Trigger: AAATTCCAGCAGGTTAGAGCACGTCCTGCCGAACCC...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGATGGGGACCAGGAACTaGACGTTGTTGAGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DDLAISTFAKRHRRGWGQMGTRN*TLLRAT Trigger: AGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCCAT...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTATGGGGACCAGGAACTaGACGTTGTTGAGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: CDDLAISTFAKRHRRGWGMGTRN*TLLRAT Trigger: AGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCCAT...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACATGGTCCCCGTACCACTaGCCGAGCCAGGTCCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTWSPYH*PSQVRG Trigger: CCCCCGGACCTGGCTCGGGCAGTGGTACGGGGACCA...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GATTCAGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGATGTAAGTTCTGGAGTTaGGGTGGAACGCCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSAANATQANSVGEPQTGCKFWS*GGTPGS Trigger: AGACCCAGGCGTTCCACCCCAACTCCAGAACTTACA...TCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCTGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAACTTTTCGAGGCGGAGTGGCTaGTACAGTTTTTGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSKCYTGQLSGRAPNRNFSRRSG*YSFWRQ Trigger: CTGCCTCCAAAAACTGTACCAGCCACTCCGCCTCGA...AAAGTTCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGAAGGCCGGGGAGGAGGTaGAGGCGGAGTGGTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGRPGRR*RRSGAA Trigger: TGCAGCACCACTCCGCCTCCACCTCCTCCCCGGCCT...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGAACCAACTGTGGGAGTaGTGGCTGCGCTCAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DDLAISTFAKRHRRGWGQNQLWE*WLRSVS Trigger: ACTCACTGAGCGCAGCCACCACTCCCACAGTTGGTT...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072481.12 ENSMUST00000080728.13 |
||
| CDS-3UTR CCA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCCAAGTTCAGAGGTGTaGACTGAATGCCCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CDDLAISTFAKRHRRGWGPSSEV*TECPGQ Trigger: CTGCCCAGGGCATTCAGTCCACACCTCTGAACTTGG...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCTCACTCCTCCGTCTATaGGGACCAGGAACTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQASLLRL*GPGTAR Trigger: ACGTGCAGTTCCTGGTCCCCATAGACGGAGGAGTGA...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCGCACAGCCTGAAGCTTaGTCACTCCTCCGTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQAAQPEA*SLLRLW Trigger: CCATAGACGGAGGAGTGACCAAGCTTCAGGCTGTGC...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GATTCAGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAGTTCATTCTCAACTGTaGGAGTGGTGGCTGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSAANATQANSVGEPQTGVHSQL*EWWLRS Trigger: TGAGCGCAGCCACCACTCCCACAGTTGAGAATGAAC...TCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCTGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066824.14 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GATGACACTTTGGGGGAAATGAATCAACCCAAGCCTCAATACCATCGCTGGGAAGTGGCTCGTGTGGGCTaGGCTGCATTCCATCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: DDTLGEMNQPKPQYHRWEVARVG*AAFHLG Trigger: ACCGAGATGGAATGCAGCCCAGCCCACACGAGCCAC...TTCCCAGCGATGGTATTGAGGCTTGGGTTGATTCATTTCCCCCAAAGTGTCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCTTGGGCGACAACACTaGCCCAAAAATGCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVLGRQH*PKNAVQ Trigger: CTGGACAGCATTTTTGGGCCAGTGTTGTCGCCCAAG...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCCCTGGGCAGACACCTaGTATTTGAGCATGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CDDLAISTFAKRHRRGWGPWADT*YLSMST Trigger: TGTGGACATGCTCAAATATCAGGTGTCTGCCCAGGG...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCACTATGCGCAGGTCAGTaGTCGCAGGCTCACAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPLCAGQ*SQAHSA Trigger: GGCGCTGTGAGCCTGCGAGCACTGACCTGCGCATAG...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCTTCAGCATTCCAGACTaGTGGAGGAAGCACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQAFSIPD*WRKHSL Trigger: CAGGCTGTGCTTCCTCCAGCAGTCTGGAATGCTGAA...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCTTGGGGTGGAACGCCTaGGTCTTGCAACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQALGWNA*VLQLLH Trigger: GTGAAGAAGTTGCAAGACCCAGGCGTTCCACCCCAA...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCTTGCTTGTAAGTTCTaGAGTTGGGGTGGAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVLACKF*SWGGTP Trigger: AGGCGTTCCACCCCAACTCCAGAACTTACAAGCAAG...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCCTGTTCGAGGCGGAGTaGCTGGTACAGTTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQALFEAE*LVQFLE Trigger: CTCCAAAAACTGTACCAGCCACTCCGCCTCGAACAG...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAAGGCCGGGGAGGAGGTaGAGGCGGAGTGGTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTRPGRR*RRSGAA Trigger: TGCAGCACCACTCCGCCTCCACCTCCTCCCCGGCCT...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAACTTTGGAGGAGTGTATGGGTaGGCTAAAAGGTCTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SSKCYTGQLSGRAPNRNFGGVYG*AKRSGH Trigger: GTGTCCAGACCTTTTAGCCCACCCATACACTCCTCC...AAAGTTCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAACTTTCAGAGCTGCTGGGGATaGGTTGTTGGCAAAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSKCYTGQLSGRAPNRNFQSCWG*VVGKVS Trigger: AGACACTTTGCCAACAACCCATCCCCAGCAGCTCTG...AAAGTTCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GATGACACTTTGGGGGAAATGAATCAACCCAAGCCTCAATACCATCGCTGGGAATCACAGCAGAGAAGTTaGGGGTTCGGCAGGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DDTLGEMNQPKPQYHRWESQQRS*GFGRTC Trigger: GCACGTCCTGCCGAACCCCCAACTTCTCTGCTGTGA...TTCCCAGCGATGGTATTGAGGCTTGGGTTGATTCATTTCCCCCAAAGTGTCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCGTAAAGATTCTAGTTTACCTGTTGCAACTGTTAAGGGGGAGCCTGTTGTGGCTCGTGTGGGCTaGGCTGCATTCCATCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSRKDSSLPVATVKGEPVVARVG*AAFHLG Trigger: ACCGAGATGGAATGCAGCCCAGCCCACACGAGCCAC...AACAGGCTCCCCCTTAACAGTTGCAACAGGTAAACTAGAATCTTTACGGCTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCCTTGGAGTCAACTCTaGAGTAACATGTTCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVPWSQL*SNMFRG Trigger: TCCCCGGAACATGTTACTCCAGAGTTGACTCCAAGG...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATGACCTGCGGAGCCTGTaGGGCCAGGTGGGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYDLRSL*GQVGLE Trigger: CTCCAGCCCCACCTGGCCCCACAGGCTCCGCAGGTC...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCCCCATATCTCAGGCTaGTCTAAAAGAACTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVPHISG*SKRTSV Trigger: GACGGAAGTTCTTTTAGATCAGCCTGAGATATGGGG...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTGGGAAAGTGCGATGTTaGCTATTGAAGCCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVGKVRC*LLKPSA Trigger: AGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCC...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCGTGGAGGCGGAGTGGTaGTGCAAGGAACTAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSVEAEW*CKELRG Trigger: CCCCCTTAGTTCCTTGCAGCACCACTCCGCCTCCAC...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACCTATGCGCAGGTCAGTaGTCGCAGGCTCACAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNLCAGQ*SQAHSA Trigger: GGCGCTGTGAGCCTGCGAGCACTGACCTGCGCATAG...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAACTTTCTTGCTTGTAAGTTCTaGAGTTGGGGTGGAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSKCYTGQLSGRAPNRNFLACKF*SWGGTP Trigger: AGGCGTTCCACCCCAACTCCAGAACTTACAAGCAAG...AAAGTTCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
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| CDS-3UTR CCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCCTTGCTTGTAAGTTCTaGAGTTGGGGTGGAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQALACKF*SWGGTP Trigger: AGGCGTTCCACCCCAACTCCAGAACTTACAAGCAAG...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCTTGGGTTCATCGGTTaGCCTGAACCCCATATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CDDLAISTFAKRHRRGWGLGFIG*PEPHIS Trigger: TGAGATATGGGGTTCAGGCCAACCGATGAACCCAAG...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR CCA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGCGTGCTCTAACCTGCTaGAATTTACCACCCGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DDLAISTFAKRHRRGWGQRALTC*NLPPGK Trigger: CTTTCCGGGTGGTAAATTCCAGCAGGTTAGAGCACG...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTCCATTTTCTGACTTCTaGGAGATATCGGGAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTPFSDF*EISGIF Trigger: GAAGATTCCCGATATCTCCCAGAAGTCAGAAAATGG...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TACACACTGCCGAAATGCACAAGCATCTGCTCTTGGACTTTCCAGTCACCATTTTTTGCTATGGTAGGGTaGCTCGTGTGGGCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTLPKCTSICSWTFQSPFFAMVG*LVWAGL Trigger: CAGCCCAGCCCACACGAGCCACCCTACCATAGCAAA...AAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCCTTGGAGTCAACTCTaGAGTAACATGTTCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CDDLAISTFAKRHRRGWGPWSQL*SNMFRG Trigger: TCCCCGGAACATGTTACTCCAGAGTTGACTCCAAGG...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | TTTATCAAAGGGAACCAGATGAAACAGCAAGGTACTCATTCTATTGTCAGGATAGACCTGCGGAGCCTGTaGGGCCAGGTGGGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIKGNQMKQQGTHSIVRIDLRSL*GQVGLE Trigger: CTCCAGCCCCACCTGGCCCCACAGGCTCCGCAGGTC...TATCCTGACAATAGAATGAGTACCTTGCTGTTTCATCTGGTTCCCTTTGATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCCCCCATATCTCAGGCTaGTCTAAAAGAACTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQAPHISG*SKRTSV Trigger: GACGGAAGTTCTTTTAGATCAGCCTGAGATATGGGG...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR TCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACGGAGGAAGCACAGCCTaGAGCTTGGTCACTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNGGSTA*SLVTPP Trigger: CGGAGGAGTGACCAAGCTTCAGGCTGTGCTTCCTCC...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGAGTCAGCTGGGATGTCTaGTGCAGCTGGTGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGVSWDV*CSWWGH Trigger: GTGACCCCACCAGCTGCATCAGACATCCCAGCTGAC...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR GCA 90 bp | CTAGCTCTGGCGACTCCGTACTTGGGTTCATCGGTTGGCCTGAACCCCATATCTCATTTGGTGCCCCATTaGTTTTCTTCGAAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LALATPYLGSSVGLNPISHLVPH*FSSKLS Trigger: AGAAAGCTTCGAAGAAAAGCAATGGGGCACCAAATG...AGATATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGAGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR GCA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTAGGACGTCCTTAGATTaGAAGGGTTTAATCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTRTSLD*KGLILM Trigger: CATCAAGATTAAACCCTTGCAATCTAAGGACGTCCT...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR GCA 90 bp | GCTAGCTCTGGCGACTCCGTACTTGGGTTCATCGGTTGGCCTGAACCCCATATCAGGACGTCCTTAGATTaGAAGGGTTTAATCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ASSGDSVLGFIGWPEPHIRTSLD*KGLILM Trigger: CATCAAGATTAAACCCTTGCAATCTAAGGACGTCCT...GATATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGAGCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAACTTTGGGAAAGTGCGATGTTaGCTATTGAAGCCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSKCYTGQLSGRAPNRNFGKVRC*LLKPSA Trigger: AGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCC...AAAGTTCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
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| CDS-3UTR GCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCAGTGGAGGCGGAGTGGTaGTGCAAGGAACTAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPVEAEW*CKELRG Trigger: CCCCCTTAGTTCCTTGCAGCACCACTCCGCCTCCAC...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
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| CDS-3UTR GCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCGTGTGGGCTGGGCTaGATTCCATCTCGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGSCGLG*IPSRSG Trigger: GCCAGACCGAGATGGAATGCAGCCCAGCCCACACGA...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCTGGGGGAGGTGGAGTTaGTCTCTGTCCCAACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSWGRWS*SLSQPT Trigger: TGTGGGTTGGGACAGAGAGCAACTCCACCTCCCCCA...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR GCA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTATGGTCCCCGTACCACTaGCCGAGCCAGGTCCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCISVSIVPFNSTTIKLLWSPYH*PSQVRG Trigger: CCCCCGGACCTGGCTCGGGCAGTGGTACGGGGACCA...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR CCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAAAAGGAACTAAGGGGGTaGCTGGTCGAGCAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKKELRG*LVEQEK Trigger: CTTCTCCTGCTCGACCAGCCACCCCCTTAGTTCCTT...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAGAGGTGGAGGCGGAGTaGTGCTGCAAGGAACTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPEVEAE*CCKELR Trigger: CCTTAGTTCCTTGCAGCACCACTCCGCCTCCACCTC...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | AGACTTTACAGAGTGCCACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGAGGCCGGGGAGGAGGTaGAGGCGGAGTGGTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLYRVPLVLTFKLMVLSKRPGRR*RRSGAA Trigger: TGCAGCACCACTCCGCCTCCACCTCCTCCCCGGCCT...CTTTGATAAAACCATCAACTTGAATGTCAAGACAAGTGGCACTCTGTAAAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| CDS-3UTR CCA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCGGGAGGAACCAACTGTaGGAGTGGTGGCTGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CVHQARLKHVSQTTVLQGGRNQL*EWWLRS Trigger: TGAGCGCAGCCACCACTCCCACAGTTGGTTCCTCCC...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072481.12 ENSMUST00000080728.13 |
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| CDS-3UTR CCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCATCACAGCAGAGAAGTTaGGGGTTCGGCAGGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPSQQRS*GFGRTC Trigger: GCACGTCCTGCCGAACCCCCAACTTCTCTGCTGTGA...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGAAGTCCTGTAGGTGGGTaGTGGTGGGGGAGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGSPVGG*WWGRWS Trigger: ACTCCACCTCCCCCACCACCACCCACCTACAGGACT...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR CCA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCAGTCCTGTAGGTGGGTaGTGGTGGGGGAGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVHQARLKHVSQTTVLQGSPVGG*WWGRWS Trigger: ACTCCACCTCCCCCACCACCACCCACCTACAGGACT...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR CCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAAACACAACTGTGGGAGTaGTGGCTGCGCTCAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKTQLWE*WLRSVS Trigger: ACTCACTGAGCGCAGCCACCACTCCCACAGTTGTGT...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149547.2 |
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| CDS-3UTR TCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAGTTCATCGGTTGGCCTaGACCCCATATCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPVHRLA*TPYLRL Trigger: CAGCCTGAGATATGGGGTTCAGGCCAACCGATGAAC...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR TCA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCGTTCATCGGTTGGCCTaGACCCCATATCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSVHRLA*TPYLRL Trigger: CAGCCTGAGATATGGGGTTCAGGCCAACCGATGAAC...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR TCA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCGGAACTGCACGTTGTTaGGGGCCACTGCAGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: CVHQARLKHVSQTTVLQGGTARC*GPLQWT Trigger: TGTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCC...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCAGGAACTGCACGTTGTTaGGGGCCACTGCAGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPGTARC*GPLQWT Trigger: TGTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCC...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAGGAGGAAGCACAGCCTaGAGCTTGGTCACTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTGGSTA*SLVTPP Trigger: CGGAGGAGTGACCAAGCTTCAGGCTGTGCTTCCTCC...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCATTCCCGCGCACACTCTaGTTTGCTATGGTAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPFPRTL*FAMVGW Trigger: CCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAA...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCTTCCCGCGCACACTCTaGTTTGCTATGGTAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSFPRTL*FAMVGW Trigger: CCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAA...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | TCTGGCGACTCCGTACTTGGGTTCATCGGTTGGCCTGAACCCCATATCTCAGGCATAAAATCCATTTGGTaGCCCATTGCTTTTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SGDSVLGFIGWPEPHISGIKSIW*PIAFLR Trigger: TCGAAGAAAAGCAATGGGGCACCAAATGGATTTTAT...GCCTGAGATATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR GCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATTCTGTGAAAGCTGCTaGGACCGGGAGGGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGFCESC*DREGVL Trigger: CAGGACACCCTCCCGGTCGCAGCAGCTTTCACAGAA...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCATGGGGACCAGGAACTaGACGTTGTTGAGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSMGTRN*TLLRAT Trigger: AGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCCAT...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | TACGGTAAATCAGCACAAGAACTTGCAGTGAAATGGAAACTCAACACCGATACTTCGTGTGGGCTGGGCTaGATTCCATCTCGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YGKSAQELAVKWKLNTDTSCGLG*IPSRSG Trigger: GCCAGACCGAGATGGAATGCAGCCCAGCCCACACGA...AGTATCGGTGTTGAGTTTCCATTTCACTGCAAGTTCTTGTGCTGATTTACCGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCATTTGCTATGGTAGGGTaGCTCGTGTGGGCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPFAMVG*LVWAGH Trigger: ATGCCCAGCCCACACGAGCCACCCTACCATAGCAAA...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 |
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| CDS-3UTR CCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGAGAGGTGGAGGCGGAGTaGTGCTGCAAGGAACTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGEVEAE*CCKELR Trigger: CCTTAGTTCCTTGCAGCACCACTCCGCCTCCACCTC...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAAGGAGGAGTGTATGGGTaGGCTAAAAGGTCTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKGGVYG*AKRSGH Trigger: GTGTCCAGACCTTTTAGCCCACCCATACACTCCTCC...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAACCAACTGTGGGAGTaGTGGCTGCGCTCAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPNQLWE*WLRSVS Trigger: ACTCACTGAGCGCAGCCACCACTCCCACAGTTGGTT...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072481.12 ENSMUST00000080728.13 |
||
| CDS-3UTR CCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACAGAGCTGCTGGGGATaGGTTGTTGGCAAAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKQSCWG*VVGKVS Trigger: AGACACTTTGCCAACAACCCATCCCCAGCAGCTCTG...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCCCAAGTTCAGAGGTGTaGACTGAATGCCCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSPSSEV*TECPGQ Trigger: CTGCCCAGGGCATTCAGTCCACACCTCTGAACTTGG...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCGCACAGCCTGAAGCTTaGTCACTCCTCCGTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSAQPEA*SLLRLW Trigger: CCATAGACGGAGGAGTGACCAAGCTTCAGGCTGTGC...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAAGTTCATTCTCAACTGTaGGAGTGGTGGCTGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKVHSQL*EWWLRS Trigger: TGAGCGCAGCCACCACTCCCACAGTTGAGAATGAAC...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066824.14 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAAGCCTCTGTGGCTGCCTaGTCATTTCCTGTTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKASVAA*SFPVAT Trigger: AGTTGCAACAGGAAATGACCAGGCAGCCACAGAGGC...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| 3UTR CAA 72 bp | CATCATTTCAGAGCCGTAAAGATTCTAGTTTACCTGTaGCAACTGTTAAGGGGGAGCCTGTTCGAGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HHFRAVKILVYL*QLLRGSLFEAE Trigger: CTCCGCCTCGAACAGGCTCCCCCTTAACAGTTGCAACAGGTAAACTAGAATCTTTACGGCTCTGAAATGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| CDS-3UTR TCA 90 bp | GATGACACTTTGGGGGAAATGAATCAACCCAAGCCTCAATACCATCGCTGGGAATGCGATGTTGCCTATTaGAGCCTTCAGCTCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: DDTLGEMNQPKPQYHRWECDVAY*SLQLIY Trigger: GTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCA...TTCCCAGCGATGGTATTGAGGCTTGGGTTGATTCATTTCCCCCAAAGTGTCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCATGGCAAAGTGTCTGGTaGTACCAGCAGGGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPWQSVW*YQQGRT Trigger: TGTCCTTCCCTGCTGGTATCACCAGACACTTTGCCA...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR TCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTGAGACTTTCTTTAGGTaGGTCATCAAATTTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVETFFR*VIKFGM Trigger: CATGCCAAATTTGATGACTCACCTAAAGAAAGTCTC...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR TCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAATACGCCTCCATTTTCTaGCTTCTGGGAGATATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKYASIF*LLGDIG Trigger: CCCGATATCTCCCAGAAGTCAGAAAATGGAGGCGTA...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGGAGAAGTATACACACTGCCGAAATGCACAAGCATCTGCTCTTGGACTTTGGACTTCTTCTAAATTaGGCGGAGATGGTACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGRSIHTAEMHKHLLLDFGLLLN*AEMVHG Trigger: GCCATGTACCATCTCCGCTCAATTTAGAAGAAGTCC...AAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTATACTTCTCCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| CDS-3UTR GCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGAGCGCACACTCTGCTTTaGTATGGTAGGGTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGAHTLL*YGRVAR Trigger: ACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGC...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | CCTTACGGTAAATCAGCACAAGAACTTGCAGTGAAATGGAAACTCAACACCGATTTCCCGCGCACACTCTaGTTTGCTATGGTAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PYGKSAQELAVKWKLNTDFPRTL*FAMVGW Trigger: CCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAA...ATCGGTGTTGAGTTTCCATTTCACTGCAAGTTCTTGTGCTGATTTACCGTAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| CDS-3UTR GCA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCATTTGGTGCCCCATTaGTTTTCTTCGAAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CDDLAISTFAKRHRRGWGHLVPH*FSSKLS Trigger: AGAAAGCTTCGAAGAAAAGCAATGGGGCACCAAATG...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR GCA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGCATTTGGTGCCCCATTaGTTTTCTTCGAAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DDLAISTFAKRHRRGWGQHLVPH*FSSKLS Trigger: AGAAAGCTTCGAAGAAAAGCAATGGGGCACCAAATG...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR GCA 90 bp | CAGGGGAGAAGTATACACACTGCCGAAATGCACAAGCATCTGCTCTTGGACTTTGGGAAAGTGCGATGTTaGCTATTGAAGCCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGRSIHTAEMHKHLLLDFGKVRC*LLKPSA Trigger: AGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCC...AAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTATACTTCTCCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| CDS-3UTR GCA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGAGAACTTCCGTCTTCTaGTCATCAAAAGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: DDLAISTFAKRHRRGWGQRTSVF*SSKADS Trigger: AGAGTCAGCTTTTGATGAGCAGAAGACGGAAGTTCT...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR GCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAGGGTTCGGCAGGACGTaGTCTAACCTGCTGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPGFGRT*SNLLEF Trigger: AAATTCCAGCAGGTTAGAGCACGTCCTGCCGAACCC...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR GCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGAATGGGGACCAGGAACTaGACGTTGTTGAGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGMGTRN*TLLRAT Trigger: AGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCCAT...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR GCA 90 bp | GGTAAATCAGCACAAGAACTTGCAGTGAAATGGAAACTCAACACCGATACTGTGGGAACGCCTGGGTCTTaGAACTTCTTCACCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKSAQELAVKWKLNTDTVGTPGS*NFFTTG Trigger: GCCTGTGGTGAAGAAGTTGCAAGACCCAGGCGTTCC...CACAGTATCGGTGTTGAGTTTCCATTTCACTGCAAGTTCTTGTGCTGATTTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| CDS-3UTR CCA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCTTGGGGTGGAACGCCTaGGTCTTGCAACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSLGWNA*VLQLLH Trigger: GTGAAGAAGTTGCAAGACCCAGGCGTTCCACCCCAA...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | TACACACTGCCGAAATGCACAAGCATCTGCTCTTGGACTTTCCAGTCACCATTTCTTGCTTGTAAGTTCTaGAGTTGGGGTGGAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YTLPKCTSICSWTFQSPFLACKF*SWGGTP Trigger: AGGCGTTCCACCCCAACTCCAGAACTTACAAGCAAG...AAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| CDS-3UTR CCA 90 bp | CAGAGCCGTAAAGATTCTAGTTTACCTGTTGCAACTGTTAAGGGGGAGCCTGTTCTTGCTTGTAAGTTCTaGAGTTGGGGTGGAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSRKDSSLPVATVKGEPVLACKF*SWGGTP Trigger: AGGCGTTCCACCCCAACTCCAGAACTTACAAGCAAG...AACAGGCTCCCCCTTAACAGTTGCAACAGGTAAACTAGAATCTTTACGGCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| CDS-3UTR CCA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCTCGAGGCGGAGTGGCTaGTACAGTTTTTGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVHQARLKHVSQTTVLQGSRRSG*YSFWRQ Trigger: CTGCCTCCAAAAACTGTACCAGCCACTCCGCCTCGA...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTCGAGGCGGAGTGGCTaGTACAGTTTTTGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNSRRSG*YSFWRQ Trigger: CTGCCTCCAAAAACTGTACCAGCCACTCCGCCTCGA...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACAAGGAACTAAGGGGGTaGCTGGTCGAGCAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNKELRG*LVEQEK Trigger: CTTCTCCTGCTCGACCAGCCACCCCCTTAGTTCCTT...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTGAGGTGGAGGCGGAGTaGTGCTGCAAGGAACTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPEVEAE*CCKELR Trigger: CCTTAGTTCCTTGCAGCACCACTCCGCCTCCACCTC...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAGAGGTGGAGGCGGAGTaGTGCTGCAAGGAACTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTEVEAE*CCKELR Trigger: CCTTAGTTCCTTGCAGCACCACTCCGCCTCCACCTC...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTGGGAGGAACCAACTGTaGGAGTGGTGGCTGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FCLRFSMCGTPFMITINIGRNQL*EWWLRS Trigger: TGAGCGCAGCCACCACTCCCACAGTTGGTTCCTCCC...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072481.12 ENSMUST00000080728.13 |
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| CDS-3UTR CCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTAACAATGCACTTGCTTaGATCTGCTCCTTTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVNNALA*ICSFEV Trigger: TACTTCAAAGGAGCAGATCCAAGCAAGTGCATTGTT...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGACCAAGTTCAGAGGTGTaGACTGAATGCCCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGPSSEV*TECPGQ Trigger: CTGCCCAGGGCATTCAGTCCACACCTCTGAACTTGG...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTCACTCCTCCGTCTATaGGGACCAGGAACTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNSLLRL*GPGTAR Trigger: ACGTGCAGTTCCTGGTCCCCATAGACGGAGGAGTGA...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCATCACTCCTCCGTCTATaGGGACCAGGAACTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPSLLRL*GPGTAR Trigger: ACGTGCAGTTCCTGGTCCCCATAGACGGAGGAGTGA...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGAGCACAGCCTGAAGCTTaGTCACTCCTCCGTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGAQPEA*SLLRLW Trigger: CCATAGACGGAGGAGTGACCAAGCTTCAGGCTGTGC...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAGCATTCCAGACTGCTaGAGGAAGCACAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSSIPDC*RKHSLK Trigger: CTTCAGGCTGTGCTTCCTCCAGCAGTCTGGAATGCT...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGCCATTTTCTGACTTCTaGGAGATATCGGGAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DDLAISTFAKRHRRGWGQPFSDF*EISGIF Trigger: GAAGATTCCCGATATCTCCCAGAAGTCAGAAAATGG...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCTCTCAACTGTGGGAGTaGTGGCTGCGCTCAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVHQARLKHVSQTTVLQGSQLWE*WLRSVS Trigger: ACTCACTGAGCGCAGCCACCACTCCCACAGTTGAGA...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066824.14 ENSMUST00000106882.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTGTGGCTCGTGTGGGCTaGGCTGCATTCCATCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: FCLRFSMCGTPFMITINIVARVG*AAFHLG Trigger: ACCGAGATGGAATGCAGCCCAGCCCACACGAGCCAC...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAGCCTCTGTGGCTGCCTaGTCATTTCCTGTTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPASVAA*SFPVAT Trigger: AGTTGCAACAGGAAATGACCAGGCAGCCACAGAGGC...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR CCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACAATTTTGGCCTCTGTaGCTGCCTGGTCATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKQFWPL*LPGHFL Trigger: CAGGAAATGACCAGGCAGCCACAGAGGCCAAAATTG...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR TCA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGCTCTTCAGATTCACTTaGGGAATAAAAGTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DDLAISTFAKRHRRGWGQLFRFT*GIKVLS Trigger: GGAAAGCACTTTTATTCCTCAAGTGAATCTGAAGAG...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR TCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAGTTCATCGGTTGGCCTaGACCCCATATCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTVHRLA*TPYLRL Trigger: CAGCCTGAGATATGGGGTTCAGGCCAACCGATGAAC...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTGTTCATCGGTTGGCCTaGACCCCATATCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPVHRLA*TPYLRL Trigger: CAGCCTGAGATATGGGGTTCAGGCCAACCGATGAAC...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATGGCAAAGTGTCTGGTaGTACCAGCAGGGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGWQSVW*YQQGRT Trigger: TGTCCTTCCCTGCTGGTATCACCAGACACTTTGCCA...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGCAGACACCTGATATTTaGGCATGTCCACATTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: DDLAISTFAKRHRRGWGQQTPDI*ACPHYS Trigger: ACTATAATGTGGACATGCTCAAATATCAGGTGTCTG...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | TTTATCAAAGGGAACCAGATGAAACAGCAAGGTACTCATTCTATTGTCAGGATAGGAGGAAGCACAGCCTaGAGCTTGGTCACTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FIKGNQMKQQGTHSIVRIGGSTA*SLVTPP Trigger: CGGAGGAGTGACCAAGCTTCAGGCTGTGCTTCCTCC...TATCCTGACAATAGAATGAGTACCTTGCTGTTTCATCTGGTTCCCTTTGATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACATACTTCCTTCACTCGTaGACTGCACAACCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTYFLHS*TAQPAG Trigger: CCCCGCTGGTTGTGCAGTTCACGAGTGAAGGAAGTA...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTTGTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACTACTTCCTTCACTCGTaGACTGCACAACCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVRFEWIQNVIQQQMLHYFLHS*TAQPAG Trigger: CCCCGCTGGTTGTGCAGTTCACGAGTGAAGGAAGTA...GTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGACAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTTACTTCCTTCACTCGTaGACTGCACAACCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPYFLHS*TAQPAG Trigger: CCCCGCTGGTTGTGCAGTTCACGAGTGAAGGAAGTA...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR GCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTGCGCACACTCTGCTTTaGTATGGTAGGGTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPAHTLL*YGRVAR Trigger: ACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGC...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGGACGTCCTTAGATTaGAAGGGTTTAATCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQARTSLD*KGLILM Trigger: CATCAAGATTAAACCCTTGCAATCTAAGGACGTCCT...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR GCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACGGGTTCGGCAGGACGTaGTCTAACCTGCTGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNGFGRT*SNLLEF Trigger: AAATTCCAGCAGGTTAGAGCACGTCCTGCCGAACCC...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR GCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTCTATGCGCAGGTCAGTaGTCGCAGGCTCACAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFLCAGQ*SQAHSA Trigger: GGCGCTGTGAGCCTGCGAGCACTGACCTGCGCATAG...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAATGGGGACCAGGAACTaGACGTTGTTGAGGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTMGTRN*TLLRAT Trigger: AGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCCAT...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR GCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATTCAGCATTCCAGACTaGTGGAGGAAGCACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGFSIPD*WRKHSL Trigger: CAGGCTGTGCTTCCTCCAGCAGTCTGGAATGCTGAA...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR GCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCATTCAGCATTCCAGACTaGTGGAGGAAGCACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPFSIPD*WRKHSL Trigger: CAGGCTGTGCTTCCTCCAGCAGTCTGGAATGCTGAA...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
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| CDS-3UTR GCA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTTGCCAAGTACTTTCCTaGAGCAAACCTCTTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CDDLAISTFAKRHRRGWGCQVLS*SKPLLN Trigger: ATTAAGAAGAGGTTTGCTGCAGGAAAGTACTTGGCA...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR GCA 90 bp | ACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGGGAACCAGATGAAACAGTCGTGTGGGCTGGGCTaGATTCCATCTCGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCLDIQVDGFIKGNQMKQSCGLG*IPSRSG Trigger: GCCAGACCGAGATGGAATGCAGCCCAGCCCACACGA...CTGTTTCATCTGGTTCCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| CDS-3UTR CCA 90 bp | CTCCTTGTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACTTTGCTATGGTAGGGTaGCTCGTGTGGGCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLVRFEWIQNVIQQQMLHFAMVG*LVWAGH Trigger: ATGCCCAGCCCACACGAGCCACCCTACCATAGCAAA...GTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGACAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 |
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| CDS-3UTR CCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCATGTAAGTTCTGGAGTTaGGGTGGAACGCCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPCKFWS*GGTPGS Trigger: AGACCCAGGCGTTCCACCCCAACTCCAGAACTTACA...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
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| CDS-3UTR CCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTGTAAGTTCTGGAGTTaGGGTGGAACGCCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNCKFWS*GGTPGS Trigger: AGACCCAGGCGTTCCACCCCAACTCCAGAACTTACA...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACCTGTTCGAGGCGGAGTaGCTGGTACAGTTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNLFEAE*LVQFLE Trigger: CTCCAAAAACTGTACCAGCCACTCCGCCTCGAACAG...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTAAGGAACTAAGGGGGTaGCTGGTCGAGCAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPKELRG*LVEQEK Trigger: CTTCTCCTGCTCGACCAGCCACCCCCTTAGTTCCTT...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCCAGAGCTGCTGGGGATaGGTTGTTGGCAAAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CVHQARLKHVSQTTVLQGQSCWG*VVGKVS Trigger: AGACACTTTGCCAACAACCCATCCCCAGCAGCTCTG...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCGAAAGTCAGAGCTGCTaGGGATGGGTTGTTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSESQSC*GWVVGK Trigger: TTTGCCAACAACCCATCCCCAGCAGCTCTGACTTTC...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCACGTGCTCTAACCTGCTaGAATTTACCACCCGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPRALTC*NLPPGK Trigger: CTTTCCGGGTGGTAAATTCCAGCAGGTTAGAGCACG...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTTCACAGCAGAGAAGTTaGGGGTTCGGCAGGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCLRFSMCGTPFMITINISQQRS*GFGRTC Trigger: GCACGTCCTGCCGAACCCCCAACTTCTCTGCTGTGA...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATTCACAGCAGAGAAGTTaGGGGTTCGGCAGGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYSQQRS*GFGRTC Trigger: GCACGTCCTGCCGAACCCCCAACTTCTCTGCTGTGA...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTGTGAGTCATCAAATTTaGCATGTTTACCCAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ECRDFPADRPQVRTSVCVVSHQI*HVYPEF Trigger: GAATTCTGGGTAAACATGCCAAATTTGATGACTCAC...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACCACTGCAGTGGACATaGCATCCGTGTTGTACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKPLQWT*HPCCTY Trigger: ATAAGTACAACACGGATGCCATGTCCACTGCAGTGG...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGAAGCATTCCAGACTGCTaGAGGAAGCACAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGSIPDC*RKHSLK Trigger: CTTCAGGCTGTGCTTCCTCCAGCAGTCTGGAATGCT...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCAAGCATTCCAGACTGCTaGAGGAAGCACAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPSIPDC*RKHSLK Trigger: CTTCAGGCTGTGCTTCCTCCAGCAGTCTGGAATGCT...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCAGCATTCCAGACTGCTaGAGGAAGCACAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CVHQARLKHVSQTTVLQGSIPDC*RKHSLK Trigger: CTTCAGGCTGTGCTTCCTCCAGCAGTCTGGAATGCT...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACATCTCAACTGTGGGAGTaGTGGCTGCGCTCAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTSQLWE*WLRSVS Trigger: ACTCACTGAGCGCAGCCACCACTCCCACAGTTGAGA...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066824.14 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTTTTGCTATGGTAGGGTaGCTCGTGTGGGCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FCLRFSMCGTPFMITINIFAMVG*LVWAGL Trigger: CAGCCCAGCCCACACGAGCCACCCTACCATAGCAAA...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCCTTGGGCGACAACACTaGCCCAAAAATGCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVHQARLKHVSQTTVLQGLGRQH*PKNAVQ Trigger: CTGGACAGCATTTTTGGGCCAGTGTTGTCGCCCAAG...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | CTCCTTGTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACTGGCAAAGTGTCTGGTaGTACCAGCAGGGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLVRFEWIQNVIQQQMLHWQSVW*YQQGRT Trigger: TGTCCTTCCCTGCTGGTATCACCAGACACTTTGCCA...GTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGACAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACACCCTGGGCAGACACCTaGTATTTGAGCATGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTPWADT*YLSMST Trigger: TGTGGACATGCTCAAATATCAGGTGTCTGCCCAGGG...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTCCCTGGGCAGACACCTaGTATTTGAGCATGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPPWADT*YLSMST Trigger: TGTGGACATGCTCAAATATCAGGTGTCTGCCCAGGG...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTGGAGGAAGCACAGCCTaGAGCTTGGTCACTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFGGSTA*SLVTPP Trigger: CGGAGGAGTGACCAAGCTTCAGGCTGTGCTTCCTCC...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAGAAGTATACACACTGCCGAAATGCACAAGCATCTGCTCTTGGACTTTCATTTGGTGCCCCATTaGTTTTCTTCGAAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGRSIHTAEMHKHLLLDFHLVPH*FSSKLS Trigger: AGAAAGCTTCGAAGAAAAGCAATGGGGCACCAAATG...AAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTATACTTCTCCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGATAAAATCCATTTGGTaGCCCATTGCTTTTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DDLAISTFAKRHRRGWGQIKSIW*PIAFLR Trigger: TCGAAGAAAAGCAATGGGGCACCAAATGGATTTTAT...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCATGTTGAATTTCTTGTaGGACTCTTCTTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DFPADRPQVRTSVCVHQAMLNFL*DSSSSS Trigger: TGAAGAGGAAGAAGAGTCGCACAAGAAATTCAACAT...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTAGTGGAGGCGGAGTGGTaGTGCAAGGAACTAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCISVSIVPFNSTTIKLLVEAEW*CKELRG Trigger: CCCCCTTAGTTCCTTGCAGCACCACTCCGCCTCCAC...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAGGGTTCGGCAGGACGTaGTCTAACCTGCTGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTGFGRT*SNLLEF Trigger: AAATTCCAGCAGGTTAGAGCACGTCCTGCCGAACCC...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTGTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACTTGGGGTGGAACGCCTaGGTCTTGCAACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLVRFEWIQNVIQQQMLHLGWNA*VLQLLH Trigger: GTGAAGAAGTTGCAAGACCCAGGCGTTCCACCCCAA...GTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGACAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTTGTAAGTTCTGGAGTTaGGGTGGAACGCCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPCKFWS*GGTPGS Trigger: AGACCCAGGCGTTCCACCCCAACTCCAGAACTTACA...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TACGGTAAATCAGCACAAGAACTTGCAGTGAAATGGAAACTCAACACCGATACTTGTAAGTTCTGGAGTTaGGGTGGAACGCCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YGKSAQELAVKWKLNTDTCKFWS*GGTPGS Trigger: AGACCCAGGCGTTCCACCCCAACTCCAGAACTTACA...AGTATCGGTGTTGAGTTTCCATTTCACTGCAAGTTCTTGTGCTGATTTACCGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCACTTGGGTTCATCGGTTaGCCTGAACCCCATATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPLGFIG*PEPHIS Trigger: TGAGATATGGGGTTCAGGCCAACCGATGAACCCAAG...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACCTTGGGTTCATCGGTTaGCCTGAACCCCATATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNLGFIG*PEPHIS Trigger: TGAGATATGGGGTTCAGGCCAACCGATGAACCCAAG...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTCTGTTCGAGGCGGAGTaGCTGGTACAGTTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPLFEAE*LVQFLE Trigger: CTCCAAAAACTGTACCAGCCACTCCGCCTCGAACAG...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAGGAGGAGTGTATGGGTaGGCTAAAAGGTCTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTGGVYG*AKRSGH Trigger: GTGTCCAGACCTTTTAGCCCACCCATACACTCCTCC...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTGTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACCAGAGCTGCTGGGGATaGGTTGTTGGCAAAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVRFEWIQNVIQQQMLHQSCWG*VVGKVS Trigger: AGACACTTTGCCAACAACCCATCCCCAGCAGCTCTG...GTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGACAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGAGAAAGTCAGAGCTGCTaGGGATGGGTTGTTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGESQSC*GWVVGK Trigger: TTTGCCAACAACCCATCCCCAGCAGCTCTGACTTTC...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACCGTGCTCTAACCTGCTaGAATTTACCACCCGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNRALTC*NLPPGK Trigger: CTTTCCGGGTGGTAAATTCCAGCAGGTTAGAGCACG...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | AGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAACTTTGTGAGTCATCAAATTTaGCATGTTTACCCAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSKCYTGQLSGRAPNRNFVSHQI*HVYPEF Trigger: GAATTCTGGGTAAACATGCCAAATTTGATGACTCAC...AAAGTTCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATCCAAGTTCAGAGGTGTaGACTGAATGCCCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYPSSEV*TECPGQ Trigger: CTGCCCAGGGCATTCAGTCCACACCTCTGAACTTGG...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCACCACTGCAGTGGACATaGCATCCGTGTTGTACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPPLQWT*HPCCTY Trigger: ATAAGTACAACACGGATGCCATGTCCACTGCAGTGG...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATGCACAGCCTGAAGCTTaGTCACTCCTCCGTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYAQPEA*SLLRLW Trigger: CCATAGACGGAGGAGTGACCAAGCTTCAGGCTGTGC...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CCA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATCTTCTGACACAACTGTaGGAGTGGTGGCTGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYLLTQL*EWWLRS Trigger: TGAGCGCAGCCACCACTCCCACAGTTGTGTCAGAAG...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149547.2 |
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| CDS-3UTR TCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCATGCGATGTTGCCTATTaGAGCCTTCAGCTCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPCDVAY*SLQLIY Trigger: GTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCA...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATCCCTGGGCAGACACCTaGTATTTGAGCATGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYPWADT*YLSMST Trigger: TGTGGACATGCTCAAATATCAGGTGTCTGCCCAGGG...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR TCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTTACGCCTCCATTTTCTaGCTTCTGGGAGATATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPYASIF*LLGDIG Trigger: CCCGATATCTCCCAGAAGTCAGAAAATGGAGGCGTA...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCATGCTGTCCAGGTCACTaGTGGATGGTAGTTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPCCPGH*WMVVSQ Trigger: TTGAGAAACTACCATCCATCAGTGACCTGGACAGCA...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACGGGAAAGTGCGATGTTaGCTATTGAAGCCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNGKVRC*LLKPSA Trigger: AGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCC...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | GGTAAATCAGCACAAGAACTTGCAGTGAAATGGAAACTCAACACCGATACTGTGGGGAAAGTGCGATGTTaGCTATTGAAGCCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKSAQELAVKWKLNTDTVGKVRC*LLKPSA Trigger: AGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCC...CACAGTATCGGTGTTGAGTTTCCATTTCACTGCAAGTTCTTGTGCTGATTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR GCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAAAGAACTTCCGTCTTCTaGTCATCAAAAGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKRTSVF*SSKADS Trigger: AGAGTCAGCTTTTGATGAGCAGAAGACGGAAGTTCT...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTGGAGGAGTGTATGGGTaGGCTAAAAGGTCTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: FCLRFSMCGTPFMITINIGGVYG*AKRSGH Trigger: GTGTCCAGACCTTTTAGCCCACCCATACACTCCTCC...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTGAAAGTCAGAGCTGCTaGGGATGGGTTGTTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPESQSC*GWVVGK Trigger: TTTGCCAACAACCCATCCCCAGCAGCTCTGACTTTC...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTCGTGCTCTAACCTGCTaGAATTTACCACCCGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPRALTC*NLPPGK Trigger: CTTTCCGGGTGGTAAATTCCAGCAGGTTAGAGCACG...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCCCACTGCAGTGGACATaGCATCCGTGTTGTACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CVHQARLKHVSQTTVLQGPLQWT*HPCCTY Trigger: ATAAGTACAACACGGATGCCATGTCCACTGCAGTGG...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGAGTAGTTTCTCAATTTTaGCCTCTGTGGCTGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGVVSQF*PLWLPG Trigger: ACCAGGCAGCCACAGAGGCCAAAATTGAGAAACTAC...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCAGTAGTTTCTCAATTTTaGCCTCTGTGGCTGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPVVSQF*PLWLPG Trigger: ACCAGGCAGCCACAGAGGCCAAAATTGAGAAACTAC...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTGTTCATCGGTTGGCCTaGACCCCATATCTCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFVHRLA*TPYLRL Trigger: CAGCCTGAGATATGGGGTTCAGGCCAACCGATGAAC...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAAGAGACTTTCTTTAGGTaGGTCATCAAATTTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKETFFR*VIKFGM Trigger: CATGCCAAATTTGATGACTCACCTAAAGAAAGTCTC...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACAGACACCTGATATTTaGGCATGTCCACATTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: ADRPQVRTSVCVHQARLKQTPDI*ACPHYS Trigger: ACTATAATGTGGACATGCTCAAATATCAGGTGTCTG...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTACAGAGTGCCACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGGGTACGCCTCCATTTTCTaGCTTCTGGGAGATATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQSATCLDIQVDGFIKGYASIF*LLGDIG Trigger: CCCGATATCTCCCAGAAGTCAGAAAATGGAGGCGTA...CCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGTGGCACTCTGTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAGGACTTCTTCTAAATTaGGCGGAGATGGTACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTGLLLN*AEMVHG Trigger: GCCATGTACCATCTCCGCTCAATTTAGAAGAAGTCC...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCACATTTGGTGCCCCATTaGTTTTCTTCGAAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPHLVPH*FSSKLS Trigger: AGAAAGCTTCGAAGAAAAGCAATGGGGCACCAAATG...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAGAACTTCCGTCTTCTaGTCATCAAAAGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPRTSVF*SSKADS Trigger: AGAGTCAGCTTTTGATGAGCAGAAGACGGAAGTTCT...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGGGAACCAGATGAAACAGGGGTTCGGCAGGACGTaGTCTAACCTGCTGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TCLDIQVDGFIKGNQMKQGFGRT*SNLLEF Trigger: AAATTCCAGCAGGTTAGAGCACGTCCTGCCGAACCC...CTGTTTCATCTGGTTCCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACAACATGTTCCGGGGATaGATCAGAAAAATGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNNMFRG*IRKMDP Trigger: TGGGTCCATTTTTCTGATGCATCCCCGGAACATGTT...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTATCGAGGCGGAGTGGCTaGTACAGTTTTTGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCISVSIVPFNSTTIKLLSRRSG*YSFWRQ Trigger: CTGCCTCCAAAAACTGTACCAGCCACTCCGCCTCGA...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTTATCAAAGGGAACCAGATGAAACAGCAAGGTACTCATTCTATTGTCAGGATACTGTTCGAGGCGGAGTaGCTGGTACAGTTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIKGNQMKQQGTHSIVRILFEAE*LVQFLE Trigger: CTCCAAAAACTGTACCAGCCACTCCGCCTCGAACAG...TATCCTGACAATAGAATGAGTACCTTGCTGTTTCATCTGGTTCCCTTTGATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | CCCATCAGGTATCGCTGGCAGAGCAAAGGTAGATTTGCTTCCTTCAAAAGAAGAAACAATGCACTTGCTTaGATCTGCTCCTTTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PIRYRWQSKGRFASFKRRNNALA*ICSFEV Trigger: TACTTCAAAGGAGCAGATCCAAGCAAGTGCATTGTT...TCTTCTTTTGAAGGAAGCAAATCTACCTTTGCTCTGCCAGCGATACCTGATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATCGTGCTCTAACCTGCTaGAATTTACCACCCGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYRALTC*NLPPGK Trigger: CTTTCCGGGTGGTAAATTCCAGCAGGTTAGAGCACG...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTAGCACAGCCTGAAGCTTaGTCACTCCTCCGTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: RCISVSIVPFNSTTIKLLAQPEA*SLLRLW Trigger: CCATAGACGGAGGAGTGACCAAGCTTCAGGCTGTGC...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| 3UTR CAA 72 bp | ATAGTGCTGCACACAGAGCTTCACCAGAAGATGAAATaGCACAAGCTTAAAACCAAACAGCACCAACATCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVLHTELHQKMK*HKLKTKQHQHL Trigger: GAGATGTTGGTGCTGTTTGGTTTTAAGCTTGTGCAATTTCATCTTCTGGTGAAGCTCTGTGTGCAGCACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTCCCCATATCTCAGGCTaGTCTAAAAGAACTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FCLRFSMCGTPFMITINIPHISG*SKRTSV Trigger: GACGGAAGTTCTTTTAGATCAGCCTGAGATATGGGG...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTTGGCAAAGTGTCTGGTaGTACCAGCAGGGAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFWQSVW*YQQGRT Trigger: TGTCCTTCCCTGCTGGTATCACCAGACACTTTGCCA...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCGAGACTTTCTTTAGGTaGGTCATCAAATTTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSETFFR*VIKFGM Trigger: CATGCCAAATTTGATGACTCACCTAAAGAAAGTCTC...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATGGGAAAGTGCGATGTTaGCTATTGAAGCCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYGKVRC*LLKPSA Trigger: AGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCC...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTATTCAGCATTCCAGACTaGTGGAGGAAGCACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RCISVSIVPFNSTTIKLLFSIPD*WRKHSL Trigger: CAGGCTGTGCTTCCTCCAGCAGTCTGGAATGCTGAA...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCATGCCAAGTACTTTCCTaGAGCAAACCTCTTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPCQVLS*SKPLLN Trigger: ATTAAGAAGAGGTTTGCTGCAGGAAAGTACTTGGCA...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTCTGTTCGAGGCGGAGTaGCTGGTACAGTTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFLFEAE*LVQFLE Trigger: CTCCAAAAACTGTACCAGCCACTCCGCCTCGAACAG...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATCCACTGCAGTGGACATaGCATCCGTGTTGTACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYPLQWT*HPCCTY Trigger: ATAAGTACAACACGGATGCCATGTCCACTGCAGTGG...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTAGCATTCCAGACTGCTaGAGGAAGCACAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFSIPDC*RKHSLK Trigger: CTTCAGGCTGTGCTTCCTCCAGCAGTCTGGAATGCT...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTTATCAAAGGGAACCAGATGAAACAGCAAGGTACTCATTCTATTGTCAGGATACAATTTTGGCCTCTGTaGCTGCCTGGTCATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FIKGNQMKQQGTHSIVRIQFWPL*LPGHFL Trigger: CAGGAAATGACCAGGCAGCCACAGAGGCCAAAATTG...TATCCTGACAATAGAATGAGTACCTTGCTGTTTCATCTGGTTCCCTTTGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR CAA 72 bp | AGGATAATTGAGGTCATTACTAGCTGTGATGACACTTaGGGGGAAATGAATCAACCCAAGCCTCAATACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RIIEVITSCDDT*GEMNQPKPQYH Trigger: ATGGTATTGAGGCTTGGGTTGATTCATTTCCCCCAAAGTGTCATCACAGCTAGTAATGACCTCAATTATCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCCTCTTCAGATTCACTTaGGGAATAAAAGTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVHQARLKHVSQTTVLQGLFRFT*GIKVLS Trigger: GGAAAGCACTTTTATTCCTCAAGTGAATCTGAAGAG...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCCAGACACCTGATATTTaGGCATGTCCACATTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVHQARLKHVSQTTVLQGQTPDI*ACPHYS Trigger: ACTATAATGTGGACATGCTCAAATATCAGGTGTCTG...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTTACGCCTCCATTTTCTaGCTTCTGGGAGATATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFYASIF*LLGDIG Trigger: CCCGATATCTCCCAGAAGTCAGAAAATGGAGGCGTA...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTATACGCCTCCATTTTCTaGCTTCTGGGAGATATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCISVSIVPFNSTTIKLLYASIF*LLGDIG Trigger: CCCGATATCTCCCAGAAGTCAGAAAATGGAGGCGTA...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCATGCCAAGTACTTTCCTaGAGCAAACCTCTTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPCQVLS*SKPLLN Trigger: ATTAAGAAGAGGTTTGCTGCAGGAAAGTACTTGGCA...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTAGAAAGTCAGAGCTGCTaGGGATGGGTTGTTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCISVSIVPFNSTTIKLLESQSC*GWVVGK Trigger: TTTGCCAACAACCCATCCCCAGCAGCTCTGACTTTC...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAGTGAGTCATCAAATTTaGCATGTTTACCCAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPVSHQI*HVYPEF Trigger: GAATTCTGGGTAAACATGCCAAATTTGATGACTCAC...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTGTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACCCATTTTCTGACTTCTaGGAGATATCGGGAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLVRFEWIQNVIQQQMLHPFSDF*EISGIF Trigger: GAAGATTCCCGATATCTCCCAGAAGTCAGAAAATGG...GTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGACAAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTCCATTTTCTGACTTCTaGGAGATATCGGGAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPPFSDF*EISGIF Trigger: GAAGATTCCCGATATCTCCCAGAAGTCAGAAAATGG...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTTGCGATGTTGCCTATTaGAGCCTTCAGCTCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFCDVAY*SLQLIY Trigger: GTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCA...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTCCCCATATCTCAGGCTaGTCTAAAAGAACTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFPHISG*SKRTSV Trigger: GACGGAAGTTCTTTTAGATCAGCCTGAGATATGGGG...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR TCA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTACCCCATATCTCAGGCTaGTCTAAAAGAACTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RCISVSIVPFNSTTIKLLPHISG*SKRTSV Trigger: GACGGAAGTTCTTTTAGATCAGCCTGAGATATGGGG...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATAAAATCCATTTGGTaGCCCATTGCTTTTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CVHQARLKHVSQTTVLQGIKSIW*PIAFLR Trigger: TCGAAGAAAAGCAATGGGGCACCAAATGGATTTTAT...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | CCTTACGGTAAATCAGCACAAGAACTTGCAGTGAAATGGAAACTCAACACCGATATGTTGAATTTCTTGTaGGACTCTTCTTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PYGKSAQELAVKWKLNTDMLNFL*DSSSSS Trigger: TGAAGAGGAAGAAGAGTCGCACAAGAAATTCAACAT...ATCGGTGTTGAGTTTCCATTTCACTGCAAGTTCTTGTGCTGATTTACCGTAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTAGAACTTCCGTCTTCTaGTCATCAAAAGCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FCLRFSMCGTPFMITINIRTSVF*SSKADS Trigger: AGAGTCAGCTTTTGATGAGCAGAAGACGGAAGTTCT...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGGGAACCAGATGAAACAGAACATGTTCCGGGGATaGATCAGAAAAATGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TCLDIQVDGFIKGNQMKQNMFRG*IRKMDP Trigger: TGGGTCCATTTTTCTGATGCATCCCCGGAACATGTT...CTGTTTCATCTGGTTCCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACATCTTTAATGAAGGTCTaGTCAGCAACTTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTSLMKV*SATFFW Trigger: CCAGAAGAAAGTTGCTGAGCAGACCTTCATTAAAGA...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAAACAATGCACTTGCTTaGATCTGCTCCTTTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTNNALA*ICSFEV Trigger: TACTTCAAAGGAGCAGATCCAAGCAAGTGCATTGTT...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCAGTGAGTCATCAAATTTaGCATGTTTACCCAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPVSHQI*HVYPEF Trigger: GAATTCTGGGTAAACATGCCAAATTTGATGACTCAC...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTACCACTGCAGTGGACATaGCATCCGTGTTGTACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RCISVSIVPFNSTTIKLLPLQWT*HPCCTY Trigger: ATAAGTACAACACGGATGCCATGTCCACTGCAGTGG...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTCCATTTTCTGACTTCTaGGAGATATCGGGAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FCLRFSMCGTPFMITINIPFSDF*EISGIF Trigger: GAAGATTCCCGATATCTCCCAGAAGTCAGAAAATGG...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| 3UTR CAA 72 bp | CACTTTCAATGCAGACTTTACAGAGTGCCACTTGTCTaGACATTCAAGTTGATGGTTTTATCAAAGGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: HFQCRLYRVPLV*TFKLMVLSKGT Trigger: GGTTCCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGTGGCACTCTGTAAAGTCTGCATTGAAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | AGTATACCTTACGGTAAATCAGCACAAGAACTTGCAGTGAAATGGAAACTCAACCTCTTCAGATTCACTTaGGGAATAAAAGTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIPYGKSAQELAVKWKLNLFRFT*GIKVLS Trigger: GGAAAGCACTTTTATTCCTCAAGTGAATCTGAAGAG...GTTGAGTTTCCATTTCACTGCAAGTTCTTGTGCTGATTTACCGTAAGGTATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATCAGACACCTGATATTTaGGCATGTCCACATTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYQTPDI*ACPHYS Trigger: ACTATAATGTGGACATGCTCAAATATCAGGTGTCTG...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAATAAAATCCATTTGGTaGCCCATTGCTTTTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VRTSVCVHQARLKHVSQTIKSIW*PIAFLR Trigger: TCGAAGAAAAGCAATGGGGCACCAAATGGATTTTAT...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTTGTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACATGTTGAATTTCTTGTaGGACTCTTCTTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVRFEWIQNVIQQQMLHMLNFL*DSSSSS Trigger: TGAAGAGGAAGAAGAGTCGCACAAGAAATTCAACAT...GTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGACAAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTATGTTGAATTTCTTGTaGGACTCTTCTTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPMLNFL*DSSSSS Trigger: TGAAGAGGAAGAAGAGTCGCACAAGAAATTCAACAT...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTAGGACGTCCTTAGATTaGAAGGGTTTAATCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FCLRFSMCGTPFMITINIRTSLD*KGLILM Trigger: CATCAAGATTAAACCCTTGCAATCTAAGGACGTCCT...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTACAGAGTGCCACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGGGAGGACGTCCTTAGATTaGAAGGGTTTAATCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLQSATCLDIQVDGFIKGRTSLD*KGLILM Trigger: CATCAAGATTAAACCCTTGCAATCTAAGGACGTCCT...CCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGTGGCACTCTGTAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTACAGAGTGCCACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGGGTGCCAAGTACTTTCCTaGAGCAAACCTCTTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLQSATCLDIQVDGFIKGCQVLS*SKPLLN Trigger: ATTAAGAAGAGGTTTGCTGCAGGAAAGTACTTGGCA...CCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGTGGCACTCTGTAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATAACAATGCACTTGCTTaGATCTGCTCCTTTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYNNALA*ICSFEV Trigger: TACTTCAAAGGAGCAGATCCAAGCAAGTGCATTGTT...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTGTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACGTGAGTCATCAAATTTaGCATGTTTACCCAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLVRFEWIQNVIQQQMLHVSHQI*HVYPEF Trigger: GAATTCTGGGTAAACATGCCAAATTTGATGACTCAC...GTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGACAAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTACAGAGTGCCACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGGGGATGCATCAGAAAAATaGACCCACTTCTCTTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLQSATCLDIQVDGFIKGDASEK*THFSSV Trigger: TACTGAAGAGAAGTGGGTCCATTTTTCTGATGCATC...CCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGTGGCACTCTGTAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR CAA 72 bp | CCCAAAGATGTAAATGATAAGTTTAGAATTCTCCTTTaGGATGGACCAGGGGACTATTTGTTTTCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PKDVNDKFRILL*DGPGDYLFSSI Trigger: GATGGAGGAAAACAAATAGTCCCCTGGTCCATCCAAAAGGAGAATTCTAAACTTATCATTTACATCTTTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | TTTATCAAAGGGAACCAGATGAAACAGCAAGGTACTCATTCTATTGTCAGGATACTCTTCAGATTCACTTaGGGAATAAAAGTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIKGNQMKQQGTHSIVRILFRFT*GIKVLS Trigger: GGAAAGCACTTTTATTCCTCAAGTGAATCTGAAGAG...TATCCTGACAATAGAATGAGTACCTTGCTGTTTCATCTGGTTCCCTTTGATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | TTTATCAAAGGGAACCAGATGAAACAGCAAGGTACTCATTCTATTGTCAGGATACAGACACCTGATATTTaGGCATGTCCACATTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIKGNQMKQQGTHSIVRIQTPDI*ACPHYS Trigger: ACTATAATGTGGACATGCTCAAATATCAGGTGTCTG...TATCCTGACAATAGAATGAGTACCTTGCTGTTTCATCTGGTTCCCTTTGATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTAAAAACATCATCTTCTaGCACAACTGTGGGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFKNIIF*HNCGSG Trigger: ACCACTCCCACAGTTGTGTCAGAAGATGATGTTTTT...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATGTTGAATTTCTTGTaGGACTCTTCTTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYMLNFL*DSSSSS Trigger: TGAAGAGGAAGAAGAGTCGCACAAGAAATTCAACAT...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | AGACTTTACAGAGTGCCACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGTCTTTAATGAAGGTCTaGTCAGCAACTTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLYRVPLVLTFKLMVLSKSLMKV*SATFFW Trigger: CCAGAAGAAAGTTGCTGAGCAGACCTTCATTAAAGA...CTTTGATAAAACCATCAACTTGAATGTCAAGACAAGTGGCACTCTGTAAAGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| 3UTR CAA 72 bp | TTCCCCACTGAAGCTCTGAATTTTCACGTCTTAATTTaGAGATCACCAACTGTCGTTTCATTTCACAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPTEALNFHVLI*RSPTVVSFHNS Trigger: ACTATTGTGAAATGAAACGACAGTTGGTGATCTCAAAATTAAGACGTGAAAATTCAGAGCTTCAGTGGGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR TCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTCTCTTCAGATTCACTTaGGGAATAAAAGTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFLFRFT*GIKVLS Trigger: GGAAAGCACTTTTATTCCTCAAGTGAATCTGAAGAG...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTAAGGACGTCCTTAGATTaGAAGGGTTTAATCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RCISVSIVPFNSTTIKLLRTSLD*KGLILM Trigger: CATCAAGATTAAACCCTTGCAATCTAAGGACGTCCT...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR GCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTTGCCAAGTACTTTCCTaGAGCAAACCTCTTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFCQVLS*SKPLLN Trigger: ATTAAGAAGAGGTTTGCTGCAGGAAAGTACTTGGCA...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTGATGCATCAGAAAAATaGACCCACTTCTCTTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFDASEK*THFSSV Trigger: TACTGAAGAGAAGTGGGTCCATTTTTCTGATGCATC...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTATAAAATCCATTTGGTaGCCCATTGCTTTTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LRFSMCGTPFMITINIIFIKSIW*PIAFLR Trigger: TCGAAGAAAAGCAATGGGGCACCAAATGGATTTTAT...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR GCA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTAATGTTGAATTTCTTGTaGGACTCTTCTTCCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCISVSIVPFNSTTIKLLMLNFL*DSSSSS Trigger: TGAAGAGGAAGAAGAGTCGCACAAGAAATTCAACAT...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS GCA 90 bp | CTGGTCGAGCAGGAGAAGACGCACCACTGGTGGTCCCCGTACCACTaGCCGAGCCAGGTCCGGGGGACGAGACCACAGTCCTGTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVEQEKTHHWWSPYH*PSQVRGTRPQSCRW Trigger: CCACCTACAGGACTGTGGTCTCGTCCCCCGGACCTGGCTCGGGCAGTGGTACGGGGACCACCAGTGGTGCGTCTTCTCCTGCTCGACCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CCA 90 bp | GCCCGAGCCAGGTCCGGGGGACGAGACCACAGTCCTGTAGGTGGGTaGTGGTGGGGGAGGTGGAGTTGCTCTCTGTCCCAACCCACACTC | + |
|
Preference number: 5 (lower is better) Translates to: ARARSGGRDHSPVGG*WWGRWSCSLSQPTL Trigger: GAGTGTGGGTTGGGACAGAGAGCAACTCCACCTCCCCCACCACCACCCACCTACAGGACTGTGGTCTCGTCCCCCGGACCTGGCTCGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CCA 90 bp | GTAGCTTTGGCCGGGATGGAGGCCGGGGAGGAGGTGGAGGCGGAGTaGTGCTGCAAGGAACTAAGGGGGTGGCTGGTCGAGCAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VALAGMEAGEEVEAE*CCKELRGWLVEQEK Trigger: CTTCTCCTGCTCGACCAGCCACCCCCTTAGTTCCTTGCAGCACCACTCCGCCTCCACCTCCTCCCCGGCCTCCATCCCGGCCAAAGCTAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CCA 90 bp | CGAGCCAGGTCCGGGGGACGAGACCACAGTCCTGTAGGTGGGTGGTaGTGGGGGAGGTGGAGTTGCTCTCTGTCCCAACCCACACTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RARSGGRDHSPVGGW*WGRWSCSLSQPTLF Trigger: AAAGAGTGTGGGTTGGGACAGAGAGCAACTCCACCTCCCCCACCACCACCCACCTACAGGACTGTGGTCTCGTCCCCCGGACCTGGCTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CCA 90 bp | GGGGAGGAGGTGGAGGCGGAGTGGTGCTGCAAGGAACTAAGGGGGTaGCTGGTCGAGCAGGAGAAGACGCACCTGTTGCAACTGTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GEEVEAEWCCKELRG*LVEQEKTHLLQLLR Trigger: CCTTAACAGTTGCAACAGGTGCGTCTTCTCCTGCTCGACCAGCCACCCCCTTAGTTCCTTGCAGCACCACTCCGCCTCCACCTCCTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000149547.2 |
||
| CDS CCA 90 bp | TCCTTCCCGCGCACACTCTGCTTTGCTATGGTAGGGTGGCTCGTGTaGGCTGGGCTGCATTCCATCTCGGTCTGGCGAGCCTGTAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SFPRTLCFAMVGWLV*AGLHSISVWRACRV Trigger: GACTCTACAGGCTCGCCAGACCGAGATGGAATGCAGCCCAGCCCACACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000183855.8 |
||
| CDS CCA 90 bp | TTTCTTCCCTCCTTCCCGCGCACACTCTGCTTTGCTATGGTAGGGTaGCTCGTGTGGGCTGGGCTGCATTCCATCTCGGTCTGGCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLPSFPRTLCFAMVG*LVWAGLHSISVWRA Trigger: GGCTCGCCAGACCGAGATGGAATGCAGCCCAGCCCACACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAAGGAGGGAAGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTTTCCTGGAGGTAGCTTaGGCCGGGATGGAGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTFLEVA*AGMEAG Trigger: CCCGGCCTCCATCCCGGCCAAAGCTACCTCCAGGAA...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CCA 90 bp | TCCTTCCCGCGCACACTCTGCTTTGCTATGGTAGGGTGGCTCGTGTaGGCTGGGCATTCCATCTCGGTCTGGCGAGCCTGTAGAGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFPRTLCFAMVGWLV*AGHSISVWRACRVS Trigger: ACTGACTCTACAGGCTCGCCAGACCGAGATGGAATGCCCAGCCCACACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 |
||
| CDS CCA 90 bp | TTTCTTCCCTCCTTCCCGCGCACACTCTGCTTTGCTATGGTAGGGTaGCTCGTGTGGGCTGGGCATTCCATCTCGGTCTGGCGAGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLPSFPRTLCFAMVG*LVWAGHSISVWRAC Trigger: ACAGGCTCGCCAGACCGAGATGGAATGCCCAGCCCACACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAAGGAGGGAAGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 |
||
| CDS GCA 90 bp | GGGCCACTGCAGTGGACATGGCATCCGTGTTGTACTTATAGTCTATaGGCAGGTCAGTGCTCGCAGGCTCACAGCGCCAGTTCACCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPLQWTWHPCCTYSL*AGQCSQAHSASSPP Trigger: TGGCGGTGAACTGGCGCTGTGAGCCTGCGAGCACTGACCTGCGCATAGACTATAAGTACAACACGGATGCCATGTCCACTGCAGTGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CCA 90 bp | ACGCACCTGTTGCAACTGTTAAGGGGGAGCCTGTTCGAGGCGGAGTaGCTGGTACAGTTTTTGGAGGCAGAGGTGGAGGTGTTCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: THLLQLLRGSLFEAE*LVQFLEAEVEVFQW Trigger: CCACTGGAACACCTCCACCTCTGCCTCCAAAAACTGTACCAGCCACTCCGCCTCGAACAGGCTCCCCCTTAACAGTTGCAACAGGTGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCTTCCTGGAGGTAGCTTaGGCCGGGATGGAGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: DFPADRPQVRTSVCVHQAFLEVA*AGMEAG Trigger: CCCGGCCTCCATCCCGGCCAAAGCTACCTCCAGGAA...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTTTCCTGGAGGTAGCTTaGGCCGGGATGGAGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CDDLAISTFAKRHRRGWGFLEVA*AGMEAG Trigger: CCCGGCCTCCATCCCGGCCAAAGCTACCTCCAGGAA...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTATCACAGCAGAGAAGTaGGGGGTTCGGCAGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTITAEK*GVRQDV Trigger: CACGTCCTGCCGAACCCCCAACTTCTCTGCTGTGAT...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTAGGAACTGCACGTTGTaGAGGGCCACTGCAGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTRNCTL*RATAVD Trigger: GTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCCT...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTGTGGGGGAGGTGGAGTaGCTCTCTGTCCCAACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ECRDFPADRPQVRTSVCVVGEVE*LSVPTH Trigger: GTGGGTTGGGACAGAGAGCAACTCCACCTCCCCCAC...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CCA 90 bp | CACAGCAGAGAAGTTGGGGGTTCGGCAGGACGTGCTCTAACCTGCTaGAATTTACCACCCGGAAAGTCAGAGCTGCTGGGGATGGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HSREVGGSAGRALTC*NLPPGKSELLGMGC Trigger: ACAACCCATCCCCAGCAGCTCTGACTTTCCGGGTGGTAAATTCCAGCAGGTTAGAGCACGTCCTGCCGAACCCCCAACTTCTCTGCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS GCA 90 bp | TTTTCTTCGAAGCTTTCTTCCCTCCTTCCCGCGCACACTCTGCTTTaGTATGGTAGGGTGGCTCGTGTGGGCTGGGCATTCCATCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: FSSKLSSLLPAHTLL*YGRVARVGWAFHLG Trigger: ACCGAGATGGAATGCCCAGCCCACACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAAGGAGGGAAGAAAGCTTCGAAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 |
||
| CDS GCA 90 bp | TATCACAGCAGAGAAGTTGGGGGTTCGGCAGGACGTGCTCTAACCTaGTGGAATTTACCACCCGGAAAGTCAGAGCTGCTGGGGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: YHSREVGGSAGRALT*WNLPPGKSELLGMG Trigger: ACCCATCCCCAGCAGCTCTGACTTTCCGGGTGGTAAATTCCAGCAGGTTAGAGCACGTCCTGCCGAACCCCCAACTTCTCTGCTGTGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS GCA 90 bp | TGGACATGGCATCCGTGTTGTACTTATAGTCTATGCGCAGGTCAGTaGTCGCAGGCTCACAGCGCCAGTTCACCGCCAAGTTCAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WTWHPCCTYSLCAGQ*SQAHSASSPPSSEV Trigger: CACCTCTGAACTTGGCGGTGAACTGGCGCTGTGAGCCTGCGAGCACTGACCTGCGCATAGACTATAAGTACAACACGGATGCCATGTCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS GCA 90 bp | TTTTCTTCGAAGCTTTCTTCCCTCCTTCCCGCGCACACTCTGCTTTaGTATGGTAGGGTGGCTCGTGTGGGCTGGGCTGCATTCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSSKLSSLLPAHTLL*YGRVARVGWAAFHL Trigger: GAGATGGAATGCAGCCCAGCCCACACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAAGGAGGGAAGAAAGCTTCGAAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000183855.8 |
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| CDS CCA 90 bp | CATTTCCTGTTGCAACTGTTAAGGGGGAGCCTGTTCGAGGCGGAGTaGCTGGTACAGTTTTTGGAGGCAGAGGTGGAGGTGTTCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HFLLQLLRGSLFEAE*LVQFLEAEVEVFQW Trigger: CCACTGGAACACCTCCACCTCTGCCTCCAAAAACTGTACCAGCCACTCCGCCTCGAACAGGCTCCCCCTTAACAGTTGCAACAGGAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR CAA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTGGGGAAAGTGCGATGTaGCCTATTGAAGCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTGESAM*PIEAFS Trigger: GCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCC...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | CTTGCTAGCTCTGGCGACTCCGTACTTGGGTTCATCGGTTGGCCTGAACCCCATGGGGAAAGTGCGATGTaGCCTATTGAAGCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LASSGDSVLGFIGWPEPHGESAM*PIEAFS Trigger: GCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCC...ATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGAGCTAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
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| CDS-3UTR CAA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTGCTGCTGGGGATGGGTaGTTGGCAAAGTGTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ECRDFPADRPQVRTSVCVAAGDG*LAKCLV Trigger: CACCAGACACTTTGCCAACAACCCATCCCCAGCAGC...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GATTCAGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAGCTGCTGGGGATGGGTaGTTGGCAAAGTGTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DSAANATQANSVGEPQTGAAGDG*LAKCLV Trigger: CACCAGACACTTTGCCAACAACCCATCCCCAGCAGC...TCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTAGGAACTGCACGTTGTaGAGGGCCACTGCAGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ECRDFPADRPQVRTSVCVRNCTL*RATAVD Trigger: GTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCCT...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS TCA 90 bp | GCTTGGTCACTCCTCCGTCTATGGGGACCAGGAACTGCACGTTGTTaGGGGCCACTGCAGTGGACATGGCATCCGTGTTGTACTTATAGT | + |
|
Preference number: 5 (lower is better) Translates to: AWSLLRLWGPGTARC*GPLQWTWHPCCTYS Trigger: ACTATAAGTACAACACGGATGCCATGTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCCATAGACGGAGGAGTGACCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS GCA 90 bp | TCCTCCGTCTATGGGGACCAGGAACTGCACGTTGTTGAGGGCCACTaGAGTGGACATGGCATCCGTGTTGTACTTATAGTCTATGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVYGDQELHVVEGH*SGHGIRVVLIVYAQ Trigger: CTGCGCATAGACTATAAGTACAACACGGATGCCATGTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCCATAGACGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS CCA 90 bp | GGCCAGAGTGTCATCCAGAGGCTTCTTGCTTGTAAGTTCTGGAGTTaGGGTGGAACGCCTGGGTCTTGCAACTTCTTCACCACAGGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GQSVIQRLLACKFWS*GGTPGSCNFFTTGE Trigger: TTCGCCTGTGGTGAAGAAGTTGCAAGACCCAGGCGTTCCACCCCAACTCCAGAACTTACAAGCAAGAAGCCTCTGGATGACACTCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTAGGAACTGCACGTTGTaGAGGGCCACTGCAGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CDDLAISTFAKRHRRGWGRNCTL*RATAVD Trigger: GTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCCT...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS-3UTR CAA 90 bp | TGCGATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTACCAGGAACTGCACGTaGTTGAGGGCCACTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CDDLAISTFAKRHRRGWGTRNCT*LRATAV Trigger: CACTGCAGTGGCCCTCAACAACGTGCAGTTCCTGGT...ACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS TCA 90 bp | CGGACTTTTCCTCACAGGCGAAGGGGAAAGTGCGATGTTGCCTATTaGAGCCTTCAGCTCATCTACCGTCGCTGCATTCTTCAGGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: RTFPHRRRGKCDVAY*SLQLIYRRCILQDV Trigger: GACGTCCTGAAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGAGGAAAAGTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS GCA 90 bp | TGCGCCTCGGACTTTTCCTCACAGGCGAAGGGGAAAGTGCGATGTTaGCTATTGAAGCCTTCAGCTCATCTACCGTCGCTGCATTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CASDFSSQAKGKVRC*LLKPSAHLPSLHSS Trigger: TGAAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGAGGAAAAGTCCGAGGCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS CCA 90 bp | AGCAAGGGCCAGAGTGTCATCCAGAGGCTTCTTGCTTGTAAGTTCTaGAGTTGGGGTGGAACGCCTGGGTCTTGCAACTTCTTCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SKGQSVIQRLLACKF*SWGGTPGSCNFFTG Trigger: TCCAGTGAAGAAGTTGCAAGACCCAGGCGTTCCACCCCAACTCCAGAACTTACAAGCAAGAAGCCTCTGGATGACACTCTGGCCCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS CCA 90 bp | AGCAAGGGCCAGAGTGTCATCCAGAGGCTTCTTGCTTGTAAGTTCTaGAGTTGGGGTGGAACGCCTGGGTCTTGCAACTTCTTCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: SKGQSVIQRLLACKF*SWGGTPGSCNFFTT Trigger: TGTGGTGAAGAAGTTGCAAGACCCAGGCGTTCCACCCCAACTCCAGAACTTACAAGCAAGAAGCCTCTGGATGACACTCTGGCCCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTCCATTTGGTGCCCCATaGCTTTTCTTCGAAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTPFGAP*LFFEAF Trigger: GAAAGCTTCGAAGAAAAGCAATGGGGCACCAAATGG...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | GCTAGCTCTGGCGACTCCGTACTTGGGTTCATCGGTTGGCCTGAACCCCATATCCCATTTGGTGCCCCATaGCTTTTCTTCGAAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASSGDSVLGFIGWPEPHIPFGAP*LFFEAF Trigger: GAAAGCTTCGAAGAAAAGCAATGGGGCACCAAATGG...GATATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGAGCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTGTGCGATGTTGCCTATaGAAGCCTTCAGCTCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTVRCCL*KPSAHL Trigger: TAGATGAGCTGAAGGCTTCAATAGGCAACATCGCAC...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTGCTGGGGATGGGTTGTaGGCAAAGTGTCTGGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: ECRDFPADRPQVRTSVCVAGDGL*AKCLVI Trigger: TATCACCAGACACTTTGCCAACAACCCATCCCCAGC...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCCTGGTCATTTCCTGTaGCAACTGTTAAGGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ECRDFPADRPQVRTSVCVPGHFL*QLLRGS Trigger: GCTCCCCCTTAACAGTTGCAACAGGAAATGACCAGG...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS TCA 90 bp | CAACAAGTTCAATGTCACAGCCAGAGAGAGTACTTCCTTCACTCGTaGACTGCACAACCAGCGGGGAAGGTTTGCTCGGGCCTTCGGATA | + |
|
Preference number: 5 (lower is better) Translates to: QQVQCHSQREYFLHS*TAQPAGKVCSGLRI Trigger: TATCCGAAGGCCCGAGCAAACCTTCCCCGCTGGTTGTGCAGTTCACGAGTGAAGGAAGTACTCTCTCTGGCTGTGACATTGAACTTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS TCA 90 bp | CAGACTTGGGCGACAACACTGGCCCAAAAATGCTGTCCAGGTCACTaGTGGATGGTAGTTTCTCAATTTTGGCCTCTGTGGCTGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QTWATTLAQKCCPGH*WMVVSQFWPLWLPG Trigger: ACCAGGCAGCCACAGAGGCCAAAATTGAGAAACTACCATCCATCAGTGACCTGGACAGCATTTTTGGGCCAGTGTTGTCGCCCAAGTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS TCA 90 bp | CAACTTCTTCACCACAGGCGAAGGGGAAAGTGCGATGTTGCCTATTaGAGCCTTCAGCTCATCTACCGTCGCTGCATTCTTCAGGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLLHHRRRGKCDVAY*SLQLIYRRCILQDV Trigger: GACGTCCTGAAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGTGAAGAAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTTCCTGGAGGTAGCTTaGGCCGGGATGGAGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNFLEVA*AGMEAG Trigger: CCCGGCCTCCATCCCGGCCAAAGCTACCTCCAGGAA...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCGGTAGTTTCTCAATTTaGGCCTCTGTGGCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DFPADRPQVRTSVCVHQAGSFSI*ASVAAW Trigger: CCAGGCAGCCACAGAGGCCAAAATTGAGAAACTACC...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS TCA 90 bp | AACTGCACAACCAGCGGGGAAGGTTTGCTCGGGCCTTCGGATAACTaGAATCTCGCCAGTAAAGAACCTACGCCTCCATTTTCTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: NCTTSGEGLLGPSDN*NLASKEPTPPFSDF Trigger: GAAGTCAGAAAATGGAGGCGTAGGTTCTTTACTGGCGAGATTTCAGTTATCCGAAGGCCCGAGCAAACCTTCCCCGCTGGTTGTGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS TCA 90 bp | TTTAATTGCACCCACAGGCGAAGGGGAAAGTGCGATGTTGCCTATTaGAGCCTTCAGCTCATCTACCGTCGCTGCATTCTTCAGGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: FNCTHRRRGKCDVAY*SLQLIYRRCILQDV Trigger: GACGTCCTGAAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGGTGCAATTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149547.2 |
||
| CDS GCA 90 bp | GGTCTTGCAACTTCTTCACCACAGGCGAAGGGGAAAGTGCGATGTTaGCTATTGAAGCCTTCAGCTCATCTACCGTCGCTGCATTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLATSSPQAKGKVRC*LLKPSAHLPSLHSS Trigger: TGAAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGTGAAGAAGTTGCAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGTCTTGCTAGCTCTGGCGACTCCGTACTTGGGTTCATCGGTTGGCCTGAAGTGCGATGTTGCCTATaGAAGCCTTCAGCTCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: KGLASSGDSVLGFIGWPEVRCCL*KPSAHL Trigger: TAGATGAGCTGAAGGCTTCAATAGGCAACATCGCAC...TTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGAGCTAGCAAGACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTATCTTAACAATGCACTaGCTTGGATCTGCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTILTMH*LGSAPL Trigger: CAAAGGAGCAGATCCAAGCAAGTGCATTGTTAAGAT...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS GCA 90 bp | TTTTGTGTATTATCACAGCAGAGAAGTTGGGGGTTCGGCAGGACGTaGTCTAACCTGCTGGAATTTACCACCCGGAAAGTCAGAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FCVLSQQRSWGFGRT*SNLLEFTTRKVRAA Trigger: AGCAGCTCTGACTTTCCGGGTGGTAAATTCCAGCAGGTTAGAGCACGTCCTGCCGAACCCCCAACTTCTCTGCTGTGATAATACACAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGCCATTTGGTGCCCCATaGCTTTTCTTCGAAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DDLAISTFAKRHRRGWGQPFGAP*LFFEAF Trigger: GAAAGCTTCGAAGAAAAGCAATGGGGCACCAAATGG...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | CTTGCTAGCTCTGGCGACTCCGTACTTGGGTTCATCGGTTGGCCTGAACCCCATCCTCTTCAGATTCACTaGAGGAATAAAAGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LASSGDSVLGFIGWPEPHPLQIH*RNKSAF Trigger: GAAAGCACTTTTATTCCTCAAGTGAATCTGAAGAGG...ATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGAGCTAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | CTTGCTAGCTCTGGCGACTCCGTACTTGGGTTCATCGGTTGGCCTGAACCCCATTTGATGTTGAATTTCTaGTGCGACTCTTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LASSGDSVLGFIGWPEPHLMLNF*CDSSSS Trigger: AGAGGAAGAAGAGTCGCACAAGAAATTCAACATCAA...ATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGAGCTAGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTACCTGTTGCAACTGTTAAGGGGGAGCCTGTTCGAGGCGGAGTGGCTGGTCAGGACGTCCTTAGATaGCAAGGGTTTAATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLPVATVKGEPVRGGVAGQDVLR*QGFNLD Trigger: ATCAAGATTAAACCCTTGCAATCTAAGGACGTCCTG...ACCAGCCACTCCGCCTCGAACAGGCTCCCCCTTAACAGTTGCAACAGGTAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAATGGCTGGTACAGTTTTaGGAGGCAGAGGTGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ADRPQVRTSVCVHQARLKWLVQF*EAEVEV Trigger: CACCTCCACCTCTGCCTCCAAAAACTGTACCAGCCA...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAATCACAGCAGAGAAGTaGGGGGTTCGGCAGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPITAEK*GVRQDV Trigger: CACGTCCTGCCGAACCCCCAACTTCTCTGCTGTGAT...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | AGAACTGAGCAGCACAGTACTGGGTGCCGGAAGTCACTGCTGAATGCCGGGACTGGTATTGGCATCATTTaGTGTATTATCACAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RTEQHSTGCRKSLLNAGTGIGII*CIITAE Trigger: CTCTGCTGTGATAATACACAAAATGATGCCAATACC...AGTCCCGGCATTCAGCAGTGACTTCCGGCACCCAGTACTGTGCTGCTCAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAGGAACTGCACGTTGTaGAGGGCCACTGCAGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSRNCTL*RATAVD Trigger: GTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCCT...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTTGGACTTCTTCTAAATaGAGCGGAGATGGTACATGG | + |
|
Preference number: 5 (lower is better) Translates to: ECRDFPADRPQVRTSVCVWTSSK*SGDGTW Trigger: CCATGTACCATCTCCGCTCAATTTAGAAGAAGTCCA...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | AGCCGTAAAGATTCTAGTTTACCTGTTGCAACTGTTAAGGGGGAGCCTGTTCGATGGAACGCCTGGGTCTaGCAACTTCTTCACCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRKDSSLPVATVKGEPVRWNAWV*QLLHHR Trigger: CCTGTGGTGAAGAAGTTGCAAGACCCAGGCGTTCCA...TCGAACAGGCTCCCCCTTAACAGTTGCAACAGGTAAACTAGAATCTTTACGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGCGACTCCGTACTTGGGTTCATCGGTTGGCCTGAACCCCATATCTCAGGCTGCAAGGGTTTAATCTaGATGTTGAATTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGDSVLGFIGWPEPHISGCKGLI*MLNFLC Trigger: GCACAAGAAATTCAACATCAAGATTAAACCCTTGCA...GCCTGAGATATGGGGTTCAGGCCAACCGATGAACCCAAGTACGGAGTCGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | AGACTTTACAGAGTGCCACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGTTCCTGGAGGTAGCTTaGGCCGGGATGGAGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLYRVPLVLTFKLMVLSKFLEVA*AGMEAG Trigger: CCCGGCCTCCATCCCGGCCAAAGCTACCTCCAGGAA...CTTTGATAAAACCATCAACTTGAATGTCAAGACAAGTGGCACTCTGTAAAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | GATTCAGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAATCTTAACAATGCACTaGCTTGGATCTGCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DSAANATQANSVGEPQTGILTMH*LGSAPL Trigger: CAAAGGAGCAGATCCAAGCAAGTGCATTGTTAAGAT...TCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCTGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | TACACACTGCCGAAATGCACAAGCATCTGCTCTTGGACTTTCCAGTCACCATTTGCTGGGGATGGGTTGTaGGCAAAGTGTCTGGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: YTLPKCTSICSWTFQSPFAGDGL*AKCLVI Trigger: TATCACCAGACACTTTGCCAACAACCCATCCCCAGC...AAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCAGCTGCTGGGGATGGGTaGTTGGCAAAGTGTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPAAGDG*LAKCLV Trigger: CACCAGACACTTTGCCAACAACCCATCCCCAGCAGC...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
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| CDS-3UTR CAA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACATCACAGCAGAGAAGTaGGGGGTTCGGCAGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNITAEK*GVRQDV Trigger: CACGTCCTGCCGAACCCCCAACTTCTCTGCTGTGAT...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGAAGGAACTGCACGTTGTaGAGGGCCACTGCAGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGRNCTL*RATAVD Trigger: GTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCCT...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACACCAGGAACTGCACGTaGTTGAGGGCCACTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNTRNCT*LRATAV Trigger: CACTGCAGTGGCCCTCAACAACGTGCAGTTCCTGGT...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TACACACTGCCGAAATGCACAAGCATCTGCTCTTGGACTTTCCAGTCACCATTTCCTGGTCATTTCCTGTaGCAACTGTTAAGGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YTLPKCTSICSWTFQSPFPGHFL*QLLRGS Trigger: GCTCCCCCTTAACAGTTGCAACAGGAAATGACCAGG...AAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS CCA 90 bp | GGAGTCAACTCTGGAGTAACATGTTCCGGGGATGCATCAGAAAAATaGACCCACTTCTCTTCAGTATTAACAGCAACAGACTTGGGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: GVNSGVTCSGDASEK*THFSSVLTATDLGD Trigger: GTCGCCCAAGTCTGTTGCTGTTAATACTGAAGAGAAGTGGGTCCATTTTTCTGATGCATCCCCGGAACATGTTACTCCAGAGTTGACTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAGGGGAAAGTGCGATGTaGCCTATTGAAGCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPGESAM*PIEAFS Trigger: GCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCC...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAATGGAACGCCTGGGTCTaGCAACTTCTTCACTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: ADRPQVRTSVCVHQARLKWNAWV*QLLHWI Trigger: TATCCAGTGAAGAAGTTGCAAGACCCAGGCGTTCCA...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATGGCTGGTACAGTTTTaGGAGGCAGAGGTGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGWLVQF*EAEVEV Trigger: CACCTCCACCTCTGCCTCCAAAAACTGTACCAGCCA...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCATCTTAACAATGCACTaGCTTGGATCTGCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DFPADRPQVRTSVCVHQAILTMH*LGSAPL Trigger: CAAAGGAGCAGATCCAAGCAAGTGCATTGTTAAGAT...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGATCTTAACAATGCACTaGCTTGGATCTGCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DDLAISTFAKRHRRGWGQILTMH*LGSAPL Trigger: CAAAGGAGCAGATCCAAGCAAGTGCATTGTTAAGAT...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | GAATGCCGGGACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTGGTGAGTCATCAAATTaGGCATGTTTACCCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: ECRDFPADRPQVRTSVCVGESSN*ACLPRI Trigger: AATTCTGGGTAAACATGCCAAATTTGATGACTCACC...AACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTCCCGGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TTTATCAAAGGGAACCAGATGAAACAGCAAGGTACTCATTCTATTGTCAGGATAGTGGGGGAGGTGGAGTaGCTCTCTGTCCCAACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FIKGNQMKQQGTHSIVRIVGEVE*LSVPTH Trigger: GTGGGTTGGGACAGAGAGCAACTCCACCTCCCCCAC...TATCCTGACAATAGAATGAGTACCTTGCTGTTTCATCTGGTTCCCTTTGATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS GCA 90 bp | CAACACCATTTCTCCCGTGATCTTAACAATGCACTTGCTTGGATCTaGTCCTTTGAAGTAGGCGTTGACAGTTTCTGTGAAAGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QHHFSRDLNNALAWI*SFEVGVDSFCESCC Trigger: GCAGCAGCTTTCACAGAAACTGTCAACGCCTACTTCAAAGGAGCAGATCCAAGCAAGTGCATTGTTAAGATCACGGGAGAAATGGTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS GCA 90 bp | CACCTGTTCCCTTGGAGTCAACTCTGGAGTAACATGTTCCGGGGATaGATCAGAAAAATGGACCCACTTCTCTTCAGTATTAACAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HLFPWSQLWSNMFRG*IRKMDPLLFSINSN Trigger: GTTGCTGTTAATACTGAAGAGAAGTGGGTCCATTTTTCTGATGCATCCCCGGAACATGTTACTCCAGAGTTGACTCCAAGGGAACAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACCATTTGGTGCCCCATaGCTTTTCTTCGAAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ADRPQVRTSVCVHQARLKPFGAP*LFFEAF Trigger: GAAAGCTTCGAAGAAAAGCAATGGGGCACCAAATGG...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | GACTTTCCAGCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCCCTCTTCAGATTCACTaGAGGAATAAAAGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DFPADRPQVRTSVCVHQAPLQIH*RNKSAF Trigger: GAAAGCACTTTTATTCCTCAAGTGAATCTGAAGAGG...GGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGCTGGAAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAAATGCTACACAGGCCAACTCAGTGGGAGAGCCCCAAACAGGAACTTTCCTCTTCAGATTCACTaGAGGAATAAAAGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSKCYTGQLSGRAPNRNFPLQIH*RNKSAF Trigger: GAAAGCACTTTTATTCCTCAAGTGAATCTGAAGAGG...AAAGTTCCTGTTTGGGGCTCTCCCACTGAGTTGGCCTGTGTAGCATTTGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAAGTGCGATGTTGCCTATaGAAGCCTTCAGCTCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: ADRPQVRTSVCVHQARLKVRCCL*KPSAHL Trigger: TAGATGAGCTGAAGGCTTCAATAGGCAACATCGCAC...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCGGGGAAAGTGCGATGTaGCCTATTGAAGCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CVHQARLKHVSQTTVLQGGESAM*PIEAFS Trigger: GCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCC...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCATGGAACGCCTGGGTCTaGCAACTTCTTCACTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPWNAWV*QLLHWI Trigger: TATCCAGTGAAGAAGTTGCAAGACCCAGGCGTTCCA...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACAGGCCAGCTGGGGATGGGTTGTaGGCAAAGTGTCTGGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: VRFEWIQNVIQQQMLHRPAGDGL*AKCLVI Trigger: TATCACCAGACACTTTGCCAACAACCCATCCCCAGC...TGGCCTGTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTGCTGCTGGGGATGGGTaGTTGGCAAAGTGTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FCLRFSMCGTPFMITINIAAGDG*LAKCLV Trigger: CACCAGACACTTTGCCAACAACCCATCCCCAGCAGC...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATCACAGCAGAGAAGTaGGGGGTTCGGCAGGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: FCLRFSMCGTPFMITINIITAEK*GVRQDV Trigger: CACGTCCTGCCGAACCCCCAACTTCTCTGCTGTGAT...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGGGTATTGGCATCATTTaGTGTATTATCACAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DDLAISTFAKRHRRGWGQGIGII*CIITAE Trigger: CTCTGCTGTGATAATACACAAAATGATGCCAATACC...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTACCAGGAACTGCACGTaGTTGAGGGCCACTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FCLRFSMCGTPFMITINITRNCT*LRATAV Trigger: CACTGCAGTGGCCCTCAACAACGTGCAGTTCCTGGT...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTACAGAGTGCCACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGGGACCAGGAACTGCACGTaGTTGAGGGCCACTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLQSATCLDIQVDGFIKGTRNCT*LRATAV Trigger: CACTGCAGTGGCCCTCAACAACGTGCAGTTCCTGGT...CCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGTGGCACTCTGTAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATACCAGGAACTGCACGTaGTTGAGGGCCACTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYTRNCT*LRATAV Trigger: CACTGCAGTGGCCCTCAACAACGTGCAGTTCCTGGT...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGAGGTAGTTTCTCAATTTaGGCCTCTGTGGCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGGSFSI*ASVAAW Trigger: CCAGGCAGCCACAGAGGCCAAAATTGAGAAACTACC...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS TCA 90 bp | GTTATCTGCCAAGTACTTTCCTGCAGCAAACCTCTTCTTAATGAGTaGAAACCGGTAGCCTGCTCCAACAAGTTCAATGTCACAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VICQVLSCSKPLLNE*KPVACSNKFNVTAR Trigger: TCTGGCTGTGACATTGAACTTGTTGGAGCAGGCTACCGGTTTTCACTCATTAAGAAGAGGTTTGCTGCAGGAAAGTACTTGGCAGATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GATGACTTAGCAATCTCCACATTTGCTAAACGGCACAGAAGGGGCTGGGGTCAGTGCAAGGGTTTAATCTaGATGTTGAATTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DDLAISTFAKRHRRGWGQCKGLI*MLNFLC Trigger: GCACAAGAAATTCAACATCAAGATTAAACCCTTGCA...CTGACCCCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | TGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCTGGAACGCCTGGGTCTaGCAACTTCTTCACTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: CVHQARLKHVSQTTVLQGWNAWV*QLLHWI Trigger: TATCCAGTGAAGAAGTTGCAAGACCCAGGCGTTCCA...GCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATTGGCTGGTACAGTTTTaGGAGGCAGAGGTGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYWLVQF*EAEVEV Trigger: CACCTCCACCTCTGCCTCCAAAAACTGTACCAGCCA...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTGCTGGGGATGGGTTGTaGGCAAAGTGTCTGGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPAGDGL*AKCLVI Trigger: TATCACCAGACACTTTGCCAACAACCCATCCCCAGC...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACATTAACAGCAACAGACTaGGGCGACAACACTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VRTSVCVHQARLKHVSQTLTATD*GDNTGP Trigger: TGGGCCAGTGTTGTCGCCCAAGTCTGTTGCTGTTAA...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACGTGCGATGTTGCCTATaGAAGCCTTCAGCTCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNVRCCL*KPSAHL Trigger: TAGATGAGCTGAAGGCTTCAATAGGCAACATCGCAC...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CAA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATGGGGAAAGTGCGATGTaGCCTATTGAAGCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYGESAM*PIEAFS Trigger: GCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCC...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAAATCTTAACAATGCACTaGCTTGGATCTGCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ADRPQVRTSVCVHQARLKILTMH*LGSAPL Trigger: CAAAGGAGCAGATCCAAGCAAGTGCATTGTTAAGAT...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CAA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATGCTGGGGATGGGTTGTaGGCAAAGTGTCTGGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYAGDGL*AKCLVI Trigger: TATCACCAGACACTTTGCCAACAACCCATCCCCAGC...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CAA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTAGCTGCTGGGGATGGGTaGTTGGCAAAGTGTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCISVSIVPFNSTTIKLLAAGDG*LAKCLV Trigger: CACCAGACACTTTGCCAACAACCCATCCCCAGCAGC...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CAA 90 bp | GATGACACTTTGGGGGAAATGAATCAACCCAAGCCTCAATACCATCGCTGGGAAGGTGAGTCATCAAATTaGGCATGTTTACCCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: DDTLGEMNQPKPQYHRWEGESSN*ACLPRI Trigger: AATTCTGGGTAAACATGCCAAATTTGATGACTCACC...TTCCCAGCGATGGTATTGAGGCTTGGGTTGATTCATTTCCCCCAAAGTGTCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| CDS-3UTR CAA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATTTAACAGCAACAGACTaGGGCGACAACACTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYLTATD*GDNTGP Trigger: TGGGCCAGTGTTGTCGCCCAAGTCTGTTGCTGTTAA...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS TCA 90 bp | GATGTTGAATTTCTTGTGCGACTCTTCTTCCTCTTCAGATTCACTTaGGGAATAAAAGTGCTTTCCTTTGGTAGAGCCTGGTTCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DVEFLVRLFFLFRFT*GIKVLSFGRAWFLR Trigger: CCTGAGGAACCAGGCTCTACCAAAGGAAAGCACTTTTATTCCTCAAGTGAATCTGAAGAGGAAGAAGAGTCGCACAAGAAATTCAACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000183855.8 |
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| CDS GCA 90 bp | TTCAGCTCATCTACCGTCGCTGCATTCTTCAGGACGTCCTTAGATTaGAAGGGTTTAATCTTGATGTTGAATTTCTTGTGCGACTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSSSTVAAFFRTSLD*KGLILMLNFLCDSS Trigger: AGAAGAGTCGCACAAGAAATTCAACATCAAGATTAAACCCTTGCAATCTAAGGACGTCCTGAAGAATGCAGCGACGGTAGATGAGCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 ENSMUST00000183855.8 |
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| CDS-3UTR CAA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAATTGATGTTGAATTTCTaGTGCGACTCTTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ADRPQVRTSVCVHQARLKLMLNF*CDSSSS Trigger: AGAGGAAGAAGAGTCGCACAAGAAATTCAACATCAA...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CAA 90 bp | TACACACTGCCGAAATGCACAAGCATCTGCTCTTGGACTTTCCAGTCACCATTTTTGATGTTGAATTTCTaGTGCGACTCTTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YTLPKCTSICSWTFQSPFLMLNF*CDSSSS Trigger: AGAGGAAGAAGAGTCGCACAAGAAATTCAACATCAA...AAATGGTGACTGGAAAGTCCAAGAGCAGATGCTTGTGCATTTCGGCAGTGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
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| CDS-3UTR CAA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTGTGCGATGTTGCCTATaGAAGCCTTCAGCTCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPVRCCL*KPSAHL Trigger: TAGATGAGCTGAAGGCTTCAATAGGCAACATCGCAC...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS-3UTR CAA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATTGGAACGCCTGGGTCTaGCAACTTCTTCACTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYWNAWV*QLLHWI Trigger: TATCCAGTGAAGAAGTTGCAAGACCCAGGCGTTCCA...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAAGGTGAGTCATCAAATTaGGCATGTTTACCCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: ADRPQVRTSVCVHQARLKGESSN*ACLPRI Trigger: AATTCTGGGTAAACATGCCAAATTTGATGACTCACC...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS CCA 90 bp | GGTGAGTCATCAAATTTGGCATGTTTACCCAGAATTCCTTGGTATTaGCATCATTTTGTGTATTATCACAGCAGAGAAGTTGGGGGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GESSNLACLPRIPWY*HHFVYYHSREVGGS Trigger: CGAACCCCCAACTTCTCTGCTGTGATAATACACAAAATGATGCCAATACCAAGGAATTCTGGGTAAACATGCCAAATTTGATGACTCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTACAGAGTGCCACTTGTCTTGACATTCAAGTTGATGGTTTTATCAAAGGGCCATTTGGTGCCCCATaGCTTTTCTTCGAAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLQSATCLDIQVDGFIKGPFGAP*LFFEAF Trigger: GAAAGCTTCGAAGAAAAGCAATGGGGCACCAAATGG...CCCTTTGATAAAACCATCAACTTGAATGTCAAGACAAGTGGCACTCTGTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCCCTCTTCAGATTCACTaGAGGAATAAAAGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSPLQIH*RNKSAF Trigger: GAAAGCACTTTTATTCCTCAAGTGAATCTGAAGAGG...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCTTGATGTTGAATTTCTaGTGCGACTCTTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSLMLNF*CDSSSS Trigger: AGAGGAAGAAGAGTCGCACAAGAAATTCAACATCAA...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAAGGTTTAATCTTGATGTaGAATTTCTTGTGCGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: ADRPQVRTSVCVHQARLKGLILM*NFLCDS Trigger: AGAGTCGCACAAGAAATTCAACATCAAGATTAAACC...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAATGCAAGGGTTTAATCTaGATGTTGAATTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ADRPQVRTSVCVHQARLKCKGLI*MLNFLC Trigger: GCACAAGAAATTCAACATCAAGATTAAACCCTTGCA...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTGTGCGATGTTGCCTATaGAAGCCTTCAGCTCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: FCLRFSMCGTPFMITINIVRCCL*KPSAHL Trigger: TAGATGAGCTGAAGGCTTCAATAGGCAACATCGCAC...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAGGTATTGGCATCATTTaGTGTATTATCACAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPGIGII*CIITAE Trigger: CTCTGCTGTGATAATACACAAAATGATGCCAATACC...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GCTGACAGACCCCAAGTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAATTTACCCAGAATTCCTaGGTATTGGCATCATTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ADRPQVRTSVCVHQARLKFTQNS*VLASFC Trigger: ACAAAATGATGCCAATACCAAGGAATTCTGGGTAAA...TTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTACTTGGGGTCTGTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCGGTGAGTCATCAAATTaGGCATGTTTACCCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSGESSN*ACLPRI Trigger: AATTCTGGGTAAACATGCCAAATTTGATGACTCACC...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAGGTGAGTCATCAAATTaGGCATGTTTACCCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: ARLKHVSQTTVLQGMDLPGESSN*ACLPRI Trigger: AATTCTGGGTAAACATGCCAAATTTGATGACTCACC...TGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACATGGACTTCTTCTAAATaGAGCGGAGATGGTACATGG | + |
|
Preference number: 5 (lower is better) Translates to: VRTSVCVHQARLKHVSQTWTSSK*SGDGTW Trigger: CCATGTACCATCTCCGCTCAATTTAGAAGAAGTCCA...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | TTGTTTCTGGTTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTTGATGTTGAATTTCTaGTGCGACTCTTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFLVLFKVLDVWHPLYDNLMLNF*CDSSSS Trigger: AGAGGAAGAAGAGTCGCACAAGAAATTCAACATCAA...GTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAACCAGAAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCGGTTTAATCTTGATGTaGAATTTCTTGTGCGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSGLILM*NFLCDS Trigger: AGAGTCGCACAAGAAATTCAACATCAAGATTAAACC...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCTGCAAGGGTTTAATCTaGATGTTGAATTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSCKGLI*MLNFLC Trigger: GCACAAGAAATTCAACATCAAGATTAAACCCTTGCA...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTTGTCAGATTTGAGTGGATACAAAATGTGATTCAGCAGCAAATGCTACACCAGGACGTCCTTAGATaGCAAGGGTTTAATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLVRFEWIQNVIQQQMLHQDVLR*QGFNLD Trigger: ATCAAGATTAAACCCTTGCAATCTAAGGACGTCCTG...GTGTAGCATTTGCTGCTGAATCACATTTTGTATCCACTCAAATCTGACAAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACACAGGACGTCCTTAGATaGCAAGGGTTTAATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VRTSVCVHQARLKHVSQTQDVLR*QGFNLD Trigger: ATCAAGATTAAACCCTTGCAATCTAAGGACGTCCTG...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTATGGAACGCCTGGGTCTaGCAACTTCTTCACTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: RCISVSIVPFNSTTIKLLWNAWV*QLLHWI Trigger: TATCCAGTGAAGAAGTTGCAAGACCCAGGCGTTCCA...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCTTTACCCAGAATTCCTaGGTATTGGCATCATTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SQIKTCLSNNSSPGHGSSFTQNS*VLASFC Trigger: ACAAAATGATGCCAATACCAAGGAATTCTGGGTAAA...GGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACACCTCTTCAGATTCACTaGAGGAATAAAAGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VRTSVCVHQARLKHVSQTPLQIH*RNKSAF Trigger: GAAAGCACTTTTATTCCTCAAGTGAATCTGAAGAGG...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS-3UTR CAA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATCAGGACGTCCTTAGATaGCAAGGGTTTAATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYQDVLR*QGFNLD Trigger: ATCAAGATTAAACCCTTGCAATCTAAGGACGTCCTG...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACAGGTATTGGCATCATTTaGTGTATTATCACAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VRTSVCVHQARLKHVSQTGIGII*CIITAE Trigger: CTCTGCTGTGATAATACACAAAATGATGCCAATACC...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TCATCAAGCCAGATTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATTTACCCAGAATTCCTaGGTATTGGCATCATTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSQIKTCLSNNSSPGHGFTQNS*VLASFC Trigger: ACAAAATGATGCCAATACCAAGGAATTCTGGGTAAA...TCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAATCTGGCTTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CCA 90 bp | TCTTTAGGTGAGTCATCAAATTTGGCATGTTTACCCAGAATTCCTTaGTATTGGCATCATTTTGTGTATTATCACAGCAGAGAAGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGESSNLACLPRIP*YWHHFVYYHSREVG Trigger: CCCAACTTCTCTGCTGTGATAATACACAAAATGATGCCAATACCAAGGAATTCTGGGTAAACATGCCAAATTTGATGACTCACCTAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTTGCCACATCATTTCAGAGCCGTAAAGATTCTAGTTTACCTGTTGCAACTGGTTTAATCTTGATGTaGAATTTCTTGTGCGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VFATSFQSRKDSSLPVATGLILM*NFLCDS Trigger: AGAGTCGCACAAGAAATTCAACATCAAGATTAAACC...AGTTGCAACAGGTAAACTAGAATCTTTACGGCTCTGAAATGATGTGGCAAACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS-3UTR CAA 90 bp | GTACGGACATCGGTTTGTGTTCATCAAGCCAGATTAAAACATGTCTCTCAAACATGCAAGGGTTTAATCTaGATGTTGAATTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VRTSVCVHQARLKHVSQTCKGLI*MLNFLC Trigger: GCACAAGAAATTCAACATCAAGATTAAACCCTTGCA...TGTTTGAGAGACATGTTTTAATCTGGCTTGATGAACACAAACCGATGTCCGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAACATGTCTCTCAAACAACAGTTCTCCAGGGCATGGATCTTCCAAATCCTTTTACCCAGAATTCCTaGGTATTGGCATCATTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LKHVSQTTVLQGMDLPNPFTQNS*VLASFC Trigger: ACAAAATGATGCCAATACCAAGGAATTCTGGGTAAA...AGGATTTGGAAGATCCATGCCCTGGAGAACTGTTGTTTGAGAGACATGTTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATGGTTTAATCTTGATGTaGAATTTCTTGTGCGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYGLILM*NFLCDS Trigger: AGAGTCGCACAAGAAATTCAACATCAAGATTAAACC...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTTGCAAGGGTTTAATCTaGATGTTGAATTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FCLRFSMCGTPFMITINICKGLI*MLNFLC Trigger: GCACAAGAAATTCAACATCAAGATTAAACCCTTGCA...AATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATATTTCAGGACGTCCTTAGATaGCAAGGGTTTAATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LRFSMCGTPFMITINIIFQDVLR*QGFNLD Trigger: ATCAAGATTAAACCCTTGCAATCTAAGGACGTCCTG...AAATATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTTAAGGTTCTCGATGTGTGGCACCCCCTTTATGATAACTATCAACATTATTTTACCCAGAATTCCTaGGTATTGGCATCATTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LFKVLDVWHPLYDNYQHYFTQNS*VLASFC Trigger: ACAAAATGATGCCAATACCAAGGAATTCTGGGTAAA...ATAATGTTGATAGTTATCATAAAGGGGGTGCCACACATCGAGAACCTTAAACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTAGGTATTGGCATCATTTaGTGTATTATCACAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RCISVSIVPFNSTTIKLLGIGII*CIITAE Trigger: CTCTGCTGTGATAATACACAAAATGATGCCAATACC...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS-3UTR CAA 90 bp | CGCTGTATCTCTGTAAGCATTGTGCCGTTCAACAGTACTACTATTAAATTATTAGGTTTAATCTTGATGTaGAATTTCTTGTGCGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: RCISVSIVPFNSTTIKLLGLILM*NFLCDS Trigger: AGAGTCGCACAAGAAATTCAACATCAAGATTAAACC...TAATAATTTAATAGTAGTACTGTTGAACGGCACAATGCTTACAGAGATACAGCG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS GCA 72 bp | CAGGAGAAGACGCACCACTGGTGGTCCCCGTACCACTaGCCGAGCCAGGTCCGGGGGACGAGACCACAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QEKTHHWWSPYH*PSQVRGTRPQS Trigger: GGACTGTGGTCTCGTCCCCCGGACCTGGCTCGGGCAGTGGTACGGGGACCACCAGTGGTGCGTCTTCTCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CCA 72 bp | TCCGGGGGACGAGACCACAGTCCTGTAGGTGGGTGGTaGTGGGGGAGGTGGAGTTGCTCTCTGTCCCAACCC | + |
|
Preference number: 6 (lower is better) Translates to: SGGRDHSPVGGW*WGRWSCSLSQP Trigger: GGGTTGGGACAGAGAGCAACTCCACCTCCCCCACCACCACCCACCTACAGGACTGTGGTCTCGTCCCCCGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CCA 72 bp | GTGGAGGCGGAGTGGTGCTGCAAGGAACTAAGGGGGTaGCTGGTCGAGCAGGAGAAGACGCACCACTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VEAEWCCKELRG*LVEQEKTHHWW Trigger: CCACCAGTGGTGCGTCTTCTCCTGCTCGACCAGCCACCCCCTTAGTTCCTTGCAGCACCACTCCGCCTCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CCA 72 bp | CGCACACTCTGCTTTGCTATGGTAGGGTGGCTCGTGTaGGCTGGGCTGCATTCCATCTCGGTCTGGCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RTLCFAMVGWLV*AGLHSISVWRA Trigger: GGCTCGCCAGACCGAGATGGAATGCAGCCCAGCCCACACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000183855.8 |
||
| CDS CCA 72 bp | CGCACACTCTGCTTTGCTATGGTAGGGTGGCTCGTGTaGGCTGGGCATTCCATCTCGGTCTGGCGAGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RTLCFAMVGWLV*AGHSISVWRAC Trigger: ACAGGCTCGCCAGACCGAGATGGAATGCCCAGCCCACACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 |
||
| CDS CCA 72 bp | TCCTTCCCGCGCACACTCTGCTTTGCTATGGTAGGGTaGCTCGTGTGGGCTGGGCATTCCATCTCGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SFPRTLCFAMVG*LVWAGHSISVW Trigger: CCAGACCGAGATGGAATGCCCAGCCCACACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 |
||
| CDS CCA 72 bp | GTGGAGGCGGAGTGGTGCTGCAAGGAACTAAGGGGGTaGCTGGTCGAGCAGGAGAAGACGCACCTGTTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VEAEWCCKELRG*LVEQEKTHLLQ Trigger: TTGCAACAGGTGCGTCTTCTCCTGCTCGACCAGCCACCCCCTTAGTTCCTTGCAGCACCACTCCGCCTCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000149547.2 |
||
| CDS CCA 72 bp | TCCTTCCCGCGCACACTCTGCTTTGCTATGGTAGGGTaGCTCGTGTGGGCTGGGCTGCATTCCATCTCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SFPRTLCFAMVG*LVWAGLHSISV Trigger: GACCGAGATGGAATGCAGCCCAGCCCACACGAGCCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000183855.8 |
||
| CDS CAA 72 bp | GTCACTCCTCCGTCTATGGGGACCAGGAACTGCACGTaGTTGAGGGCCACTGCAGTGGACATGGCATCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VTPPSMGTRNCT*LRATAVDMASV Trigger: CACGGATGCCATGTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCCATAGACGGAGGAGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS TCA 72 bp | CTCCTCCGTCTATGGGGACCAGGAACTGCACGTTGTTaGGGGCCACTGCAGTGGACATGGCATCCGTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLRLWGPGTARC*GPLQWTWHPCC Trigger: ACAACACGGATGCCATGTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCCATAGACGGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS GCA 72 bp | AGCTTGGTCACTCCTCCGTCTATGGGGACCAGGAACTaGACGTTGTTGAGGGCCACTGCAGTGGACATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLVTPPSMGTRN*TLLRATAVDMA Trigger: TGCCATGTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCCATAGACGGAGGAGTGACCAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CCA 72 bp | GGGTGCTATCGGAGGAGGGCTGGAGGAGTGTATGGGTaGGCTAAAAGGTCTGGACACATCTCCAACTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GCYRRRAGGVYG*AKRSGHISNSR Trigger: CCTGGAGTTGGAGATGTGTCCAGACCTTTTAGCCCACCCATACACTCCTCCAGCCCTCCTCCGATAGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CCA 72 bp | GAAGTTGGGGGTTCGGCAGGACGTGCTCTAACCTGCTaGAATTTACCACCCGGAAAGTCAGAGCTGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EVGGSAGRALTC*NLPPGKSELLG Trigger: CCCCAGCAGCTCTGACTTTCCGGGTGGTAAATTCCAGCAGGTTAGAGCACGTCCTGCCGAACCCCCAACTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CCA 72 bp | TTCTGGACTTCTTCTAAATTGAGCGGAGATGGTACATaGCGAGGACCAGGAGGCCCTGGGGGACCTGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FWTSSKLSGDGT*RGPGGPGGPAE Trigger: CTCCGCAGGTCCCCCAGGGCCTCCTGGTCCTCGCCATGTACCATCTCCGCTCAATTTAGAAGAAGTCCAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CAA 72 bp | ACTCCTCCGTCTATGGGGACCAGGAACTGCACGTTGTaGAGGGCCACTGCAGTGGACATGGCATCCGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TPPSMGTRNCTL*RATAVDMASVL Trigger: CAACACGGATGCCATGTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCCATAGACGGAGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS GCA 72 bp | TCCTTTGAAGTAGGCGTTGACAGTTTCTGTGAAAGCTaGTGCGACCGGGAGGGTGTCCTGGGCCCCCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: SFEVGVDSFCES*CDREGVLGPHS Trigger: ACTATGGGGGCCCAGGACACCCTCCCGGTCGCAGCAGCTTTCACAGAAACTGTCAACGCCTACTTCAAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS GCA 72 bp | TCACAGCCAGAGAGAGTACTTCCTTCACTCGTGAACTaGACAACCAGCGGGGAAGGTTTGCTCGGGCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SQPERVLPSLVN*TTSGEGLLGPS Trigger: CGAAGGCCCGAGCAAACCTTCCCCGCTGGTTGTGCAGTTCACGAGTGAAGGAAGTACTCTCTCTGGCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CAA 72 bp | ACCACCCGGAAAGTCAGAGCTGCTGGGGATGGGTTGTaGGCAAAGTGTCTGGTGATACCAGCAGGGAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TTRKVRAAGDGL*AKCLVIPAGKD Trigger: GTCCTTCCCTGCTGGTATCACCAGACACTTTGCCAACAACCCATCCCCAGCAGCTCTGACTTTCCGGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS TCA 72 bp | GAGCTGCTGGGGATGGGTTGTTGGCAAAGTGTCTGGTaGTACCAGCAGGGAAGGACAACACCATTTCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ELLGMGCWQSVW*YQQGRTTPFLP Trigger: CGGGAGAAATGGTGTTGTCCTTCCCTGCTGGTATCACCAGACACTTTGCCAACAACCCATCCCCAGCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS TCA 72 bp | CAATGTCACAGCCAGAGAGAGTACTTCCTTCACTCGTaGACTGCACAACCAGCGGGGAAGGTTTGCTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QCHSQREYFLHS*TAQPAGKVCSG Trigger: GCCCGAGCAAACCTTCCCCGCTGGTTGTGCAGTTCACGAGTGAAGGAAGTACTCTCTCTGGCTGTGACATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS GCA 72 bp | AGAGAAGTTGGGGGTTCGGCAGGACGTGCTCTAACCTaGTGGAATTTACCACCCGGAAAGTCAGAGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: REVGGSAGRALT*WNLPPGKSELL Trigger: CAGCAGCTCTGACTTTCCGGGTGGTAAATTCCAGCAGGTTAGAGCACGTCCTGCCGAACCCCCAACTTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS GCA 72 bp | CATCCGTGTTGTACTTATAGTCTATGCGCAGGTCAGTaGTCGCAGGCTCACAGCGCCAGTTCACCGCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HPCCTYSLCAGQ*SQAHSASSPPS Trigger: ACTTGGCGGTGAACTGGCGCTGTGAGCCTGCGAGCACTGACCTGCGCATAGACTATAAGTACAACACGGATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CCA 72 bp | GGGTGGCTCGTGTGGGCTGGGCATTCCATCTCGGTCTaGCGAGCCTGTAGAGTCAGTGTCTTTTTCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GWLVWAGHSISV*RACRVSVFFFL Trigger: AAGAAAGAAAAAGACACTGACTCTACAGGCTCGCCAGACCGAGATGGAATGCCCAGCCCACACGAGCCACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 |
||
| CDS CAA 90 bp | CTGCGCCTCGGACTTTTCCTCACAGGCGAAGGGGAAAGTGCGATGTaGCCTATTGAAGCCTTCAGCTCATCTACCGTCGCTGCATTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRLGLFLTGEGESAM*PIEAFSSSTVAAFF Trigger: GAAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGAGGAAAAGTCCGAGGCGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CAA 90 bp | CTGCTGGAATTTACCACCCGGAAAGTCAGAGCTGCTGGGGATGGGTaGTTGGCAAAGTGTCTGGTGATACCAGCAGGGAAGGACAACACC | + |
|
Preference number: 6 (lower is better) Translates to: LLEFTTRKVRAAGDG*LAKCLVIPAGKDNT Trigger: GGTGTTGTCCTTCCCTGCTGGTATCACCAGACACTTTGCCAACAACCCATCCCCAGCAGCTCTGACTTTCCGGGTGGTAAATTCCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CCA 72 bp | GGAATTTACCACCCGGAAAGTCAGAGCTGCTGGGGATaGGTTGTTGGCAAAGTGTCTGGTGATACCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GIYHPESQSCWG*VVGKVSGDTSR Trigger: CCTGCTGGTATCACCAGACACTTTGCCAACAACCCATCCCCAGCAGCTCTGACTTTCCGGGTGGTAAATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CCA 72 bp | CCTGCTGGAATTTACCACCCGGAAAGTCAGAGCTGCTaGGGATGGGTTGTTGGCAAAGTGTCTGGTGATACC | + |
|
Preference number: 6 (lower is better) Translates to: PAGIYHPESQSC*GWVVGKVSGDT Trigger: GGTATCACCAGACACTTTGCCAACAACCCATCCCCAGCAGCTCTGACTTTCCGGGTGGTAAATTCCAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CCA 72 bp | TGGCTCGTGTGGGCTGGGCTGCATTCCATCTCGGTCTaGCGAGCCTGTAGAGTCAGTGTCTTTTTCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: WLVWAGLHSISV*RACRVSVFFFL Trigger: AAGAAAGAAAAAGACACTGACTCTACAGGCTCGCCAGACCGAGATGGAATGCAGCCCAGCCCACACGAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000183855.8 |
||
| CDS CAA 72 bp | TTTACCACCCGGAAAGTCAGAGCTGCTGGGGATGGGTaGTTGGCAAAGTGTCTGGTGATACCAGCAGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FTTRKVRAAGDG*LAKCLVIPAGK Trigger: CTTCCCTGCTGGTATCACCAGACACTTTGCCAACAACCCATCCCCAGCAGCTCTGACTTTCCGGGTGGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CAA 72 bp | CACCCACAGGCGAAGGGGAAAGTGCGATGTTGCCTATaGAAGCCTTCAGCTCATCTACCGTCGCTGCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: HPQAKGKVRCCL*KPSAHLPSLHS Trigger: AGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149547.2 |
||
| CDS TCA 72 bp | CCTCACAGGCGAAGGGGAAAGTGCGATGTTGCCTATTaGAGCCTTCAGCTCATCTACCGTCGCTGCATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PHRRRGKCDVAY*SLQLIYRRCIL Trigger: AAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS TCA 72 bp | ACCAGCGGGGAAGGTTTGCTCGGGCCTTCGGATAACTaGAATCTCGCCAGTAAAGAACCTACGCCTCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: TSGEGLLGPSDN*NLASKEPTPPF Trigger: AAATGGAGGCGTAGGTTCTTTACTGGCGAGATTTCAGTTATCCGAAGGCCCGAGCAAACCTTCCCCGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS TCA 72 bp | ACCCACAGGCGAAGGGGAAAGTGCGATGTTGCCTATTaGAGCCTTCAGCTCATCTACCGTCGCTGCATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: THRRRGKCDVAY*SLQLIYRRCIL Trigger: AAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149547.2 |
||
| CDS TCA 72 bp | CACCACAGGCGAAGGGGAAAGTGCGATGTTGCCTATTaGAGCCTTCAGCTCATCTACCGTCGCTGCATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HHRRRGKCDVAY*SLQLIYRRCIL Trigger: AAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS GCA 72 bp | GACTTTTCCTCACAGGCGAAGGGGAAAGTGCGATGTTaGCTATTGAAGCCTTCAGCTCATCTACCGTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DFSSQAKGKVRC*LLKPSAHLPSL Trigger: CAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGAGGAAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS GCA 72 bp | TTATCACAGCAGAGAAGTTGGGGGTTCGGCAGGACGTaGTCTAACCTGCTGGAATTTACCACCCGGAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSQQRSWGFGRT*SNLLEFTTRKV Trigger: GACTTTCCGGGTGGTAAATTCCAGCAGGTTAGAGCACGTCCTGCCGAACCCCCAACTTCTCTGCTGTGATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS GCA 72 bp | TATGGGGACCAGGAACTGCACGTTGTTGAGGGCCACTaGAGTGGACATGGCATCCGTGTTGTACTTATAGTC | + |
|
Preference number: 6 (lower is better) Translates to: YGDQELHVVEGH*SGHGIRVVLIV Trigger: GACTATAAGTACAACACGGATGCCATGTCCACTGCAGTGGCCCTCAACAACGTGCAGTTCCTGGTCCCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS GCA 72 bp | ACTTCTTCACCACAGGCGAAGGGGAAAGTGCGATGTTaGCTATTGAAGCCTTCAGCTCATCTACCGTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TSSPQAKGKVRC*LLKPSAHLPSL Trigger: CAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGTGAAGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS CCA 72 bp | GTCATCCAGAGGCTTCTTGCTTGTAAGTTCTGGAGTTaGGGTGGAACGCCTGGGTCTTGCAACTTCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: VIQRLLACKFWS*GGTPGSCNFFT Trigger: GGTGAAGAAGTTGCAAGACCCAGGCGTTCCACCCCAACTCCAGAACTTACAAGCAAGAAGCCTCTGGATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS CAA 72 bp | TCCTCACAGGCGAAGGGGAAAGTGCGATGTTGCCTATaGAAGCCTTCAGCTCATCTACCGTCGCTGCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSQAKGKVRCCL*KPSAHLPSLHS Trigger: AGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CAA 72 bp | GGACTTTTCCTCACAGGCGAAGGGGAAAGTGCGATGTaGCCTATTGAAGCCTTCAGCTCATCTACCGTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLFLTGEGESAM*PIEAFSSSTVA Trigger: AGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGAGGAAAAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS CAA 72 bp | TCACCACAGGCGAAGGGGAAAGTGCGATGTTGCCTATaGAAGCCTTCAGCTCATCTACCGTCGCTGCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPQAKGKVRCCL*KPSAHLPSLHS Trigger: AGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS CAA 90 bp | TCGGACTTTTCCTCACAGGCGAAGGGGAAAGTGCGATGTTGCCTATaGAAGCCTTCAGCTCATCTACCGTCGCTGCATTCTTCAGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: SDFSSQAKGKVRCCL*KPSAHLPSLHSSGR Trigger: ACGTCCTGAAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGAGGAAAAGTCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS CAA 90 bp | CTGGAATTTACCACCCGGAAAGTCAGAGCTGCTGGGGATGGGTTGTaGGCAAAGTGTCTGGTGATACCAGCAGGGAAGGACAACACCATT | + |
|
Preference number: 6 (lower is better) Translates to: LEFTTRKVRAAGDGL*AKCLVIPAGKDNTI Trigger: AATGGTGTTGTCCTTCCCTGCTGGTATCACCAGACACTTTGCCAACAACCCATCCCCAGCAGCTCTGACTTTCCGGGTGGTAAATTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CAA 90 bp | GCAACTTCTTCACCACAGGCGAAGGGGAAAGTGCGATGTTGCCTATaGAAGCCTTCAGCTCATCTACCGTCGCTGCATTCTTCAGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: ATSSPQAKGKVRCCL*KPSAHLPSLHSSGR Trigger: ACGTCCTGAAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGTGAAGAAGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS CAA 90 bp | GGGTCTTGCAACTTCTTCACCACAGGCGAAGGGGAAAGTGCGATGTaGCCTATTGAAGCCTTCAGCTCATCTACCGTCGCTGCATTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GSCNFFTTGEGESAM*PIEAFSSSTVAAFF Trigger: GAAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGTGAAGAAGTTGCAAGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS CAA 90 bp | TTAATGAAGGTCTGCTCAGCAACTTTCTTCTGGACTTCTTCTAAATaGAGCGGAGATGGTACATGGCGAGGACCAGGAGGCCCTGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LMKVCSATFFWTSSK*SGDGTWRGPGGPGG Trigger: TCCCCCAGGGCCTCCTGGTCCTCGCCATGTACCATCTCCGCTCAATTTAGAAGAAGTCCAGAAGAAAGTTGCTGAGCAGACCTTCATTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS TCA 72 bp | TCTGCTCAGCAACTTTCTTCTGGACTTCTTCTAAATTaGGCGGAGATGGTACATGGCGAGGACCAGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SAQQLSSGLLLN*AEMVHGEDQEA Trigger: GGCCTCCTGGTCCTCGCCATGTACCATCTCCGCTCAATTTAGAAGAAGTCCAGAAGAAAGTTGCTGAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CCA 72 bp | GTCATCCAGAGGCTTCTTGCTTGTAAGTTCTGGAGTTaGGGTGGAACGCCTGGGTCTTGCAACTTCTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: VIQRLLACKFWS*GGTPGSCNFFT Trigger: AGTGAAGAAGTTGCAAGACCCAGGCGTTCCACCCCAACTCCAGAACTTACAAGCAAGAAGCCTCTGGATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CAA 72 bp | TTAATTGCACCCACAGGCGAAGGGGAAAGTGCGATGTaGCCTATTGAAGCCTTCAGCTCATCTACCGTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LIAPTGEGESAM*PIEAFSSSTVA Trigger: AGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGGTGCAATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149547.2 |
||
| CDS CAA 72 bp | AACTTCTTCACCACAGGCGAAGGGGAAAGTGCGATGTaGCCTATTGAAGCCTTCAGCTCATCTACCGTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: NFFTTGEGESAM*PIEAFSSSTVA Trigger: AGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGTGAAGAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183855.8 |
||
| CDS TCA 72 bp | GCGACAACACTGGCCCAAAAATGCTGTCCAGGTCACTaGTGGATGGTAGTTTCTCAATTTTGGCCTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ATTLAQKCCPGH*WMVVSQFWPLW Trigger: CCACAGAGGCCAAAATTGAGAAACTACCATCCATCAGTGACCTGGACAGCATTTTTGGGCCAGTGTTGTCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CAA 72 bp | TGGACCCACTTCTCTTCAGTATTAACAGCAACAGACTaGGGCGACAACACTGGCCCAAAAATGCTGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: WTHFSSVLTATD*GDNTGPKMLSR Trigger: CCTGGACAGCATTTTTGGGCCAGTGTTGTCGCCCAAGTCTGTTGCTGTTAATACTGAAGAGAAGTGGGTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CAA 90 bp | AAGTTCCTTTTAATTGCACCCACAGGCGAAGGGGAAAGTGCGATGTaGCCTATTGAAGCCTTCAGCTCATCTACCGTCGCTGCATTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: KFLLIAPTGEGESAM*PIEAFSSSTVAAFF Trigger: GAAGAATGCAGCGACGGTAGATGAGCTGAAGGCTTCAATAGGCAACATCGCACTTTCCCCTTCGCCTGTGGGTGCAATTAAAAGGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149547.2 |
||
| CDS CCA 72 bp | TTCAGTATTAACAGCAACAGACTTGGGCGACAACACTaGCCCAAAAATGCTGTCCAGGTCACTGATGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: FSINSNRLGRQH*PKNAVQVTDGW Trigger: CCATCCATCAGTGACCTGGACAGCATTTTTGGGCCAGTGTTGTCGCCCAAGTCTGTTGCTGTTAATACTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CAA 90 bp | TCAGAAAAATGGACCCACTTCTCTTCAGTATTAACAGCAACAGACTaGGGCGACAACACTGGCCCAAAAATGCTGTCCAGGTCACTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SEKWTHFSSVLTATD*GDNTGPKMLSRSLM Trigger: CATCAGTGACCTGGACAGCATTTTTGGGCCAGTGTTGTCGCCCAAGTCTGTTGCTGTTAATACTGAAGAGAAGTGGGTCCATTTTTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS GCA 72 bp | CCTTGGAGTCAACTCTGGAGTAACATGTTCCGGGGATaGATCAGAAAAATGGACCCACTTCTCTTCAGTATT | + |
|
Preference number: 6 (lower is better) Translates to: PWSQLWSNMFRG*IRKMDPLLFSI Trigger: AATACTGAAGAGAAGTGGGTCCATTTTTCTGATGCATCCCCGGAACATGTTACTCCAGAGTTGACTCCAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS CAA 90 bp | CTTCAGCTCATCTACCGTCGCTGCATTCTTCAGGACGTCCTTAGATaGCAAGGGTTTAATCTTGATGTTGAATTTCTTGTGCGACTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LQLIYRRCILQDVLR*QGFNLDVEFLVRLF Trigger: GAAGAGTCGCACAAGAAATTCAACATCAAGATTAAACCCTTGCAATCTAAGGACGTCCTGAAGAATGCAGCGACGGTAGATGAGCTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 ENSMUST00000183855.8 |
||
| CDS TCA 72 bp | CAAGTACTTTCCTGCAGCAAACCTCTTCTTAATGAGTaGAAACCGGTAGCCTGCTCCAACAAGTTCAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: QVLSCSKPLLNE*KPVACSNKFNV Trigger: GACATTGAACTTGTTGGAGCAGGCTACCGGTTTTCACTCATTAAGAAGAGGTTTGCTGCAGGAAAGTACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
||
| CDS CCA 72 bp | TCTGGAGTAACATGTTCCGGGGATGCATCAGAAAAATaGACCCACTTCTCTTCAGTATTAACAGCAACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SGVTCSGDASEK*THFSSVLTATD Trigger: GTCTGTTGCTGTTAATACTGAAGAGAAGTGGGTCCATTTTTCTGATGCATCCCCGGAACATGTTACTCCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
||
| CDS GCA 72 bp | TCTACCGTCGCTGCATTCTTCAGGACGTCCTTAGATTaGAAGGGTTTAATCTTGATGTTGAATTTCTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: STVAAFFRTSLD*KGLILMLNFLC Trigger: GCACAAGAAATTCAACATCAAGATTAAACCCTTGCAATCTAAGGACGTCCTGAAGAATGCAGCGACGGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 ENSMUST00000183855.8 |
||
| CDS GCA 72 bp | TCTTTCCCAATCGATTTCTGCATAAAATCCATTTGGTaGCCCATTGCTTTTCTTCATTCCATCTCGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SFPIDFCIKSIW*PIAFLHSISVW Trigger: CCAGACCGAGATGGAATGAAGAAAAGCAATGGGGCACCAAATGGATTTTATGCAGAAATCGATTGGGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156596.8 |
||
| CDS CAA 72 bp | CATGTTTACCCAGAATTCCTTGGTATTGGCATCATTTaGTGTATTATCACAGCAGAGAAGTTGGGGGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: HVYPEFLGIGII*CIITAEKLGVR Trigger: CCGAACCCCCAACTTCTCTGCTGTGATAATACACAAAATGATGCCAATACCAAGGAATTCTGGGTAAACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS CCA 72 bp | GCCAGTAAAGAACCTACGCCTCCATTTTCTGACTTCTaGGAGATATCGGGAATCTTCCATAATATTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: ASKEPTPPFSDF*EISGIFHNILC Trigger: ACAAAGAATATTATGGAAGATTCCCGATATCTCCCAGAAGTCAGAAAATGGAGGCGTAGGTTCTTTACTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS CCA 72 bp | TCATCTTTAATGAAGGTCTGCTCAGCAACTTTCTTCTaGACTTCTTCTAAATTGAGCGGAGATGGTACATGG | + |
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Preference number: 6 (lower is better) Translates to: SSLMKVCSATFF*TSSKLSGDGTW Trigger: CCATGTACCATCTCCGCTCAATTTAGAAGAAGTCCAGAAGAAAGTTGCTGAGCAGACCTTCATTAAAGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080728.13 ENSMUST00000106882.9 |
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| CDS CAA 72 bp | ATCTACCGTCGCTGCATTCTTCAGGACGTCCTTAGATaGCAAGGGTTTAATCTTGATGTTGAATTTCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: IYRRCILQDVLR*QGFNLDVEFLV Trigger: CACAAGAAATTCAACATCAAGATTAAACCCTTGCAATCTAAGGACGTCCTGAAGAATGCAGCGACGGTAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 ENSMUST00000183855.8 |
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| CDS CAA 90 bp | GCATTCTTCAGGACGTCCTTAGATTGCAAGGGTTTAATCTTGATGTaGAATTTCTTGTGCGACTCTTCTTCCTCTTCAGATTCACTTGAG | + |
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Preference number: 6 (lower is better) Translates to: AFFRTSLDCKGLILM*NFLCDSSSSSDSLE Trigger: CTCAAGTGAATCTGAAGAGGAAGAAGAGTCGCACAAGAAATTCAACATCAAGATTAAACCCTTGCAATCTAAGGACGTCCTGAAGAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 ENSMUST00000183855.8 |
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| CDS CAA 72 bp | AGGACGTCCTTAGATTGCAAGGGTTTAATCTTGATGTaGAATTTCTTGTGCGACTCTTCTTCCTCTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: RTSLDCKGLILM*NFLCDSSSSSD Trigger: ATCTGAAGAGGAAGAAGAGTCGCACAAGAAATTCAACATCAAGATTAAACCCTTGCAATCTAAGGACGTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 ENSMUST00000183855.8 |
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| CDS GCA 72 bp | GATTGCAAGGGTTTAATCTTGATGTTGAATTTCTTGTaGGACTCTTCTTCCTCTTCAGATTCACTTGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: DCKGLILMLNFL*DSSSSSDSLEE Trigger: TTCCTCAAGTGAATCTGAAGAGGAAGAAGAGTCGCACAAGAAATTCAACATCAAGATTAAACCCTTGCAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 ENSMUST00000183855.8 |
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| CDS CCA 72 bp | GAGTCATCAAATTTGGCATGTTTACCCAGAATTCCTTaGTATTGGCATCATTTTGTGTATTATCACAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ESSNLACLPRIP*YWHHFVYYHSR Trigger: TCTGCTGTGATAATACACAAAATGATGCCAATACCAAGGAATTCTGGGTAAACATGCCAAATTTGATGACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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| CDS CAA 72 bp | TTTGTTCAGAGACTTTCTTTAGGTGAGTCATCAAATTaGGCATGTTTACCCAGAATTCCTTGGTATTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FVQRLSLGESSN*ACLPRIPWYWH Trigger: ATGCCAATACCAAGGAATTCTGGGTAAACATGCCAAATTTGATGACTCACCTAAAGAAAGTCTCTGAACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066824.14 ENSMUST00000072481.12 ENSMUST00000080728.13 ENSMUST00000106882.9 ENSMUST00000149547.2 |
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